BLASTX nr result

ID: Papaver29_contig00011877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00011877
         (2890 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KDO52332.1| hypothetical protein CISIN_1g000769mg [Citrus sin...   221   2e-54
gb|KDO52331.1| hypothetical protein CISIN_1g000769mg [Citrus sin...   221   2e-54
gb|KDO52330.1| hypothetical protein CISIN_1g000769mg [Citrus sin...   221   2e-54
gb|KDO52329.1| hypothetical protein CISIN_1g000769mg [Citrus sin...   221   2e-54
ref|XP_006427497.1| hypothetical protein CICLE_v10024717mg [Citr...   221   2e-54
ref|XP_006427496.1| hypothetical protein CICLE_v10024717mg [Citr...   221   2e-54
gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]                  221   3e-54
ref|XP_009348724.1| PREDICTED: mediator of RNA polymerase II tra...   221   4e-54
ref|XP_006465238.1| PREDICTED: mediator of RNA polymerase II tra...   220   5e-54
ref|XP_006465237.1| PREDICTED: mediator of RNA polymerase II tra...   220   5e-54
ref|XP_007208137.1| hypothetical protein PRUPE_ppa000277mg [Prun...   218   3e-53
ref|XP_012444230.1| PREDICTED: mediator of RNA polymerase II tra...   217   4e-53
gb|KJB56578.1| hypothetical protein B456_009G126200 [Gossypium r...   217   4e-53
ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...   216   1e-52
ref|XP_008366117.1| PREDICTED: LOW QUALITY PROTEIN: mediator of ...   214   5e-52
ref|XP_010658921.1| PREDICTED: mediator of RNA polymerase II tra...   211   4e-51
ref|XP_007023336.1| Uncharacterized protein TCM_027316 [Theobrom...   207   3e-50
ref|XP_004486632.1| PREDICTED: mediator of RNA polymerase II tra...   205   2e-49
ref|XP_009367255.1| PREDICTED: mediator of RNA polymerase II tra...   202   1e-48
ref|XP_009770214.1| PREDICTED: mediator of RNA polymerase II tra...   201   4e-48

>gb|KDO52332.1| hypothetical protein CISIN_1g000769mg [Citrus sinensis]
          Length = 1197

 Score =  221 bits (564), Expect = 2e-54
 Identities = 215/738 (29%), Positives = 316/738 (42%), Gaps = 13/738 (1%)
 Frame = -2

Query: 2256 QQPCMQMSSGLQPSQSTLQQAQ---PSVMQSSS--GLQQNPQSAVAQSTTNALQQHPQSV 2092
            QQP +   + LQ SQ +  Q     P++MQS+   GLQQN QS+V QST   +QQHPQSV
Sbjct: 159  QQPNLLQPNQLQSSQQSGMQTSSVMPNMMQSAPLPGLQQNQQSSVQQSTQPMMQQHPQSV 218

Query: 2091 LRXXXXXXXXXXXXQAXXXXXXXXXXXXXXXXQKINASNLQQHPQQKINSPNLQQHQLIG 1912
            LR            Q                         QQ   Q+ N+ N+QQ QLIG
Sbjct: 219  LRPQQQQQQTVGIHQQQTPMPQQSVMPP-------QQQQQQQLMGQQPNTVNMQQSQLIG 271

Query: 1911 XXXXXXXXXXXXXXXXXXXXNVTNLPQYLLGNQQQLCQQSNMSGLQKQQQQPIYTMHXXX 1732
                                 V ++ Q     Q+ L QQSN+  LQ+QQQQ         
Sbjct: 272  QQNN-----------------VGDMQQ----QQRLLGQQSNLPNLQQQQQQ--------- 301

Query: 1731 XXXXXXXXXQLSTNMLQIQGKHAQSHPAQQQLMSQHPSXXXXXXXXXXXXXQPNSLQRDM 1552
                              Q +  Q    QQQLM+Q                         
Sbjct: 302  ------------------QQQQQQQQQQQQQLMAQQNL---------------------- 321

Query: 1551 QQRIQTSGGSMLNHQSLLDQKQVFHSQRPPPE------ASSKEWQTSVVPAIXXXXXXXX 1390
                     S ++HQ L  Q  V   Q+ P +      + +   QT+  PA         
Sbjct: 322  ---------SSMHHQQLGPQSNVSGLQQQPQQQLLGTQSGNSSMQTNQHPA----HMLQQ 368

Query: 1389 XAVDVQEEVYQTIKSMREKYLPDLCHMHQKIAQKRQQHDSLPHPPKSEQTERLKIFKNML 1210
              V VQ+++ Q+  ++    LP+     Q   Q++Q    +   P   Q +         
Sbjct: 369  PKVPVQQQMQQSAPNL----LPNQGQQQQSQPQQQQMMSQIQSQPTQLQQQL-------- 416

Query: 1209 DKMIGFLNLPKSSMIPGLKDKLASYEKQILNILNSNRSWNPGLLQQQIQPTGGHTLSIXX 1030
                            GL+ +    ++ +   L ++   +  LLQ Q      + +    
Sbjct: 417  ----------------GLQQQPNPLQRDMQQRLQASGQASASLLQPQ------NVMDQQK 454

Query: 1029 XXXXXXXXXQVPSSTSIDXXXXXXXXXXXNVVDQQKEVYQTIKSMREKYLPELSDMHQRI 850
                        SSTS+D             VD Q+EVYQ IK+M+E YLPEL++M+Q+I
Sbjct: 455  QLYQPQRALPETSSTSLDSTHQTGQANG---VDWQEEVYQKIKTMKEMYLPELNEMYQKI 511

Query: 849  SQKCQQHDSLPRPPKCEQHERLRIFKNMLDKMIGFLNLPKSFMIPSLKDKLASYEKQILN 670
            + K QQHDSLP+ PK +Q E+L+IFK ML+++I FL + KS ++P  K+KL SYEKQI+N
Sbjct: 512  AAKLQQHDSLPQQPKSDQLEKLKIFKTMLERIITFLQVSKSNILPGFKEKLGSYEKQIVN 571

Query: 669  ILNTNRPRKS-DPLQQQIQPTGDHPLSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 493
             ++TNRPRK    +QQQ Q    H  S+                                
Sbjct: 572  FISTNRPRKPVSSMQQQGQLPPTHMHSMQQQQSQISQG---------------------- 609

Query: 492  XXXXXXXXXXXXXXQNPLLKQYENLINSHMQPTDLQNSVLSTQPTAMTSMNHGSLPPNHV 313
                               + ++N +NS +Q  +L  S+++ QP  +T++ H S+P +  
Sbjct: 610  -------------------QPHDNQMNSQIQSMNLAGSMVTMQPNNVTNVQHNSVP-SVS 649

Query: 312  GVTTAQSNLLNSLQPGSIMMLGQGDNSVSLQLVCVGATLQYQSAGNALQQGNLNTM-SQS 136
            GV+T+Q N+LNS+QPG  M  GQG +  S+  V  G+    Q++ +A QQ ++N + SQS
Sbjct: 650  GVSTSQQNMLNSVQPGPNMDSGQGTSLSSMHQVNAGSL--QQNSVSAPQQASINNLPSQS 707

Query: 135  TVNGLQSNVNSLQMNPDM 82
             VN LQSN+N+LQ N +M
Sbjct: 708  GVNMLQSNINALQSNSNM 725



 Score = 70.9 bits (172), Expect = 6e-09
 Identities = 50/104 (48%), Positives = 64/104 (61%), Gaps = 4/104 (3%)
 Frame = -2

Query: 2751 MQSQVRNPGQS-QIPLE-NQYEARQQLLSQNIQKNIGNSGIHESVEFSSALPSGDSLNQS 2578
            MQ+QV N GQS  IPL  NQ + RQQLLSQNIQ N+ ++G+  S   SSALPS   L+QS
Sbjct: 1    MQNQVHNQGQSLPIPLSANQSQVRQQLLSQNIQNNMLSAGVQGSSGLSSALPSVSGLSQS 60

Query: 2577 LMPNAVNQGSNIQ--SGVAXXXXXXXXXXXXVASYMFANSTRQL 2452
             +P+ V Q  N+Q  SG++            V S +FANS RQ+
Sbjct: 61   PIPSVVGQTVNMQNMSGIS-QNSGGNSMGQGVPSNLFANSQRQI 103


>gb|KDO52331.1| hypothetical protein CISIN_1g000769mg [Citrus sinensis]
          Length = 1294

 Score =  221 bits (564), Expect = 2e-54
 Identities = 215/738 (29%), Positives = 316/738 (42%), Gaps = 13/738 (1%)
 Frame = -2

Query: 2256 QQPCMQMSSGLQPSQSTLQQAQ---PSVMQSSS--GLQQNPQSAVAQSTTNALQQHPQSV 2092
            QQP +   + LQ SQ +  Q     P++MQS+   GLQQN QS+V QST   +QQHPQSV
Sbjct: 159  QQPNLLQPNQLQSSQQSGMQTSSVMPNMMQSAPLPGLQQNQQSSVQQSTQPMMQQHPQSV 218

Query: 2091 LRXXXXXXXXXXXXQAXXXXXXXXXXXXXXXXQKINASNLQQHPQQKINSPNLQQHQLIG 1912
            LR            Q                         QQ   Q+ N+ N+QQ QLIG
Sbjct: 219  LRPQQQQQQTVGIHQQQTPMPQQSVMPP-------QQQQQQQLMGQQPNTVNMQQSQLIG 271

Query: 1911 XXXXXXXXXXXXXXXXXXXXNVTNLPQYLLGNQQQLCQQSNMSGLQKQQQQPIYTMHXXX 1732
                                 V ++ Q     Q+ L QQSN+  LQ+QQQQ         
Sbjct: 272  QQNN-----------------VGDMQQ----QQRLLGQQSNLPNLQQQQQQ--------- 301

Query: 1731 XXXXXXXXXQLSTNMLQIQGKHAQSHPAQQQLMSQHPSXXXXXXXXXXXXXQPNSLQRDM 1552
                              Q +  Q    QQQLM+Q                         
Sbjct: 302  ------------------QQQQQQQQQQQQQLMAQQNL---------------------- 321

Query: 1551 QQRIQTSGGSMLNHQSLLDQKQVFHSQRPPPE------ASSKEWQTSVVPAIXXXXXXXX 1390
                     S ++HQ L  Q  V   Q+ P +      + +   QT+  PA         
Sbjct: 322  ---------SSMHHQQLGPQSNVSGLQQQPQQQLLGTQSGNSSMQTNQHPA----HMLQQ 368

Query: 1389 XAVDVQEEVYQTIKSMREKYLPDLCHMHQKIAQKRQQHDSLPHPPKSEQTERLKIFKNML 1210
              V VQ+++ Q+  ++    LP+     Q   Q++Q    +   P   Q +         
Sbjct: 369  PKVPVQQQMQQSAPNL----LPNQGQQQQSQPQQQQMMSQIQSQPTQLQQQL-------- 416

Query: 1209 DKMIGFLNLPKSSMIPGLKDKLASYEKQILNILNSNRSWNPGLLQQQIQPTGGHTLSIXX 1030
                            GL+ +    ++ +   L ++   +  LLQ Q      + +    
Sbjct: 417  ----------------GLQQQPNPLQRDMQQRLQASGQASASLLQPQ------NVMDQQK 454

Query: 1029 XXXXXXXXXQVPSSTSIDXXXXXXXXXXXNVVDQQKEVYQTIKSMREKYLPELSDMHQRI 850
                        SSTS+D             VD Q+EVYQ IK+M+E YLPEL++M+Q+I
Sbjct: 455  QLYQPQRALPETSSTSLDSTHQTGQANG---VDWQEEVYQKIKTMKEMYLPELNEMYQKI 511

Query: 849  SQKCQQHDSLPRPPKCEQHERLRIFKNMLDKMIGFLNLPKSFMIPSLKDKLASYEKQILN 670
            + K QQHDSLP+ PK +Q E+L+IFK ML+++I FL + KS ++P  K+KL SYEKQI+N
Sbjct: 512  AAKLQQHDSLPQQPKSDQLEKLKIFKTMLERIITFLQVSKSNILPGFKEKLGSYEKQIVN 571

Query: 669  ILNTNRPRKS-DPLQQQIQPTGDHPLSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 493
             ++TNRPRK    +QQQ Q    H  S+                                
Sbjct: 572  FISTNRPRKPVSSMQQQGQLPPTHMHSMQQQQSQISQG---------------------- 609

Query: 492  XXXXXXXXXXXXXXQNPLLKQYENLINSHMQPTDLQNSVLSTQPTAMTSMNHGSLPPNHV 313
                               + ++N +NS +Q  +L  S+++ QP  +T++ H S+P +  
Sbjct: 610  -------------------QPHDNQMNSQIQSMNLAGSMVTMQPNNVTNVQHNSVP-SVS 649

Query: 312  GVTTAQSNLLNSLQPGSIMMLGQGDNSVSLQLVCVGATLQYQSAGNALQQGNLNTM-SQS 136
            GV+T+Q N+LNS+QPG  M  GQG +  S+  V  G+    Q++ +A QQ ++N + SQS
Sbjct: 650  GVSTSQQNMLNSVQPGPNMDSGQGTSLSSMHQVNAGSL--QQNSVSAPQQASINNLPSQS 707

Query: 135  TVNGLQSNVNSLQMNPDM 82
             VN LQSN+N+LQ N +M
Sbjct: 708  GVNMLQSNINALQSNSNM 725



 Score = 70.9 bits (172), Expect = 6e-09
 Identities = 50/104 (48%), Positives = 64/104 (61%), Gaps = 4/104 (3%)
 Frame = -2

Query: 2751 MQSQVRNPGQS-QIPLE-NQYEARQQLLSQNIQKNIGNSGIHESVEFSSALPSGDSLNQS 2578
            MQ+QV N GQS  IPL  NQ + RQQLLSQNIQ N+ ++G+  S   SSALPS   L+QS
Sbjct: 1    MQNQVHNQGQSLPIPLSANQSQVRQQLLSQNIQNNMLSAGVQGSSGLSSALPSVSGLSQS 60

Query: 2577 LMPNAVNQGSNIQ--SGVAXXXXXXXXXXXXVASYMFANSTRQL 2452
             +P+ V Q  N+Q  SG++            V S +FANS RQ+
Sbjct: 61   PIPSVVGQTVNMQNMSGIS-QNSGGNSMGQGVPSNLFANSQRQI 103


>gb|KDO52330.1| hypothetical protein CISIN_1g000769mg [Citrus sinensis]
          Length = 1265

 Score =  221 bits (564), Expect = 2e-54
 Identities = 215/738 (29%), Positives = 316/738 (42%), Gaps = 13/738 (1%)
 Frame = -2

Query: 2256 QQPCMQMSSGLQPSQSTLQQAQ---PSVMQSSS--GLQQNPQSAVAQSTTNALQQHPQSV 2092
            QQP +   + LQ SQ +  Q     P++MQS+   GLQQN QS+V QST   +QQHPQSV
Sbjct: 159  QQPNLLQPNQLQSSQQSGMQTSSVMPNMMQSAPLPGLQQNQQSSVQQSTQPMMQQHPQSV 218

Query: 2091 LRXXXXXXXXXXXXQAXXXXXXXXXXXXXXXXQKINASNLQQHPQQKINSPNLQQHQLIG 1912
            LR            Q                         QQ   Q+ N+ N+QQ QLIG
Sbjct: 219  LRPQQQQQQTVGIHQQQTPMPQQSVMPP-------QQQQQQQLMGQQPNTVNMQQSQLIG 271

Query: 1911 XXXXXXXXXXXXXXXXXXXXNVTNLPQYLLGNQQQLCQQSNMSGLQKQQQQPIYTMHXXX 1732
                                 V ++ Q     Q+ L QQSN+  LQ+QQQQ         
Sbjct: 272  QQNN-----------------VGDMQQ----QQRLLGQQSNLPNLQQQQQQ--------- 301

Query: 1731 XXXXXXXXXQLSTNMLQIQGKHAQSHPAQQQLMSQHPSXXXXXXXXXXXXXQPNSLQRDM 1552
                              Q +  Q    QQQLM+Q                         
Sbjct: 302  ------------------QQQQQQQQQQQQQLMAQQNL---------------------- 321

Query: 1551 QQRIQTSGGSMLNHQSLLDQKQVFHSQRPPPE------ASSKEWQTSVVPAIXXXXXXXX 1390
                     S ++HQ L  Q  V   Q+ P +      + +   QT+  PA         
Sbjct: 322  ---------SSMHHQQLGPQSNVSGLQQQPQQQLLGTQSGNSSMQTNQHPA----HMLQQ 368

