BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00005037
         (1135 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010249518.1| PREDICTED: probable RNA-dependent RNA polyme...   380   e-105
ref|XP_010249519.1| PREDICTED: probable RNA-dependent RNA polyme...   380   e-105
ref|XP_010656269.1| PREDICTED: probable RNA-dependent RNA polyme...   360   1e-96
ref|XP_010656270.1| PREDICTED: probable RNA-dependent RNA polyme...   360   1e-96
ref|XP_009385774.1| PREDICTED: probable RNA-dependent RNA polyme...   358   5e-96
ref|XP_009385773.1| PREDICTED: probable RNA-dependent RNA polyme...   358   5e-96
ref|XP_009385772.1| PREDICTED: probable RNA-dependent RNA polyme...   358   5e-96
ref|XP_009385771.1| PREDICTED: probable RNA-dependent RNA polyme...   358   5e-96
ref|XP_010049630.1| PREDICTED: probable RNA-dependent RNA polyme...   337   8e-90
ref|XP_010049629.1| PREDICTED: probable RNA-dependent RNA polyme...   337   8e-90
ref|XP_010049628.1| PREDICTED: probable RNA-dependent RNA polyme...   337   8e-90
ref|XP_010049627.1| PREDICTED: probable RNA-dependent RNA polyme...   337   8e-90
ref|XP_008791538.1| PREDICTED: probable RNA-dependent RNA polyme...   336   2e-89
ref|XP_008791530.1| PREDICTED: probable RNA-dependent RNA polyme...   336   2e-89
ref|XP_008791522.1| PREDICTED: probable RNA-dependent RNA polyme...   336   2e-89
ref|XP_009760372.1| PREDICTED: probable RNA-dependent RNA polyme...   336   2e-89
ref|XP_009760371.1| PREDICTED: probable RNA-dependent RNA polyme...   336   2e-89
ref|XP_009760370.1| PREDICTED: probable RNA-dependent RNA polyme...   336   2e-89
ref|XP_010095361.1| putative RNA-dependent RNA polymerase 3 [Mor...   334   7e-89
ref|XP_009780070.1| PREDICTED: probable RNA-dependent RNA polyme...   334   9e-89

>ref|XP_010249518.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Nelumbo nucifera]
          Length = 1045

 Score =  380 bits (976), Expect(2) = e-105
 Identities = 182/309 (58%), Positives = 233/309 (75%)
 Frame = -1

Query: 1135 MKATYVEELVNFVGNAKYAIFFPTKGPRSVADEIANSDFDGDMYWVSRNPQLLESFNPSS 956
            + ATYV+EL + VGNAKYAIFFP KGPRS+ADE+ANSDFDGD+YWVSRNPQLL+ F PS 
Sbjct: 714  LTATYVKELESIVGNAKYAIFFPIKGPRSLADEMANSDFDGDLYWVSRNPQLLDYFRPSK 773

Query: 955  PWEQKYTSKNVRHRKPTDFSSGELEDELFQQFLTTRFNPSYSMGVAADCWLAYMDRLLTL 776
            PW+Q Y+ K   HRKP DFS+ ELE++LF  FLTT+F PS ++G+AAD WLA+MDRLLTL
Sbjct: 774  PWKQTYSKKAPCHRKPIDFSAEELENQLFHLFLTTKFEPSKALGIAADSWLAFMDRLLTL 833

Query: 775  SDDCTEEKKCMKDKMLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHYLEKSNLGSYQS 596
             D+C+ EK+C+K KMLQL D YYDALDAPK G KVEVP  L+  ++PH++E+ N   Y S
Sbjct: 834  GDECSSEKECLKKKMLQLVDTYYDALDAPKNGIKVEVPKCLQAEKFPHFMERMN--KYNS 891

Query: 595  RSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYDQYRSEMTDALN 416
             S+LGLI+D+V SF+    L + E  KL  FDG E+  +CM  W+  Y++YR EM  A+ 
Sbjct: 892  TSVLGLIYDEVNSFQKA-NLSSTEVWKLFCFDG-EVAEACMEKWQMHYNEYRDEMKSAME 949

Query: 415  QDDDVKDDYAEEVNQKYKQMLYDAPELNESTRIREEIYNEALAIYNIVYDYARIKGVGRC 236
             D + K+  A EV QKYKQ+LY A    +S+R R+EI+ ++LAIY++ YDYAR KGV +C
Sbjct: 950  LDGEAKNASANEVIQKYKQLLYGAANFEQSSRTRQEIFEDSLAIYHVCYDYARTKGVEKC 1009

Query: 235  GFAWKVAGQ 209
             FAWKVAG+
Sbjct: 1010 SFAWKVAGE 1018



 Score = 31.6 bits (70), Expect(2) = e-105
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = -2

Query: 222  KLLVRALCEFYAKKLDEDPIICTKSVLREL 133
            K+   ALC  Y  K D   IIC++S+LREL
Sbjct: 1014 KVAGEALCMLYTIKQDGGSIICSQSILREL 1043


>ref|XP_010249519.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
            [Nelumbo nucifera]
          Length = 1022

 Score =  380 bits (976), Expect(2) = e-105
 Identities = 182/309 (58%), Positives = 233/309 (75%)
 Frame = -1

Query: 1135 MKATYVEELVNFVGNAKYAIFFPTKGPRSVADEIANSDFDGDMYWVSRNPQLLESFNPSS 956
            + ATYV+EL + VGNAKYAIFFP KGPRS+ADE+ANSDFDGD+YWVSRNPQLL+ F PS 
Sbjct: 691  LTATYVKELESIVGNAKYAIFFPIKGPRSLADEMANSDFDGDLYWVSRNPQLLDYFRPSK 750

Query: 955  PWEQKYTSKNVRHRKPTDFSSGELEDELFQQFLTTRFNPSYSMGVAADCWLAYMDRLLTL 776
            PW+Q Y+ K   HRKP DFS+ ELE++LF  FLTT+F PS ++G+AAD WLA+MDRLLTL
Sbjct: 751  PWKQTYSKKAPCHRKPIDFSAEELENQLFHLFLTTKFEPSKALGIAADSWLAFMDRLLTL 810

Query: 775  SDDCTEEKKCMKDKMLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHYLEKSNLGSYQS 596
             D+C+ EK+C+K KMLQL D YYDALDAPK G KVEVP  L+  ++PH++E+ N   Y S
Sbjct: 811  GDECSSEKECLKKKMLQLVDTYYDALDAPKNGIKVEVPKCLQAEKFPHFMERMN--KYNS 868

