BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00010717
         (1304 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010275247.1| PREDICTED: DNA-directed RNA polymerases IV a...   545   0.0  
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ...   539   0.0  
ref|XP_011036682.1| PREDICTED: DNA-directed RNA polymerases IV a...   531   0.0  
ref|XP_010667540.1| PREDICTED: DNA-directed RNA polymerases IV a...   541   0.0  
ref|XP_008452849.1| PREDICTED: DNA-directed RNA polymerases IV a...   541   0.0  
gb|KNA21785.1| hypothetical protein SOVF_039620 [Spinacia oleracea]   543   0.0  
ref|XP_010046894.1| PREDICTED: DNA-directed RNA polymerases IV a...   539   0.0  
ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theob...   528   0.0  
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerases IV a...   527   0.0  
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerases IV a...   541   0.0  
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode...   532   0.0  
ref|XP_010937061.1| PREDICTED: DNA-directed RNA polymerases IV a...   526   0.0  
ref|XP_008784482.1| PREDICTED: DNA-directed RNA polymerases IV a...   528   0.0  
ref|XP_007011718.1| DNA-directed RNA polymerase isoform 2 [Theob...   523   0.0  
ref|XP_012452401.1| PREDICTED: DNA-directed RNA polymerase D sub...   520   0.0  
gb|KHG03399.1| DNA-directed RNA polymerase D subunit 2a -like pr...   518   0.0  
ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerases IV a...   523   0.0  
ref|XP_002324332.2| DNA-directed RNA polymerase family protein [...   531   0.0  
ref|XP_012076429.1| PREDICTED: DNA-directed RNA polymerases IV a...   518   0.0  
ref|XP_009605686.1| PREDICTED: DNA-directed RNA polymerases IV a...   520   0.0  

>ref|XP_010275247.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Nelumbo nucifera]
          Length = 1201

 Score =  545 bits (1404), Expect(2) = 0.0
 Identities = 262/304 (86%), Positives = 286/304 (94%)
 Frame = -3

Query: 912  YIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSP 733
            +IGANLQ GDIVIGR AESG DHSIKLKHTE+GKVQKVVL+AND+G+NFAVVSLRQ+RSP
Sbjct: 889  FIGANLQAGDIVIGRSAESGADHSIKLKHTERGKVQKVVLSANDDGKNFAVVSLRQVRSP 948

Query: 732  ILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKG 553
             LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFPTRQTPGQLLEAALGKG
Sbjct: 949  SLGDKFSSMHGQKGVLGFLESQENFPFTLQGIVPDIVINPHAFPTRQTPGQLLEAALGKG 1008

Query: 552  IACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQR 373
            IACGGS+RYATP+T  SID IT+QLHRAG+SRWGSER+YNG++GEMMRSLIFMGPTFYQR
Sbjct: 1009 IACGGSMRYATPYTAASIDVITDQLHRAGYSRWGSERIYNGRTGEMMRSLIFMGPTFYQR 1068

Query: 372  LNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTL 193
            L HMAEDKVK+RNTGPVHPLTRQPV+DRKRFGGVKFGEMERDCLLAHGA+ANLHERLF L
Sbjct: 1069 LIHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGVKFGEMERDCLLAHGAAANLHERLFML 1128

Query: 192  SDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQEL 13
            SDFSQMH+C KC N+ANVIQR V GG  K+RG YCRFC+SAENIV+V++PYGAKLLCQEL
Sbjct: 1129 SDFSQMHICRKCTNLANVIQRPVPGG-KKIRGPYCRFCESAENIVRVNVPYGAKLLCQEL 1187

Query: 12   FSMG 1
            FSMG
Sbjct: 1188 FSMG 1191



 Score =  221 bits (564), Expect(2) = 0.0
 Identities = 107/127 (84%), Positives = 116/127 (91%), Gaps = 1/127 (0%)
 Frame = -1

Query: 1304 KHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYF 1125
            KHSQQA+G+STTNPNIRVDTLS QLYYPQRPLFRTM+SDCLG P +PQG NGVL +PEYF
Sbjct: 745  KHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMVSDCLGRPEYPQGHNGVLPRPEYF 804

Query: 1124 NGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFE-AKRLKVK 948
            NGQNAIVAVNVH GYNQEDSLVMNRASLERGMFRTEH+RSYKA+VDN ELF+  KR + K
Sbjct: 805  NGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRTEHIRSYKADVDNSELFDNNKRQRPK 864

Query: 947  DRVDFGK 927
            DRVDFGK
Sbjct: 865  DRVDFGK 871


>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
            gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
            subunit, putative [Ricinus communis]
          Length = 1203

 Score =  539 bits (1389), Expect(2) = 0.0
 Identities = 256/304 (84%), Positives = 286/304 (94%)
 Frame = -3

Query: 912  YIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSP 733
            +IGANLQ+GDIVIGRCAESG DHSIKLKHTE+G VQKVVL++NDEG+NFAVVSLRQ+RSP
Sbjct: 891  FIGANLQSGDIVIGRCAESGPDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSP 950

Query: 732  ILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKG 553
             LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPH+FP+RQTPGQLLEAALGKG
Sbjct: 951  CLGDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHSFPSRQTPGQLLEAALGKG 1010

Query: 552  IACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQR 373
            IACGGS++YATPF+T S++ ITNQLHRAGFSRWG+ERVYNG++GEM+RSLIFMGPTFYQR
Sbjct: 1011 IACGGSMKYATPFSTLSVEAITNQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQR 1070

Query: 372  LNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTL 193
            L HMAEDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFTL
Sbjct: 1071 LIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTL 1130

Query: 192  SDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQEL 13
            SD SQMH+C KC N+ANVIQR+V GG  K+RG YCR C+S + IVKV++PYGAKLLCQEL
Sbjct: 1131 SDSSQMHICQKCKNVANVIQRAVPGGR-KIRGPYCRVCESVDEIVKVNVPYGAKLLCQEL 1189

Query: 12   FSMG 1
            FSMG
Sbjct: 1190 FSMG 1193



 Score =  197 bits (502), Expect(2) = 0.0
 Identities = 96/126 (76%), Positives = 108/126 (85%)
 Frame = -1

Query: 1304 KHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYF 1125
            KHSQQA+G+ TTNPNIRVDTLS QLYYPQRPLFRT+ SDCLG P   +G NG++ KPE +
Sbjct: 749  KHSQQAIGFPTTNPNIRVDTLSHQLYYPQRPLFRTVTSDCLGKPGDTRGHNGIVPKPELY 808

Query: 1124 NGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKD 945
            NGQNAIVAVNVH GYNQEDSLVMNRASLERGMFR+EH+RSYKA+VDN EL + KR K  D
Sbjct: 809  NGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKADVDNKELLD-KRRKYDD 867