Query: 1389 XAVDVQEEVYQTIKSMREKYLPDLCHMHQKIAQKRQQHDSLPHPPKSEQTERLKIFKNML 1210
              V VQ+++ Q+  ++    LP+     Q   Q++Q    +   P   Q +         
Sbjct: 369  PKVPVQQQMQQSAPNL----LPNQGQQQQSQPQQQQMMSQIQSQPTQLQQQL-------- 416

Query: 1209 DKMIGFLNLPKSSMIPGLKDKLASYEKQILNILNSNRSWNPGLLQQQIQPTGGHTLSIXX 1030
                            GL+ +    ++ +   L ++   +  LLQ Q      + +    
Sbjct: 417  ----------------GLQQQPNPLQRDMQQRLQASGQASASLLQPQ------NVMDQQK 454

Query: 1029 XXXXXXXXXQVPSSTSIDXXXXXXXXXXXNVVDQQKEVYQTIKSMREKYLPELSDMHQRI 850
                        SSTS+D             VD Q+EVYQ IK+M+E YLPEL++M+Q+I
Sbjct: 455  QLYQPQRALPETSSTSLDSTHQTGQANG---VDWQEEVYQKIKTMKEMYLPELNEMYQKI 511

Query: 849  SQKCQQHDSLPRPPKCEQHERLRIFKNMLDKMIGFLNLPKSFMIPSLKDKLASYEKQILN 670
            + K QQHDSLP+ PK +Q E+L+IFK ML+++I FL + KS ++P  K+KL SYEKQI+N
Sbjct: 512  AAKLQQHDSLPQQPKSDQLEKLKIFKTMLERIITFLQVSKSNILPGFKEKLGSYEKQIVN 571

Query: 669  ILNTNRPRKS-DPLQQQIQPTGDHPLSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 493
             ++TNRPRK    +QQQ Q    H  S+                                
Sbjct: 572  FISTNRPRKPVSSMQQQGQLPPTHMHSMQQQQSQISQG---------------------- 609

Query: 492  XXXXXXXXXXXXXXQNPLLKQYENLINSHMQPTDLQNSVLSTQPTAMTSMNHGSLPPNHV 313
                               + ++N +NS +Q  +L  S+++ QP  +T++ H S+P +  
Sbjct: 610  -------------------QPHDNQMNSQIQSMNLAGSMVTMQPNNVTNVQHNSVP-SVS 649

Query: 312  GVTTAQSNLLNSLQPGSIMMLGQGDNSVSLQLVCVGATLQYQSAGNALQQGNLNTM-SQS 136
            GV+T+Q N+LNS+QPG  M  GQG +  S+  V  G+    Q++ +A QQ ++N + SQS
Sbjct: 650  GVSTSQQNMLNSVQPGPNMDSGQGTSLSSMHQVNAGSL--QQNSVSAPQQASINNLPSQS 707

Query: 135  TVNGLQSNVNSLQMNPDM 82
             VN LQSN+N+LQ N +M
Sbjct: 708  GVNMLQSNINALQSNSNM 725



 Score = 70.9 bits (172), Expect = 6e-09
 Identities = 50/104 (48%), Positives = 64/104 (61%), Gaps = 4/104 (3%)
 Frame = -2

Query: 2751 MQSQVRNPGQS-QIPLE-NQYEARQQLLSQNIQKNIGNSGIHESVEFSSALPSGDSLNQS 2578
            MQ+QV N GQS  IPL  NQ + RQQLLSQNIQ N+ ++G+  S   SSALPS   L+QS
Sbjct: 1    MQNQVHNQGQSLPIPLSANQSQVRQQLLSQNIQNNMLSAGVQGSSGLSSALPSVSGLSQS 60

Query: 2577 LMPNAVNQGSNIQ--SGVAXXXXXXXXXXXXVASYMFANSTRQL 2452
             +P+ V Q  N+Q  SG++            V S +FANS RQ+
Sbjct: 61   PIPSVVGQTVNMQNMSGIS-QNSGGNSMGQGVPSNLFANSQRQI 103


>gb|KDO52329.1| hypothetical protein CISIN_1g000769mg [Citrus sinensis]
          Length = 1251

 Score =  221 bits (564), Expect = 2e-54
 Identities = 215/738 (29%), Positives = 316/738 (42%), Gaps = 13/738 (1%)
 Frame = -2

Query: 2256 QQPCMQMSSGLQPSQSTLQQAQ---PSVMQSSS--GLQQNPQSAVAQSTTNALQQHPQSV 2092
            QQP +   + LQ SQ +  Q     P++MQS+   GLQQN QS+V QST   +QQHPQSV
Sbjct: 159  QQPNLLQPNQLQSSQQSGMQTSSVMPNMMQSAPLPGLQQNQQSSVQQSTQPMMQQHPQSV 218

Query: 2091 LRXXXXXXXXXXXXQAXXXXXXXXXXXXXXXXQKINASNLQQHPQQKINSPNLQQHQLIG 1912
            LR            Q                         QQ   Q+ N+ N+QQ QLIG
Sbjct: 219  LRPQQQQQQTVGIHQQQTPMPQQSVMPP-------QQQQQQQLMGQQPNTVNMQQSQLIG 271

Query: 1911 XXXXXXXXXXXXXXXXXXXXNVTNLPQYLLGNQQQLCQQSNMSGLQKQQQQPIYTMHXXX 1732
                                 V ++ Q     Q+ L QQSN+  LQ+QQQQ         
Sbjct: 272  QQNN-----------------VGDMQQ----QQRLLGQQSNLPNLQQQQQQ--------- 301

Query: 1731 XXXXXXXXXQLSTNMLQIQGKHAQSHPAQQQLMSQHPSXXXXXXXXXXXXXQPNSLQRDM 1552
                              Q +  Q    QQQLM+Q                         
Sbjct: 302  ------------------QQQQQQQQQQQQQLMAQQNL---------------------- 321

Query: 1551 QQRIQTSGGSMLNHQSLLDQKQVFHSQRPPPE------ASSKEWQTSVVPAIXXXXXXXX 1390
                     S ++HQ L  Q  V   Q+ P +      + +   QT+  PA         
Sbjct: 322  ---------SSMHHQQLGPQSNVSGLQQQPQQQLLGTQSGNSSMQTNQHPA----HMLQQ 368

Query: 1389 XAVDVQEEVYQTIKSMREKYLPDLCHMHQKIAQKRQQHDSLPHPPKSEQTERLKIFKNML 1210
              V VQ+++ Q+  ++    LP+     Q   Q++Q    +   P   Q +         
Sbjct: 369  PKVPVQQQMQQSAPNL----LPNQGQQQQSQPQQQQMMSQIQSQPTQLQQQL-------- 416

Query: 1209 DKMIGFLNLPKSSMIPGLKDKLASYEKQILNILNSNRSWNPGLLQQQIQPTGGHTLSIXX 1030
                            GL+ +    ++ +   L ++   +  LLQ Q      + +    
Sbjct: 417  ----------------GLQQQPNPLQRDMQQRLQASGQASASLLQPQ------NVMDQQK 454

Query: 1029 XXXXXXXXXQVPSSTSIDXXXXXXXXXXXNVVDQQKEVYQTIKSMREKYLPELSDMHQRI 850
                        SSTS+D             VD Q+EVYQ IK+M+E YLPEL++M+Q+I
Sbjct: 455  QLYQPQRALPETSSTSLDSTHQTGQANG---VDWQEEVYQKIKTMKEMYLPELNEMYQKI 511

Query: 849  SQKCQQHDSLPRPPKCEQHERLRIFKNMLDKMIGFLNLPKSFMIPSLKDKLASYEKQILN 670
            + K QQHDSLP+ PK +Q E+L+IFK ML+++I FL + KS ++P  K+KL SYEKQI+N
Sbjct: 512  AAKLQQHDSLPQQPKSDQLEKLKIFKTMLERIITFLQVSKSNILPGFKEKLGSYEKQIVN 571

Query: 669  ILNTNRPRKS-DPLQQQIQPTGDHPLSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 493
             ++TNRPRK    +QQQ Q    H  S+                                
Sbjct: 572  FISTNRPRKPVSSMQQQGQLPPTHMHSMQQQQSQISQG---------------------- 609

Query: 492  XXXXXXXXXXXXXXQNPLLKQYENLINSHMQPTDLQNSVLSTQPTAMTSMNHGSLPPNHV 313
                               + ++N +NS +Q  +L  S+++ QP  +T++ H S+P +  
Sbjct: 610  -------------------QPHDNQMNSQIQSMNLAGSMVTMQPNNVTNVQHNSVP-SVS 649

Query: 312  GVTTAQSNLLNSLQPGSIMMLGQGDNSVSLQLVCVGATLQYQSAGNALQQGNLNTM-SQS 136
            GV+T+Q N+LNS+QPG  M  GQG +  S+  V  G+    Q++ +A QQ ++N + SQS
Sbjct: 650  GVSTSQQNMLNSVQPGPNMDSGQGTSLSSMHQVNAGSL--QQNSVSAPQQASINNLPSQS 707

Query: 135  TVNGLQSNVNSLQMNPDM 82
             VN LQSN+N+LQ N +M
Sbjct: 708  GVNMLQSNINALQSNSNM 725



 Score = 70.9 bits (172), Expect = 6e-09
 Identities = 50/104 (48%), Positives = 64/104 (61%), Gaps = 4/104 (3%)
 Frame = -2

Query: 2751 MQSQVRNPGQS-QIPLE-NQYEARQQLLSQNIQKNIGNSGIHESVEFSSALPSGDSLNQS 2578
            MQ+QV N GQS  IPL  NQ + RQQLLSQNIQ N+ ++G+  S   SSALPS   L+QS
Sbjct: 1    MQNQVHNQGQSLPIPLSANQSQVRQQLLSQNIQNNMLSAGVQGSSGLSSALPSVSGLSQS 60

Query: 2577 LMPNAVNQGSNIQ--SGVAXXXXXXXXXXXXVASYMFANSTRQL 2452
             +P+ V Q  N+Q  SG++            V S +FANS RQ+
Sbjct: 61   PIPSVVGQTVNMQNMSGIS-QNSGGNSMGQGVPSNLFANSQRQI 103


>ref|XP_006427497.1| hypothetical protein CICLE_v10024717mg [Citrus clementina]
            gi|557529487|gb|ESR40737.1| hypothetical protein
            CICLE_v10024717mg [Citrus clementina]
          Length = 1369

 Score =  221 bits (564), Expect = 2e-54
 Identities = 215/738 (29%), Positives = 316/738 (42%), Gaps = 13/738 (1%)
 Frame = -2

Query: 2256 QQPCMQMSSGLQPSQSTLQQAQ---PSVMQSSS--GLQQNPQSAVAQSTTNALQQHPQSV 2092
            QQP +   + LQ SQ +  Q     P++MQS+   GLQQN QS+V QST   +QQHPQSV
Sbjct: 276  QQPNLLQPNQLQSSQQSGMQTSSVMPNMMQSAPLPGLQQNQQSSVQQSTQPMMQQHPQSV 335

Query: 2091 LRXXXXXXXXXXXXQAXXXXXXXXXXXXXXXXQKINASNLQQHPQQKINSPNLQQHQLIG 1912
            LR            Q                         QQ   Q+ N+ N+QQ QLIG
Sbjct: 336  LRPQQQQQQTVGIHQQQTPMPQQSVMPP-------QQQQQQQLMGQQPNTVNMQQSQLIG 388

Query: 1911 XXXXXXXXXXXXXXXXXXXXNVTNLPQYLLGNQQQLCQQSNMSGLQKQQQQPIYTMHXXX 1732
                                 V ++ Q     Q+ L QQSN+  LQ+QQQQ         
Sbjct: 389  QQNN-----------------VGDMQQ----QQRLLGQQSNLPNLQQQQQQQ-------- 419

Query: 1731 XXXXXXXXXQLSTNMLQIQGKHAQSHPAQQQLMSQHPSXXXXXXXXXXXXXQPNSLQRDM 1552
                              Q +  Q    QQQLM+Q                         
Sbjct: 420  ------------------QQQQQQQQQQQQQLMAQQNL---------------------- 439

Query: 1551 QQRIQTSGGSMLNHQSLLDQKQVFHSQRPPPE------ASSKEWQTSVVPAIXXXXXXXX 1390
                     S ++HQ L  Q  V   Q+ P +      + +   QT+  PA         
Sbjct: 440  ---------SSMHHQQLGPQSNVSGLQQQPQQQLLGTQSGNSSMQTNQHPA----HMLQQ 486

Query: 1389 XAVDVQEEVYQTIKSMREKYLPDLCHMHQKIAQKRQQHDSLPHPPKSEQTERLKIFKNML 1210
              V VQ+++ Q+  ++    LP+     Q   Q++Q    +   P   Q +         
Sbjct: 487  PKVPVQQQMQQSAPNL----LPNQGQQQQSQPQQQQMMSQIQSQPTQLQQQL-------- 534

Query: 1209 DKMIGFLNLPKSSMIPGLKDKLASYEKQILNILNSNRSWNPGLLQQQIQPTGGHTLSIXX 1030
                            GL+ +    ++ +   L ++   +  LLQ Q      + +    
Sbjct: 535  ----------------GLQQQPNPLQRDMQQRLQASGQASASLLQPQ------NVMDQQK 572

Query: 1029 XXXXXXXXXQVPSSTSIDXXXXXXXXXXXNVVDQQKEVYQTIKSMREKYLPELSDMHQRI 850
                        SSTS+D             VD Q+EVYQ IK+M+E YLPEL++M+Q+I
Sbjct: 573  QLYQPQRALPETSSTSLDSTHQTGQANG---VDWQEEVYQKIKTMKEMYLPELNEMYQKI 629

Query: 849  SQKCQQHDSLPRPPKCEQHERLRIFKNMLDKMIGFLNLPKSFMIPSLKDKLASYEKQILN 670
            + K QQHDSLP+ PK +Q E+L+IFK ML+++I FL + KS ++P  K+KL SYEKQI+N
Sbjct: 630  AAKLQQHDSLPQQPKSDQLEKLKIFKTMLERIITFLQVSKSNILPGFKEKLGSYEKQIVN 689

Query: 669  ILNTNRPRKS-DPLQQQIQPTGDHPLSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 493
             ++TNRPRK    +QQQ Q    H  S+                                
Sbjct: 690  FISTNRPRKPVSSMQQQGQLPPTHMHSMQQQQSQISQG---------------------- 727

Query: 492  XXXXXXXXXXXXXXQNPLLKQYENLINSHMQPTDLQNSVLSTQPTAMTSMNHGSLPPNHV 313
                               + ++N +NS +Q  +L  S+++ QP  +T++ H S+P +  
Sbjct: 728  -------------------QPHDNQMNSQIQSMNLAGSMVTMQPNNVTNVQHNSVP-SVS 767

Query: 312  GVTTAQSNLLNSLQPGSIMMLGQGDNSVSLQLVCVGATLQYQSAGNALQQGNLNTM-SQS 136
            GV+T+Q N+LNS+QPG  M  GQG +  S+  V  G+    Q++ +A QQ ++N + SQS
Sbjct: 768  GVSTSQQNMLNSVQPGPNMDSGQGTSLSSMHQVNAGSL--QQNSVSAPQQASINNLPSQS 825

Query: 135  TVNGLQSNVNSLQMNPDM 82
             VN LQSN+N+LQ N +M
Sbjct: 826  GVNMLQSNINALQSNSNM 843



 Score =  114 bits (286), Expect = 4e-22
 Identities = 78/150 (52%), Positives = 96/150 (64%), Gaps = 4/150 (2%)
 Frame = -2

Query: 2889 QTDYLRKISLKMLTMETKSQTNGVANSLPLNTGGGSQNPQDPASHSMQSQVRNPGQS-QI 2713
            Q+DYLRKISLKML+ME+KSQ N + NSL  N  G S  P DP S  MQ+QV N GQS  I
Sbjct: 75   QSDYLRKISLKMLSMESKSQ-NAMPNSLQSNNPGSSNRPPDPGS--MQNQVHNQGQSLPI 131

Query: 2712 PLE-NQYEARQQLLSQNIQKNIGNSGIHESVEFSSALPSGDSLNQSLMPNAVNQGSNIQ- 2539
            PL  NQ + RQQLLSQNIQ N+ ++G+  S   SSALPS   L+QS +P+ V Q  N+Q 
Sbjct: 132  PLSANQSQVRQQLLSQNIQNNMLSAGVQGSSGLSSALPSVSGLSQSPIPSVVGQTVNMQN 191

Query: 2538 -SGVAXXXXXXXXXXXXVASYMFANSTRQL 2452
             SG++            V S +FANS RQ+
Sbjct: 192  MSGIS-QNSGGNSMGQGVPSNLFANSQRQI 220


>ref|XP_006427496.1| hypothetical protein CICLE_v10024717mg [Citrus clementina]
            gi|557529486|gb|ESR40736.1| hypothetical protein
            CICLE_v10024717mg [Citrus clementina]
          Length = 1383