Query: 595  RSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYDQYRSEMTDALN 416
             S+LGLI+D+V SF+    L + E  KL  FDG E+  +CM  W+  Y++YR EM  A+ 
Sbjct: 869  TSVLGLIYDEVNSFQKA-NLSSTEVWKLFCFDG-EVAEACMEKWQMHYNEYRDEMKSAME 926

Query: 415  QDDDVKDDYAEEVNQKYKQMLYDAPELNESTRIREEIYNEALAIYNIVYDYARIKGVGRC 236
             D + K+  A EV QKYKQ+LY A    +S+R R+EI+ ++LAIY++ YDYAR KGV +C
Sbjct: 927  LDGEAKNASANEVIQKYKQLLYGAANFEQSSRTRQEIFEDSLAIYHVCYDYARTKGVEKC 986

Query: 235  GFAWKVAGQ 209
             FAWKVAG+
Sbjct: 987  SFAWKVAGE 995



 Score = 31.6 bits (70), Expect(2) = e-105
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = -2

Query: 222  KLLVRALCEFYAKKLDEDPIICTKSVLREL 133
            K+   ALC  Y  K D   IIC++S+LREL
Sbjct: 991  KVAGEALCMLYTIKQDGGSIICSQSILREL 1020


>ref|XP_010656269.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1 [Vitis
            vinifera]
          Length = 954

 Score =  360 bits (924), Expect = 1e-96
 Identities = 179/320 (55%), Positives = 232/320 (72%), Gaps = 2/320 (0%)
 Frame = -1

Query: 1135 MKATYVEELVNFVGNAKYAIFFPTKGPRSVADEIANSDFDGDMYWVSRNPQLLESFNPSS 956
            + ATYVE L  FVGNAKYAIFFP KGPRS+ADE+ANSDFDGDMYWVSRN QLL+ F  S 
Sbjct: 621  LNATYVEALEEFVGNAKYAIFFPIKGPRSLADEMANSDFDGDMYWVSRNQQLLQYFRASE 680

Query: 955  PWEQKYTSKNVRHRKPTDFSSGELEDELFQQFLTTRFNPSYSMGVAADCWLAYMDRLLTL 776
            PW +K ++++V  ++PTDFS  ELE ELFQ FLTTRF  S ++G+AAD WL +MDRLLTL
Sbjct: 681  PWMRKRSTRHVPSKRPTDFSPDELEHELFQLFLTTRFQTSSAIGMAADNWLVFMDRLLTL 740

Query: 775  SDDCTEEKKCMKDKMLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHYLEKSNLGSYQS 596
             DDC++EK+C+K KML+LTDIYYDALDAPK+G KV V   L+  ++PH++ + +  SY S
Sbjct: 741  RDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELKAEKFPHFMGRES--SYHS 798

Query: 595  RSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYDQYRSEMTDALN 416
             SILG I+D V SF+  +     E  +LP F+ + +P +C+R W++RYDQYRSEM  AL 
Sbjct: 799  TSILGQIYDAVESFQ-PENQSTKEIWRLPLFNIDAVPQACLRSWKDRYDQYRSEMAAALQ 857

Query: 415  QDDDVKDDYAEEVNQKYKQMLYDAPELNESTRIREEIYNEALAIYNIVYDYARIKG--VG 242
               + KD+YA EV  KYKQ+LY A E  ES R  E+I++EALAIY++ Y++  I G  V 
Sbjct: 858  HGGETKDEYAAEVINKYKQILYGAAEFEESPRNLEDIFDEALAIYHVTYEFV-INGARVS 916

Query: 241  RCGFAWKVAGQGALRILCQK 182
             C F W+VAG+   ++   K
Sbjct: 917  YCNFPWRVAGRALCKLYTVK 936


>ref|XP_010656270.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2 [Vitis
            vinifera] gi|297738765|emb|CBI28010.3| unnamed protein
            product [Vitis vinifera]
          Length = 929

 Score =  360 bits (924), Expect = 1e-96
 Identities = 179/320 (55%), Positives = 232/320 (72%), Gaps = 2/320 (0%)
 Frame = -1

Query: 1135 MKATYVEELVNFVGNAKYAIFFPTKGPRSVADEIANSDFDGDMYWVSRNPQLLESFNPSS 956
            + ATYVE L  FVGNAKYAIFFP KGPRS+ADE+ANSDFDGDMYWVSRN QLL+ F  S 
Sbjct: 596  LNATYVEALEEFVGNAKYAIFFPIKGPRSLADEMANSDFDGDMYWVSRNQQLLQYFRASE 655

Query: 955  PWEQKYTSKNVRHRKPTDFSSGELEDELFQQFLTTRFNPSYSMGVAADCWLAYMDRLLTL 776
            PW +K ++++V  ++PTDFS  ELE ELFQ FLTTRF  S ++G+AAD WL +MDRLLTL
Sbjct: 656  PWMRKRSTRHVPSKRPTDFSPDELEHELFQLFLTTRFQTSSAIGMAADNWLVFMDRLLTL 715

Query: 775  SDDCTEEKKCMKDKMLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHYLEKSNLGSYQS 596
             DDC++EK+C+K KML+LTDIYYDALDAPK+G KV V   L+  ++PH++ + +  SY S
Sbjct: 716  RDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELKAEKFPHFMGRES--SYHS 773

Query: 595  RSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYDQYRSEMTDALN 416
             SILG I+D V SF+  +     E  +LP F+ + +P +C+R W++RYDQYRSEM  AL 
Sbjct: 774  TSILGQIYDAVESFQ-PENQSTKEIWRLPLFNIDAVPQACLRSWKDRYDQYRSEMAAALQ 832

Query: 415  QDDDVKDDYAEEVNQKYKQMLYDAPELNESTRIREEIYNEALAIYNIVYDYARIKG--VG 242
               + KD+YA EV  KYKQ+LY A E  ES R  E+I++EALAIY++ Y++  I G  V 
Sbjct: 833  HGGETKDEYAAEVINKYKQILYGAAEFEESPRNLEDIFDEALAIYHVTYEFV-INGARVS 891

Query: 241  RCGFAWKVAGQGALRILCQK 182
             C F W+VAG+   ++   K
Sbjct: 892  YCNFPWRVAGRALCKLYTVK 911


>ref|XP_009385774.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X4 [Musa
            acuminata subsp. malaccensis]
          Length = 802

 Score =  358 bits (919), Expect = 5e-96
 Identities = 186/321 (57%), Positives = 235/321 (73%), Gaps = 5/321 (1%)
 Frame = -1

Query: 1135 MKATYVEELVNFVGNAKYAIFFPTKGPRSVADEIANSDFDGDMYWVSRNPQLLESFNPSS 956
            + ATY ++L  FVG +KYAIFFPTKGPRS+ADE+ANSDFDGDMYWVSRN QLL+ F  S 
Sbjct: 465  LTATYNKDLEKFVGYSKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNSQLLQYFRSSM 524