Query: 944  RVDFGK 927
             V+FGK
Sbjct: 868  NVNFGK 873


>ref|XP_011036682.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Populus euphratica]
          Length = 1190

 Score =  531 bits (1369), Expect(2) = 0.0
 Identities = 250/304 (82%), Positives = 285/304 (93%)
 Frame = -3

Query: 912  YIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSP 733
            +IGAN+Q+GDIVIG+CAESG DHS+KLKHTE+G VQKVVL++NDEG+NFAVVSLRQ+RSP
Sbjct: 878  FIGANMQSGDIVIGKCAESGADHSVKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSP 937

Query: 732  ILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKG 553
             LGDKFSSMHGQKGV+G LESQENFPFT QG+VPDIVINPHAFP+RQTPGQLLEAALGKG
Sbjct: 938  CLGDKFSSMHGQKGVLGFLESQENFPFTIQGVVPDIVINPHAFPSRQTPGQLLEAALGKG 997

Query: 552  IACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQR 373
            IACGGS RYATPF+T S+D+I +QLHRA FSRWG+ERVYNG++GEM+RSLIFMGPTFYQR
Sbjct: 998  IACGGSKRYATPFSTLSVDDIIDQLHRAKFSRWGNERVYNGRTGEMVRSLIFMGPTFYQR 1057

Query: 372  LNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTL 193
            L HMAEDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFTL
Sbjct: 1058 LVHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTL 1117

Query: 192  SDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQEL 13
            SD S+MH+C KC N+ANVIQR+V GG  K+RG YCR C+S ++++KVS+PYGAKLLCQEL
Sbjct: 1118 SDSSEMHICQKCKNVANVIQRAVPGGR-KIRGPYCRVCESVDDLIKVSVPYGAKLLCQEL 1176

Query: 12   FSMG 1
            FSMG
Sbjct: 1177 FSMG 1180



 Score =  205 bits (521), Expect(2) = 0.0
 Identities = 101/126 (80%), Positives = 110/126 (87%)
 Frame = -1

Query: 1304 KHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYF 1125
            KHSQQA+G+STTNPNIRVDTLS QL+YPQRPLFRTMISDCLG P +P G N VL KPE F
Sbjct: 736  KHSQQAIGFSTTNPNIRVDTLSHQLHYPQRPLFRTMISDCLGKPGYPLGHNAVLPKPELF 795

Query: 1124 NGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKD 945
            NGQNAIVAVNVH GYNQEDSLVMNRASLERGMFR+EH+RSYKAEVDN EL + KR K +D
Sbjct: 796  NGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKELTD-KRRKSED 854

Query: 944  RVDFGK 927
             + FGK
Sbjct: 855  SITFGK 860


>ref|XP_010667540.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Beta
            vulgaris subsp. vulgaris]
            gi|731317050|ref|XP_010667543.1| PREDICTED: DNA-directed
            RNA polymerases IV and V subunit 2-like [Beta vulgaris
            subsp. vulgaris] gi|870867229|gb|KMT18122.1| hypothetical
            protein BVRB_2g031510 [Beta vulgaris subsp. vulgaris]
          Length = 1209

 Score =  541 bits (1393), Expect(2) = 0.0
 Identities = 256/304 (84%), Positives = 286/304 (94%)
 Frame = -3

Query: 912  YIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSP 733
            YIGANLQ+GDI+IGRCAESG DHS+KLKHTE+G VQKVVL+AND+G+NFAVVSLRQ+RSP
Sbjct: 897  YIGANLQSGDIIIGRCAESGADHSVKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSP 956

Query: 732  ILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKG 553
             LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP+RQTPGQLLEAALGKG
Sbjct: 957  CLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKG 1016

Query: 552  IACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQR 373
            IACGGS+RYATPF+T S++ IT QLHRAGFSRWG+ERVYNG++GEM+R+LIFMGPTFYQR
Sbjct: 1017 IACGGSLRYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQR 1076

Query: 372  LNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTL 193
            L HM+EDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFTL
Sbjct: 1077 LIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTL 1136

Query: 192  SDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQEL 13
            SD SQMHVC KC NIANVIQR++ GG  K+RG YCRFC+S + IVKV++PYGAKLLCQEL
Sbjct: 1137 SDSSQMHVCRKCKNIANVIQRAIPGG-KKIRGPYCRFCESVDEIVKVNVPYGAKLLCQEL 1195

Query: 12   FSMG 1
            FSMG
Sbjct: 1196 FSMG 1199



 Score =  194 bits (493), Expect(2) = 0.0
 Identities = 96/126 (76%), Positives = 106/126 (84%)
 Frame = -1

Query: 1304 KHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYF 1125
            KHS QA+GYS+TNPNIRVDTLS Q+YYPQRPLFR++ISDCLG P +P G++ +L K E+F
Sbjct: 755  KHSGQAIGYSSTNPNIRVDTLSHQMYYPQRPLFRSVISDCLGKPGYPLGRSQILPKAEFF 814

Query: 1124 NGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKD 945
            NGQN IVAVNVH GYNQEDSLVMNRASLERGMFRTEH RSYKAEVDN E  E KR K  D
Sbjct: 815  NGQNGIVAVNVHLGYNQEDSLVMNRASLERGMFRTEHTRSYKAEVDNKESSE-KRRKFDD 873

Query: 944  RVDFGK 927
             V FGK
Sbjct: 874  TVSFGK 879


>ref|XP_008452849.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Cucumis melo]
          Length = 1197

 Score =  541 bits (1395), Expect(2) = 0.0
 Identities = 259/304 (85%), Positives = 287/304 (94%)
 Frame = -3

Query: 912  YIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSP 733
            YIGANLQ+GDIVIGRCAESG DHSIKLKHTEKG VQKVVL++ND+G+N+AVVSLRQ+RSP
Sbjct: 885  YIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVSLRQVRSP 944

Query: 732  ILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKG 553
             LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP+RQTPGQLLEAALGKG
Sbjct: 945  CLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKG 1004

Query: 552  IACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQR 373
            IA GGS++YATPF+TPS+D IT+QLHRAGFSRWGSERVYNG++GEMMRSLIFMGPTFYQR
Sbjct: 1005 IAAGGSLKYATPFSTPSVDAITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQR 1064

Query: 372  LNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTL 193
            L HMAEDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFTL
Sbjct: 1065 LIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTL 1124

Query: 192  SDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQEL 13
            SD SQMHVC KC N+A+VIQRSV GG  K+RG YCR C+S ++IV+V++PYGAKLLCQEL
Sbjct: 1125 SDSSQMHVCQKCKNVASVIQRSVAGGR-KIRGPYCRVCESVDDIVRVNVPYGAKLLCQEL 1183