 Score =  221 bits (564), Expect = 2e-54
 Identities = 215/738 (29%), Positives = 316/738 (42%), Gaps = 13/738 (1%)
 Frame = -2

Query: 2256 QQPCMQMSSGLQPSQSTLQQAQ---PSVMQSSS--GLQQNPQSAVAQSTTNALQQHPQSV 2092
            QQP +   + LQ SQ +  Q     P++MQS+   GLQQN QS+V QST   +QQHPQSV
Sbjct: 276  QQPNLLQPNQLQSSQQSGMQTSSVMPNMMQSAPLPGLQQNQQSSVQQSTQPMMQQHPQSV 335

Query: 2091 LRXXXXXXXXXXXXQAXXXXXXXXXXXXXXXXQKINASNLQQHPQQKINSPNLQQHQLIG 1912
            LR            Q                         QQ   Q+ N+ N+QQ QLIG
Sbjct: 336  LRPQQQQQQTVGIHQQQTPMPQQSVMPP-------QQQQQQQLMGQQPNTVNMQQSQLIG 388

Query: 1911 XXXXXXXXXXXXXXXXXXXXNVTNLPQYLLGNQQQLCQQSNMSGLQKQQQQPIYTMHXXX 1732
                                 V ++ Q     Q+ L QQSN+  LQ+QQQQ         
Sbjct: 389  QQNN-----------------VGDMQQ----QQRLLGQQSNLPNLQQQQQQQ-------- 419

Query: 1731 XXXXXXXXXQLSTNMLQIQGKHAQSHPAQQQLMSQHPSXXXXXXXXXXXXXQPNSLQRDM 1552
                              Q +  Q    QQQLM+Q                         
Sbjct: 420  ------------------QQQQQQQQQQQQQLMAQQNL---------------------- 439

Query: 1551 QQRIQTSGGSMLNHQSLLDQKQVFHSQRPPPE------ASSKEWQTSVVPAIXXXXXXXX 1390
                     S ++HQ L  Q  V   Q+ P +      + +   QT+  PA         
Sbjct: 440  ---------SSMHHQQLGPQSNVSGLQQQPQQQLLGTQSGNSSMQTNQHPA----HMLQQ 486

Query: 1389 XAVDVQEEVYQTIKSMREKYLPDLCHMHQKIAQKRQQHDSLPHPPKSEQTERLKIFKNML 1210
              V VQ+++ Q+  ++    LP+     Q   Q++Q    +   P   Q +         
Sbjct: 487  PKVPVQQQMQQSAPNL----LPNQGQQQQSQPQQQQMMSQIQSQPTQLQQQL-------- 534

Query: 1209 DKMIGFLNLPKSSMIPGLKDKLASYEKQILNILNSNRSWNPGLLQQQIQPTGGHTLSIXX 1030
                            GL+ +    ++ +   L ++   +  LLQ Q      + +    
Sbjct: 535  ----------------GLQQQPNPLQRDMQQRLQASGQASASLLQPQ------NVMDQQK 572

Query: 1029 XXXXXXXXXQVPSSTSIDXXXXXXXXXXXNVVDQQKEVYQTIKSMREKYLPELSDMHQRI 850
                        SSTS+D             VD Q+EVYQ IK+M+E YLPEL++M+Q+I
Sbjct: 573  QLYQPQRALPETSSTSLDSTHQTGQANG---VDWQEEVYQKIKTMKEMYLPELNEMYQKI 629

Query: 849  SQKCQQHDSLPRPPKCEQHERLRIFKNMLDKMIGFLNLPKSFMIPSLKDKLASYEKQILN 670
            + K QQHDSLP+ PK +Q E+L+IFK ML+++I FL + KS ++P  K+KL SYEKQI+N
Sbjct: 630  AAKLQQHDSLPQQPKSDQLEKLKIFKTMLERIITFLQVSKSNILPGFKEKLGSYEKQIVN 689

Query: 669  ILNTNRPRKS-DPLQQQIQPTGDHPLSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 493
             ++TNRPRK    +QQQ Q    H  S+                                
Sbjct: 690  FISTNRPRKPVSSMQQQGQLPPTHMHSMQQQQSQISQG---------------------- 727

Query: 492  XXXXXXXXXXXXXXQNPLLKQYENLINSHMQPTDLQNSVLSTQPTAMTSMNHGSLPPNHV 313
                               + ++N +NS +Q  +L  S+++ QP  +T++ H S+P +  
Sbjct: 728  -------------------QPHDNQMNSQIQSMNLAGSMVTMQPNNVTNVQHNSVP-SVS 767

Query: 312  GVTTAQSNLLNSLQPGSIMMLGQGDNSVSLQLVCVGATLQYQSAGNALQQGNLNTM-SQS 136
            GV+T+Q N+LNS+QPG  M  GQG +  S+  V  G+    Q++ +A QQ ++N + SQS
Sbjct: 768  GVSTSQQNMLNSVQPGPNMDSGQGTSLSSMHQVNAGSL--QQNSVSAPQQASINNLPSQS 825

Query: 135  TVNGLQSNVNSLQMNPDM 82
             VN LQSN+N+LQ N +M
Sbjct: 826  GVNMLQSNINALQSNSNM 843



 Score =  114 bits (286), Expect = 4e-22
 Identities = 78/150 (52%), Positives = 96/150 (64%), Gaps = 4/150 (2%)
 Frame = -2

Query: 2889 QTDYLRKISLKMLTMETKSQTNGVANSLPLNTGGGSQNPQDPASHSMQSQVRNPGQS-QI 2713
            Q+DYLRKISLKML+ME+KSQ N + NSL  N  G S  P DP S  MQ+QV N GQS  I
Sbjct: 75   QSDYLRKISLKMLSMESKSQ-NAMPNSLQSNNPGSSNRPPDPGS--MQNQVHNQGQSLPI 131

Query: 2712 PLE-NQYEARQQLLSQNIQKNIGNSGIHESVEFSSALPSGDSLNQSLMPNAVNQGSNIQ- 2539
            PL  NQ + RQQLLSQNIQ N+ ++G+  S   SSALPS   L+QS +P+ V Q  N+Q 
Sbjct: 132  PLSANQSQVRQQLLSQNIQNNMLSAGVQGSSGLSSALPSVSGLSQSPIPSVVGQTVNMQN 191

Query: 2538 -SGVAXXXXXXXXXXXXVASYMFANSTRQL 2452
             SG++            V S +FANS RQ+
Sbjct: 192  MSGIS-QNSGGNSMGQGVPSNLFANSQRQI 220


>gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]
          Length = 1405

 Score =  221 bits (563), Expect = 3e-54
 Identities = 174/457 (38%), Positives = 224/457 (49%), Gaps = 52/457 (11%)
 Frame = -2

Query: 2256 QQPCMQMSSGLQPSQSTLQQAQ---PSVMQSSS--GLQQNPQSAVAQSTTNALQQHPQSV 2092
            QQP +   + LQ SQ +  Q     P++MQS+S  GLQQN QS+V QST   +QQHPQSV
Sbjct: 291  QQPNLLQPNQLQSSQQSGMQTSSVMPNMMQSASLPGLQQNQQSSVQQSTQPMMQQHPQSV 350

Query: 2091 LRXXXXXXXXXXXXQAXXXXXXXXXXXXXXXXQKINASNLQQHPQQKINSPNLQQHQLIG 1912
            LR            Q                         QQ   Q+ N+ N+QQ QLIG
Sbjct: 351  LRPQQQQQQTVGIHQQQTPMPQQSVMPP-------QQQQQQQLMGQQPNTVNMQQSQLIG 403

Query: 1911 XXXXXXXXXXXXXXXXXXXXNVTNLP-----------------QYLLGNQ-------QQL 1804
                                  +NLP                 Q L+  Q       QQL
Sbjct: 404  QQNNVGDMQQQQRLLGQQ----SNLPNLQQQPQQQQQQQQQQQQQLMAQQNLSSMHHQQL 459

Query: 1803 CQQSNMSGLQKQQQQPIYT----------------MHXXXXXXXXXXXXQLSTNMLQIQG 1672
              QSN+SGLQ+Q QQ +                  M             Q + N+L  QG
Sbjct: 460  GPQSNVSGLQQQPQQQLLGTQSGNSSMQTNQHPAHMLQQPKVPLQQQMQQSAPNLLPNQG 519

Query: 1671 KHAQSHPAQQQLMSQHPSXXXXXXXXXXXXXQPNSLQRDMQQRIQTSG---GSMLNHQSL 1501
            +  QS P QQQ+MSQ  S             QPN LQRDMQQR+Q SG    S+L  Q++
Sbjct: 520  QQQQSQPQQQQMMSQIQSQPTQLQQQLGLQQQPNPLQRDMQQRLQASGQASASLLQPQNV 579

Query: 1500 LDQ-KQVFHSQRPPPEASSKEWQTSVVPAIXXXXXXXXXAVDVQEEVYQTIKSMREKYLP 1324
            +DQ KQ++  QR  PE SS    ++               VD QEEVYQ IKSM+E YLP
Sbjct: 580  MDQQKQLYQPQRALPETSSTSLDST-------HQTGQANGVDWQEEVYQKIKSMKEMYLP 632

Query: 1323 DLCHMHQKIAQKRQQHDSLPHPPKSEQTERLKIFKNMLDKMIGFLNLPKSSMIPGLKDKL 1144
            +L  M+QKIA K QQHDSLP  PKS+Q E+LKIFK ML+++I FL + KS+++P  K+KL
Sbjct: 633  ELNEMYQKIAAKLQQHDSLPQQPKSDQLEKLKIFKTMLERIISFLQVSKSNILPSFKEKL 692

Query: 1143 ASYEKQILNILNSNRSWNP-GLLQQ--QIQPTGGHTL 1042
             SYEKQI+N +++NR   P   +QQ  Q+ PT  H++
Sbjct: 693  GSYEKQIVNFISTNRPRKPVSSMQQQGQLPPTHMHSM 729



 Score =  116 bits (290), Expect = 1e-22
 Identities = 78/150 (52%), Positives = 96/150 (64%), Gaps = 4/150 (2%)
 Frame = -2

Query: 2889 QTDYLRKISLKMLTMETKSQTNGVANSLPLNTGGGSQNPQDPASHSMQSQVRNPGQS-QI 2713
            Q+DYLRKISLKML+ME+KSQ N + NSL  N  G S  P DP S  MQ+QV N GQS  I
Sbjct: 90   QSDYLRKISLKMLSMESKSQ-NAMPNSLQSNNPGSSNRPPDPGS--MQNQVHNQGQSLPI 146

Query: 2712 PLE-NQYEARQQLLSQNIQKNIGNSGIHESVEFSSALPSGDSLNQSLMPNAVNQGSNIQ- 2539
            PL  NQ + RQQLLSQNIQ N+ ++G+  S   SSALPS   L+QS +P+ V Q  N+Q 
Sbjct: 147  PLSANQSQVRQQLLSQNIQNNMSSAGVQGSSGLSSALPSVSGLSQSPIPSVVGQTVNMQN 206

Query: 2538 -SGVAXXXXXXXXXXXXVASYMFANSTRQL 2452
             SG++            V S +FANS RQ+
Sbjct: 207  MSGIS-QNSGGNSMGQGVPSNLFANSQRQI 235


>ref|XP_009348724.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            15a-like isoform X1 [Pyrus x bretschneideri]
          Length = 1202

 Score =  221 bits (562), Expect = 4e-54
 Identities = 219/732 (29%), Positives = 306/732 (41%), Gaps = 7/732 (0%)
 Frame = -2

Query: 2256 QQPCMQMSSGLQPSQSTLQQA----QPSVMQSSSGLQQNPQSAVAQSTTNALQQHPQSVL 2089
            QQ  +  S+ LQ SQ ++  A    Q SV  S S L QN QSA+ QS+   LQQH Q VL
Sbjct: 87   QQQNLLQSTPLQSSQQSVMPASSVMQTSVQPSLSSLPQNQQSAMQQSSQPMLQQHSQPVL 146

Query: 2088 RXXXXXXXXXXXXQAXXXXXXXXXXXXXXXXQKINASNLQQHP--QQKINSPNLQQHQLI 1915
            R                                  A + QQ P  QQ I  P  QQ   +
Sbjct: 147  RQQQQPQQA--------------------------AVHQQQTPMAQQPILPPQQQQQPPL 180

Query: 1914 GXXXXXXXXXXXXXXXXXXXXNVTNLPQYLLGNQQQLCQQSNMSGLQKQQQQPIYTMHXX 1735
                                   +NL Q      Q + QQ+N+  +Q+QQQQ +      
Sbjct: 181  ----------------MVQQPTASNLSQ-----NQMIGQQNNVGNMQQQQQQRLLNQQ-- 217

Query: 1734 XXXXXXXXXXQLSTNMLQIQGKHAQSHPAQQQLMSQHPSXXXXXXXXXXXXXQPNSLQRD 1555
                          N+L +Q +  Q    QQQLM+Q  S              P S    
Sbjct: 218  -------------NNLLNLQQQQQQQQQQQQQLMAQQSSLSNIHQQQLG----PQSNVTG 260

Query: 1554 MQQRIQTSGGSMLNHQSLLDQKQVFHSQRPPPEASSKEWQTSVVPAIXXXXXXXXXAVDV 1375
            +QQ+ Q +  +M  HQ  L  +      +      ++   +S+ P            V V
Sbjct: 261  LQQQQQNNXSNM--HQQQLGSQSNVTGLQQQQHLGTQSGNSSMQPNQHSVHLLQQSKVQV 318

Query: 1374 QEEVYQTIKSMREKYLPDLCHMHQKIAQKRQQHDSLPHPPKSEQTERLKIFKNMLDKMIG 1195
            Q++ +Q   +M    LP      Q  A ++Q    +   P   Q   L+   N L + + 
Sbjct: 319  QQQQHQNASNM----LPTQGQQSQPQASQQQMMSQIQPQPAQMQQMGLQQQSNPLQRDMQ 374

Query: 1194 FLNLPKSSMIPGLKDKLASYEKQILNILNSNRSWNPGLLQQQIQPTGGHTLSIXXXXXXX 1015
               L  S  I G          Q  N+++  +      L Q  +P               
Sbjct: 375  -QRLQASGQISGTM-------LQAQNVMDQQKQ-----LYQSQRPL-------------- 407

Query: 1014 XXXXQVPSSTSIDXXXXXXXXXXXNVVDQQKEVYQTIKSMREKYLPELSDMHQRISQKCQ 835
                   SSTS+D              D Q+EVYQ IK M+EKYLPELS+M+ +I+ K Q
Sbjct: 408  ----PETSSTSLDSSAQTGHANGG---DWQEEVYQKIKVMKEKYLPELSEMYHKIATKLQ 460

Query: 834  QHDSLPRPPKCEQHERLRIFKNMLDKMIGFLNLPKSFMIPSLKDKLASYEKQILNILNTN 655
            QHDSLP+ PK EQ E+L++FK ML+++I  L + KS + P LKDKL  YEKQI+N +NTN
Sbjct: 461  QHDSLPQQPKSEQLEKLKMFKTMLERLISILQVSKSNISPGLKDKLGLYEKQIVNFINTN 520

Query: 654  RPRKSDPLQQQIQPTGDHPLSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 475
            RPRK  P  QQ Q    H  S+                                      
Sbjct: 521  RPRKQGPPLQQGQLPPPHLHSMQQPQSQI------------------------------- 549

Query: 474  XXXXXXXXQNPLLKQYENLINSHMQPTDLQNSVLSTQPTAMTSMNHGSLPPNHVGVTTAQ 295
                      P ++ +EN +N  +Q  +LQ SV + Q   MTS+   S+  +  GV+TAQ
Sbjct: 550  ----------PQVQSHENQMNPQLQTMNLQGSVPTMQQNNMTSLQQNSM-SSISGVSTAQ 598

Query: 294  SNLLNSLQPGSIMMLGQGDNSVSLQLVCVGATLQYQSAGNALQQGNLNTM-SQSTVNGLQ 118
             N++NSLQP + +  GQG+   SLQ V VG+    Q+  +A Q  N+N + SQ+ V+ LQ
Sbjct: 599  QNMMNSLQPSTNLDSGQGNALNSLQQVPVGSI--QQTPVSAPQLANMNGLSSQNGVSMLQ 656

Query: 117  SNVNSLQMNPDM 82
             N+NSLQ N  M
Sbjct: 657  PNINSLQSNSGM 668


>ref|XP_006465238.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            15a-like isoform X2 [Citrus sinensis]
          Length = 1364

 Score =  220 bits (561), Expect = 5e-54
 Identities = 173/455 (38%), Positives = 224/455 (49%), Gaps = 50/455 (10%)
 Frame = -2