Query: 955  PWEQKYTS-KNVRHRKPTDFSSGELEDELFQQFLTTRFNPSYSMGVAADCWLAYMDRLLT 779
            PW    ++ + ++ +KP +FSS ELE ELFQQFL  RF PS ++ +A+DCWL+YMDRLLT
Sbjct: 525  PWTPTPSNMRGIQQKKPIEFSSKELERELFQQFLINRFKPSNTVSMASDCWLSYMDRLLT 584

Query: 778  LSDDCTEEKKCMKDKMLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHYLEKSNLGSYQ 599
            L D+C EEK+C+K+K+LQL +IYYDALDAPK+G KVEVP  L+  +YPHY+E+SN  SY 
Sbjct: 585  LGDECAEEKECLKEKILQLVNIYYDALDAPKSGVKVEVPIELKAEKYPHYMERSN--SYT 642

Query: 598  SRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYDQYRSEMTDAL 419
            S SILGLIFDKV+S + T+   +N   KLP F  EE   SC+ LW +RY  Y  EM   +
Sbjct: 643  SMSILGLIFDKVSSVQ-TEDPPSNGISKLPCFT-EEPSQSCLLLWSQRYSNYLKEMKQVM 700

Query: 418  ---NQDDDVKDDYAEEVNQKYKQMLYDAPELNESTRIREEIYNEALAIYNIVYDYA-RIK 251
               ++  D K++ A+E+ QKYK +LY A E +ES R  E+I++EALAIYN  YDYA R +
Sbjct: 701  EMKHETKDSKNEMADEIIQKYKLLLYGAAEFDESPRKLEDIWDEALAIYNNAYDYAERCQ 760

Query: 250  GVGRCGFAWKVAGQGALRILC 188
             VGRC FAWKVAG    R LC
Sbjct: 761  AVGRCSFAWKVAG----RALC 777


>ref|XP_009385773.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X3 [Musa
            acuminata subsp. malaccensis]
          Length = 947

 Score =  358 bits (919), Expect = 5e-96
 Identities = 186/321 (57%), Positives = 235/321 (73%), Gaps = 5/321 (1%)
 Frame = -1

Query: 1135 MKATYVEELVNFVGNAKYAIFFPTKGPRSVADEIANSDFDGDMYWVSRNPQLLESFNPSS 956
            + ATY ++L  FVG +KYAIFFPTKGPRS+ADE+ANSDFDGDMYWVSRN QLL+ F  S 
Sbjct: 610  LTATYNKDLEKFVGYSKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNSQLLQYFRSSM 669

Query: 955  PWEQKYTS-KNVRHRKPTDFSSGELEDELFQQFLTTRFNPSYSMGVAADCWLAYMDRLLT 779
            PW    ++ + ++ +KP +FSS ELE ELFQQFL  RF PS ++ +A+DCWL+YMDRLLT
Sbjct: 670  PWTPTPSNMRGIQQKKPIEFSSKELERELFQQFLINRFKPSNTVSMASDCWLSYMDRLLT 729

Query: 778  LSDDCTEEKKCMKDKMLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHYLEKSNLGSYQ 599
            L D+C EEK+C+K+K+LQL +IYYDALDAPK+G KVEVP  L+  +YPHY+E+SN  SY 
Sbjct: 730  LGDECAEEKECLKEKILQLVNIYYDALDAPKSGVKVEVPIELKAEKYPHYMERSN--SYT 787

Query: 598  SRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYDQYRSEMTDAL 419
            S SILGLIFDKV+S + T+   +N   KLP F  EE   SC+ LW +RY  Y  EM   +
Sbjct: 788  SMSILGLIFDKVSSVQ-TEDPPSNGISKLPCFT-EEPSQSCLLLWSQRYSNYLKEMKQVM 845

Query: 418  ---NQDDDVKDDYAEEVNQKYKQMLYDAPELNESTRIREEIYNEALAIYNIVYDYA-RIK 251
               ++  D K++ A+E+ QKYK +LY A E +ES R  E+I++EALAIYN  YDYA R +
Sbjct: 846  EMKHETKDSKNEMADEIIQKYKLLLYGAAEFDESPRKLEDIWDEALAIYNNAYDYAERCQ 905

Query: 250  GVGRCGFAWKVAGQGALRILC 188
             VGRC FAWKVAG    R LC
Sbjct: 906  AVGRCSFAWKVAG----RALC 922


>ref|XP_009385772.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2 [Musa
            acuminata subsp. malaccensis]
          Length = 995

 Score =  358 bits (919), Expect = 5e-96
 Identities = 186/321 (57%), Positives = 235/321 (73%), Gaps = 5/321 (1%)
 Frame = -1

Query: 1135 MKATYVEELVNFVGNAKYAIFFPTKGPRSVADEIANSDFDGDMYWVSRNPQLLESFNPSS 956
            + ATY ++L  FVG +KYAIFFPTKGPRS+ADE+ANSDFDGDMYWVSRN QLL+ F  S 
Sbjct: 658  LTATYNKDLEKFVGYSKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNSQLLQYFRSSM 717

Query: 955  PWEQKYTS-KNVRHRKPTDFSSGELEDELFQQFLTTRFNPSYSMGVAADCWLAYMDRLLT 779
            PW    ++ + ++ +KP +FSS ELE ELFQQFL  RF PS ++ +A+DCWL+YMDRLLT
Sbjct: 718  PWTPTPSNMRGIQQKKPIEFSSKELERELFQQFLINRFKPSNTVSMASDCWLSYMDRLLT 777

Query: 778  LSDDCTEEKKCMKDKMLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHYLEKSNLGSYQ 599
            L D+C EEK+C+K+K+LQL +IYYDALDAPK+G KVEVP  L+  +YPHY+E+SN  SY 
Sbjct: 778  LGDECAEEKECLKEKILQLVNIYYDALDAPKSGVKVEVPIELKAEKYPHYMERSN--SYT 835

Query: 598  SRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYDQYRSEMTDAL 419
            S SILGLIFDKV+S + T+   +N   KLP F  EE   SC+ LW +RY  Y  EM   +
Sbjct: 836  SMSILGLIFDKVSSVQ-TEDPPSNGISKLPCFT-EEPSQSCLLLWSQRYSNYLKEMKQVM 893

Query: 418  ---NQDDDVKDDYAEEVNQKYKQMLYDAPELNESTRIREEIYNEALAIYNIVYDYA-RIK 251
               ++  D K++ A+E+ QKYK +LY A E +ES R  E+I++EALAIYN  YDYA R +
Sbjct: 894  EMKHETKDSKNEMADEIIQKYKLLLYGAAEFDESPRKLEDIWDEALAIYNNAYDYAERCQ 953