Query: 12   FSMG 1
            FSMG
Sbjct: 1184 FSMG 1187



 Score =  188 bits (477), Expect(2) = 0.0
 Identities = 92/126 (73%), Positives = 103/126 (81%)
 Frame = -1

Query: 1304 KHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYF 1125
            KHS QA+G+STTN N RVDTLS QL+YPQRPLFRTM +DCLG P +     G+L KPE++
Sbjct: 743  KHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFY 802

Query: 1124 NGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKD 945
            NGQNAIVAVNVH GYNQEDSLVMNRASLERGMFR+EH RSYKAEVDN E  E KR K  D
Sbjct: 803  NGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHTRSYKAEVDNKESSE-KRRKSDD 861

Query: 944  RVDFGK 927
             ++FGK
Sbjct: 862  TINFGK 867


>gb|KNA21785.1| hypothetical protein SOVF_039620 [Spinacia oleracea]
          Length = 1213

 Score =  543 bits (1398), Expect(2) = 0.0
 Identities = 257/304 (84%), Positives = 287/304 (94%)
 Frame = -3

Query: 912  YIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSP 733
            YIGANLQ+GDI+IGRCAESGTDHS+KLKHTE+G VQKVVL+AND+G+NFAVVSLRQ+RSP
Sbjct: 901  YIGANLQSGDIIIGRCAESGTDHSVKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSP 960

Query: 732  ILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKG 553
             LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP+RQTPGQLLEAALGKG
Sbjct: 961  CLGDKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKG 1020

Query: 552  IACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQR 373
            IACGGS+RYATPF+T S++ IT QLHRAGFSRWG+ERVYNG++GEM+R+LIFMGPTFYQR
Sbjct: 1021 IACGGSLRYATPFSTLSVEAITEQLHRAGFSRWGNERVYNGRTGEMIRTLIFMGPTFYQR 1080

Query: 372  LNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTL 193
            L HM+EDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFTL
Sbjct: 1081 LIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTL 1140

Query: 192  SDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQEL 13
            SD SQMHVC KC N+ANVIQR+V GG  K+RG YCRFC+S + +VKVS+PYGAKLLCQEL
Sbjct: 1141 SDSSQMHVCRKCKNLANVIQRTVPGG-KKIRGPYCRFCESVDEVVKVSVPYGAKLLCQEL 1199

Query: 12   FSMG 1
            FSMG
Sbjct: 1200 FSMG 1203



 Score =  186 bits (473), Expect(2) = 0.0
 Identities = 93/126 (73%), Positives = 104/126 (82%)
 Frame = -1

Query: 1304 KHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYF 1125
            KHS QA+GYS+TNPNIRVDTLS Q+YYPQRPLFR++ISDCLG      G+N +L   E+F
Sbjct: 759  KHSGQAIGYSSTNPNIRVDTLSHQMYYPQRPLFRSVISDCLGKAEHSLGRNQILPNVEFF 818

Query: 1124 NGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKD 945
            NGQN IVAVNVH GYNQEDSLVMNRASLERGMFRT+H+RSYKAEVDN E  E KR K +D
Sbjct: 819  NGQNGIVAVNVHLGYNQEDSLVMNRASLERGMFRTDHIRSYKAEVDNKESSE-KRRKFED 877

Query: 944  RVDFGK 927
             V FGK
Sbjct: 878  TVSFGK 883


>ref|XP_010046894.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Eucalyptus grandis] gi|629113927|gb|KCW78602.1|
            hypothetical protein EUGRSUZ_C00069 [Eucalyptus grandis]
          Length = 1188

 Score =  539 bits (1389), Expect(2) = 0.0
 Identities = 256/304 (84%), Positives = 287/304 (94%)
 Frame = -3

Query: 912  YIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSP 733
            ++GAN+Q+GDIVIGRCAESG DHSIKLKHTE+G VQKVVL+AND+G+NFAVVSLRQ+RSP
Sbjct: 876  FVGANMQSGDIVIGRCAESGADHSIKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSP 935

Query: 732  ILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKG 553
             LGDKF+SMHGQKGV+G LESQENFPFT QGIVPD+VINPHAFP+RQTPGQLLEAALGKG
Sbjct: 936  CLGDKFASMHGQKGVLGFLESQENFPFTVQGIVPDVVINPHAFPSRQTPGQLLEAALGKG 995

Query: 552  IACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQR 373
            IA GG V+YATPF+TPS+++ITNQLHRAGFSRWG+ERVYNG++GEM+RSLIFMGPTFYQR
Sbjct: 996  IALGGPVKYATPFSTPSVEDITNQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQR 1055

Query: 372  LNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTL 193
            L HMAEDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFTL
Sbjct: 1056 LIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTL 1115

Query: 192  SDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQEL 13
            SD SQMHVC KC N+ANVIQR V GG  K+RG YCR CDSA++IVKV++PYGAKLLCQEL
Sbjct: 1116 SDSSQMHVCQKCKNMANVIQRPVPGGR-KIRGPYCRTCDSADDIVKVNVPYGAKLLCQEL 1174

Query: 12   FSMG 1
            FSMG
Sbjct: 1175 FSMG 1178



 Score =  189 bits (479), Expect(2) = 0.0
 Identities = 91/126 (72%), Positives = 107/126 (84%)
 Frame = -1

Query: 1304 KHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYF 1125
            KHSQQ +G+STTNPNIRVDTLS QLYYPQRPLFRTMISDCLG      G  G+L KPE++
Sbjct: 734  KHSQQGIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMISDCLGKQGNSLGNKGMLPKPEFY 793

Query: 1124 NGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKD 945
            NGQNAIVAVNVH GYNQEDSLVMNRAS+ERGMFR+EH+RSYKA+V+N E  + K+ + +D
Sbjct: 794  NGQNAIVAVNVHLGYNQEDSLVMNRASMERGMFRSEHIRSYKADVENKE-SQQKKHRSED 852

Query: 944  RVDFGK 927
             ++FGK
Sbjct: 853  SINFGK 858


>ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508782080|gb|EOY29336.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 1184

 Score =  528 bits (1361), Expect(2) = 0.0
 Identities = 251/304 (82%), Positives = 282/304 (92%)
 Frame = -3

Query: 912  YIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSP 733
            Y+GANLQ GDIVIGRCAESG DHSIKLKHTE+G VQKVVL++ND+G+N+AVVSLRQ+RSP
Sbjct: 872  YVGANLQCGDIVIGRCAESGADHSIKLKHTERGMVQKVVLSSNDDGKNYAVVSLRQVRSP 931

Query: 732  ILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKG 553
             LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP+RQTPGQLLEAALGKG
Sbjct: 932  CLGDKFSSMHGQKGVLGFLESQENFPFTTQGIVPDIVINPHAFPSRQTPGQLLEAALGKG 991