Query: 2256 QQPCMQMSSGLQPSQSTLQQAQ---PSVMQSSS--GLQQNPQSAVAQSTTNALQQHPQSV 2092
            QQP +   + LQ SQ +  Q     P++MQS+   GLQQN QS+V QST   +QQHPQSV
Sbjct: 276  QQPNLLQPNQLQSSQQSGMQTSSVMPNMMQSAPLPGLQQNQQSSVQQSTQPMMQQHPQSV 335

Query: 2091 LRXXXXXXXXXXXXQAXXXXXXXXXXXXXXXXQKINASNLQQHPQQKINSPNLQQHQLIG 1912
            LR            Q                         QQ   Q+ N+ N+QQ QLIG
Sbjct: 336  LRPQQQQQQTVGIHQQQTPMPQQSVMPP-------QQQQQQQLMGQQPNTVNMQQSQLIG 388

Query: 1911 XXXXXXXXXXXXXXXXXXXXNVTNLP---------------QYLLGNQ-------QQLCQ 1798
                                  +NLP               Q L+  Q       QQL  
Sbjct: 389  QQNNVGDMQQQQRLLGQQ----SNLPNLQQQQQQQQQQQQQQQLMAQQNLSSMHHQQLGP 444

Query: 1797 QSNMSGLQKQQQQPIYT----------------MHXXXXXXXXXXXXQLSTNMLQIQGKH 1666
            QSN+SGLQ+Q QQ +                  M             Q + N+L  QG+ 
Sbjct: 445  QSNVSGLQQQPQQQLLGTQSGNSSMQTNQHPAHMLQQPKVPVQQQMQQSAPNLLPNQGQQ 504

Query: 1665 AQSHPAQQQLMSQHPSXXXXXXXXXXXXXQPNSLQRDMQQRIQTSG---GSMLNHQSLLD 1495
             QS P QQQ+MSQ  S             QPN LQRDMQQR+Q SG    S+L  Q+++D
Sbjct: 505  QQSQPQQQQMMSQIQSQPTQLQQQLGLQQQPNPLQRDMQQRLQASGQASASLLQPQNVMD 564

Query: 1494 Q-KQVFHSQRPPPEASSKEWQTSVVPAIXXXXXXXXXAVDVQEEVYQTIKSMREKYLPDL 1318
            Q KQ++  QR  PE SS    ++               VD QEEVYQ IK+M+E YLP+L
Sbjct: 565  QQKQLYQPQRALPETSSTSLDST-------HQTGQANGVDWQEEVYQKIKTMKEMYLPEL 617

Query: 1317 CHMHQKIAQKRQQHDSLPHPPKSEQTERLKIFKNMLDKMIGFLNLPKSSMIPGLKDKLAS 1138
              M+QKIA K QQHDSLP  PKS+Q E+LKIFK ML+++I FL + KS+++PG K+KL S
Sbjct: 618  NEMYQKIAAKLQQHDSLPQQPKSDQLEKLKIFKTMLERIITFLQVSKSNILPGFKEKLGS 677

Query: 1137 YEKQILNILNSNRSWNP-GLLQQ--QIQPTGGHTL 1042
            YEKQI+N +++NR   P   +QQ  Q+ PT  H++
Sbjct: 678  YEKQIVNFISTNRPRKPVSSMQQQGQLPPTHMHSM 712



 Score =  114 bits (286), Expect = 4e-22
 Identities = 78/150 (52%), Positives = 96/150 (64%), Gaps = 4/150 (2%)
 Frame = -2

Query: 2889 QTDYLRKISLKMLTMETKSQTNGVANSLPLNTGGGSQNPQDPASHSMQSQVRNPGQS-QI 2713
            Q+DYLRKISLKML+ME+KSQ N + NSL  N  G S  P DP S  MQ+QV N GQS  I
Sbjct: 75   QSDYLRKISLKMLSMESKSQ-NAMPNSLQSNNPGSSNRPPDPVS--MQNQVHNQGQSLPI 131

Query: 2712 PLE-NQYEARQQLLSQNIQKNIGNSGIHESVEFSSALPSGDSLNQSLMPNAVNQGSNIQ- 2539
            PL  NQ + RQQLLSQNIQ N+ ++G+  S   SSALPS   L+QS +P+ V Q  N+Q 
Sbjct: 132  PLSANQSQVRQQLLSQNIQNNMLSAGVQGSSGLSSALPSVSGLSQSPIPSVVGQTVNMQN 191

Query: 2538 -SGVAXXXXXXXXXXXXVASYMFANSTRQL 2452
             SG++            V S +FANS RQ+
Sbjct: 192  MSGIS-QNSGGNSMGQGVPSNLFANSQRQI 220


>ref|XP_006465237.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            15a-like isoform X1 [Citrus sinensis]
          Length = 1378

 Score =  220 bits (561), Expect = 5e-54
 Identities = 173/455 (38%), Positives = 224/455 (49%), Gaps = 50/455 (10%)
 Frame = -2

Query: 2256 QQPCMQMSSGLQPSQSTLQQAQ---PSVMQSSS--GLQQNPQSAVAQSTTNALQQHPQSV 2092
            QQP +   + LQ SQ +  Q     P++MQS+   GLQQN QS+V QST   +QQHPQSV
Sbjct: 276  QQPNLLQPNQLQSSQQSGMQTSSVMPNMMQSAPLPGLQQNQQSSVQQSTQPMMQQHPQSV 335

Query: 2091 LRXXXXXXXXXXXXQAXXXXXXXXXXXXXXXXQKINASNLQQHPQQKINSPNLQQHQLIG 1912
            LR            Q                         QQ   Q+ N+ N+QQ QLIG
Sbjct: 336  LRPQQQQQQTVGIHQQQTPMPQQSVMPP-------QQQQQQQLMGQQPNTVNMQQSQLIG 388

Query: 1911 XXXXXXXXXXXXXXXXXXXXNVTNLP---------------QYLLGNQ-------QQLCQ 1798
                                  +NLP               Q L+  Q       QQL  
Sbjct: 389  QQNNVGDMQQQQRLLGQQ----SNLPNLQQQQQQQQQQQQQQQLMAQQNLSSMHHQQLGP 444

Query: 1797 QSNMSGLQKQQQQPIYT----------------MHXXXXXXXXXXXXQLSTNMLQIQGKH 1666
            QSN+SGLQ+Q QQ +                  M             Q + N+L  QG+ 
Sbjct: 445  QSNVSGLQQQPQQQLLGTQSGNSSMQTNQHPAHMLQQPKVPVQQQMQQSAPNLLPNQGQQ 504

Query: 1665 AQSHPAQQQLMSQHPSXXXXXXXXXXXXXQPNSLQRDMQQRIQTSG---GSMLNHQSLLD 1495
             QS P QQQ+MSQ  S             QPN LQRDMQQR+Q SG    S+L  Q+++D
Sbjct: 505  QQSQPQQQQMMSQIQSQPTQLQQQLGLQQQPNPLQRDMQQRLQASGQASASLLQPQNVMD 564

Query: 1494 Q-KQVFHSQRPPPEASSKEWQTSVVPAIXXXXXXXXXAVDVQEEVYQTIKSMREKYLPDL 1318
            Q KQ++  QR  PE SS    ++               VD QEEVYQ IK+M+E YLP+L
Sbjct: 565  QQKQLYQPQRALPETSSTSLDST-------HQTGQANGVDWQEEVYQKIKTMKEMYLPEL 617

Query: 1317 CHMHQKIAQKRQQHDSLPHPPKSEQTERLKIFKNMLDKMIGFLNLPKSSMIPGLKDKLAS 1138
              M+QKIA K QQHDSLP  PKS+Q E+LKIFK ML+++I FL + KS+++PG K+KL S
Sbjct: 618  NEMYQKIAAKLQQHDSLPQQPKSDQLEKLKIFKTMLERIITFLQVSKSNILPGFKEKLGS 677

Query: 1137 YEKQILNILNSNRSWNP-GLLQQ--QIQPTGGHTL 1042
            YEKQI+N +++NR   P   +QQ  Q+ PT  H++
Sbjct: 678  YEKQIVNFISTNRPRKPVSSMQQQGQLPPTHMHSM 712



 Score =  114 bits (286), Expect = 4e-22
 Identities = 78/150 (52%), Positives = 96/150 (64%), Gaps = 4/150 (2%)
 Frame = -2

Query: 2889 QTDYLRKISLKMLTMETKSQTNGVANSLPLNTGGGSQNPQDPASHSMQSQVRNPGQS-QI 2713
            Q+DYLRKISLKML+ME+KSQ N + NSL  N  G S  P DP S  MQ+QV N GQS  I
Sbjct: 75   QSDYLRKISLKMLSMESKSQ-NAMPNSLQSNNPGSSNRPPDPVS--MQNQVHNQGQSLPI 131

Query: 2712 PLE-NQYEARQQLLSQNIQKNIGNSGIHESVEFSSALPSGDSLNQSLMPNAVNQGSNIQ- 2539
            PL  NQ + RQQLLSQNIQ N+ ++G+  S   SSALPS   L+QS +P+ V Q  N+Q 
Sbjct: 132  PLSANQSQVRQQLLSQNIQNNMLSAGVQGSSGLSSALPSVSGLSQSPIPSVVGQTVNMQN 191

Query: 2538 -SGVAXXXXXXXXXXXXVASYMFANSTRQL 2452
             SG++            V S +FANS RQ+
Sbjct: 192  MSGIS-QNSGGNSMGQGVPSNLFANSQRQI 220


>ref|XP_007208137.1| hypothetical protein PRUPE_ppa000277mg [Prunus persica]
            gi|462403779|gb|EMJ09336.1| hypothetical protein
            PRUPE_ppa000277mg [Prunus persica]
          Length = 1360

 Score =  218 bits (555), Expect = 3e-53
 Identities = 169/453 (37%), Positives = 219/453 (48%), Gaps = 48/453 (10%)
 Frame = -2

Query: 2256 QQPCM----QMSSGLQPSQSTLQQAQPSVMQSS-SGLQQNPQSAVAQSTTNALQQHPQSV 2092
            QQP +    Q+ S  QP   T    QPSV+QSS S LQQN QSA+ QST + LQQHPQSV
Sbjct: 268  QQPNLLQPTQLQSSQQPVMQTSSVIQPSVVQSSLSSLQQNQQSAIQQSTPSMLQQHPQSV 327

Query: 2091 LRXXXXXXXXXXXXQAXXXXXXXXXXXXXXXXQKINASNLQQHPQQKINSPNLQQHQLIG 1912
            LR            Q                         QQ   Q+ N+ +L Q+QLIG
Sbjct: 328  LRQPQQQQASVVHQQQTSMPQQPILPP--------QQQQQQQLMVQQSNATSLSQNQLIG 379

Query: 1911 XXXXXXXXXXXXXXXXXXXXN--VTNLPQYLLGNQQQLCQQ------------------- 1795
                                   + NL Q     QQQ  QQ                   
Sbjct: 380  QQNNVGDMQQQQQQQRLLSQQNNILNLQQQQQQQQQQQQQQQQLMAQQSNLSNMHQPQLG 439

Query: 1794 --SNMSGLQKQQ--------------QQPIYTMHXXXXXXXXXXXXQLSTNMLQIQGKHA 1663
              SN++GLQ+QQ              Q  ++ +             Q S+N+L  QG+ +
Sbjct: 440  PQSNVTGLQQQQHLGTQSGNSSMQTNQHSVHLLQQSKVQGQQQQQHQSSSNLLPPQGQQS 499

Query: 1662 QSHPAQQQLMSQHPSXXXXXXXXXXXXXQPNSLQRDMQQRIQTSG---GSMLNHQSLLDQ 1492
            Q   +QQQL+SQ  S               N LQRDMQQR+Q SG   G+ML  Q+++DQ
Sbjct: 500  QPQASQQQLLSQIQSQPPQMQQLGLQQQS-NPLQRDMQQRLQASGQVPGTMLQPQNVMDQ 558

Query: 1491 -KQVFHSQRPPPEASSKEWQTSVVPAIXXXXXXXXXAVDVQEEVYQTIKSMREKYLPDLC 1315
             KQ++ SQRP PE SS    ++                D QEEV+Q IK M+E YLP+L 
Sbjct: 559  QKQLYQSQRPLPETSSTSLDSTAQTGHATGG-------DWQEEVFQKIKVMKEMYLPELS 611

Query: 1314 HMHQKIAQKRQQHDSLPHPPKSEQTERLKIFKNMLDKMIGFLNLPKSSMIPGLKDKLASY 1135
             M+QKIA K QQHDSLP  PKSEQ ++LK+F+ ML+++I  L + KSS+ PGLKDKL  Y
Sbjct: 612  EMYQKIATKLQQHDSLPQQPKSEQLDKLKMFRTMLERLISVLQISKSSISPGLKDKLLLY 671

Query: 1134 EKQILNILNSNRSWNP--GLLQQQIQPTGGHTL 1042
            EKQI+N +N+NR   P   L Q Q+ P   H++
Sbjct: 672  EKQIVNFINTNRPRKPVSSLQQGQLPPPHMHSM 704



 Score =  186 bits (471), Expect = 1e-43
 Identities = 197/728 (27%), Positives = 300/728 (41%), Gaps = 4/728 (0%)
 Frame = -2

Query: 2253 QPCMQMSSGLQPSQSTLQQAQPSVMQSSSGLQQNPQSAVAQSTTNALQQHPQSVLRXXXX 2074
            Q   Q  + LQP+Q  LQ +Q  VMQ+SS +Q +    V QS+ ++LQQ+ QS ++    
Sbjct: 264  QQQQQQPNLLQPTQ--LQSSQQPVMQTSSVIQPS----VVQSSLSSLQQNQQSAIQ---- 313

Query: 2073 XXXXXXXXQAXXXXXXXXXXXXXXXXQKINASNLQQHPQQKINSPNLQQHQLIGXXXXXX 1894
                                       +   S LQQHPQ  +  P  QQ  ++       
Sbjct: 314  ---------------------------QSTPSMLQQHPQSVLRQPQQQQASVVHQ----- 341

Query: 1893 XXXXXXXXXXXXXXNVTNLPQYLLGNQQQLCQQSNMSGLQKQQQQPIYTMHXXXXXXXXX 1714
                                      Q  + QQ  +   Q+QQQQ               
Sbjct: 342  -------------------------QQTSMPQQPILPPQQQQQQQ--------------- 361

Query: 1713 XXXQLSTNMLQIQGKHAQSHPAQQQLMSQHPSXXXXXXXXXXXXXQPNSLQRDMQQRIQT 1534
                     L +Q  +A S  +Q QL+ Q  +               +  Q+  QQR+ +
Sbjct: 362  ---------LMVQQSNATSL-SQNQLIGQQNNVG-------------DMQQQQQQQRLLS 398

Query: 1533 SGGSMLNHQSLLDQKQVFHSQRPPPEASSKEWQTSVVPAIXXXXXXXXXAVDVQEEVYQT 1354
               ++LN Q    Q+Q    Q+    A          P +                    
Sbjct: 399  QQNNILNLQQQQQQQQQQQQQQQQLMAQQSNLSNMHQPQLGPQSNVTGLQQQQHLGTQSG 458

Query: 1353 IKSMR-EKYLPDLCHMHQKIAQKRQQHDSLPH--PPKSEQTERLKIFKNMLDKMIGFLNL 1183
              SM+  ++   L    +   Q++QQH S  +  PP+ +Q++     + +L ++    + 
Sbjct: 459  NSSMQTNQHSVHLLQQSKVQGQQQQQHQSSSNLLPPQGQQSQPQASQQQLLSQI---QSQ 515

Query: 1182 PKSSMIPGLKDKLASYEKQILNILNSNRSWNPGLLQQQIQPTGGHTLSIXXXXXXXXXXX 1003
            P      GL+ +    ++ +   L ++      +LQ Q      + +             
Sbjct: 516  PPQMQQLGLQQQSNPLQRDMQQRLQASGQVPGTMLQPQ------NVMDQQKQLYQSQRPL 569

Query: 1002 QVPSSTSIDXXXXXXXXXXXNVVDQQKEVYQTIKSMREKYLPELSDMHQRISQKCQQHDS 823
               SSTS+D              D Q+EV+Q IK M+E YLPELS+M+Q+I+ K QQHDS
Sbjct: 570  PETSSTSLDSTAQTGHATGG---DWQEEVFQKIKVMKEMYLPELSEMYQKIATKLQQHDS 626

Query: 822  LPRPPKCEQHERLRIFKNMLDKMIGFLNLPKSFMIPSLKDKLASYEKQILNILNTNRPRK 643
            LP+ PK EQ ++L++F+ ML+++I  L + KS + P LKDKL  YEKQI+N +NTNRPRK
Sbjct: 627  LPQQPKSEQLDKLKMFRTMLERLISVLQISKSSISPGLKDKLLLYEKQIVNFINTNRPRK 686