Query: 250  GVGRCGFAWKVAGQGALRILC 188
             VGRC FAWKVAG    R LC
Sbjct: 954  AVGRCSFAWKVAG----RALC 970


>ref|XP_009385771.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1 [Musa
            acuminata subsp. malaccensis]
          Length = 996

 Score =  358 bits (919), Expect = 5e-96
 Identities = 186/321 (57%), Positives = 235/321 (73%), Gaps = 5/321 (1%)
 Frame = -1

Query: 1135 MKATYVEELVNFVGNAKYAIFFPTKGPRSVADEIANSDFDGDMYWVSRNPQLLESFNPSS 956
            + ATY ++L  FVG +KYAIFFPTKGPRS+ADE+ANSDFDGDMYWVSRN QLL+ F  S 
Sbjct: 659  LTATYNKDLEKFVGYSKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNSQLLQYFRSSM 718

Query: 955  PWEQKYTS-KNVRHRKPTDFSSGELEDELFQQFLTTRFNPSYSMGVAADCWLAYMDRLLT 779
            PW    ++ + ++ +KP +FSS ELE ELFQQFL  RF PS ++ +A+DCWL+YMDRLLT
Sbjct: 719  PWTPTPSNMRGIQQKKPIEFSSKELERELFQQFLINRFKPSNTVSMASDCWLSYMDRLLT 778

Query: 778  LSDDCTEEKKCMKDKMLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHYLEKSNLGSYQ 599
            L D+C EEK+C+K+K+LQL +IYYDALDAPK+G KVEVP  L+  +YPHY+E+SN  SY 
Sbjct: 779  LGDECAEEKECLKEKILQLVNIYYDALDAPKSGVKVEVPIELKAEKYPHYMERSN--SYT 836

Query: 598  SRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYDQYRSEMTDAL 419
            S SILGLIFDKV+S + T+   +N   KLP F  EE   SC+ LW +RY  Y  EM   +
Sbjct: 837  SMSILGLIFDKVSSVQ-TEDPPSNGISKLPCFT-EEPSQSCLLLWSQRYSNYLKEMKQVM 894

Query: 418  ---NQDDDVKDDYAEEVNQKYKQMLYDAPELNESTRIREEIYNEALAIYNIVYDYA-RIK 251
               ++  D K++ A+E+ QKYK +LY A E +ES R  E+I++EALAIYN  YDYA R +
Sbjct: 895  EMKHETKDSKNEMADEIIQKYKLLLYGAAEFDESPRKLEDIWDEALAIYNNAYDYAERCQ 954

Query: 250  GVGRCGFAWKVAGQGALRILC 188
             VGRC FAWKVAG    R LC
Sbjct: 955  AVGRCSFAWKVAG----RALC 971


>ref|XP_010049630.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X4
            [Eucalyptus grandis]
          Length = 904

 Score =  337 bits (865), Expect = 8e-90
 Identities = 177/320 (55%), Positives = 214/320 (66%), Gaps = 2/320 (0%)
 Frame = -1

Query: 1135 MKATYVEELVNFVGNAKYAIFFPTKGPRSVADEIANSDFDGDMYWVSRNPQLLESFNPSS 956
            + ATYVE L   VGN+KYAIFFPT GPRS+ADEIA  DFDGDMYWVSRNPQLL+ F PS 
Sbjct: 569  LNATYVEALETKVGNSKYAIFFPTSGPRSLADEIAGGDFDGDMYWVSRNPQLLKYFTPSQ 628

Query: 955  PWEQKYTSKNVRHRKPTDFSSGELEDELFQQFLTTRFNPSYSMGVAADCWLAYMDRLLTL 776
            PW     ++++  +KP D S  ELEDEL   +L TRFNPSY++GVAAD W A MDR LTL
Sbjct: 629  PWVSASAAQDMNCKKPIDLSFEELEDELIDLWLNTRFNPSYTVGVAADSWQALMDRFLTL 688

Query: 775  SDDCTEEKKCMKDKMLQLTDIYYDALDAPK-TGEKVEVPSNLRVSRYPHYLEKSNLGSYQ 599
              D  +EK  ++  + QL DIYYDA+DAPK +G K+EVP +L+   +PHY+ K    S+ 
Sbjct: 689  GSDQVDEKHRVERNLCQLIDIYYDAIDAPKNSGLKIEVPKSLKAETFPHYMGKDKSMSFH 748

Query: 598  SRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYDQYRSEMTDAL 419
            S SILG+IFDKV S++           KLP FD  E P  C   WE RY +YRSEM  AL
Sbjct: 749  SNSILGVIFDKVESYQ-ADIPTGKGIWKLPYFD-VETPRDCRMEWERRYTEYRSEMVAAL 806

Query: 418  NQDDDVKDDYAEEVNQKYKQMLYDAPELNESTRIREEIYNEALAIYNIVYDYA-RIKGVG 242
             +  + K+  A+ V  KYKQ+LY APE  ES R  E+I+NEALAIYNI YDYA R   V 
Sbjct: 807  GEGAEGKNSSADNVINKYKQLLYGAPEFEESLRKEEDIFNEALAIYNITYDYAMRWNDVS 866

Query: 241  RCGFAWKVAGQGALRILCQK 182
            +CGFAW+VAG    RI   K
Sbjct: 867  KCGFAWRVAGPALCRIYAIK 886


>ref|XP_010049629.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X3
            [Eucalyptus grandis]
          Length = 980

 Score =  337 bits (865), Expect = 8e-90
 Identities = 177/320 (55%), Positives = 214/320 (66%), Gaps = 2/320 (0%)
 Frame = -1

Query: 1135 MKATYVEELVNFVGNAKYAIFFPTKGPRSVADEIANSDFDGDMYWVSRNPQLLESFNPSS 956
            + ATYVE L   VGN+KYAIFFPT GPRS+ADEIA  DFDGDMYWVSRNPQLL+ F PS 
Sbjct: 645  LNATYVEALETKVGNSKYAIFFPTSGPRSLADEIAGGDFDGDMYWVSRNPQLLKYFTPSQ 704

Query: 955  PWEQKYTSKNVRHRKPTDFSSGELEDELFQQFLTTRFNPSYSMGVAADCWLAYMDRLLTL 776
            PW     ++++  +KP D S  ELEDEL   +L TRFNPSY++GVAAD W A MDR LTL
Sbjct: 705  PWVSASAAQDMNCKKPIDLSFEELEDELIDLWLNTRFNPSYTVGVAADSWQALMDRFLTL 764

