BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00003496
         (3274 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   175   e-101
gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]                       144   e-100
emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]        137   1e-99
gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Ja...   137   1e-99
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s...   137   2e-99
emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]         137   2e-99
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni...   137   2e-99
emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]         137   3e-99
emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]         137   4e-99
gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subc...   137   4e-99
gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subc...   137   5e-99
gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]     137   6e-99
gb|ABF96953.1| retrotransposon protein, putative, Ty1-copia subc...   136   8e-99
gb|AAS01934.1| putative Integrase core domain containing protein...   136   8e-99
gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subc...   137   2e-98
gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-...   137   2e-98
ref|XP_008387315.1| PREDICTED: uncharacterized protein LOC103449...   139   4e-98
gb|AAO60021.1| putative polyprotein [Oryza sativa Japonica Group...   135   5e-98
gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]     137   6e-98
emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]         134   1e-97

>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  175 bits (443), Expect(4) = e-101
 Identities = 117/314 (37%), Positives = 162/314 (51%), Gaps = 9/314 (2%)
 Frame = +3

Query: 612  EHNNRILKEMIISMLISSGLPAALWGEAVLLTSIS*IKYPFKNQMKLHMVYGTVDDLLMN 791
            E  NR LKEM+ +MLISS LP  +WGEA+L  +    K P K   K              
Sbjct: 632  ERKNRTLKEMMNAMLISSSLPQNMWGEAILTANYLLNKVPKKKAEKTPYELWKGRKPSYT 691

Query: 792  VSKCGGVXXXXXXXXXKELD*NQKC*LCFRIGYIEYTSTNRFLVVCSDF---------F* 944
              +  G          K++    K   C  IGY   ++  RFLV  S+            
Sbjct: 692  YLRMWGCLAKVAVPPPKKVKIGPKTIDCIFIGYAHNSNAYRFLVYESNIPDIHKNTIMES 751

Query: 945  HWCEYYYGI*GC*VXXXXXXXXXXXXEMCC*SPRFIFK*SELILKEDEVDVEPKRSKIIR 1124
                ++  +  C              E    S R +    E   + +EV+VEP+RSK +R
Sbjct: 752  RNASFFEDVFPC-----------KSKEEPSSSKRML----ESQDQNEEVEVEPRRSKRVR 796

Query: 1125 LETSYETDFITCLA*SEPQTCKEALISTETPFW*EASFSEMDSVRWNQTWELSSLPPGCK 1304
             E S+  DF+T +   EPQT KEA+ STE   W EA  SE+DS+  N TWEL  LPPGCK
Sbjct: 797  TEKSFGPDFLTFMLEGEPQTFKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVDLPPGCK 856

Query: 1305 TMGCK*VFKRKR*VDETVEKY*AKLVAKGYKLKEGVDFLDSNSIVTEITSVEILIVIAAI 1484
             +  K +FKRK  VD +++KY A+LV KGY+  EG+D+ D+ S VT I S+ +++ IAA+
Sbjct: 857  PLSSKWIFKRKMKVDGSIDKYKARLVIKGYRQTEGLDYFDTYSPVTRINSIRMVLAIAAL 916

Query: 1485 KNVEIHQMDVKTAF 1526
            +N+EIHQMD+K  +
Sbjct: 917  RNLEIHQMDMKEIY 930



 Score =  121 bits (304), Expect(4) = e-101
 Identities = 77/156 (49%), Positives = 97/156 (62%), Gaps = 20/156 (12%)
 Frame = +2

Query: 2228 GLYDANWIVDSEESKSTSGYGFTLTCGFVVGRFPNKH--IAQFIMESESIALDKA*EGAE 2401
            G  DANWI + ++SKS SGY FTL  G  V    +K   IA+  MESE IALDK  E AE
Sbjct: 1160 GYSDANWISNVKDSKSHSGYVFTLG-GAAVSWKSSKQTVIARSTMESEFIALDKCGEEAE 1218