Query: 552  IACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQR 373
            IACGGS++YATPF+T S+D IT QLHRAGFSRWG+ERVYNG++GEM+RSLIFMGPTFYQR
Sbjct: 992  IACGGSMKYATPFSTISVDAITEQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQR 1051

Query: 372  LNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTL 193
            L HMAEDKVK+RNTGPVHPLTRQPVADRKR+GG+KFGEMERDCL+AHGASANLHERL TL
Sbjct: 1052 LIHMAEDKVKFRNTGPVHPLTRQPVADRKRYGGIKFGEMERDCLIAHGASANLHERLVTL 1111

Query: 192  SDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQEL 13
            SD SQMHVC  C N+ANVI+R+V GG  K+RG YCR C S ++IV+V++PYGAKLLCQEL
Sbjct: 1112 SDSSQMHVCRNCKNVANVIERAVPGGR-KIRGPYCRGCQSVDDIVRVNVPYGAKLLCQEL 1170

Query: 12   FSMG 1
            FSMG
Sbjct: 1171 FSMG 1174



 Score =  199 bits (506), Expect(2) = 0.0
 Identities = 100/126 (79%), Positives = 109/126 (86%)
 Frame = -1

Query: 1304 KHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYF 1125
            KHSQQA+G+STTNPNIRVDTLS QLYYPQRPLFRTM SDCLG    P GQ GVL KPE +
Sbjct: 730  KHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMTSDCLGKLGHPLGQKGVLPKPELY 789

Query: 1124 NGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKD 945
            NGQNAIVAVNVH GYNQEDSLVMNR+SLERGMFR+EHVRSYKAEVDN E+ + KR K +D
Sbjct: 790  NGQNAIVAVNVHLGYNQEDSLVMNRSSLERGMFRSEHVRSYKAEVDNKEI-QDKRRKSED 848

Query: 944  RVDFGK 927
             V+FGK
Sbjct: 849  IVNFGK 854


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Vitis vinifera] gi|731386102|ref|XP_010648748.1|
            PREDICTED: DNA-directed RNA polymerases IV and V subunit
            2-like [Vitis vinifera]
          Length = 1198

 Score =  527 bits (1358), Expect(2) = 0.0
 Identities = 250/304 (82%), Positives = 283/304 (93%)
 Frame = -3

Query: 912  YIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSP 733
            +IGANLQ GDIVIGRCAESG DHSIKLKHTE+G VQKVV++AND+G+NFAVVSLRQ+R+P
Sbjct: 886  FIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVVSLRQVRTP 945

Query: 732  ILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKG 553
             LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP+RQTPGQLLEAALGKG
Sbjct: 946  CLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKG 1005

Query: 552  IACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQR 373
            IACGG +R+ATPF+T S+D I +QLHRAGFSRWG ERVYNG++GEM+RSLIFMGPTFYQR
Sbjct: 1006 IACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTGEMLRSLIFMGPTFYQR 1065

Query: 372  LNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTL 193
            L HMAEDKVK+RNTGPVHPLTRQPV+DRKRFGG+KFGEMERDCL+AHGA+ANLHERLFTL
Sbjct: 1066 LIHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGEMERDCLIAHGAAANLHERLFTL 1125

Query: 192  SDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQEL 13
            SD + MH+C +C NI+NVIQRSV GG  K+RG YCR+C+S+E IVKV++PYGAKLLCQEL
Sbjct: 1126 SDSAYMHICRRCKNISNVIQRSVAGGR-KVRGPYCRYCESSEEIVKVNVPYGAKLLCQEL 1184

Query: 12   FSMG 1
            FSMG
Sbjct: 1185 FSMG 1188



 Score =  200 bits (508), Expect(2) = 0.0
 Identities = 97/126 (76%), Positives = 109/126 (86%)
 Frame = -1

Query: 1304 KHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYF 1125
            KHSQQA+G+STTNPNIRVDTLS QLYYPQRPLFRTMISDCLG P + +G  G++ +PEYF
Sbjct: 744  KHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMISDCLGKPGYSEGHKGIVPRPEYF 803

Query: 1124 NGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKD 945
            NGQ AIVAVNVH GYNQEDSLVMNRASLERGMFR+EH+RSYK+EVDN E  + KR K +D
Sbjct: 804  NGQIAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKSEVDNNESLDKKR-KSED 862

Query: 944  RVDFGK 927
             V FGK
Sbjct: 863  SVHFGK 868


>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Cucumis
            sativus] gi|700200271|gb|KGN55429.1| hypothetical protein
            Csa_4G651950 [Cucumis sativus]
          Length = 1197

 Score =  541 bits (1393), Expect(2) = 0.0
 Identities = 259/304 (85%), Positives = 287/304 (94%)
 Frame = -3

Query: 912  YIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSP 733
            YIGANLQ+GDIVIGRCAESG DHSIKLKHTEKG VQKVVL++ND+G+N+AVVSLRQ+RSP
Sbjct: 885  YIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVSLRQVRSP 944

Query: 732  ILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKG 553
             LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP+RQTPGQLLEAALGKG
Sbjct: 945  CLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKG 1004

Query: 552  IACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQR 373
            IA GGS++YATPF+TPS+D IT+QLHRAGFSRWGSERVYNG++GEMMRSLIFMGPTFYQR
Sbjct: 1005 IAAGGSLKYATPFSTPSVDAITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQR 1064

Query: 372  LNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTL 193
            L HMAEDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFTL
Sbjct: 1065 LIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTL 1124

Query: 192  SDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQEL 13
            SD SQMHVC KC N+A+VIQRSV GG  K+RG YCR C+S ++IV+V++PYGAKLLCQEL
Sbjct: 1125 SDSSQMHVCQKCKNVASVIQRSVAGGR-KMRGPYCRVCESFDDIVRVNVPYGAKLLCQEL 1183

Query: 12   FSMG 1
            FSMG
Sbjct: 1184 FSMG 1187



 Score =  186 bits (472), Expect(2) = 0.0
 Identities = 91/126 (72%), Positives = 103/126 (81%)
 Frame = -1

Query: 1304 KHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYF 1125
            KHS QA+G+S TN N RVDTLS QL+YPQRPLFRTM +DCLG P +     G+L KPE++
Sbjct: 743  KHSNQAIGFSPTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHAGILPKPEFY 802

Query: 1124 NGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKD 945
            NGQNAIVAVNVH GYNQEDSLVMNRASLERGMFR+EH+RSYKAEVDN E  E KR K  D
Sbjct: 803  NGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSE-KRRKSDD 861

Query: 944  RVDFGK 927
             ++FGK
Sbjct: 862  AINFGK 867


>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron macrophyllum]
          Length = 1019

 Score =  532 bits (1371), Expect(2) = 0.0
 Identities = 251/304 (82%), Positives = 283/304 (93%)
 Frame = -3

