BLASTX nr result

ID: Papaver29_contig00010639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00010639
         (988 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012836426.1| PREDICTED: DNA-directed RNA polymerase V sub...    58   5e-07
ref|XP_012836427.1| PREDICTED: DNA-directed RNA polymerase V sub...    58   5e-07
ref|XP_001449252.1| hypothetical protein [Paramecium tetraurelia...    49   2e-06

>ref|XP_012836426.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
            [Erythranthe guttatus] gi|604334092|gb|EYU38281.1|
            hypothetical protein MIMGU_mgv1a000048mg [Erythranthe
            guttata]
          Length = 2113

 Score = 57.8 bits (138), Expect(2) = 5e-07
 Identities = 72/288 (25%), Positives = 107/288 (37%), Gaps = 23/288 (7%)
 Frame = -3

Query: 953  GGWNTND---SWGGQAKANSTGGWNTKKQPSQDDPNDSWGGQVEKANTTGG-WNTKT*PS 786
            G W   D   +WG   KA S GG   KK     D   +WG  V+KA + GG W  K   S
Sbjct: 1584 GDWAKKDEPSTWGNAKKAGSDGGDWAKK-----DEQSTWGN-VKKAGSDGGDWAKKDEQS 1637

Query: 785  ---QAEPRDSCGGLVEKTNTTGGWNTETQSSQDEPPW*SRQKKPTQLLVGIPRRSHPRLN 615
                 +   S GG   K +    W    ++  D   W    KK  Q   G  + S  +  
Sbjct: 1638 TWGNVKKAGSDGGDWAKKDEQSTWGNVKKAGSDGGDW---AKKDEQSTWGNVKASQIQ-- 1692

Query: 614  LMILGEDLWKNQHNWWLEY---EDAVIPG*SS*FLGRIC*KNQHNWWLECPKAATDDPSD 444
                      N+  W  +    E+   P      L     K + + W     + T + S 
Sbjct: 1693 ----------NKSTWGRDAAPTENVSSPKSQEDGLWSSAQKGEQSTWGHVKTSQTQNKS- 1741

Query: 443  SWGGHVEKANATG*NGKERNGLWNQWSEPPKNETVTTNNKSAGTWGTIMAGEHVNQPVDS 264
            +WGG             + +GLW+  S   K +  + +N     W T +A +  ++P+ +
Sbjct: 1742 TWGGDTAPIENVPSPKSQEDGLWSSASAAQKEQDGSKDNNP---WQTKVAEQANSEPLST 1798

Query: 263  QVWGSSS----------VGDQTENEIQWSQHKE---PPVKPFAWGTNK 159
              WGSSS           GD T+NE  WS  ++          WG++K
Sbjct: 1799 --WGSSSDWVKPDSQTPTGDNTKNESPWSSSQKLLNDSTDSQGWGSSK 1844



 Score = 24.6 bits (52), Expect(2) = 5e-07
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 160  RKSSCGWGSSNTGDWKNK 107
            R+ S G G +N  DWKNK
Sbjct: 1877 REGSQGRGPTNDRDWKNK 1894


>ref|XP_012836427.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
            [Erythranthe guttatus]
          Length = 2102

 Score = 57.8 bits (138), Expect(2) = 5e-07
 Identities = 72/288 (25%), Positives = 107/288 (37%), Gaps = 23/288 (7%)
 Frame = -3

Query: 953  GGWNTND---SWGGQAKANSTGGWNTKKQPSQDDPNDSWGGQVEKANTTGG-WNTKT*PS 786
            G W   D   +WG   KA S GG   KK     D   +WG  V+KA + GG W  K   S
Sbjct: 1573 GDWAKKDEPSTWGNAKKAGSDGGDWAKK-----DEQSTWGN-VKKAGSDGGDWAKKDEQS 1626

Query: 785  ---QAEPRDSCGGLVEKTNTTGGWNTETQSSQDEPPW*SRQKKPTQLLVGIPRRSHPRLN 615
                 +   S GG   K +    W    ++  D   W    KK  Q   G  + S  +  
Sbjct: 1627 TWGNVKKAGSDGGDWAKKDEQSTWGNVKKAGSDGGDW---AKKDEQSTWGNVKASQIQ-- 1681

Query: 614  LMILGEDLWKNQHNWWLEY---EDAVIPG*SS*FLGRIC*KNQHNWWLECPKAATDDPSD 444
                      N+  W  +    E+   P      L     K + + W     + T + S 
Sbjct: 1682 ----------NKSTWGRDAAPTENVSSPKSQEDGLWSSAQKGEQSTWGHVKTSQTQNKS- 1730

Query: 443  SWGGHVEKANATG*NGKERNGLWNQWSEPPKNETVTTNNKSAGTWGTIMAGEHVNQPVDS 264
            +WGG             + +GLW+  S   K +  + +N     W T +A +  ++P+ +
Sbjct: 1731 TWGGDTAPIENVPSPKSQEDGLWSSASAAQKEQDGSKDNNP---WQTKVAEQANSEPLST 1787

Query: 263  QVWGSSS----------VGDQTENEIQWSQHKE---PPVKPFAWGTNK 159
              WGSSS           GD T+NE  WS  ++          WG++K
Sbjct: 1788 --WGSSSDWVKPDSQTPTGDNTKNESPWSSSQKLLNDSTDSQGWGSSK 1833



 Score = 24.6 bits (52), Expect(2) = 5e-07
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 160  RKSSCGWGSSNTGDWKNK 107
            R+ S G G +N  DWKNK
Sbjct: 1866 REGSQGRGPTNDRDWKNK 1883


>ref|XP_001449252.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
           gi|73807137|emb|CAI44473.1| RNA-binding protein involved
           in epigenetic programming of developmental genome
           rearrangements [Paramecium tetraurelia]
           gi|124416829|emb|CAK81855.1| unnamed protein product
           [Paramecium tetraurelia]
          Length = 1109

 Score = 48.5 bits (114), Expect(3) = 2e-06
 Identities = 32/125 (25%), Positives = 47/125 (37%), Gaps = 21/125 (16%)
 Frame = -3

Query: 968 NSSAPGGWNTNDSWGG---------------QAKANSTGGWNTKKQPSQDDPNDSWGGQV 834
           N  + GG + N++ GG               + K NS GGW +     Q   +  WG   
Sbjct: 203 NGGSWGGNSNNNNGGGNTWGSNGDSNQWGNSENKDNSGGGWGSTSTNEQPAQSGGWGSTT 262

Query: 833 EKANTTGGWNTKT*PSQAEPRDSCGGLVEK-----TNTTGGWNTET-QSSQDEPPW*SRQ 672
           E+   +GGW   T     +  +  G   E+       T GGW + T Q  Q    W    
Sbjct: 263 EQPAQSGGWGNSTQQPAQQASEGWGSKTEQQPQQAEQTQGGWGSTTEQPKQSNSAWGQAT 322

Query: 671 KKPTQ 657
           ++P Q
Sbjct: 323 EQPVQ 327



 Score = 28.5 bits (62), Expect(3) = 2e-06
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 520 WGGFAEKTNTTGGWNAQKQP 461
           WG   E+  T+GGW +  QP
Sbjct: 391 WGSTTEQATTSGGWGSSDQP 410



 Score = 22.7 bits (47), Expect(3) = 2e-06
 Identities = 10/27 (37%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
 Frame = -2

Query: 651 GWNTKTQPS*AEPDDSWGG-LVEKPTQ 574
           GW   TQ   A+    WG    E+P Q
Sbjct: 331 GWGNSTQEQPAQQSGGWGSTTTEQPPQ 357


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