Query: 2402 CLR*FLEDIPLWHRPVPAISIHCVSQAIIVKAK------------------K*LISIGVI 2527
             LR FLEDIP W +PVP I IHC SQ+ I +A+                  + L+S GVI
Sbjct: 1219 WLRHFLEDIPRWSKPVPPICIHCDSQSAIGRAQSNMYNGKSRHIRRRHNTIRQLLSTGVI 1278

Query: 2528 SIDWIKSKENIAQSLTKGLYKEIVKNASRGLGLKLI 2635
            S+D++KSK+NIA  LTKGL +E+V+ +S G+ LK I
Sbjct: 1279 SVDYVKSKDNIADPLTKGLNRELVEKSSXGMXLKPI 1314



 Score = 97.1 bits (240), Expect(4) = e-101
 Identities = 54/129 (41%), Positives = 78/129 (60%)
 Frame = +3

Query: 1815 KHALNENIDLKDLGPFDVILGMRIRR*SNIYKS*SFSLC*VVLKRYNQSDCKPACTSYDY 1994
            K+ LN   D+KD+G  DVILG++I+R SN            +L ++++ +   A T  D 
Sbjct: 1018 KNMLNSRFDMKDMGLADVILGIKIKRTSNELILSQSHYVDKILGKFDKDNSGVARTPVDV 1077

Query: 1995 SCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSKLSGYNCSPEQENSDALSRV 2174
            +  L KNKG  VS +EYS++IG LM LM+C  PDIAY V KLS Y  +P  ++   + RV
Sbjct: 1078 TLHLSKNKGESVSQVEYSRIIGSLMYLMSCTRPDIAYAVGKLSRYTSNPGAKHWQGIIRV 1137

Query: 2175 LWYLKYSFD 2201
            L YL+++ D
Sbjct: 1138 LKYLRFTRD 1146



 Score = 48.9 bits (115), Expect(4) = e-101
 Identities = 25/52 (48%), Positives = 32/52 (61%)
 Frame = +2

Query: 1547 KEIYIDQPEDFVVKGCEYKVCNLKNLCMVFK*ARKQ*HGKFNHVIMDSGFKL 1702
            KEIY++QPE F   G E KVC L       K A KQ H KF++V++  GFK+
Sbjct: 927  KEIYMEQPEGFSAPGQEKKVCKLVKSLYGLKQAPKQWHEKFDNVMLSHGFKI 978


>gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]
          Length = 1264

 Score =  144 bits (364), Expect(7) = e-100
 Identities = 77/154 (50%), Positives = 102/154 (66%)
 Frame = +3

Query: 1065 ELILKEDEVDVEPKRSKIIRLETSYETDFITCLA*SEPQTCKEALISTETPFW*EASFSE 1244
            E++L+ED+ D  PKRSK  R+E S+  DFI  L    P T  EA  S++   W EA  +E
Sbjct: 717  EIVLEEDDNDA-PKRSKRQRVEKSFGDDFIVYLVDDTPTTIAEAFASSDADDWKEAVHNE 775

Query: 1245 MDSVRWNQTWELSSLPPGCKTMGCK*VFKRKR*VDETVEKY*AKLVAKGYKLKEGVDFLD 1424
            MDS+  N TWE++  P GCK +GCK VFK+K   D T+EKY A+LVAKGY  KEG DF D
Sbjct: 776  MDSILSNGTWEITDRPYGCKPVGCKWVFKKKLKPDGTIEKYKARLVAKGYTQKEGEDFFD 835

Query: 1425 SNSIVTEITSVEILIVIAAIKNVEIHQMDVKTAF 1526
            + S V  +T++ +L+ +AA   + +HQMDVKTAF
Sbjct: 836  TYSPVARMTTIRVLLSLAASYGLLVHQMDVKTAF 869



 Score = 88.6 bits (218), Expect(7) = e-100
 Identities = 50/125 (40%), Positives = 75/125 (60%)
 Frame = +3