Query: 912  YIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSP 733
            +IGANLQ GDIV+GRCAESG DHSIKLKHTE+G VQKVVL+ANDEG+NFAVVSLRQ+R+P
Sbjct: 707  FIGANLQNGDIVVGRCAESGADHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRTP 766

Query: 732  ILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKG 553
             LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDIV+NPHAFP+RQTPGQLLEAALGKG
Sbjct: 767  CLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVVNPHAFPSRQTPGQLLEAALGKG 826

Query: 552  IACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQR 373
            IACGG  +YATPF+T S+D +T+QLHRAGFSRWGSERVYNG++GEM+ SL+FMGPTFYQR
Sbjct: 827  IACGGLQKYATPFSTLSVDAVTDQLHRAGFSRWGSERVYNGRTGEMIHSLVFMGPTFYQR 886

Query: 372  LNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTL 193
            L HM+EDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGA+ANLHERLFTL
Sbjct: 887  LTHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTL 946

Query: 192  SDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQEL 13
            SD SQMH+C KC+NIANVIQR+V GG  K+RG YCRFC+S E IV+V++PYGAKLL QEL
Sbjct: 947  SDSSQMHICRKCNNIANVIQRAVPGGR-KIRGPYCRFCESVEEIVRVNVPYGAKLLAQEL 1005

Query: 12   FSMG 1
            FSMG
Sbjct: 1006 FSMG 1009



 Score =  194 bits (492), Expect(2) = 0.0
 Identities = 93/126 (73%), Positives = 108/126 (85%)
 Frame = -1

Query: 1304 KHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYF 1125
            KHSQQA+G++TTNPNIRVDT + QLYYPQRPLFRTM+SDCLG P +P G NG++ + EYF
Sbjct: 565  KHSQQAMGFNTTNPNIRVDTNTHQLYYPQRPLFRTMVSDCLGKPGYPLGHNGIVPRAEYF 624

Query: 1124 NGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKD 945
            NGQ AIVAVNVH GYNQEDSLVMNRASLERGMFR+EH+RSYKA+VDN E    K+ K +D
Sbjct: 625  NGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKADVDNKESV-GKKPKFED 683

Query: 944  RVDFGK 927
             V+FGK
Sbjct: 684  SVNFGK 689


>ref|XP_010937061.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Elaeis guineensis]
          Length = 1189

 Score =  526 bits (1356), Expect(2) = 0.0
 Identities = 256/304 (84%), Positives = 278/304 (91%)
 Frame = -3

Query: 912  YIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSP 733
            YIGA+LQ+GDIVIG+ AESG DH IKLKHTEKG VQKVVL+ANDEG+NFAVV+LRQ+RSP
Sbjct: 877  YIGASLQSGDIVIGKVAESGEDHGIKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSP 936

Query: 732  ILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKG 553
             LGDKFSSMHGQKGVVG LESQENFPFT QGIVPDIVINPHAFPTRQTPGQLLEAALGKG
Sbjct: 937  CLGDKFSSMHGQKGVVGFLESQENFPFTCQGIVPDIVINPHAFPTRQTPGQLLEAALGKG 996

Query: 552  IACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQR 373
            IACGGSVRYATPFTT S+D IT QLHRAGFSRWGSE+V NG++GE+MRS+IFMGPTFYQR
Sbjct: 997  IACGGSVRYATPFTTASVDVITEQLHRAGFSRWGSEKVLNGRTGEVMRSMIFMGPTFYQR 1056

Query: 372  LNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTL 193
            L HMAEDKVK+RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGA++NLHERLF L
Sbjct: 1057 LIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAASNLHERLFML 1116

Query: 192  SDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQEL 13
            SDFSQMH+C  C   ANVI R V GGN K+RG YC FC S+ENIVK+++PYGAKLL QEL
Sbjct: 1117 SDFSQMHICQTCRRAANVILRPVVGGN-KIRGPYCNFCQSSENIVKINVPYGAKLLYQEL 1175

Query: 12   FSMG 1
            FSMG
Sbjct: 1176 FSMG 1179



 Score =  197 bits (502), Expect(2) = 0.0
 Identities = 96/126 (76%), Positives = 108/126 (85%)
 Frame = -1

Query: 1304 KHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYF 1125
            KHSQQA+G+STTNPNIRVDTLS QLYYPQ+PLFRT+I+DCLG      G+   + +PEYF
Sbjct: 736  KHSQQAIGFSTTNPNIRVDTLSHQLYYPQKPLFRTVIADCLGRAVHSLGRKDSMPRPEYF 795

Query: 1124 NGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKD 945
            NGQNAIVAVNVH GYNQEDSLVMNRASLERGMFRTEH RSYKAEV+N EL   KR K++D
Sbjct: 796  NGQNAIVAVNVHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEVENKEL--TKRFKLRD 853

Query: 944  RVDFGK 927
            +VDFGK
Sbjct: 854  KVDFGK 859


>ref|XP_008784482.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Phoenix dactylifera]
          Length = 1189

 Score =  528 bits (1360), Expect(2) = 0.0
 Identities = 256/304 (84%), Positives = 279/304 (91%)
 Frame = -3

Query: 912  YIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSP 733
            YIGA+LQ+GDIVIG+ AESG DH IKLKHTEKG VQKVVL+ANDEG+NFAVV+LRQ+RSP
Sbjct: 877  YIGASLQSGDIVIGKVAESGEDHGIKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSP 936

Query: 732  ILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKG 553
             LGDKFSSMHGQKGVVG LESQENFPFT QGIVPDIVINPHAFPTRQTPGQLLEAALGKG
Sbjct: 937  CLGDKFSSMHGQKGVVGFLESQENFPFTCQGIVPDIVINPHAFPTRQTPGQLLEAALGKG 996

Query: 552  IACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQR 373
            IACGGSVRYATPFTT S+D IT QLHRAGFSRWGSE+V NG++GE+MRS+IFMGPTFYQR
Sbjct: 997  IACGGSVRYATPFTTASVDVITEQLHRAGFSRWGSEKVLNGRTGEVMRSMIFMGPTFYQR 1056

Query: 372  LNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTL 193
            L HMAEDKVK+RNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGA++NLHERLFTL
Sbjct: 1057 LIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAASNLHERLFTL 1116

Query: 192  SDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQEL 13
            SDFSQMH+C  C   ANVI R V GGN K+RG YC +C S+ENIVK+++PYGAKLL QEL
Sbjct: 1117 SDFSQMHICQTCKRAANVILRPVVGGN-KIRGPYCNYCQSSENIVKINVPYGAKLLYQEL 1175

Query: 12   FSMG 1
            FSMG
Sbjct: 1176 FSMG 1179



 Score =  195 bits (496), Expect(2) = 0.0
 Identities = 95/126 (75%), Positives = 108/126 (85%)
 Frame = -1