Query: 775  SDDCTEEKKCMKDKMLQLTDIYYDALDAPK-TGEKVEVPSNLRVSRYPHYLEKSNLGSYQ 599
              D  +EK  ++  + QL DIYYDA+DAPK +G K+EVP +L+   +PHY+ K    S+ 
Sbjct: 765  GSDQVDEKHRVERNLCQLIDIYYDAIDAPKNSGLKIEVPKSLKAETFPHYMGKDKSMSFH 824

Query: 598  SRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYDQYRSEMTDAL 419
            S SILG+IFDKV S++           KLP FD  E P  C   WE RY +YRSEM  AL
Sbjct: 825  SNSILGVIFDKVESYQ-ADIPTGKGIWKLPYFD-VETPRDCRMEWERRYTEYRSEMVAAL 882

Query: 418  NQDDDVKDDYAEEVNQKYKQMLYDAPELNESTRIREEIYNEALAIYNIVYDYA-RIKGVG 242
             +  + K+  A+ V  KYKQ+LY APE  ES R  E+I+NEALAIYNI YDYA R   V 
Sbjct: 883  GEGAEGKNSSADNVINKYKQLLYGAPEFEESLRKEEDIFNEALAIYNITYDYAMRWNDVS 942

Query: 241  RCGFAWKVAGQGALRILCQK 182
            +CGFAW+VAG    RI   K
Sbjct: 943  KCGFAWRVAGPALCRIYAIK 962


>ref|XP_010049628.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
            [Eucalyptus grandis]
          Length = 992

 Score =  337 bits (865), Expect = 8e-90
 Identities = 177/320 (55%), Positives = 214/320 (66%), Gaps = 2/320 (0%)
 Frame = -1

Query: 1135 MKATYVEELVNFVGNAKYAIFFPTKGPRSVADEIANSDFDGDMYWVSRNPQLLESFNPSS 956
            + ATYVE L   VGN+KYAIFFPT GPRS+ADEIA  DFDGDMYWVSRNPQLL+ F PS 
Sbjct: 657  LNATYVEALETKVGNSKYAIFFPTSGPRSLADEIAGGDFDGDMYWVSRNPQLLKYFTPSQ 716

Query: 955  PWEQKYTSKNVRHRKPTDFSSGELEDELFQQFLTTRFNPSYSMGVAADCWLAYMDRLLTL 776
            PW     ++++  +KP D S  ELEDEL   +L TRFNPSY++GVAAD W A MDR LTL
Sbjct: 717  PWVSASAAQDMNCKKPIDLSFEELEDELIDLWLNTRFNPSYTVGVAADSWQALMDRFLTL 776

Query: 775  SDDCTEEKKCMKDKMLQLTDIYYDALDAPK-TGEKVEVPSNLRVSRYPHYLEKSNLGSYQ 599
              D  +EK  ++  + QL DIYYDA+DAPK +G K+EVP +L+   +PHY+ K    S+ 
Sbjct: 777  GSDQVDEKHRVERNLCQLIDIYYDAIDAPKNSGLKIEVPKSLKAETFPHYMGKDKSMSFH 836

Query: 598  SRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYDQYRSEMTDAL 419
            S SILG+IFDKV S++           KLP FD  E P  C   WE RY +YRSEM  AL
Sbjct: 837  SNSILGVIFDKVESYQ-ADIPTGKGIWKLPYFD-VETPRDCRMEWERRYTEYRSEMVAAL 894

Query: 418  NQDDDVKDDYAEEVNQKYKQMLYDAPELNESTRIREEIYNEALAIYNIVYDYA-RIKGVG 242
             +  + K+  A+ V  KYKQ+LY APE  ES R  E+I+NEALAIYNI YDYA R   V 
Sbjct: 895  GEGAEGKNSSADNVINKYKQLLYGAPEFEESLRKEEDIFNEALAIYNITYDYAMRWNDVS 954

Query: 241  RCGFAWKVAGQGALRILCQK 182
            +CGFAW+VAG    RI   K
Sbjct: 955  KCGFAWRVAGPALCRIYAIK 974


>ref|XP_010049627.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
            [Eucalyptus grandis]
          Length = 993

 Score =  337 bits (865), Expect = 8e-90
 Identities = 177/320 (55%), Positives = 214/320 (66%), Gaps = 2/320 (0%)
 Frame = -1

Query: 1135 MKATYVEELVNFVGNAKYAIFFPTKGPRSVADEIANSDFDGDMYWVSRNPQLLESFNPSS 956
            + ATYVE L   VGN+KYAIFFPT GPRS+ADEIA  DFDGDMYWVSRNPQLL+ F PS 
Sbjct: 658  LNATYVEALETKVGNSKYAIFFPTSGPRSLADEIAGGDFDGDMYWVSRNPQLLKYFTPSQ 717

Query: 955  PWEQKYTSKNVRHRKPTDFSSGELEDELFQQFLTTRFNPSYSMGVAADCWLAYMDRLLTL 776
            PW     ++++  +KP D S  ELEDEL   +L TRFNPSY++GVAAD W A MDR LTL
Sbjct: 718  PWVSASAAQDMNCKKPIDLSFEELEDELIDLWLNTRFNPSYTVGVAADSWQALMDRFLTL 777

Query: 775  SDDCTEEKKCMKDKMLQLTDIYYDALDAPK-TGEKVEVPSNLRVSRYPHYLEKSNLGSYQ 599
              D  +EK  ++  + QL DIYYDA+DAPK +G K+EVP +L+   +PHY+ K    S+ 
Sbjct: 778  GSDQVDEKHRVERNLCQLIDIYYDAIDAPKNSGLKIEVPKSLKAETFPHYMGKDKSMSFH 837

Query: 598  SRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYDQYRSEMTDAL 419
            S SILG+IFDKV S++           KLP FD  E P  C   WE RY +YRSEM  AL
Sbjct: 838  SNSILGVIFDKVESYQ-ADIPTGKGIWKLPYFD-VETPRDCRMEWERRYTEYRSEMVAAL 895

Query: 418  NQDDDVKDDYAEEVNQKYKQMLYDAPELNESTRIREEIYNEALAIYNIVYDYA-RIKGVG 242
             +  + K+  A+ V  KYKQ+LY APE  ES R  E+I+NEALAIYNI YDYA R   V 
Sbjct: 896  GEGAEGKNSSADNVINKYKQLLYGAPEFEESLRKEEDIFNEALAIYNITYDYAMRWNDVS 955

Query: 241  RCGFAWKVAGQGALRILCQK 182
            +CGFAW+VAG    RI   K
Sbjct: 956  KCGFAWRVAGPALCRIYAIK 975


>ref|XP_008791538.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X3
            [Phoenix dactylifera]
          Length = 957