Query: 642  SDPLQQQIQPTGDHPLSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 463
                 QQ Q    H  S+                                          
Sbjct: 687  PVSSLQQGQLPPPHMHSMQQSQSQMTQ--------------------------------- 713

Query: 462  XXXXQNPLLKQYENLINSHMQPTDLQNSVLSTQPTAMTSMNHGSLPPNHVGVTTAQSNLL 283
                    ++ +EN +N  +Q  +LQ S +    + MTS+   S+     GV+TAQ N++
Sbjct: 714  --------VQSHENQMNPQLQSMNLQGSAM--PQSNMTSLQQSSMSALS-GVSTAQQNMM 762

Query: 282  NSLQPGSIMMLGQGDNSVSLQLVCVGATLQYQSAGNALQQGNLNTM-SQSTVNGLQSNVN 106
            NSL P S M  GQG+   SLQ V VG+    Q+  +A QQ N+N + SQS VN LQ+N+N
Sbjct: 763  NSLPPSSSMDSGQGNALNSLQQVPVGS--NQQTPVSAPQQANMNALSSQSGVNMLQANMN 820

Query: 105  SLQMNPDM 82
            S+Q    M
Sbjct: 821  SIQSTSGM 828



 Score =  118 bits (296), Expect = 3e-23
 Identities = 79/149 (53%), Positives = 91/149 (61%), Gaps = 3/149 (2%)
 Frame = -2

Query: 2889 QTDYLRKISLKMLTMETKSQTNGVANSLPLNTGGGSQNPQDPA-SHSMQSQVRNPGQS-Q 2716
            Q+DYLRKISLKMLTMETKSQ N +ANSL  N+ G S  P DP  S  MQ QV N GQS  
Sbjct: 74   QSDYLRKISLKMLTMETKSQ-NTMANSLQSNSAGNSNRPPDPVGSFGMQPQVPNQGQSLS 132

Query: 2715 IPLE-NQYEARQQLLSQNIQKNIGNSGIHESVEFSSALPSGDSLNQSLMPNAVNQGSNIQ 2539
            +PL  NQ +ARQQLLSQNIQ NI  +G+  S   SSALP    L Q+ +P+ V Q  N+Q
Sbjct: 133  MPLPANQSQARQQLLSQNIQNNIPAAGVQSSAGLSSALPPSSGLTQTPIPSIVGQNQNMQ 192

Query: 2538 SGVAXXXXXXXXXXXXVASYMFANSTRQL 2452
            +               V S MFA S RQL
Sbjct: 193  N-----------MGQGVPSNMFATSQRQL 210


>ref|XP_012444230.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            15a-like isoform X1 [Gossypium raimondii]
            gi|763789583|gb|KJB56579.1| hypothetical protein
            B456_009G126200 [Gossypium raimondii]
          Length = 1333

 Score =  217 bits (553), Expect = 4e-53
 Identities = 158/433 (36%), Positives = 211/433 (48%), Gaps = 30/433 (6%)
 Frame = -2

Query: 2250 PCMQMSSGLQPSQSTLQQAQPSVMQSS-SGLQQNPQSAVAQSTTNALQQHPQSVLRXXXX 2074
            P  Q+ S  Q    T    QPS +QS+  GLQQN QS++ QST + LQQH QSVLR    
Sbjct: 265  PPTQLQSSQQSGMQTSSIMQPSALQSTLPGLQQNQQSSLQQSTQSMLQQHQQSVLRQQQQ 324

Query: 2073 XXXXXXXXQAXXXXXXXXXXXXXXXXQKINASNLQQHPQ-QKINSPNLQQHQLIGXXXXX 1897
                                        +     QQH   Q+ N+ N+ Q+QLIG     
Sbjct: 325  PQQTTSAGI-------HQQQTPMTQQSMMPQQQQQQHMMGQQANAANIPQNQLIGQQNSI 377

Query: 1896 XXXXXXXXXXXXXXXNVTNLPQYLLG--------NQQQLCQQSNMSGLQKQQQQPIYTMH 1741
                                 Q L+         +QQQL  QSN+SGLQ+QQQQ + T  
Sbjct: 378  ADMQQQRLLGQSSNLQQQQQQQQLMAQQNNLSNMHQQQLGPQSNISGLQQQQQQLVGTQS 437

Query: 1740 XXXXXXXXXXXXQL--------------STNMLQIQGKHAQSHPAQQQLMSQHPSXXXXX 1603
                         +              + N+L  QG+ +Q    QQQLMSQ  S     
Sbjct: 438  GNSSMQTNQQSLHMLSQPKVALQQTQQTAPNLLPTQGQTSQQPQQQQQLMSQMQSQPTQL 497

Query: 1602 XXXXXXXXQPNSLQRDMQQRIQTSG---GSMLNHQSLLDQ-KQVFHSQRPPPEASSKEWQ 1435
                    QPN +Q++MQQR+Q SG    S+L  Q+L+DQ KQ++ SQR  PE SS    
Sbjct: 498  QQQLGLQQQPNQVQQNMQQRLQASGQTSSSLLQSQNLIDQQKQLYQSQRAVPETSSTSLD 557

Query: 1434 TSVVPAIXXXXXXXXXAVDVQEEVYQTIKSMREKYLPDLCHMHQKIAQKRQQHDSLPHPP 1255
            ++                D QE+VYQ IK+M+E Y  +L  MHQKI+ K  QHDS P  P
Sbjct: 558  STAQTGHSNGG-------DWQEDVYQKIKAMKETYFSELNEMHQKISAKLLQHDSFPQQP 610

Query: 1254 KSEQTERLKIFKNMLDKMIGFLNLPKSSMIPGLKDKLASYEKQILNILNSNRSWNP--GL 1081
            KSEQ E+LKIFK ML++++ FL + K++++P  KDKL+SYEKQILN +N+NR   P   L
Sbjct: 611  KSEQLEKLKIFKTMLERILHFLTVSKANIVPAFKDKLSSYEKQILNFINTNRPRKPVSAL 670

Query: 1080 LQQQIQPTGGHTL 1042
             Q Q+ P   H++
Sbjct: 671  QQGQLPPPHMHSM 683



 Score =  103 bits (257), Expect = 9e-19
 Identities = 69/150 (46%), Positives = 91/150 (60%), Gaps = 4/150 (2%)
 Frame = -2

Query: 2889 QTDYLRKISLKMLTMETKSQTNGVANSLPLNTGGGSQNPQDPASHSMQSQVRNPGQS-QI 2713
            QTDYLR+ISLKMLTMETKSQ     N++P NTG  S+ P DP S  MQ+QV + GQS  I
Sbjct: 75   QTDYLRRISLKMLTMETKSQ-----NTMP-NTGNNSK-PPDPGSQGMQNQVHSQGQSVPI 127

Query: 2712 PLE-NQYEARQQLLSQNIQKNIGNSGIHESVEFSSALPSGDSLNQSLMPNAVNQGSNIQ- 2539
            PL+ NQ +A QQLL Q++  N+ ++G+  S    S +P    L+Q+ + N V Q SNIQ 
Sbjct: 128  PLQCNQSQAHQQLLPQSVPNNMASAGVQSSAGLQSGMPPVSGLSQNPISNVVGQNSNIQN 187

Query: 2538 -SGVAXXXXXXXXXXXXVASYMFANSTRQL 2452
             SG+             + S +FAN  RQ+
Sbjct: 188  MSGI-----LQNSMGQGMPSNIFANQQRQM 212


>gb|KJB56578.1| hypothetical protein B456_009G126200 [Gossypium raimondii]
          Length = 1183

 Score =  217 bits (553), Expect = 4e-53
 Identities = 158/433 (36%), Positives = 211/433 (48%), Gaps = 30/433 (6%)
 Frame = -2

Query: 2250 PCMQMSSGLQPSQSTLQQAQPSVMQSS-SGLQQNPQSAVAQSTTNALQQHPQSVLRXXXX 2074
            P  Q+ S  Q    T    QPS +QS+  GLQQN QS++ QST + LQQH QSVLR    
Sbjct: 265  PPTQLQSSQQSGMQTSSIMQPSALQSTLPGLQQNQQSSLQQSTQSMLQQHQQSVLRQQQQ 324

Query: 2073 XXXXXXXXQAXXXXXXXXXXXXXXXXQKINASNLQQHPQ-QKINSPNLQQHQLIGXXXXX 1897
                                        +     QQH   Q+ N+ N+ Q+QLIG     
Sbjct: 325  PQQTTSAGI-------HQQQTPMTQQSMMPQQQQQQHMMGQQANAANIPQNQLIGQQNSI 377

Query: 1896 XXXXXXXXXXXXXXXNVTNLPQYLLG--------NQQQLCQQSNMSGLQKQQQQPIYTMH 1741
                                 Q L+         +QQQL  QSN+SGLQ+QQQQ + T  
Sbjct: 378  ADMQQQRLLGQSSNLQQQQQQQQLMAQQNNLSNMHQQQLGPQSNISGLQQQQQQLVGTQS 437

Query: 1740 XXXXXXXXXXXXQL--------------STNMLQIQGKHAQSHPAQQQLMSQHPSXXXXX 1603
                         +              + N+L  QG+ +Q    QQQLMSQ  S     
Sbjct: 438  GNSSMQTNQQSLHMLSQPKVALQQTQQTAPNLLPTQGQTSQQPQQQQQLMSQMQSQPTQL 497

Query: 1602 XXXXXXXXQPNSLQRDMQQRIQTSG---GSMLNHQSLLDQ-KQVFHSQRPPPEASSKEWQ 1435
                    QPN +Q++MQQR+Q SG    S+L  Q+L+DQ KQ++ SQR  PE SS    
Sbjct: 498  QQQLGLQQQPNQVQQNMQQRLQASGQTSSSLLQSQNLIDQQKQLYQSQRAVPETSSTSLD 557

Query: 1434 TSVVPAIXXXXXXXXXAVDVQEEVYQTIKSMREKYLPDLCHMHQKIAQKRQQHDSLPHPP 1255
            ++                D QE+VYQ IK+M+E Y  +L  MHQKI+ K  QHDS P  P
Sbjct: 558  STAQTGHSNGG-------DWQEDVYQKIKAMKETYFSELNEMHQKISAKLLQHDSFPQQP 610

Query: 1254 KSEQTERLKIFKNMLDKMIGFLNLPKSSMIPGLKDKLASYEKQILNILNSNRSWNP--GL 1081
            KSEQ E+LKIFK ML++++ FL + K++++P  KDKL+SYEKQILN +N+NR   P   L
Sbjct: 611  KSEQLEKLKIFKTMLERILHFLTVSKANIVPAFKDKLSSYEKQILNFINTNRPRKPVSAL 670

Query: 1080 LQQQIQPTGGHTL 1042
             Q Q+ P   H++
Sbjct: 671  QQGQLPPPHMHSM 683



 Score =  103 bits (257), Expect = 9e-19
 Identities = 69/150 (46%), Positives = 91/150 (60%), Gaps = 4/150 (2%)
 Frame = -2

Query: 2889 QTDYLRKISLKMLTMETKSQTNGVANSLPLNTGGGSQNPQDPASHSMQSQVRNPGQS-QI 2713
            QTDYLR+ISLKMLTMETKSQ     N++P NTG  S+ P DP S  MQ+QV + GQS  I
Sbjct: 75   QTDYLRRISLKMLTMETKSQ-----NTMP-NTGNNSK-PPDPGSQGMQNQVHSQGQSVPI 127

Query: 2712 PLE-NQYEARQQLLSQNIQKNIGNSGIHESVEFSSALPSGDSLNQSLMPNAVNQGSNIQ- 2539
            PL+ NQ +A QQLL Q++  N+ ++G+  S    S +P    L+Q+ + N V Q SNIQ 
Sbjct: 128  PLQCNQSQAHQQLLPQSVPNNMASAGVQSSAGLQSGMPPVSGLSQNPISNVVGQNSNIQN 187

Query: 2538 -SGVAXXXXXXXXXXXXVASYMFANSTRQL 2452
             SG+             + S +FAN  RQ+
Sbjct: 188  MSGI-----LQNSMGQGMPSNIFANQQRQM 212


>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
            gi|223530005|gb|EEF31930.1| transcription cofactor,
            putative [Ricinus communis]
          Length = 1382

 Score =  216 bits (549), Expect = 1e-52
 Identities = 160/423 (37%), Positives = 209/423 (49%), Gaps = 42/423 (9%)
 Frame = -2

Query: 2241 QMSSGLQPSQSTLQQAQPSVMQSS--SGLQQNPQSAVAQSTTNALQQHPQSVLRXXXXXX 2068
            Q+ S  Q S  T    QPS+MQS+  SGLQQN  S V QS  + LQQHPQSVLR      
Sbjct: 290  QLQSSQQSSMQTSSVMQPSLMQSAPLSGLQQNQPSTVQQSAQSMLQQHPQSVLRQQQQPQ 349

Query: 2067 XXXXXXQAXXXXXXXXXXXXXXXXQKINASNLQQHPQQKINSPNLQQHQLIGXXXXXXXX 1888
                  Q                         QQ   Q+ N+ N+QQ+QLIG        
Sbjct: 350  QASSIHQQQASMMQQSLLPHHH-----QQQQQQQLMGQQQNATNMQQNQLIGQQNNVGDM 404

Query: 1887 XXXXXXXXXXXXNVTNLPQY-----------LLG--------NQQQLCQQSNMSGLQKQQ 1765
                        N+ NL Q            L+         +QQQL  QSN+SGLQ+QQ
Sbjct: 405  QQQQQRLLGQQNNIQNLQQQHQQHQQQQQQQLMAQQNNLSSMHQQQLGSQSNVSGLQQQQ 464

Query: 1764 QQPIYTMHXXXXXXXXXXXXQL---------------STNMLQIQGKHAQSHPA--QQQL 1636
            Q  + T               +               ++N+L  QG+  Q  P   QQQL
Sbjct: 465  QHLLGTQPGNSGMQTNQQSMHMLQRPKVPLQQQTHQSASNLLPTQGQQPQPQPQLPQQQL 524

Query: 1635 MSQHPSXXXXXXXXXXXXXQPNSLQRDMQQRIQTSG---GSMLNHQSLLDQ-KQVFHSQR 1468
             SQ  S             Q N+LQRDMQ  +Q S     S+   Q+++DQ KQ++ SQR
Sbjct: 525  PSQIQSQPTQLQQQLALQQQSNTLQRDMQAGLQASSQAPSSLTQQQNVIDQQKQLYQSQR 584

Query: 1467 PPPEASSKEWQTSVVPAIXXXXXXXXXAVDVQEEVYQTIKSMREKYLPDLCHMHQKIAQK 1288
            P PE SS    ++              AVDVQEEVYQ IK+M+E Y P+L  M+ KIA K
Sbjct: 585  PLPETSSTSLDSTAQTG-------HANAVDVQEEVYQKIKAMKEMYFPELNEMYHKIATK 637

Query: 1287 RQQHDSLPHPPKSEQTERLKIFKNMLDKMIGFLNLPKSSMIPGLKDKLASYEKQILNILN 1108
             QQHDSLP PPK+EQ E+L++FK+ML+++I FL +PKSS++P  ++KL SYEKQI+N +N
Sbjct: 638  LQQHDSLPQPPKTEQLEKLRLFKSMLERIITFLQVPKSSVMPSFREKLGSYEKQIINFIN 697

Query: 1107 SNR 1099
            +NR
Sbjct: 698  TNR 700



 Score =  123 bits (309), Expect = 8e-25
 Identities = 82/151 (54%), Positives = 96/151 (63%), Gaps = 5/151 (3%)
 Frame = -2

Query: 2889 QTDYLRKISLKMLTMETKSQTNGVANSLPLNTGGGSQNPQDP-ASHSMQSQVRNPGQS-Q 2716
            Q+DYLRKISLKMLTME+KSQ N V NS+P N  G +  P DP AS SMQ QV N GQS  
Sbjct: 75   QSDYLRKISLKMLTMESKSQ-NNVPNSVPPNPFGNNNRPPDPGASQSMQPQVHNQGQSLP 133

Query: 2715 IPLE-NQYEARQQLLSQNIQKNIGNSGIHESVEFSSALPSGDSLNQSLMPNAVNQGSNIQ 2539
            +PL  NQ + RQQLLSQNIQ N+ ++GI  S   +SALP    L Q+ +PN V Q SN+Q
Sbjct: 134  VPLSANQTQTRQQLLSQNIQNNMASTGIQSSAGLTSALPPVSGLAQTSIPNVVGQNSNMQ 193

Query: 2538 --SGVAXXXXXXXXXXXXVASYMFANSTRQL 2452
              SGV             V S MFANS RQ+
Sbjct: 194  NISGV-PQNSAGNSLGQGVPSNMFANSQRQM 223


>ref|XP_008366117.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
            transcription subunit 15a-like, partial [Malus domestica]
          Length = 1269