Query: 1304 KHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYF 1125
            KHSQQA+G+STTNPNIRVDTLS QLYYPQ+PLFRT+I+DCLG   +   +   + +PEYF
Sbjct: 736  KHSQQAIGFSTTNPNIRVDTLSHQLYYPQKPLFRTVIADCLGRADYSLRRKDSMPRPEYF 795

Query: 1124 NGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKD 945
            NGQNAIVAVNVH GYNQEDSLVMNRASLERGMFRTEH RSYKAEV+N EL   KR K++D
Sbjct: 796  NGQNAIVAVNVHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEVENKEL--TKRFKLRD 853

Query: 944  RVDFGK 927
            +VDFGK
Sbjct: 854  KVDFGK 859


>ref|XP_007011718.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao]
            gi|508782081|gb|EOY29337.1| DNA-directed RNA polymerase
            isoform 2 [Theobroma cacao]
          Length = 961

 Score =  523 bits (1346), Expect(2) = 0.0
 Identities = 251/308 (81%), Positives = 282/308 (91%), Gaps = 4/308 (1%)
 Frame = -3

Query: 912  YIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSP 733
            Y+GANLQ GDIVIGRCAESG DHSIKLKHTE+G VQKVVL++ND+G+N+AVVSLRQ+RSP
Sbjct: 645  YVGANLQCGDIVIGRCAESGADHSIKLKHTERGMVQKVVLSSNDDGKNYAVVSLRQVRSP 704

Query: 732  ILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKG 553
             LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP+RQTPGQLLEAALGKG
Sbjct: 705  CLGDKFSSMHGQKGVLGFLESQENFPFTTQGIVPDIVINPHAFPSRQTPGQLLEAALGKG 764

Query: 552  IACGGSVRYATPFTTPSIDEITNQL----HRAGFSRWGSERVYNGQSGEMMRSLIFMGPT 385
            IACGGS++YATPF+T S+D IT QL    HRAGFSRWG+ERVYNG++GEM+RSLIFMGPT
Sbjct: 765  IACGGSMKYATPFSTISVDAITEQLHSICHRAGFSRWGNERVYNGRTGEMVRSLIFMGPT 824

Query: 384  FYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHER 205
            FYQRL HMAEDKVK+RNTGPVHPLTRQPVADRKR+GG+KFGEMERDCL+AHGASANLHER
Sbjct: 825  FYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRYGGIKFGEMERDCLIAHGASANLHER 884

Query: 204  LFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLL 25
            L TLSD SQMHVC  C N+ANVI+R+V GG  K+RG YCR C S ++IV+V++PYGAKLL
Sbjct: 885  LVTLSDSSQMHVCRNCKNVANVIERAVPGGR-KIRGPYCRGCQSVDDIVRVNVPYGAKLL 943

Query: 24   CQELFSMG 1
            CQELFSMG
Sbjct: 944  CQELFSMG 951



 Score =  199 bits (506), Expect(2) = 0.0
 Identities = 100/126 (79%), Positives = 109/126 (86%)
 Frame = -1

Query: 1304 KHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYF 1125
            KHSQQA+G+STTNPNIRVDTLS QLYYPQRPLFRTM SDCLG    P GQ GVL KPE +
Sbjct: 503  KHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMTSDCLGKLGHPLGQKGVLPKPELY 562

Query: 1124 NGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKD 945
            NGQNAIVAVNVH GYNQEDSLVMNR+SLERGMFR+EHVRSYKAEVDN E+ + KR K +D
Sbjct: 563  NGQNAIVAVNVHLGYNQEDSLVMNRSSLERGMFRSEHVRSYKAEVDNKEI-QDKRRKSED 621

Query: 944  RVDFGK 927
             V+FGK
Sbjct: 622  IVNFGK 627


>ref|XP_012452401.1| PREDICTED: DNA-directed RNA polymerase D subunit 2b-like [Gossypium
            raimondii] gi|763740193|gb|KJB07692.1| hypothetical
            protein B456_001G037900 [Gossypium raimondii]
          Length = 1204

 Score =  520 bits (1338), Expect(2) = 0.0
 Identities = 250/304 (82%), Positives = 277/304 (91%)
 Frame = -3

Query: 912  YIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSP 733
            YIGA+LQ+GDIVIGR AESG DH +KLKHTE+G VQKVVL++ND+G+NFAVVSLRQ+RSP
Sbjct: 892  YIGASLQSGDIVIGRFAESGADHGVKLKHTERGMVQKVVLSSNDDGKNFAVVSLRQVRSP 951

Query: 732  ILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKG 553
             LGDKFSSMHGQKGV+G LES ENFPFT QGIVPDIVINPHAFP+RQTPGQLLEAALGKG
Sbjct: 952  CLGDKFSSMHGQKGVLGFLESHENFPFTTQGIVPDIVINPHAFPSRQTPGQLLEAALGKG 1011

Query: 552  IACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQR 373
            IACGGS ++ATPF+T SID IT QLHRAGFSRWG+ERVYNG++GEM+RSLIFMGPTFYQR
Sbjct: 1012 IACGGSKKHATPFSTLSIDAITEQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQR 1071

Query: 372  LNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTL 193
            L HMAEDKVK+RNTGPVHPLTRQPVADRKR+GG+KFGEMERDCL+AHGASANLHERLFTL
Sbjct: 1072 LVHMAEDKVKFRNTGPVHPLTRQPVADRKRYGGIKFGEMERDCLIAHGASANLHERLFTL 1131

Query: 192  SDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQEL 13
            SD SQMHVC  C N ANVI+R+V  G  K+RG YCR C S + IVKVS+PYGAKLLCQEL
Sbjct: 1132 SDCSQMHVCQNCKNAANVIERTVAAGR-KIRGPYCRVCQSGDEIVKVSVPYGAKLLCQEL 1190

Query: 12   FSMG 1
            FSMG
Sbjct: 1191 FSMG 1194



 Score =  197 bits (502), Expect(2) = 0.0
 Identities = 98/126 (77%), Positives = 108/126 (85%)
 Frame = -1

Query: 1304 KHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYF 1125
            KHSQQA+G+STTNPNIRVDTLS Q+YYPQRPLF TM +DCLG   FP GQN +  KPE +
Sbjct: 750  KHSQQAIGFSTTNPNIRVDTLSHQMYYPQRPLFHTMTADCLGKSGFPLGQNRLEPKPELY 809

Query: 1124 NGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKD 945
            NGQNAIVAVNVH GYNQEDSLVMNRAS+ERGMFRTEHVRSYKAEVDN E+ E KR K +D
Sbjct: 810  NGQNAIVAVNVHLGYNQEDSLVMNRASIERGMFRTEHVRSYKAEVDNKEIQE-KRRKAED 868