Query: 1815 KHALNENIDLKDLGPFDVILGMRIRR*SNIYKS*SFSLC*VVLKRYNQSDCKPACTSYDY 1994
            K  L+++ D+KDLG  DVIL +++ +               VLKR+  S+CKP+ T YD 
Sbjct: 967  KSFLSKSFDMKDLGEADVILNIKLIKADGGITLSQSHYVEKVLKRFGFSECKPSPTPYDP 1026

Query: 1995 SCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSKLSGYNCSPEQENSDALSRV 2174
            S +L+KNK  G+  L YS+++G LM L     PDI++ VSKLS +  +P  ++  AL RV
Sbjct: 1027 SVTLRKNKRIGLDQLRYSQIVGSLMYLAGATRPDISFAVSKLSRFMSNPGTDHWHALERV 1086

Query: 2175 LWYLK 2189
            + YL+
Sbjct: 1087 MRYLQ 1091



 Score = 87.0 bits (214), Expect(7) = e-100
 Identities = 57/154 (37%), Positives = 87/154 (56%), Gaps = 20/154 (12%)
 Frame = +2

Query: 2228 GLYDANWIVDSEESKSTSGYGFTLTCGFVVGRFPNKHI-AQFIMESESIALDKA*EGAEC 2404
            G  D+NWI D++E  +TSGY FT+  G V  R   + I  +  ME+E  ALD A   AE 
Sbjct: 1109 GYSDSNWISDADELYATSGYVFTIGGGAVSWRSCKQTILTRSTMEAELAALDTATVEAEW 1168

Query: 2405 LR*FLEDIPLWHRPVPAISIHCVSQAIIVK-------------AKK*LISI------GVI 2527
            LR  L D+P+  +P+PAI ++C +Q +I K              K+ L S+      GVI
Sbjct: 1169 LRELLMDLPVVEKPIPAILMNCDNQTVIAKVTSSKDNGKSSRHVKRRLKSVRKLRNSGVI 1228

Query: 2528 SIDWIKSKENIAQSLTKGLYKEIVKNASRGLGLK 2629
            S+ +I + +N+A   TKGL + +++ ASR +G++
Sbjct: 1229 SVTYISTDKNLADPFTKGLPRNVIEIASREMGMR 1262



 Score = 52.8 bits (125), Expect(7) = e-100
 Identities = 28/59 (47%), Positives = 36/59 (61%)
 Frame = +2

Query: 1526 F*NRELGKEIYIDQPEDFVVKGCEYKVCNLKNLCMVFK*ARKQ*HGKFNHVIMDSGFKL 1702
            F N EL +EIY++QP+ FVVKG E KVC L       K A KQ H KF+  +  +GF +
Sbjct: 869  FLNGELDEEIYMEQPDGFVVKGQESKVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFAI 927



 Score = 50.8 bits (120), Expect(7) = e-100
 Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
 Frame = +2

Query: 671 TCGLV----GGGSPLN*YILNKVPF*ESDETPYGLWNGR*PSYECVKVWGRLTKIVIPLP 838
           TCGL     G     + ++LN++P  + ++TPY  W GR PS   ++ WG + K+ +P+ 
Sbjct: 573 TCGLSKAWWGEAVLTSCHVLNRIPMGKEEKTPYEKWVGRKPSLSYLRTWGCMAKVNVPIN 632

Query: 839 KRTRLKPK 862
           K+ +L P+
Sbjct: 633 KKRKLGPR 640



 Score = 40.0 bits (92), Expect(7) = e-100
 Identities = 23/42 (54%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
 Frame = +1

Query: 1699 INESDKYVYK*LVKDVCVIVCLYVDDML--DTNIDVINSTKN 1818
            INE+D+ VY        VI+CLYVDD+L   TNIDVIN  K+
Sbjct: 927  INEADRCVYYRCGGGEGVILCLYVDDILIFGTNIDVINEVKS 968



 Score = 37.4 bits (85), Expect(7) = e-100
 Identities = 20/48 (41%), Positives = 28/48 (58%)
 Frame = +1