 Score =  336 bits (862), Expect = 2e-89
 Identities = 169/325 (52%), Positives = 229/325 (70%), Gaps = 7/325 (2%)
 Frame = -1

Query: 1135 MKATYVEELVNFVGNAKYAIFFPTKGPRSVADEIANSDFDGDMYWVSRNPQLLESFNPSS 956
            + ATYV++L   VGN+KYAI F TKGPRS+ADE+A  DFDGDMYWVSRNPQLL+ F  S 
Sbjct: 616  LTATYVKDLDKIVGNSKYAILFSTKGPRSLADEMAGGDFDGDMYWVSRNPQLLKYFKASK 675

Query: 955  PWEQKYTSKNVRHRKPTDFSSGELEDELFQQFLTTRFNPSYSMGVAADCWLAYMDRLLTL 776
            PW +      V   KPT FS+ ELE ELF+QFL  RF PSY++G A+DCWL YMDRLLTL
Sbjct: 676  PWVRTAPRIKVTQLKPTQFSNTELERELFEQFLINRFKPSYTIGTASDCWLMYMDRLLTL 735

Query: 775  SDDCTEEKKCMKDKMLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHYLEKSNLG---S 605
             D+C ++K+ +++KML+L DIYYDALDA K+G K+EVPS L+  ++P+++EK  L     
Sbjct: 736  GDECAKQKQLLREKMLELVDIYYDALDASKSGLKIEVPSELKPDQFPNFMEKKYLDKDKE 795

Query: 604  YQSRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYDQYRSEMTD 425
            Y+S+SI GLI++KV     T+ L +NE  +LP F+  EIP SC++ W+E Y +Y +EM+ 
Sbjct: 796  YESKSIFGLIYEKV-KLSQTKDLSSNEIWQLPCFN-LEIPPSCLKSWKEHYTEYLAEMSQ 853

Query: 424  AL---NQDDDVKDDYAEEVNQKYKQMLYDAPELNESTRIREEIYNEALAIYNIVYDYAR- 257
             +   ++  + KD  A +V QKYK MLY A E  ES R  ++I+NEALAIY++ Y+YA+ 
Sbjct: 854  VMSMEHESKESKDWMANKVIQKYKLMLYGASEFEESNRELDDIFNEALAIYHVTYEYAKS 913

Query: 256  IKGVGRCGFAWKVAGQGALRILCQK 182
            ++  GRC FAW VAG+    +  +K
Sbjct: 914  VRIAGRCCFAWNVAGRALCMLHAKK 938


>ref|XP_008791530.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
            [Phoenix dactylifera]
          Length = 981

 Score =  336 bits (862), Expect = 2e-89
 Identities = 169/325 (52%), Positives = 229/325 (70%), Gaps = 7/325 (2%)
 Frame = -1

Query: 1135 MKATYVEELVNFVGNAKYAIFFPTKGPRSVADEIANSDFDGDMYWVSRNPQLLESFNPSS 956
            + ATYV++L   VGN+KYAI F TKGPRS+ADE+A  DFDGDMYWVSRNPQLL+ F  S 
Sbjct: 640  LTATYVKDLDKIVGNSKYAILFSTKGPRSLADEMAGGDFDGDMYWVSRNPQLLKYFKASK 699

Query: 955  PWEQKYTSKNVRHRKPTDFSSGELEDELFQQFLTTRFNPSYSMGVAADCWLAYMDRLLTL 776
            PW +      V   KPT FS+ ELE ELF+QFL  RF PSY++G A+DCWL YMDRLLTL
Sbjct: 700  PWVRTAPRIKVTQLKPTQFSNTELERELFEQFLINRFKPSYTIGTASDCWLMYMDRLLTL 759

Query: 775  SDDCTEEKKCMKDKMLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHYLEKSNLG---S 605
             D+C ++K+ +++KML+L DIYYDALDA K+G K+EVPS L+  ++P+++EK  L     
Sbjct: 760  GDECAKQKQLLREKMLELVDIYYDALDASKSGLKIEVPSELKPDQFPNFMEKKYLDKDKE 819

Query: 604  YQSRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYDQYRSEMTD 425
            Y+S+SI GLI++KV     T+ L +NE  +LP F+  EIP SC++ W+E Y +Y +EM+ 
Sbjct: 820  YESKSIFGLIYEKV-KLSQTKDLSSNEIWQLPCFN-LEIPPSCLKSWKEHYTEYLAEMSQ 877

Query: 424  AL---NQDDDVKDDYAEEVNQKYKQMLYDAPELNESTRIREEIYNEALAIYNIVYDYAR- 257
             +   ++  + KD  A +V QKYK MLY A E  ES R  ++I+NEALAIY++ Y+YA+ 
Sbjct: 878  VMSMEHESKESKDWMANKVIQKYKLMLYGASEFEESNRELDDIFNEALAIYHVTYEYAKS 937

Query: 256  IKGVGRCGFAWKVAGQGALRILCQK 182
            ++  GRC FAW VAG+    +  +K
Sbjct: 938  VRIAGRCCFAWNVAGRALCMLHAKK 962


>ref|XP_008791522.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
            [Phoenix dactylifera]
          Length = 1006

 Score =  336 bits (862), Expect = 2e-89
 Identities = 169/325 (52%), Positives = 229/325 (70%), Gaps = 7/325 (2%)
 Frame = -1

Query: 1135 MKATYVEELVNFVGNAKYAIFFPTKGPRSVADEIANSDFDGDMYWVSRNPQLLESFNPSS 956
            + ATYV++L   VGN+KYAI F TKGPRS+ADE+A  DFDGDMYWVSRNPQLL+ F  S 
Sbjct: 665  LTATYVKDLDKIVGNSKYAILFSTKGPRSLADEMAGGDFDGDMYWVSRNPQLLKYFKASK 724

Query: 955  PWEQKYTSKNVRHRKPTDFSSGELEDELFQQFLTTRFNPSYSMGVAADCWLAYMDRLLTL 776
            PW +      V   KPT FS+ ELE ELF+QFL  RF PSY++G A+DCWL YMDRLLTL
Sbjct: 725  PWVRTAPRIKVTQLKPTQFSNTELERELFEQFLINRFKPSYTIGTASDCWLMYMDRLLTL 784

Query: 775  SDDCTEEKKCMKDKMLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHYLEKSNLG---S 605
             D+C ++K+ +++KML+L DIYYDALDA K+G K+EVPS L+  ++P+++EK  L     
Sbjct: 785  GDECAKQKQLLREKMLELVDIYYDALDASKSGLKIEVPSELKPDQFPNFMEKKYLDKDKE 844