Query: 944  RVDFGK 927
             V+FGK
Sbjct: 869  IVNFGK 874


>gb|KHG03399.1| DNA-directed RNA polymerase D subunit 2a -like protein [Gossypium
            arboreum]
          Length = 1204

 Score =  518 bits (1334), Expect(2) = 0.0
 Identities = 249/304 (81%), Positives = 276/304 (90%)
 Frame = -3

Query: 912  YIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSP 733
            YIGA+LQ+GDIVIGR AESG DH +KLKHTE+G VQKVVL++ND+G+NFAVVSLRQ+RSP
Sbjct: 892  YIGASLQSGDIVIGRFAESGADHGVKLKHTERGMVQKVVLSSNDDGKNFAVVSLRQVRSP 951

Query: 732  ILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKG 553
             LGDKFSSMHGQKGV+G LES ENFPFT QGIVPDIVINPHAFP+RQTPGQLLEAALGKG
Sbjct: 952  CLGDKFSSMHGQKGVLGFLESHENFPFTTQGIVPDIVINPHAFPSRQTPGQLLEAALGKG 1011

Query: 552  IACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQR 373
            IACGGS ++ATPF+T SID IT QLHR GFSRWG+ERVYNG++GEM+RSLIFMGPTFYQR
Sbjct: 1012 IACGGSKKHATPFSTLSIDAITEQLHRVGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQR 1071

Query: 372  LNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTL 193
            L HMAEDKVK+RNTGPVHPLTRQPVADRKR+GG+KFGEMERDCL+AHGASANLHERLFTL
Sbjct: 1072 LVHMAEDKVKFRNTGPVHPLTRQPVADRKRYGGIKFGEMERDCLIAHGASANLHERLFTL 1131

Query: 192  SDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQEL 13
            SD SQMHVC  C N ANVI+R+V  G  K+RG YCR C S + IVKVS+PYGAKLLCQEL
Sbjct: 1132 SDCSQMHVCQNCKNAANVIERTVAAGR-KIRGPYCRVCQSGDEIVKVSVPYGAKLLCQEL 1190

Query: 12   FSMG 1
            FSMG
Sbjct: 1191 FSMG 1194



 Score =  199 bits (505), Expect(2) = 0.0
 Identities = 99/126 (78%), Positives = 108/126 (85%)
 Frame = -1

Query: 1304 KHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYF 1125
            KHSQQA+G+STTNPNIRVDTLS Q+YYPQRPLF TM SDCLG   FP GQN +  KPE +
Sbjct: 750  KHSQQAIGFSTTNPNIRVDTLSHQMYYPQRPLFHTMTSDCLGKSGFPLGQNRLEPKPELY 809

Query: 1124 NGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKD 945
            NGQNAIVAVNVH GYNQEDSLVMNRAS+ERGMFRTEHVRSYKAEVDN E+ E KR K +D
Sbjct: 810  NGQNAIVAVNVHLGYNQEDSLVMNRASIERGMFRTEHVRSYKAEVDNKEIQE-KRRKAED 868

Query: 944  RVDFGK 927
             V+FGK
Sbjct: 869  IVNFGK 874


>ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Fragaria vesca subsp. vesca]
          Length = 1201

 Score =  523 bits (1347), Expect(2) = 0.0
 Identities = 249/303 (82%), Positives = 282/303 (93%)
 Frame = -3

Query: 909  IGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSPI 730
            +GA+LQ+GDI+IGRC+ESGTDHSIKLKHTE+G VQKVVL++ND G+NFAVVSLRQ+RSP 
Sbjct: 890  VGASLQSGDIIIGRCSESGTDHSIKLKHTERGMVQKVVLSSNDAGKNFAVVSLRQVRSPS 949

Query: 729  LGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKGI 550
            LGDKFSSMHGQKGV+G LE QENFPFT QGIVPDIVINPHAFP+RQTPGQLLEAALGKGI
Sbjct: 950  LGDKFSSMHGQKGVLGFLEYQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGI 1009

Query: 549  ACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQRL 370
            ACGGS RYATPF+T S+D+IT+QLHRAGFSRWG+ERVYNG++GEM+R LIFMGPTFYQRL
Sbjct: 1010 ACGGSKRYATPFSTLSVDDITDQLHRAGFSRWGNERVYNGRTGEMVRQLIFMGPTFYQRL 1069

Query: 369  NHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLS 190
             HM+EDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFTLS
Sbjct: 1070 IHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLS 1129

Query: 189  DFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQELF 10
            D S M+VC KC N ANVI+R + GG  K+RG YCR CDSA++IV+V++PYGAKLLCQELF
Sbjct: 1130 DSSLMNVCQKCQNAANVIERKLTGGR-KIRGPYCRVCDSADDIVRVNVPYGAKLLCQELF 1188

Query: 9    SMG 1
            SMG
Sbjct: 1189 SMG 1191



 Score =  194 bits (492), Expect(2) = 0.0
 Identities = 95/126 (75%), Positives = 108/126 (85%)
 Frame = -1

Query: 1304 KHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYF 1125
            KHSQQA+GYSTTNPN+RVDTLS  L+YPQRPLFRTMI+D LG P +P G NG + KPEYF
Sbjct: 747  KHSQQAIGYSTTNPNLRVDTLSHNLHYPQRPLFRTMIADSLGKPGYPVGHNGFMPKPEYF 806

Query: 1124 NGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKD 945
            NGQNAIVAVNVH GYNQEDS+VMNRASLERGMFR+EH+RSYKAEV+N +L   KR K  +
Sbjct: 807  NGQNAIVAVNVHLGYNQEDSIVMNRASLERGMFRSEHIRSYKAEVEN-KLSLEKRRKPDE 865

Query: 944  RVDFGK 927
             V+FGK
Sbjct: 866  CVNFGK 871


>ref|XP_002324332.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|550317882|gb|EEF02897.2| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1181

 Score =  531 bits (1369), Expect(2) = 0.0
 Identities = 251/304 (82%), Positives = 284/304 (93%)
 Frame = -3

Query: 912  YIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSP 733
            +IGAN+Q+GDIVIG+CAESG DHS+KLKHTE+G VQKVVL++NDEG+NFAVVSLRQ+RSP
Sbjct: 869  FIGANMQSGDIVIGKCAESGADHSVKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSP 928

Query: 732  ILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKG 553
             LGDKFSSMHGQKGV+G LESQENFPFT QG+VPDIVINPHAFP+RQTPGQLLEAALGKG
Sbjct: 929  CLGDKFSSMHGQKGVLGFLESQENFPFTIQGVVPDIVINPHAFPSRQTPGQLLEAALGKG 988