Query: 859  KNVDCVFV*GILSILLQIDFWLCVLIFSDIGVNIITESRDAEFFEHVY 1002
            + VDCVF+ G  S  +   F +      D+ V+ I ESRDA FFEH++
Sbjct: 640  RTVDCVFL-GYASCSIAYRFLVVKSEVPDVYVDTIMESRDATFFEHIF 686


>emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]
          Length = 1314

 Score =  137 bits (345), Expect(7) = 1e-99
 Identities = 71/152 (46%), Positives = 97/152 (63%)
 Frame = +3

Query: 1071 ILKEDEVDVEPKRSKIIRLETSYETDFITCLA*SEPQTCKEALISTETPFW*EASFSEMD 1250
            ++ E++V   P+RSK  R   S+  DF   L    P++  EA  S +  +W EA  SEMD
Sbjct: 728  LVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 787

Query: 1251 SVRWNQTWELSSLPPGCKTMGCK*VFKRKR*VDETVEKY*AKLVAKGYKLKEGVDFLDSN 1430
            S+  N TWE++  P GCK +GCK VFK+K   D T+EKY A+LVAKGY  KEG DF D+ 
Sbjct: 788  SIIANGTWEVTEQPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTY 847

Query: 1431 SIVTEITSVEILIVIAAIKNVEIHQMDVKTAF 1526
            S V  +T++ +L+ +AA   + +HQMDVKTAF
Sbjct: 848  SPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 879



 Score = 95.5 bits (236), Expect(7) = 1e-99
 Identities = 63/156 (40%), Positives = 90/156 (57%), Gaps = 20/156 (12%)
 Frame = +2

Query: 2228 GLYDANWIVDSEESKSTSGYGFTLTCGFVVGRFPNKHI-AQFIMESESIALDKA*EGAEC 2404
            G  D+NWI D +E K+TSGY FTL  G V  R   + I  +  ME+E  ALD A   AE 
Sbjct: 1119 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1178

Query: 2405 LR*FLEDIPLWHRPVPAISIHCVSQAIIVK-------------AKK*LISI------GVI 2527
            LR  L D+P+  +PVPAI ++C +Q +IVK              K+ L S+      GVI
Sbjct: 1179 LRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVI 1238

Query: 2528 SIDWIKSKENIAQSLTKGLYKEIVKNASRGLGLKLI 2635
            ++D+I++  N+A   TKGL + ++ NAS+ +GL+ I
Sbjct: 1239 TLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPI 1274



 Score = 89.4 bits (220), Expect(7) = 1e-99
 Identities = 53/130 (40%), Positives = 76/130 (58%)
 Frame = +3

Query: 1815 KHALNENIDLKDLGPFDVILGMRIRR*SNIYKS*SFSLC*VVLKRYNQSDCKPACTSYDY 1994
            K  L++N D+KDLG  DVIL +++ R  N            +L R+   D KP+ T YD 
Sbjct: 977  KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 1036

Query: 1995 SCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSKLSGYNCSPEQENSDALSRV 2174
            S  L+KNK    + LEYS++IG LM L +   PDI++ VSKLS +  +P  ++  AL RV
Sbjct: 1037 SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1096

Query: 2175 LWYLKYSFDL 2204
            + YLK + +L
Sbjct: 1097 MRYLKGTVEL 1106



 Score = 54.3 bits (129), Expect(7) = 1e-99
 Identities = 22/51 (43%), Positives = 34/51 (66%)
 Frame = +2

Query: 710 YILNKVPF*ESDETPYGLWNGR*PSYECVKVWGRLTKIVIPLPKRTRLKPK 862
           ++LN+VP    D+TPY +W GR PS   ++ WG L K+ +P+ K+ +L PK
Sbjct: 600 HVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPK 650



 Score = 52.4 bits (124), Expect(7) = 1e-99
 Identities = 28/57 (49%), Positives = 35/57 (61%)
 Frame = +2