 Score =  214 bits (544), Expect = 5e-52
 Identities = 219/738 (29%), Positives = 306/738 (41%), Gaps = 13/738 (1%)
 Frame = -2

Query: 2256 QQPCMQMSSGLQPSQSTLQQAQPSVMQSSSGLQ--------QNPQSAVAQSTTNALQQHP 2101
            QQ   Q  + LQP+Q  LQ +Q SVM +SS +Q        QN QSA+ QS+   L QH 
Sbjct: 550  QQQQQQQQNLLQPTQ--LQSSQQSVMPTSSVMQPSVQSSXQQNQQSAMQQSSQPMLPQHS 607

Query: 2100 QSVLRXXXXXXXXXXXXQAXXXXXXXXXXXXXXXXQKINASNLQQHPQQKINSP---NLQ 1930
            Q VLR            Q                         QQ PQ  +  P   NL 
Sbjct: 608  QPVLRQQQQPQQVAVHQQQTPMAQQPILTPQ------------QQQPQLMVQQPTASNLS 655

Query: 1929 QHQLIGXXXXXXXXXXXXXXXXXXXXNVTNLPQYLLGNQQQLC-QQSNMSGLQKQQQQPI 1753
            Q+Q+IG                      TN+       QQ+L  QQ+N   LQ+QQQQ  
Sbjct: 656  QNQMIGQQ--------------------TNVGDMQQQQQQRLLNQQNNXLNLQQQQQQX- 694

Query: 1752 YTMHXXXXXXXXXXXXQLSTNMLQIQGKHAQSHPAQQQLMSQHPSXXXXXXXXXXXXXQP 1573
                                   Q Q +  Q    QQQLM+Q  +               
Sbjct: 695  ----------------------QQQQQQQQQQQQQQQQLMAQQSNLSNIHQQQLGPQSNV 732

Query: 1572 NSLQRDMQQRIQTSGGSMLNHQSLLDQKQVFHSQRPPPEASSKEWQTSVVPAIXXXXXXX 1393
              LQ+  Q  +     S ++ Q L  Q  V   Q+      ++   +S+ P         
Sbjct: 733  TGLQQQQQSNL-----SNMHQQQLGSQSNVTGLQQQQ-HLGTQSGNSSMQPNQHSVHLLQ 786

Query: 1392 XXAVDVQEEVYQTIKSMREKYLPDLCHMHQKIAQKRQQHDSLPHPPKSEQTERLKIFKNM 1213
               V VQ++ +    +M    LP      Q  A ++Q    +   P   Q   L+   N 
Sbjct: 787  QSKVQVQQQQHPNASNM----LPTQGQQSQPQASQQQMMSQIQSQPAQMQQMGLQQQSNP 842

Query: 1212 LDKMIGFLNLPKSSMIPGLKDKLASYEKQILNILNSNRSWNPGLLQQQIQPTGGHTLSIX 1033
            L + +    L  S  I G          Q  N+++  +      L Q  +P         
Sbjct: 843  LQRDMQ-QRLQASGQISGTM-------LQAQNVMDQQKQ-----LYQSQRPLAE------ 883

Query: 1032 XXXXXXXXXXQVPSSTSIDXXXXXXXXXXXNVVDQQKEVYQTIKSMREKYLPELSDMHQR 853
                         SSTS+D              D Q++VYQ IK M+EKYLPELS+M+ +
Sbjct: 884  ------------TSSTSLDSSAQTGHANGG---DWQEDVYQKIKVMKEKYLPELSEMYHK 928

Query: 852  ISQKCQQHDSLPRPPKCEQHERLRIFKNMLDKMIGFLNLPKSFMIPSLKDKLASYEKQIL 673
            I+ K QQHDSLP+ PK EQ E+L++F+ ML+++I  L + KS + P LKDKL  YEKQI+
Sbjct: 929  IATKLQQHDSLPQQPKSEQLEKLKMFRTMLERLISILQVSKSNISPGLKDKLGLYEKQIV 988

Query: 672  NILNTNRPRKSDPLQQQIQPTGDHPLSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 493
            N +NTNRPRK  P  QQ Q    H  S+                                
Sbjct: 989  NFINTNRPRKQGPPLQQGQLPPPHMHSMQQPQSQI------------------------- 1023

Query: 492  XXXXXXXXXXXXXXQNPLLKQYENLINSHMQPTDLQNSVLSTQPTAMTSMNHGSLPPNHV 313
                            P ++ +EN +N  +Q  +LQ SV + Q   MTS+   S+  +  
Sbjct: 1024 ----------------PQVQSHENQMNPQLQTMNLQGSVPTMQQNNMTSLQQNSM-SSIS 1066

Query: 312  GVTTAQSNLLNSLQPGSIMMLGQGDNSVSLQLVCVGATLQYQSAGNALQQGNLNTM-SQS 136
            G++T+Q N++NSLQP + +  GQG+   SLQ V VG+    Q+  +A QQ N+N + SQS
Sbjct: 1067 GLSTSQQNMMNSLQPSTNLDSGQGNALNSLQQVPVGSI--QQTPVSAPQQANMNGLSSQS 1124

Query: 135  TVNGLQSNVNSLQMNPDM 82
             V+ LQ N+NSLQ N  M
Sbjct: 1125 GVSMLQPNINSLQSNSGM 1142



 Score =  194 bits (492), Expect = 5e-46
 Identities = 163/458 (35%), Positives = 208/458 (45%), Gaps = 52/458 (11%)
 Frame = -2

Query: 2259 TQQPCMQMSSGLQPS-QSTLQQAQPSVMQSSSG------------LQQNPQS-AVAQSTT 2122
            +QQ  M  SS +QPS QS+ QQ Q S MQ SS              QQ PQ  AV Q  T
Sbjct: 568  SQQSVMPTSSVMQPSVQSSXQQNQQSAMQQSSQPMLPQHSQPVLRQQQQPQQVAVHQQQT 627

Query: 2121 --------NALQQHPQSVLRXXXXXXXXXXXXQAXXXXXXXXXXXXXXXXQK-----INA 1981
                       QQ PQ +++                                     +N 
Sbjct: 628  PMAQQPILTPQQQQPQLMVQQPTASNLSQNQMIGQQTNVGDMQQQQQQRLLNQQNNXLNL 687

Query: 1980 SNLQQHPQQKINSPNLQQHQLIGXXXXXXXXXXXXXXXXXXXXNVTNLPQYLLGN----- 1816
               QQ  QQ+      QQ Q                       NVT L Q    N     
Sbjct: 688  QQQQQQXQQQQQQQQQQQQQQQQLMAQQSNLSNIHQQQLGPQSNVTGLQQQQQSNLSNMH 747

Query: 1815 QQQLCQQSNMSGLQKQQ--------------QQPIYTMHXXXXXXXXXXXXQLSTNMLQI 1678
            QQQL  QSN++GLQ+QQ              Q  ++ +               S NML  
Sbjct: 748  QQQLGSQSNVTGLQQQQHLGTQSGNSSMQPNQHSVHLLQQSKVQVQQQQHPNAS-NMLPT 806

Query: 1677 QGKHAQSHPAQQQLMSQHPSXXXXXXXXXXXXXQPNSLQRDMQQRIQTSG---GSMLNHQ 1507
            QG+ +Q   +QQQ+MSQ  S               N LQRDMQQR+Q SG   G+ML  Q
Sbjct: 807  QGQQSQPQASQQQMMSQIQSQPAQMQQMGLQQQS-NPLQRDMQQRLQASGQISGTMLQAQ 865

Query: 1506 SLLDQ-KQVFHSQRPPPEASSKEWQTSVVPAIXXXXXXXXXAVDVQEEVYQTIKSMREKY 1330
            +++DQ KQ++ SQRP  E SS    +S                D QE+VYQ IK M+EKY
Sbjct: 866  NVMDQQKQLYQSQRPLAETSSTSLDSSAQTGHANGG-------DWQEDVYQKIKVMKEKY 918

Query: 1329 LPDLCHMHQKIAQKRQQHDSLPHPPKSEQTERLKIFKNMLDKMIGFLNLPKSSMIPGLKD 1150
            LP+L  M+ KIA K QQHDSLP  PKSEQ E+LK+F+ ML+++I  L + KS++ PGLKD
Sbjct: 919  LPELSEMYHKIATKLQQHDSLPQQPKSEQLEKLKMFRTMLERLISILQVSKSNISPGLKD 978

Query: 1149 KLASYEKQILNILNSN--RSWNPGLLQQQIQPTGGHTL 1042
            KL  YEKQI+N +N+N  R   P L Q Q+ P   H++
Sbjct: 979  KLGLYEKQIVNFINTNRPRKQGPPLQQGQLPPPHMHSM 1016



 Score =  111 bits (278), Expect = 3e-21
 Identities = 60/124 (48%), Positives = 79/124 (63%), Gaps = 18/124 (14%)
 Frame = -2

Query: 933 DQQKEVYQTIKSMREKYLPELSDMHQRISQKCQQ------------------HDSLPRPP 808
           D Q+EVYQ IK M+E+Y PELS+M+ +I+ K QQ                  HDSLP+ P
Sbjct: 121 DWQEEVYQKIKVMKERYEPELSEMYXKIATKLQQVCNQFNFFFSHNLLLELLHDSLPQQP 180

Query: 807 KCEQHERLRIFKNMLDKMIGFLNLPKSFMIPSLKDKLASYEKQILNILNTNRPRKSDPLQ 628
           K EQ E+L++F+ ML+++I  L + KS + P LKDKL   EKQI+N +NTNRPRK  P  
Sbjct: 181 KSEQLEKLKMFRTMLERLISILQVSKSNISPGLKDKLGLXEKQIVNFINTNRPRKQGPPL 240

Query: 627 QQIQ 616
           QQ Q
Sbjct: 241 QQGQ 244



 Score =  108 bits (270), Expect = 3e-20
 Identities = 61/127 (48%), Positives = 78/127 (61%), Gaps = 20/127 (15%)
 Frame = -2

Query: 1380 DVQEEVYQTIKSMREKYLPDLCHMHQKIAQKRQQ------------------HDSLPHPP 1255
            D QEEVYQ IK M+E+Y P+L  M+ KIA K QQ                  HDSLP  P
Sbjct: 121  DWQEEVYQKIKVMKERYEPELSEMYXKIATKLQQVCNQFNFFFSHNLLLELLHDSLPQQP 180

Query: 1254 KSEQTERLKIFKNMLDKMIGFLNLPKSSMIPGLKDKLASYEKQILNILNSN--RSWNPGL 1081
            KSEQ E+LK+F+ ML+++I  L + KS++ PGLKDKL   EKQI+N +N+N  R   P L
Sbjct: 181  KSEQLEKLKMFRTMLERLISILQVSKSNISPGLKDKLGLXEKQIVNFINTNRPRKQGPPL 240

Query: 1080 LQQQIQP 1060
             Q Q+ P
Sbjct: 241  QQGQLPP 247



 Score =  107 bits (267), Expect = 6e-20
 Identities = 72/158 (45%), Positives = 88/158 (55%), Gaps = 12/158 (7%)
 Frame = -2

Query: 2889 QTDYLRKISLKMLTMETKSQTNGVANSLPLNTGGGSQNPQDPASHSMQSQVRNPG-QSQI 2713
            Q+DYLRKISLKMLTMETKSQ N +AN L  N+ G S  P DP S  MQ QV N G Q Q+
Sbjct: 344  QSDYLRKISLKMLTMETKSQ-NSMANPLQSNSAGNSNRPPDPGSFGMQPQVPNQGMQXQV 402

Query: 2712 PLE----------NQYEARQQLLSQNIQKNIGNSGIHESVEFSSALPSGDSLNQSLMPNA 2563
            P            NQ + RQ LLSQ+IQ NI  +G+  S   SSALP    L Q+ +P+ 
Sbjct: 403  PNHGQSLSMPLPANQSQGRQPLLSQSIQNNIPPAGVQSSSGLSSALPPSSGLTQTPIPSI 462

Query: 2562 VNQGSNIQS-GVAXXXXXXXXXXXXVASYMFANSTRQL 2452
              Q  N+Q+   +            V S +FANS RQ+
Sbjct: 463  GGQNPNMQNMSGSSQNSLGNSMGQGVPSNVFANSQRQM 500


>ref|XP_010658921.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
            [Vitis vinifera]
          Length = 1333

 Score =  211 bits (536), Expect = 4e-51
 Identities = 168/444 (37%), Positives = 217/444 (48%), Gaps = 37/444 (8%)
 Frame = -2

Query: 2256 QQPCMQMSSGLQPSQSTLQQAQPSVMQSS--SGLQQNPQSAVAQSTTNALQQHPQSVLRX 2083
            QQ  +  S+  Q SQ ++ Q   S MQS+  SGLQQN  S+V QS+ + LQQHP +VLR 
Sbjct: 260  QQQTLLQSNQFQSSQQSVMQTS-SGMQSAPLSGLQQNQPSSVQQSSQSVLQQHPPAVLRQ 318

Query: 2082 XXXXXXXXXXXQAXXXXXXXXXXXXXXXXQKINASNLQQHPQQKINSPNLQQHQLIGXXX 1903
                       Q                   + +   QQ   Q  N+  +Q +QLIG   
Sbjct: 319  QQQPQQTPVMHQQQTSMTQQPI---------LPSQQQQQLIGQPPNATTMQSNQLIGQQN 369

Query: 1902 XXXXXXXXXXXXXXXXXNV-TNLP----------------QYLLGN--QQQLCQQSNMSG 1780
                             +   NLP                Q  L N  QQQL  QSN+S 
Sbjct: 370  SFSDLQQQQQQQQQRLLSQQNNLPNLQQQQQQQQHQLMAQQSNLSNIHQQQLGHQSNVSA 429

Query: 1779 LQKQQQQ---------------PIYTMHXXXXXXXXXXXXQLSTNMLQIQGKHAQSHPAQ 1645
            LQ+QQQ                P++ +              +S N+L  QG+ +Q  P+Q
Sbjct: 430  LQQQQQMLGTQSGNPSMQTNQHPVHILQQSKVPVQQQTQQGVS-NLLATQGQQSQQQPSQ 488

Query: 1644 QQLMSQHPSXXXXXXXXXXXXXQPNSLQRDMQQRIQTSGGSMLNHQSLLDQ-KQVFHSQR 1468
            QQLMSQ  S              PNSLQRDMQQR+QTSG ++L  Q+++DQ KQ+F SQR
Sbjct: 489  QQLMSQFQSQSTQLQPQ------PNSLQRDMQQRLQTSG-ALLQTQNVIDQQKQLFQSQR 541

Query: 1467 PPPEASSKEWQTSVVPAIXXXXXXXXXAVDVQEEVYQTIKSMREKYLPDLCHMHQKIAQK 1288
              PEASS    ++                D QEEVYQ IK M+E YLPDL  MHQKIA K
Sbjct: 542  ALPEASSTSLDSTAQTGTINVG-------DWQEEVYQKIKRMKEMYLPDLNEMHQKIAAK 594

Query: 1287 RQQHDSLPHPPKSEQTERLKIFKNMLDKMIGFLNLPKSSMIPGLKDKLASYEKQILNILN 1108
             QQHDSLP  PK+EQ E+LKIFK ML++MI  L L K+S+ P  K+KL  YEKQI++ +N
Sbjct: 595  LQQHDSLPQQPKTEQLEKLKIFKAMLERMITVLQLSKNSITPNFKEKLIGYEKQIVSFIN 654

Query: 1107 SNRSWNPGLLQQQIQPTGGHTLSI 1036
            ++R   P    Q  Q +  H  S+
Sbjct: 655  THRPRKPVPPLQHGQSSVSHMHSM 678



 Score =  185 bits (469), Expect = 2e-43
 Identities = 197/732 (26%), Positives = 295/732 (40%), Gaps = 8/732 (1%)
 Frame = -2

Query: 2253 QPCMQMSSGLQPSQSTLQQAQPSVMQSSSGLQQNPQSAVAQSTTNALQQHPQSVLRXXXX 2074
            Q   Q  + LQ +Q   Q +Q SVMQ+SSG+Q  P S + Q+  +++QQ  QSV      
Sbjct: 256  QQQQQQQTLLQSNQ--FQSSQQSVMQTSSGMQSAPLSGLQQNQPSSVQQSSQSV------ 307

Query: 2073 XXXXXXXXQAXXXXXXXXXXXXXXXXQKINASNLQQHP-------QQKINSPNLQQHQLI 1915
                                             LQQHP       QQ   +P + Q Q  
Sbjct: 308  ---------------------------------LQQHPPAVLRQQQQPQQTPVMHQQQTS 334

Query: 1914 GXXXXXXXXXXXXXXXXXXXXNVTNLPQYLLGNQQQLCQQSNMSGLQKQQQQPIYTMHXX 1735
                                   T     L+G      QQ++ S LQ+QQQQ        
Sbjct: 335  MTQQPILPSQQQQQLIGQPPNATTMQSNQLIG------QQNSFSDLQQQQQQQ------- 381