Query: 552  IACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQR 373
            IACGGS RYATPF+T S+D+I +QLHRA FSRWG+ERVYNG++GEM+RSLIFMGPTFYQR
Sbjct: 989  IACGGSKRYATPFSTLSVDDIIDQLHRAKFSRWGNERVYNGRTGEMVRSLIFMGPTFYQR 1048

Query: 372  LNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTL 193
            L HMAEDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFTL
Sbjct: 1049 LVHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTL 1108

Query: 192  SDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQEL 13
            SD S+MH+C KC N+ANVIQR V GG  K+RG YCR C+S +++VKVS+PYGAKLLCQEL
Sbjct: 1109 SDSSEMHICQKCKNVANVIQRGVPGGR-KIRGPYCRVCESVDDLVKVSVPYGAKLLCQEL 1167

Query: 12   FSMG 1
            FSMG
Sbjct: 1168 FSMG 1171



 Score =  185 bits (469), Expect(2) = 0.0
 Identities = 96/126 (76%), Positives = 104/126 (82%)
 Frame = -1

Query: 1304 KHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYF 1125
            KHSQQA+G+STTNPNIRVDTLS QL+YPQRPLFRTMISDCL LP           KPE F
Sbjct: 738  KHSQQAIGFSTTNPNIRVDTLSHQLHYPQRPLFRTMISDCLVLP-----------KPELF 786

Query: 1124 NGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKD 945
            NGQNAIVAVNVH GYNQEDSLVMNRASLERGMFR+EH+RSYKAEVDN EL + KR K +D
Sbjct: 787  NGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKELTD-KRRKSED 845

Query: 944  RVDFGK 927
             + FGK
Sbjct: 846  SITFGK 851


>ref|XP_012076429.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Jatropha curcas] gi|802626342|ref|XP_012076430.1|
            PREDICTED: DNA-directed RNA polymerases IV and V subunit
            2-like [Jatropha curcas] gi|643724314|gb|KDP33515.1|
            hypothetical protein JCGZ_07086 [Jatropha curcas]
          Length = 1209

 Score =  518 bits (1334), Expect(2) = 0.0
 Identities = 247/304 (81%), Positives = 281/304 (92%)
 Frame = -3

Query: 912  YIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSP 733
            +IGANLQ+GDIVIGR AESG DHSIKLKHTE+G VQKVVL++NDEG+NFAVVSLRQ+RSP
Sbjct: 897  FIGANLQSGDIVIGRFAESGADHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSP 956

Query: 732  ILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKG 553
             LGDKFSSMHGQKGV+G LESQENFPFT  G+VPDIVINPHAFP+RQTPGQLLEAALGKG
Sbjct: 957  CLGDKFSSMHGQKGVLGFLESQENFPFTKDGVVPDIVINPHAFPSRQTPGQLLEAALGKG 1016

Query: 552  IACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQR 373
            IACGG +RYATPF+T S++ IT+QLHRAGFSRWG+E+V NG++GEM+RSLIFMGPTFYQR
Sbjct: 1017 IACGGPMRYATPFSTLSVEAITDQLHRAGFSRWGNEKVCNGRTGEMVRSLIFMGPTFYQR 1076

Query: 372  LNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTL 193
            L HMAEDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFTL
Sbjct: 1077 LIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTL 1136

Query: 192  SDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQEL 13
            SD SQMH+C  C N+ANVI+R+V   + K+R  YCR C+SA++IVKV++PYGAKLLCQEL
Sbjct: 1137 SDSSQMHICQNCKNVANVIERTVP-PSRKIRAPYCRICESADDIVKVNVPYGAKLLCQEL 1195

Query: 12   FSMG 1
            FSMG
Sbjct: 1196 FSMG 1199



 Score =  197 bits (500), Expect(2) = 0.0
 Identities = 95/126 (75%), Positives = 110/126 (87%)
 Frame = -1

Query: 1304 KHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYF 1125
            KHSQQA+G+ TTNPNIRVDTLS QL+YPQRPLFRT+ +DCLG P + +G +G+L KPE F
Sbjct: 755  KHSQQAIGFPTTNPNIRVDTLSHQLHYPQRPLFRTVTADCLGKPGYARGHHGMLPKPELF 814

Query: 1124 NGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKD 945
            NGQNAIVAVNVH GYNQEDSLVMNRASLERGMFR+EH+RSYKA+VDN EL + KR K +D
Sbjct: 815  NGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKADVDNKELLD-KRRKFED 873

Query: 944  RVDFGK 927
             V+FGK
Sbjct: 874  TVNFGK 879


>ref|XP_009605686.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Nicotiana tomentosiformis]
          Length = 1220

 Score =  520 bits (1340), Expect(2) = 0.0
 Identities = 248/304 (81%), Positives = 281/304 (92%)
 Frame = -3

Query: 912  YIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSP 733
            +IGANLQ+GDI+IG+ AESG DHS+KLKHTE+G VQKV+L+ANDEG+NFAVVSLRQ+RSP
Sbjct: 909  FIGANLQSGDIIIGKHAESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLRQVRSP 968

Query: 732  ILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKG 553
             LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP+RQTPGQLLEAALGKG
Sbjct: 969  CLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQLLEAALGKG 1028

Query: 552  IACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQR 373
            IA GG  +YATPF+T S+D I  QLH  GFS+WG+ERVYNG++GEM+++LIFMGPTFYQR
Sbjct: 1029 IALGGGQKYATPFSTLSVDAIIEQLHGRGFSKWGNERVYNGRTGEMVQNLIFMGPTFYQR 1088

Query: 372  LNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTL 193
            L HMAEDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGA+ANLHERLFTL
Sbjct: 1089 LIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTL 1148

Query: 192  SDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQEL 13
            SD SQMH+C KC N+ANVIQRSVQGG  K+RG YCRFC+S E+IVKV++PYGAKLLCQEL
Sbjct: 1149 SDSSQMHICGKCKNMANVIQRSVQGG--KVRGPYCRFCESVEDIVKVNVPYGAKLLCQEL 1206

Query: 12   FSMG 1
            FSMG
Sbjct: 1207 FSMG 1210



 Score =  191 bits (486), Expect(2) = 0.0
 Identities = 94/126 (74%), Positives = 108/126 (85%)
 Frame = -1

Query: 1304 KHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYF 1125
            KHSQQA+G+ST NPNIRVDT + QLYYPQRPLFRTM+SD LG P + + Q G+L +PEY+
Sbjct: 767  KHSQQAIGFSTVNPNIRVDTNTHQLYYPQRPLFRTMLSDSLGKPKYARCQKGMLPRPEYY 826

Query: 1124 NGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKD 945
            NGQ AIVAVNVH GYNQEDSLVMNRASLERGMFR+EHVRSYKAEVDN E    K+LK++D
Sbjct: 827  NGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAI-GKKLKIED 885

Query: 944  RVDFGK 927
             V+FGK
Sbjct: 886  SVNFGK 891