Query: 604  YQSRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYDQYRSEMTD 425
            Y+S+SI GLI++KV     T+ L +NE  +LP F+  EIP SC++ W+E Y +Y +EM+ 
Sbjct: 845  YESKSIFGLIYEKV-KLSQTKDLSSNEIWQLPCFN-LEIPPSCLKSWKEHYTEYLAEMSQ 902

Query: 424  AL---NQDDDVKDDYAEEVNQKYKQMLYDAPELNESTRIREEIYNEALAIYNIVYDYAR- 257
             +   ++  + KD  A +V QKYK MLY A E  ES R  ++I+NEALAIY++ Y+YA+ 
Sbjct: 903  VMSMEHESKESKDWMANKVIQKYKLMLYGASEFEESNRELDDIFNEALAIYHVTYEYAKS 962

Query: 256  IKGVGRCGFAWKVAGQGALRILCQK 182
            ++  GRC FAW VAG+    +  +K
Sbjct: 963  VRIAGRCCFAWNVAGRALCMLHAKK 987


>ref|XP_009760372.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X3
            [Nicotiana sylvestris]
          Length = 905

 Score =  336 bits (861), Expect = 2e-89
 Identities = 173/316 (54%), Positives = 225/316 (71%), Gaps = 4/316 (1%)
 Frame = -1

Query: 1129 ATYVEELVNFVGNAKYAIFFPTKGPRSVADEIANSDFDGDMYWVSRNPQLLESFNPSSPW 950
            A  V+ L + VGNAKY IFF TKGPRS A EIAN DFDGD YWVS+NPQLL+ ++ S PW
Sbjct: 560  AVPVKNLGDVVGNAKYGIFFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYYHASRPW 619

Query: 949  EQKYTSKNVRHRKPTDFSSGELEDELFQQFLTTRFNPSYSMGVAADCWLAYMDRLLTLSD 770
             + +++    HR+P DFS+ E+E ELFQ FL TR  P+YSM  A+  WLA MDRLL L  
Sbjct: 620  CRIHSTPKALHREPKDFSAEEMEHELFQTFLETRM-PNYSMADASSSWLALMDRLLMLRK 678

Query: 769  DCT---EEKKCMKDKMLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHYLEKSNLGSYQ 599
            + T   EE K MK+K+ +LTD+YYDA+DAPK+G KV +P  L+V ++PH+LEK     Y 
Sbjct: 679  NNTTENEETKTMKEKLFELTDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLEKKE--EYI 736

Query: 598  SRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYDQYRSEMTDAL 419
            S S+LG I+D+V SFK  +   A E +KLPAF+  +IP +C+RLWEERY +YR EM  AL
Sbjct: 737  STSVLGEIYDRVKSFK-AEAAVAVEIKKLPAFE-VKIPETCLRLWEERYKKYRFEMMQAL 794

Query: 418  NQDDDVKDDYAEEVNQKYKQMLYDAPELNESTRIREEIYNEALAIYNIVYDYARIKG-VG 242
            N   + K+D A+EV +KYKQ+LY+AP++ ES R   +I+N+ALAIY + YDYA+  G V 
Sbjct: 795  NTSSESKNDLADEVVKKYKQLLYEAPDMEESARSTTDIFNDALAIYRVTYDYAKAIGDVK 854

Query: 241  RCGFAWKVAGQGALRI 194
            +CGFAWKVAG    R+
Sbjct: 855  KCGFAWKVAGSALCRL 870


>ref|XP_009760371.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
            [Nicotiana sylvestris]
          Length = 1058

 Score =  336 bits (861), Expect = 2e-89
 Identities = 173/316 (54%), Positives = 225/316 (71%), Gaps = 4/316 (1%)
 Frame = -1

Query: 1129 ATYVEELVNFVGNAKYAIFFPTKGPRSVADEIANSDFDGDMYWVSRNPQLLESFNPSSPW 950
            A  V+ L + VGNAKY IFF TKGPRS A EIAN DFDGD YWVS+NPQLL+ ++ S PW
Sbjct: 713  AVPVKNLGDVVGNAKYGIFFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYYHASRPW 772

Query: 949  EQKYTSKNVRHRKPTDFSSGELEDELFQQFLTTRFNPSYSMGVAADCWLAYMDRLLTLSD 770
             + +++    HR+P DFS+ E+E ELFQ FL TR  P+YSM  A+  WLA MDRLL L  
Sbjct: 773  CRIHSTPKALHREPKDFSAEEMEHELFQTFLETRM-PNYSMADASSSWLALMDRLLMLRK 831

Query: 769  DCT---EEKKCMKDKMLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHYLEKSNLGSYQ 599
            + T   EE K MK+K+ +LTD+YYDA+DAPK+G KV +P  L+V ++PH+LEK     Y 
Sbjct: 832  NNTTENEETKTMKEKLFELTDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLEKKE--EYI 889

Query: 598  SRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYDQYRSEMTDAL 419
            S S+LG I+D+V SFK  +   A E +KLPAF+  +IP +C+RLWEERY +YR EM  AL
Sbjct: 890  STSVLGEIYDRVKSFK-AEAAVAVEIKKLPAFE-VKIPETCLRLWEERYKKYRFEMMQAL 947

Query: 418  NQDDDVKDDYAEEVNQKYKQMLYDAPELNESTRIREEIYNEALAIYNIVYDYARIKG-VG 242
            N   + K+D A+EV +KYKQ+LY+AP++ ES R   +I+N+ALAIY + YDYA+  G V 
Sbjct: 948  NTSSESKNDLADEVVKKYKQLLYEAPDMEESARSTTDIFNDALAIYRVTYDYAKAIGDVK 1007

Query: 241  RCGFAWKVAGQGALRI 194
            +CGFAWKVAG    R+
Sbjct: 1008 KCGFAWKVAGSALCRL 1023


>ref|XP_009760370.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
            [Nicotiana sylvestris]
          Length = 1060

 Score =  336 bits (861), Expect = 2e-89
 Identities = 173/316 (54%), Positives = 225/316 (71%), Gaps = 4/316 (1%)
 Frame = -1

Query: 1129 ATYVEELVNFVGNAKYAIFFPTKGPRSVADEIANSDFDGDMYWVSRNPQLLESFNPSSPW 950
            A  V+ L + VGNAKY IFF TKGPRS A EIAN DFDGD YWVS+NPQLL+ ++ S PW
Sbjct: 715  AVPVKNLGDVVGNAKYGIFFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYYHASRPW 774

Query: 949  EQKYTSKNVRHRKPTDFSSGELEDELFQQFLTTRFNPSYSMGVAADCWLAYMDRLLTLSD 770
             + +++    HR+P DFS+ E+E ELFQ FL TR  P+YSM  A+  WLA MDRLL L  
Sbjct: 775  CRIHSTPKALHREPKDFSAEEMEHELFQTFLETRM-PNYSMADASSSWLALMDRLLMLRK 833