Query: 1734 XXXXXXXXXXQLSTNMLQIQGKHAQSHPAQQQLMSQHPSXXXXXXXXXXXXXQPNSLQRD 1555
                      +L +    +     Q    Q QLM+Q                  ++L   
Sbjct: 382  --------QQRLLSQQNNLPNLQQQQQQQQHQLMAQQ-----------------SNLSNI 416

Query: 1554 MQQRIQTSGGSMLNHQSLLDQKQVFHSQRPPPEASSKEWQTSVVPAIXXXXXXXXXAVDV 1375
             QQ++    G   N  +L  Q+Q+  +Q   P   + +    ++             V V
Sbjct: 417  HQQQL----GHQSNVSALQQQQQMLGTQSGNPSMQTNQHPVHILQQ---------SKVPV 463

Query: 1374 QEEVYQTIKSMREKYLPDLCHMHQKIAQKRQQHDSLPHPPKSEQTERLKIFKNMLDKMIG 1195
            Q++  Q + ++              +A + QQ    P      Q + +  F++   ++  
Sbjct: 464  QQQTQQGVSNL--------------LATQGQQSQQQP-----SQQQLMSQFQSQSTQLQP 504

Query: 1194 FLNLPKSSMIPGLKDKLASYEKQILNILNSNRSWNPGLLQQQIQPTGGHTLSIXXXXXXX 1015
              N  +  M   L+   A  + Q  N+++  +     L Q Q                  
Sbjct: 505  QPNSLQRDMQQRLQTSGALLQTQ--NVIDQQKQ----LFQSQ------------------ 540

Query: 1014 XXXXQVPSSTSIDXXXXXXXXXXXNVVDQQKEVYQTIKSMREKYLPELSDMHQRISQKCQ 835
                   SSTS+D            V D Q+EVYQ IK M+E YLP+L++MHQ+I+ K Q
Sbjct: 541  -RALPEASSTSLDSTAQTGTIN---VGDWQEEVYQKIKRMKEMYLPDLNEMHQKIAAKLQ 596

Query: 834  QHDSLPRPPKCEQHERLRIFKNMLDKMIGFLNLPKSFMIPSLKDKLASYEKQILNILNTN 655
            QHDSLP+ PK EQ E+L+IFK ML++MI  L L K+ + P+ K+KL  YEKQI++ +NT+
Sbjct: 597  QHDSLPQQPKTEQLEKLKIFKAMLERMITVLQLSKNSITPNFKEKLIGYEKQIVSFINTH 656

Query: 654  RPRKSDPLQQQIQPTGDHPLSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 475
            RPRK  P  Q  Q +  H  S+                                      
Sbjct: 657  RPRKPVPPLQHGQSSVSHMHSMQQPQQSQSQLSQG------------------------- 691

Query: 474  XXXXXXXXQNPLLKQYENLINSHMQPTDLQNSVLSTQPTAMTSMNHGSLPPNHVGVTTAQ 295
                         + +EN +N  +QP +LQ SV + Q   + S+   S+ P+  G+  AQ
Sbjct: 692  -------------QPHENQMNPQLQPMNLQGSVATMQQNNVPSLQPSSM-PSLSGLPNAQ 737

Query: 294  SNLLNSLQPGSIMMLGQGDNSVSLQLVCVGATLQYQSAGNALQQGNLNTM-SQSTVNGLQ 118
             N++NSLQ  + +  GQG+   SLQ   VGA    Q+  +A QQ N+N + SQ+ VN LQ
Sbjct: 738  QNIMNSLQSSANLDSGQGNALTSLQQAAVGAL--QQNPVSAPQQANINNLSSQNGVNVLQ 795

Query: 117  SNVNSLQMNPDM 82
             N+N LQ N +M
Sbjct: 796  QNINQLQPNSNM 807



 Score =  124 bits (311), Expect = 5e-25
 Identities = 82/150 (54%), Positives = 96/150 (64%), Gaps = 5/150 (3%)
 Frame = -2

Query: 2889 QTDYLRKISLKMLTMETKSQTNGVANSLPLNTGGGSQNPQDPASHSMQSQVRNPGQSQIP 2710
            Q+DYLRKISLKMLTMETKSQT  + ++LP N+ G S+NP DPASHSMQ QV N GQ Q+P
Sbjct: 73   QSDYLRKISLKMLTMETKSQT-AMPSNLPSNSAGNSKNPPDPASHSMQPQVHNQGQ-QLP 130

Query: 2709 L---ENQYEARQQLLSQNIQKNIGNSGIHESVEFSSALPSGDSLNQSLMPNAVNQGSNIQ 2539
            +    NQ + RQQLL+QNIQ NI  SG+  S    S L S  SLNQ+ M N V Q S +Q
Sbjct: 131  VPLAPNQSQTRQQLLAQNIQTNIA-SGVPSSASLPSTLSSVTSLNQTPMQNVVGQNSGMQ 189

Query: 2538 --SGVAXXXXXXXXXXXXVASYMFANSTRQ 2455
              SG+             V S MFANS RQ
Sbjct: 190  NISGI-PQNSVGNSMGQGVPSNMFANSQRQ 218


>ref|XP_007023336.1| Uncharacterized protein TCM_027316 [Theobroma cacao]
            gi|508778702|gb|EOY25958.1| Uncharacterized protein
            TCM_027316 [Theobroma cacao]
          Length = 1032

 Score =  207 bits (528), Expect = 3e-50
 Identities = 161/427 (37%), Positives = 212/427 (49%), Gaps = 24/427 (5%)
 Frame = -2

Query: 2250 PCMQMSSGLQPSQSTLQQAQPSVMQSSS--GLQQNPQSAVAQSTTNALQQHPQSVLRXXX 2077
            P  Q+ SG+Q S +     QPS MQS+   GLQQN QS++ QST + LQQH QSVLR   
Sbjct: 265  PPTQLQSGMQTSSTM----QPSAMQSTPLPGLQQNQQSSLQQSTQSMLQQHQQSVLRQQQ 320

Query: 2076 XXXXXXXXXQAXXXXXXXXXXXXXXXXQKINASNLQQHPQ-----QKINSPNLQQHQLIG 1912
                                       Q+      QQH Q     Q+ N  N+QQ QLIG
Sbjct: 321  QPQQAASAGIHQQQTPMTQQSMMPQQHQQPPQPQPQQHQQPHVMGQQTNDANIQQTQLIG 380

Query: 1911 XXXXXXXXXXXXXXXXXXXXNVTNLPQYLLGNQQQLCQQSNMSGLQKQQ----------- 1765
                                 ++NL Q     QQ + QQ+N+S + +QQ           
Sbjct: 381  QQNSIGDMQQQRLLGHPNN--LSNLQQQQQ-QQQLMAQQNNLSNIHQQQLIGTKSGNSSM 437

Query: 1764 QQPIYTMHXXXXXXXXXXXXQLST-NMLQIQGKHAQSHPAQQ--QLMSQHPSXXXXXXXX 1594
            Q    ++H            Q S  ++L  QG+ +Q  P QQ  QLM Q  S        
Sbjct: 438  QTNQQSLHMLSQAKVPLQQTQQSAPSLLPTQGQTSQQPPLQQHRQLMLQMQSQSTQLQQQ 497

Query: 1593 XXXXXQPNSLQRDMQQRIQTSGGSMLNHQSLLDQ-KQVFHSQRPPPEASSKEWQTSVVPA 1417
                 QPN  QRDMQQR+Q S   +L  Q+L+DQ KQ++  QR  PE SS     +    
Sbjct: 498  LGLQQQPNQFQRDMQQRLQASS-PLLQSQNLIDQLKQLYQLQRAVPETSSTSLDFTAQTG 556

Query: 1416 IXXXXXXXXXAVDVQEEVYQTIKSMREKYLPDLCHMHQKIAQKRQQHDSLPHPPKSEQTE 1237
                        D QEEVYQ IK+M+E YLP+L  M+QKIA K QQHDSLP  PKS+Q E
Sbjct: 557  HANGG-------DWQEEVYQKIKTMKETYLPELNEMYQKIAAKLQQHDSLPQQPKSDQLE 609

Query: 1236 RLKIFKNMLDKMIGFLNLPKSSMIPGLKDKLASYEKQILNILNSNRSWNPG--LLQQQIQ 1063
            +LK+FK ML+++I FL + K++++P  KDKL SYEKQI+N +N+NR   P   L Q Q+ 
Sbjct: 610  QLKLFKTMLERIITFLTVSKANILPTFKDKLTSYEKQIINFINTNRPRKPASTLQQGQLP 669

Query: 1062 PTGGHTL 1042
            P   H++
Sbjct: 670  PPHMHSM 676



 Score =  174 bits (442), Expect = 3e-40
 Identities = 111/288 (38%), Positives = 160/288 (55%), Gaps = 4/288 (1%)
 Frame = -2

Query: 933  DQQKEVYQTIKSMREKYLPELSDMHQRISQKCQQHDSLPRPPKCEQHERLRIFKNMLDKM 754
            D Q+EVYQ IK+M+E YLPEL++M+Q+I+ K QQHDSLP+ PK +Q E+L++FK ML+++
Sbjct: 562  DWQEEVYQKIKTMKETYLPELNEMYQKIAAKLQQHDSLPQQPKSDQLEQLKLFKTMLERI 621

Query: 753  IGFLNLPKSFMIPSLKDKLASYEKQILNILNTNRPRKSDPLQQQIQPTGDHPLSIXXXXX 574
            I FL + K+ ++P+ KDKL SYEKQI+N +NTNRPRK     QQ Q    H  S+     
Sbjct: 622  ITFLTVSKANILPTFKDKLTSYEKQIINFINTNRPRKPASTLQQGQLPPPHMHSM----- 676

Query: 573  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNPLLKQ---YENLINSHM 403
                                                       P + Q   ++N +N  +
Sbjct: 677  ---------------------------------------QQPQPQINQTQSHDNQMNPQL 697

Query: 402  QPTDLQNSVLSTQPTAMTSMNHGSLPPNHVGVTTAQSNLLNSLQPGSIMMLGQGDNSVSL 223
            +  ++Q SV + Q    TS+ H SL  +  GV+TAQ  +LNSLQPGS +  GQG+   S+
Sbjct: 698  ESINIQGSVPTMQTNNTTSLQHNSL-SSLPGVSTAQQTMLNSLQPGSNLDSGQGNALGSM 756

Query: 222  QLVCVGATLQYQSAGNALQQGNLNTM-SQSTVNGLQSNVNSLQMNPDM 82
            Q V  G     Q+  +  QQ N++++ SQS ++ LQ N+N LQ N  M
Sbjct: 757  QQVAPGPL--QQNPVSTYQQANISSLSSQSGISVLQQNMNPLQSNSSM 802



 Score =  100 bits (248), Expect = 1e-17
 Identities = 65/148 (43%), Positives = 88/148 (59%), Gaps = 2/148 (1%)
 Frame = -2

Query: 2889 QTDYLRKISLKMLTMETKSQTNGVANSLPLNTGGGSQNPQDPASHSMQSQVRNPGQS-QI 2713
            Q+DYLR+ISLKMLTMETK Q     N++P NTG  S+ P DP S +MQ+QV + GQS  I
Sbjct: 75   QSDYLRRISLKMLTMETKCQ-----NTIP-NTGTNSK-PPDPGSQAMQNQVHSQGQSIPI 127

Query: 2712 PLE-NQYEARQQLLSQNIQKNIGNSGIHESVEFSSALPSGDSLNQSLMPNAVNQGSNIQS 2536
            PL+ NQ + RQQLL QN+  N+ ++G+  S      +P    L Q+ +PN V Q SN+Q+
Sbjct: 128  PLQSNQSQTRQQLLPQNVPNNMTSAGVQSSAGLQYGMPPVSGLTQNPIPNVVGQNSNMQN 187

Query: 2535 GVAXXXXXXXXXXXXVASYMFANSTRQL 2452
                           + S +FAN  RQ+
Sbjct: 188  ---MSGTMQNSLGQGMPSNIFANQQRQM 212


>ref|XP_004486632.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
            [Cicer arietinum]
          Length = 1313

 Score =  205 bits (522), Expect = 2e-49
 Identities = 161/435 (37%), Positives = 217/435 (49%), Gaps = 29/435 (6%)
 Frame = -2

Query: 2256 QQPCMQMSSGLQPSQSTLQQAQPSVMQSSS--GLQQNPQSAVAQ-STTNALQQHPQSVLR 2086
            QQ  +  S+ LQ SQ ++ Q QPS+MQ+SS   +Q N QS   Q S  + LQQHPQ + +
Sbjct: 259  QQQNLLQSNQLQSSQQSVMQ-QPSMMQTSSLSSIQHNQQSNNGQQSAQSMLQQHPQVIRQ 317

Query: 2085 XXXXXXXXXXXXQAXXXXXXXXXXXXXXXXQKINASNLQQHPQQKI-----NSPNLQQHQ 1921
                        Q                         QQ PQQ++     N+ N+Q  Q
Sbjct: 318  QQQQQTSIIHQQQTPMAQQSILPP--------------QQQPQQQLMGQQANATNMQHTQ 363

Query: 1920 LIGXXXXXXXXXXXXXXXXXXXXNVTNLPQYLLGNQQQ----LCQQ--SNMSGLQKQQ-- 1765
            ++G                     ++NL Q  L NQQ     + QQ  +N+ GLQ QQ  
Sbjct: 364  MLGSQNNVGDLQQSQRLLAQQNN-LSNLQQQQLINQQNNLSNIHQQLGNNVPGLQPQQVL 422

Query: 1764 ---------QQPIYTMHXXXXXXXXXXXXQL--STNMLQIQGKHAQSHPAQQQLMSQHPS 1618
                     Q   ++ H                ++N+L  Q + +Q    QQQLM Q  S
Sbjct: 423  GSQSGNSGMQTSQHSAHVLQQSKVPIQQQSQQGASNLLPSQAQQSQPQAPQQQLMPQIQS 482

Query: 1617 XXXXXXXXXXXXXQPNSLQRDMQQRIQTSGGSMLNHQSLLDQ-KQVFHSQRPPPEASSKE 1441
                         QPN LQRDMQQR+Q SG S+L H  +L+Q KQ++ SQRP PE SS  
Sbjct: 483  QPAQLQQQLGLQQQPNPLQRDMQQRLQASG-SLLQHSGVLEQQKQLYQSQRPLPETSSNS 541

Query: 1440 WQTSVVPAIXXXXXXXXXAVDVQEEVYQTIKSMREKYLPDLCHMHQKIAQKRQQHDSLPH 1261
              ++                D QEEVYQ IK+M+E YLP+L  M+QKIA K QQHDSLPH
Sbjct: 542  MDSTAQTGQPSGG-------DWQEEVYQKIKAMKESYLPELSEMYQKIAAKLQQHDSLPH 594

Query: 1260 PPKSEQTERLKIFKNMLDKMIGFLNLPKSSMIPGLKDKLASYEKQILNILNSNRSWNPGL 1081
             PKS+Q E+LK+FK ML+++I FL + KS++ P LK+KL SYEKQI+N +N+NR      
Sbjct: 595  QPKSDQLEKLKVFKLMLERLITFLQVSKSNISPSLKEKLGSYEKQIINFINTNRPRKMSS 654

Query: 1080 LQQ-QIQPTGGHTLS 1039
            LQ  Q+ P   H++S
Sbjct: 655  LQPGQLPPPHMHSMS 669



 Score =  164 bits (415), Expect = 4e-37
 Identities = 109/277 (39%), Positives = 156/277 (56%), Gaps = 2/277 (0%)
 Frame = -2

Query: 933  DQQKEVYQTIKSMREKYLPELSDMHQRISQKCQQHDSLPRPPKCEQHERLRIFKNMLDKM 754
            D Q+EVYQ IK+M+E YLPELS+M+Q+I+ K QQHDSLP  PK +Q E+L++FK ML+++
Sbjct: 555  DWQEEVYQKIKAMKESYLPELSEMYQKIAAKLQQHDSLPHQPKSDQLEKLKVFKLMLERL 614

Query: 753  IGFLNLPKSFMIPSLKDKLASYEKQILNILNTNRPRKSDPLQQ-QIQPTGDHPLSIXXXX 577
            I FL + KS + PSLK+KL SYEKQI+N +NTNRPRK   LQ  Q+ P   H +S     
Sbjct: 615  ITFLQVSKSNISPSLKEKLGSYEKQIINFINTNRPRKMSSLQPGQLPPPHMHSMSQTQSQ 674

Query: 576  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNPLLKQYENLINSHMQP 397
                                                          ++ +EN +N+ +Q 
Sbjct: 675  VTQ-------------------------------------------VQSHENQMNTQLQT 691