Query: 769  DCT---EEKKCMKDKMLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHYLEKSNLGSYQ 599
            + T   EE K MK+K+ +LTD+YYDA+DAPK+G KV +P  L+V ++PH+LEK     Y 
Sbjct: 834  NNTTENEETKTMKEKLFELTDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLEKKE--EYI 891

Query: 598  SRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYDQYRSEMTDAL 419
            S S+LG I+D+V SFK  +   A E +KLPAF+  +IP +C+RLWEERY +YR EM  AL
Sbjct: 892  STSVLGEIYDRVKSFK-AEAAVAVEIKKLPAFE-VKIPETCLRLWEERYKKYRFEMMQAL 949

Query: 418  NQDDDVKDDYAEEVNQKYKQMLYDAPELNESTRIREEIYNEALAIYNIVYDYARIKG-VG 242
            N   + K+D A+EV +KYKQ+LY+AP++ ES R   +I+N+ALAIY + YDYA+  G V 
Sbjct: 950  NTSSESKNDLADEVVKKYKQLLYEAPDMEESARSTTDIFNDALAIYRVTYDYAKAIGDVK 1009

Query: 241  RCGFAWKVAGQGALRI 194
            +CGFAWKVAG    R+
Sbjct: 1010 KCGFAWKVAGSALCRL 1025


>ref|XP_010095361.1| putative RNA-dependent RNA polymerase 3 [Morus notabilis]
            gi|587870497|gb|EXB59780.1| putative RNA-dependent RNA
            polymerase 3 [Morus notabilis]
          Length = 521

 Score =  334 bits (857), Expect = 7e-89
 Identities = 172/334 (51%), Positives = 222/334 (66%), Gaps = 20/334 (5%)
 Frame = -1

Query: 1135 MKATYVEELVNFVGNAKYAIFFPTKGPRSVADEIANSDFDGDMYWVSRNPQLLESFNPSS 956
            +KATY+EE+ +FVGNAKYAIFF  KGPRS+ADE+A  DFDGDM+WVSRNP+LL+ F PS 
Sbjct: 170  LKATYIEEMESFVGNAKYAIFFSKKGPRSIADEMAGGDFDGDMFWVSRNPELLKYFKPSD 229

Query: 955  PWEQKYTSKNVRHRKPTDFSSGELEDELFQQFLTTRFNPSYSMGVAADCWLAYMDRLLTL 776
            PW +K ++  V+ ++P D S  ELEDEL + FLT RF PS++   A++ WLA MDR LTL
Sbjct: 230  PWIKKSSTGKVKSKQPIDLSDRELEDELIKLFLTVRFKPSFAKSEASEGWLALMDRFLTL 289

Query: 775  SDDCTEEKKCMKDKMLQLTDIYYDALDAPKTGEK-------------------VEVPSNL 653
             DDC  EK  +KD + +L DIYYDALDAPK G K                   VEVP  L
Sbjct: 290  GDDCVAEKNAVKDNLFELVDIYYDALDAPKQGGKQQDLAKFFEAYAALELSFQVEVPREL 349

Query: 652  RVSRYPHYLEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCM 473
            + +R+PHY+EK N  S+ SRSILG I+D+V +++        E  KLP F+  E+P +C+
Sbjct: 350  KPNRFPHYMEKQN--SFHSRSILGWIYDEVDAYQLEDH-SNKEIFKLPHFE-VEVPEACL 405

Query: 472  RLWEERYDQYRSEMTDALNQDDDVKDDYAEEVNQKYKQMLYDAPELNESTRIREEIYNEA 293
              W+  Y  YR +M DAL   D  K + AEEV +KYK++LY A EL EST+  EEIYNEA
Sbjct: 406  TKWKAHYKDYRDDMCDALLAKDVGKTEAAEEVKRKYKRLLYGAEELEESTKKMEEIYNEA 465

Query: 292  LAIYNIVYDYA-RIKGVGRCGFAWKVAGQGALRI 194
            LAIY++ YDYA   + V  C FAW +AG   L++
Sbjct: 466  LAIYHVCYDYAISQRKVSYCSFAWNIAGSALLKL 499


>ref|XP_009780070.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
            [Nicotiana sylvestris]
          Length = 1021

 Score =  334 bits (856), Expect = 9e-89
 Identities = 171/315 (54%), Positives = 220/315 (69%), Gaps = 1/315 (0%)
 Frame = -1

Query: 1135 MKATYVEELVNFVGNAKYAIFFPTKGPRSVADEIANSDFDGDMYWVSRNPQLLESFNPSS 956
            MKA YVEELV+ VG+AKY I F TKGPRS A EIAN DFDGDMYWVS N +L++S+  S 
Sbjct: 689  MKARYVEELVDIVGDAKYGIVFSTKGPRSAASEIANGDFDGDMYWVSINRKLVDSYRASK 748

Query: 955  PWEQKYTSKNVRHRKPTDFSSGELEDELFQQFLTTRFNPSYSMGVAADCWLAYMDRLLTL 776
            PW + +++     +KPT+FS+ ELE ELF+QFL  + +   SM VAAD WLA+MDRLL L
Sbjct: 749  PWTRTHSTPKAVSKKPTEFSADELEYELFRQFLRAK-SKGASMSVAADSWLAFMDRLLML 807

Query: 775  SDDCTEEKKCMKDKMLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHYLEKSNLGSYQS 596
             DD  +    +K KML L DIYYDALDAPK+G+KV +P +L+ +R+PHY+E+ N  SY S
Sbjct: 808  RDDDADGMHSLKGKMLHLIDIYYDALDAPKSGKKVSIPHDLKANRFPHYMERGNPFSYHS 867

Query: 595  RSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYDQYRSEMTDALN 416
             SILG I+D V S+   + L   E  KLP FD  EIP  C  LW ERY++Y+ +MT A+N
Sbjct: 868  TSILGQIYDYVDSY-PDEDLCITEISKLPCFD-VEIPDECTTLWRERYEEYKKDMTMAMN 925

Query: 415  QDDDVKDDYAEEVNQKYKQMLYDAPELNESTRIREEIYNEALAIYNIVYDYARIK-GVGR 239
               +VK+    EV +KYK++LY APE  +S R  E+I+NEALA+Y++ YD ARI   + +
Sbjct: 926  SGCEVKNSACNEVIKKYKKLLYGAPEFEQSVRKTEDIFNEALALYHVTYDNARITYSIEK 985

Query: 238  CGFAWKVAGQGALRI 194
            CGFAWKVAG    RI
Sbjct: 986  CGFAWKVAGSALCRI 1000