Query: 396  TDLQNSVLSTQPTAMTSMNHGSLPPNHVGVTTAQSNLLNSLQPGSIMMLGQGDNSVSLQL 217
            T++Q  V + Q   MTSM H SL     G++T Q N++N++Q  + +   QG N  SLQ 
Sbjct: 692  TNMQGPVATMQQNNMTSMQHNSLS----GLSTTQQNMMNTMQSSANLDSAQG-NMNSLQQ 746

Query: 216  VCVGATLQYQSAGNALQQGNLNTM-SQSTVNGLQSNV 109
            V V ++LQ Q+   A QQ N +++ SQ+ VN +Q N+
Sbjct: 747  VPV-SSLQ-QNPVTAPQQTNASSLSSQAGVNVIQPNL 781



 Score =  101 bits (251), Expect = 4e-18
 Identities = 66/119 (55%), Positives = 76/119 (63%), Gaps = 1/119 (0%)
 Frame = -2

Query: 2889 QTDYLRKISLKMLTMETKSQTNGVANSLPLNTGGGSQNPQDPASHSMQSQVRNPGQSQ-I 2713
            Q DYLRKISLKMLTMETKSQ   +AN++P N GG S  P DP    MQSQV N GQ   I
Sbjct: 74   QPDYLRKISLKMLTMETKSQGT-MANNIPSNQGGPSNKPPDPGL-VMQSQVHNQGQQHPI 131

Query: 2712 PLENQYEARQQLLSQNIQKNIGNSGIHESVEFSSALPSGDSLNQSLMPNAVNQGSNIQS 2536
            PL NQ ++RQQLLSQNIQ N+ +            LPS   L Q+ +PN V Q SNIQ+
Sbjct: 132  PLSNQPQSRQQLLSQNIQSNMAS---------QPNLPSVSGLAQTPIPN-VGQNSNIQN 180


>ref|XP_009367255.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            15a-like [Pyrus x bretschneideri]
          Length = 1361

 Score =  202 bits (514), Expect = 1e-48
 Identities = 205/723 (28%), Positives = 291/723 (40%), Gaps = 3/723 (0%)
 Frame = -2

Query: 2241 QMSSGLQPSQSTLQQAQPSVMQSSSGLQQNPQSAVAQSTTNALQQHPQSVLRXXXXXXXX 2062
            Q+ S  Q    T    QPSV  S S LQ N QSA+ QS+   LQQH Q VLR        
Sbjct: 290  QLQSSQQSVMPTSSVMQPSVQSSLSSLQHNQQSAMQQSSQPMLQQHSQPVLRQQQ----- 344

Query: 2061 XXXXQAXXXXXXXXXXXXXXXXQKINASNLQQHPQQKINSPNLQQHQLIGXXXXXXXXXX 1882
                                      A      PQQ I     QQ  L+           
Sbjct: 345  -------------------------QAQQQTPMPQQPILPQQQQQQPLM----------- 368

Query: 1881 XXXXXXXXXXNVTNLPQYLLGNQQQLCQQSNMSGLQKQQQQPIYTMHXXXXXXXXXXXXQ 1702
                       V       L   Q + QQ+N+  +Q+QQQQ                   
Sbjct: 369  -----------VQQATASNLSQNQMIGQQNNVGDMQQQQQQQRLLSQQNNLL-------- 409

Query: 1701 LSTNMLQIQGKHAQSHPAQQQLMSQHPSXXXXXXXXXXXXXQPNSLQRDMQQRIQTSGGS 1522
               N+ Q Q +H Q     QQLM+Q  +              P S    +QQ+ Q++  +
Sbjct: 410  ---NLQQQQQQHQQQKQQHQQLMAQQSNLSNMHQQQLG----PQSNVTGLQQQQQSNLSN 462

Query: 1521 MLNHQSLLDQKQVFHSQRPPPEASSKEWQTSVVPAIXXXXXXXXXAVDVQEEVYQTIKSM 1342
            M  HQ  L  +      +      ++   +S+ P              +Q++ +Q   +M
Sbjct: 463  M--HQQQLGSQSNATGLQQQQHLGTQSGNSSMQPNQHSVHL-------LQQQQHQNASNM 513

Query: 1341 REKYLPDLCHMHQKIAQKRQQHD--SLPHPPKSEQTERLKIFKNMLDKMIGFLNLPKSSM 1168
                LP      Q  A + QQ       +P + +  +RL+    +   M+          
Sbjct: 514  ----LPSQGQQSQPQASQMQQMSLQQQSNPLQRDMQQRLQASGQISGTML---------- 559

Query: 1167 IPGLKDKLASYEKQILNILNSNRSWNPGLLQQQIQPTGGHTLSIXXXXXXXXXXXQVPSS 988
                         Q  N+++  +        Q  Q    H  +               SS
Sbjct: 560  -------------QSQNVMDQQK--------QLYQTQRAHPET---------------SS 583

Query: 987  TSIDXXXXXXXXXXXNVVDQQKEVYQTIKSMREKYLPELSDMHQRISQKCQQHDSLPRPP 808
            TS+D              D Q+EVYQ IKSM+E Y PELS+M+Q+I+ K QQHDSLP+ P
Sbjct: 584  TSLDSTAQTGHATGG---DWQEEVYQKIKSMKELYFPELSEMYQKIATKLQQHDSLPQQP 640

Query: 807  KCEQHERLRIFKNMLDKMIGFLNLPKSFMIPSLKDKLASYEKQILNILNTNRPRKSDPLQ 628
            K EQ E+L++FK ML+++I  L  PKS + P  K+KL +YEKQI+N +NTNRPRK  P  
Sbjct: 641  KSEQLEKLKMFKTMLERLISVLQFPKSNITPGFKEKLGTYEKQIVNFINTNRPRKQVPPL 700

Query: 627  QQIQPTGDHPLSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ 448
            QQ Q    H  S+                                               
Sbjct: 701  QQGQLPPPHMHSMQQPQSQITQ-------------------------------------- 722

Query: 447  NPLLKQYENLINSHMQPTDLQNSVLSTQPTAMTSMNHGSLPPNHVGVTTAQSNLLNSLQP 268
               ++ +E+ +N  +Q  +LQ SV + Q   MTS+   S+  +  GV+TAQ N++NSLQP
Sbjct: 723  ---VQSHEHQMNPQLQTMNLQGSVPTMQQNNMTSLQQNSM-SSISGVSTAQQNMMNSLQP 778

Query: 267  GSIMMLGQGDNSVSLQLVCVGATLQYQSAGNALQQGNLNTM-SQSTVNGLQSNVNSLQMN 91
             + +  GQG+   SLQ V VG+    Q+  +A QQ N+N + SQS V+ LQ N+NSLQ N
Sbjct: 779  STNLDSGQGNALNSLQQVPVGSI--QQTPVSAPQQANMNALSSQSGVSMLQPNINSLQSN 836

Query: 90   PDM 82
              M
Sbjct: 837  SGM 839



 Score =  120 bits (302), Expect = 5e-24
 Identities = 69/120 (57%), Positives = 83/120 (69%), Gaps = 2/120 (1%)
 Frame = -2

Query: 2889 QTDYLRKISLKMLTMETKSQTNGVANSLPLNTGGGSQNPQDPASHSMQSQVRNPGQS-QI 2713
            Q+DYLRKISLKMLTMETKSQ N +ANSL  N+ G S  P DPAS +MQ QV N GQS  +
Sbjct: 73   QSDYLRKISLKMLTMETKSQ-NSMANSLQSNSAGNSNRPPDPASFAMQPQVPNQGQSLSM 131

Query: 2712 PLE-NQYEARQQLLSQNIQKNIGNSGIHESVEFSSALPSGDSLNQSLMPNAVNQGSNIQS 2536
            PL  NQ + RQQLLSQNIQ N+  +G+  S   SSALP    L Q+ +P+ V Q  N+Q+
Sbjct: 132  PLPANQSQGRQQLLSQNIQNNVPPAGVQSSSGLSSALPPSSGLTQTSIPSIVGQNPNMQN 191


>ref|XP_009770214.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
            isoform X4 [Nicotiana sylvestris]
          Length = 1197

 Score =  201 bits (510), Expect = 4e-48
 Identities = 156/423 (36%), Positives = 200/423 (47%), Gaps = 33/423 (7%)
 Frame = -2

Query: 2256 QQPCMQMSSGLQPSQSTLQQA---QPSVMQSSS--GLQQNPQSAVAQSTTNALQQHPQSV 2092
            QQ   Q  + LQP+Q    Q    QPS MQS+S   LQQN QS V QST + L Q  QSV
Sbjct: 309  QQQQQQQQNLLQPTQIQSSQQTMMQPSSMQSTSLSNLQQNQQSTVQQSTQSVLHQRSQSV 368

Query: 2091 LRXXXXXXXXXXXXQAXXXXXXXXXXXXXXXXQKINASNLQQHPQQKI-----NSPNLQQ 1927
            +R                                      QQH QQ++     N+ NLQQ
Sbjct: 369  MRQQQAPMLHQQQSAMLQQPILPA----------------QQHQQQQLIAQQANATNLQQ 412

Query: 1926 HQLIGXXXXXXXXXXXXXXXXXXXXNVTNLPQYLLG--------NQQQLCQQSNMSGLQK 1771
            +QLIG                    ++    Q LL         +QQQL  QSN++G+Q+
Sbjct: 413  NQLIGQQNTMPDVQQRIVGQQNNYSSLQQ--QQLLNQQNNLQNMHQQQLGSQSNIAGVQQ 470

Query: 1770 QQ---------------QQPIYTMHXXXXXXXXXXXXQLSTNMLQIQGKHAQSHPAQQQL 1636
            QQ               Q PI+ +                T +L  QG+ +QS PAQQQ+
Sbjct: 471  QQLTGSQQPGNSGVPSNQHPIHMLQQSKVPLQQQMLQG-GTTLLPSQGQQSQSQPAQQQM 529

Query: 1635 MSQHPSXXXXXXXXXXXXXQPNSLQRDMQQRIQTSGGSMLNHQSLLDQKQVFHSQRPPPE 1456
            MSQ  S             Q N LQR+MQQR+QTSG  +     +  QKQ++  QR  PE
Sbjct: 530  MSQSQSQPGQLQPPLGLQQQTNQLQREMQQRLQTSGPLLQQQNVMEQQKQLYQPQRAAPE 589

Query: 1455 ASSKEWQTSVVPAIXXXXXXXXXAVDVQEEVYQTIKSMREKYLPDLCHMHQKIAQKRQQH 1276
            ASS    ++              A D+QEEVYQ IKSMRE YLP+L  ++QKIA K QQH
Sbjct: 590  ASSTSLDSTA-------QTGNANAADLQEEVYQKIKSMREMYLPELNDLYQKIAAKVQQH 642

Query: 1275 DSLPHPPKSEQTERLKIFKNMLDKMIGFLNLPKSSMIPGLKDKLASYEKQILNILNSNRS 1096
            DSLP  P++EQ E+LK+FK  L++++ FL L K  + P  K+KL   EK I   LNSNR 
Sbjct: 643  DSLPQRPQTEQIEKLKVFKMTLERVVVFLRLNKHDIQPSHKEKLLQVEKHISFFLNSNRP 702

Query: 1095 WNP 1087
              P
Sbjct: 703  RKP 705



 Score =  139 bits (350), Expect = 1e-29
 Identities = 168/640 (26%), Positives = 267/640 (41%), Gaps = 10/640 (1%)
 Frame = -2

Query: 1971 QQHPQQKINSPNLQQHQLIGXXXXXXXXXXXXXXXXXXXXNVTNLPQYLLGNQQQLCQQS 1792
            QQ  QQ+      QQ  L+                     +++NL Q    NQQ   QQS
Sbjct: 301  QQQQQQQQQQQQQQQQNLLQPTQIQSSQQTMMQPSSMQSTSLSNLQQ----NQQSTVQQS 356

Query: 1791 NMSGLQKQQQQPIYTMHXXXXXXXXXXXXQLSTNMLQIQGKHAQSHPAQQQLMSQHPSXX 1612
              S L ++ Q  +                   + MLQ     AQ H  QQQL++Q  +  
Sbjct: 357  TQSVLHQRSQSVMRQQQAPMLHQQ-------QSAMLQQPILPAQQHQ-QQQLIAQQANAT 408

Query: 1611 XXXXXXXXXXXQPNSLQRDMQQRI--QTSGGSMLNHQSLLDQKQVFHSQRPPPEASSKEW 1438
                          +   D+QQRI  Q +  S L  Q LL+Q+    +       S    
Sbjct: 409  NLQQNQLIGQ---QNTMPDVQQRIVGQQNNYSSLQQQQLLNQQNNLQNMHQQQLGSQSNI 465

Query: 1437 QTSVVPAIXXXXXXXXXAVDVQEEVYQTIKSMREKYLPDLCHMHQKIAQKRQQHDSLPHP 1258
                   +          V   +     I  +++  +P        + Q+  Q  +   P
Sbjct: 466  AGVQQQQLTGSQQPGNSGVPSNQH---PIHMLQQSKVP--------LQQQMLQGGTTLLP 514

Query: 1257 PKSEQTERLKIFKNMLDKMIGFLNLPKSSMIP-GLKDKLASYEKQILNILNSNRSWNPGL 1081
             + +Q++     + M+ +     + P     P GL+ +    ++++   L ++      L
Sbjct: 515  SQGQQSQSQPAQQQMMSQS---QSQPGQLQPPLGLQQQTNQLQREMQQRLQTSGP----L 567

Query: 1080 LQQQIQPTGGHTLSIXXXXXXXXXXXQVPSSTSIDXXXXXXXXXXXNVVDQQKEVYQTIK 901
            LQQQ      + +                SSTS+D              D Q+EVYQ IK
Sbjct: 568  LQQQ------NVMEQQKQLYQPQRAAPEASSTSLDSTAQTGNAN---AADLQEEVYQKIK 618

Query: 900  SMREKYLPELSDMHQRISQKCQQHDSLPRPPKCEQHERLRIFKNMLDKMIGFLNLPKSFM 721
            SMRE YLPEL+D++Q+I+ K QQHDSLP+ P+ EQ E+L++FK  L++++ FL L K  +
Sbjct: 619  SMREMYLPELNDLYQKIAAKVQQHDSLPQRPQTEQIEKLKVFKMTLERVVVFLRLNKHDI 678

Query: 720  IPSLKDKLASYEKQILNILNTNRPRK-SDPLQQQI-QPTG--DHPLSIXXXXXXXXXXXX 553
             PS K+KL   EK I   LN+NRPRK + PLQ Q+ QP+     P S+            
Sbjct: 679  QPSHKEKLLQVEKHISFFLNSNRPRKPTPPLQGQLPQPSMQLQQPQSL------------ 726

Query: 552  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNPLLKQYENLINSHMQP--TDLQNS 379
                                               NP ++  +  + +  Q   T+LQ++
Sbjct: 727  -------------------------------DGQGNPPMQPVQGSMAAMQQNNITNLQHN 755

Query: 378  VLSTQPTAMTSMNHGSLPPNHVGVTTAQSNLLNSLQPGSIMMLGQGDNSVSLQLVCVGAT 199
             LS  PT                ++ +Q +++N++Q GS + LGQG++  SLQ V  G+ 
Sbjct: 756  SLSGVPT----------------ISNSQQHMVNTVQSGSTVDLGQGNSLNSLQQVATGSL 799

Query: 198  LQYQSAGNALQQGNLNTM-SQSTVNGLQSNVNSLQMNPDM 82
               Q+  N+ QQ N++++ SQS  N +Q+N+ SLQ N ++
Sbjct: 800  --QQNPVNSPQQVNISSLNSQSGTNPVQANLGSLQPNSNV 837



 Score =  109 bits (273), Expect = 1e-20
 Identities = 61/121 (50%), Positives = 78/121 (64%), Gaps = 3/121 (2%)
 Frame = -2

Query: 2889 QTDYLRKISLKMLTMETKSQTNGVANSLPLNTGGGSQNPQDPASHSMQSQVRNPGQSQIP 2710
            Q DYLRKISLKMLTMETKSQ N + NS+  N     QN   P SHSMQSQV +  Q Q+P
Sbjct: 90   QQDYLRKISLKMLTMETKSQ-NPINNSMQPNAASSGQNALGPGSHSMQSQVNSQAQ-QLP 147

Query: 2709 LE---NQYEARQQLLSQNIQKNIGNSGIHESVEFSSALPSGDSLNQSLMPNAVNQGSNIQ 2539
            +    NQ + RQ LL QNIQ N+ ++G+  S   + ALP   +L Q+ MPN + Q +N+Q
Sbjct: 148  VPMVANQTQTRQPLLQQNIQNNMASTGLQNSASLTPALPPVSNLTQATMPNVMGQNANLQ 207

Query: 2538 S 2536
            +
Sbjct: 208  T 208


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