Query: 1526 F*NRELGKEIYIDQPEDFVVKGCEYKVCNLKNLCMVFK*ARKQ*HGKFNHVIMDSGF 1696
            F N EL +EIY+DQP+ FVV+G E KVC L       K A KQ H KF+  +  +GF
Sbjct: 879  FLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGF 935



 Score = 37.7 bits (86), Expect(7) = 1e-99
 Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
 Frame = +1

Query: 1699 INESDKYVYK*LVKDVCVIVCLYVDDML--DTNIDVINSTKN 1818
            +NE+DK VY        VI+CLYVDD+L   TN++VIN  K+
Sbjct: 937  VNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 978



 Score = 32.3 bits (72), Expect(7) = 1e-99
 Identities = 21/54 (38%), Positives = 26/54 (48%)
 Frame = +1

Query: 859  KNVDCVFV*GILSILLQIDFWLCVLIFSDIGVNIITESRDAEFFEHVYSKPVPH 1020
            K VDCVF+ G     +   F +      D+ V II ESRDA FFE  +     H
Sbjct: 650  KTVDCVFL-GYAHHSIAYRFLIVKSEVLDMHVGIIMESRDATFFESFFPMKDTH 702


>gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  137 bits (345), Expect(7) = 1e-99
 Identities = 71/152 (46%), Positives = 97/152 (63%)
 Frame = +3

Query: 1071 ILKEDEVDVEPKRSKIIRLETSYETDFITCLA*SEPQTCKEALISTETPFW*EASFSEMD 1250
            ++ E++V   P+RSK  R   S+  DF   L    P++  EA  S +  +W EA  SEMD
Sbjct: 756  LVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 815

Query: 1251 SVRWNQTWELSSLPPGCKTMGCK*VFKRKR*VDETVEKY*AKLVAKGYKLKEGVDFLDSN 1430
            S+  N TWE++  P GCK +GCK VFK+K   D T+EKY A+LVAKGY  KEG DF D+ 
Sbjct: 816  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTY 875

Query: 1431 SIVTEITSVEILIVIAAIKNVEIHQMDVKTAF 1526
            S V  +T++ +L+ +AA   + +HQMDVKTAF
Sbjct: 876  SPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 907



 Score = 95.1 bits (235), Expect(7) = 1e-99
 Identities = 62/154 (40%), Positives = 89/154 (57%), Gaps = 20/154 (12%)
 Frame = +2

Query: 2228 GLYDANWIVDSEESKSTSGYGFTLTCGFVVGRFPNKHI-AQFIMESESIALDKA*EGAEC 2404
            G  D+NWI D +E K+TSGY FTL  G V  R   + I  +  ME+E  ALD A   AE 
Sbjct: 1147 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1206

Query: 2405 LR*FLEDIPLWHRPVPAISIHCVSQAIIVK-------------AKK*LISI------GVI 2527
            LR  L D+P+  +PVPAI ++C +Q +IVK              K+ L S+      GVI
Sbjct: 1207 LRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNNSKDNMKSSRHVKRRLKSVRKLRNSGVI 1266

Query: 2528 SIDWIKSKENIAQSLTKGLYKEIVKNASRGLGLK 2629
            ++D+I++  N+A   TKGL + ++ NAS+ +GL+
Sbjct: 1267 TLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1300



 Score = 91.7 bits (226), Expect(7) = 1e-99
 Identities = 54/130 (41%), Positives = 77/130 (59%)
 Frame = +3

Query: 1815 KHALNENIDLKDLGPFDVILGMRIRR*SNIYKS*SFSLC*VVLKRYNQSDCKPACTSYDY 1994
            K  L++N D+KDLG  DVIL +++ R  N            +L R+   D KP+ T YD 
Sbjct: 1005 KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 1064

Query: 1995 SCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSKLSGYNCSPEQENSDALSRV 2174
            S SL+KNK    + LEYS++IG LM L +   PDI++ VSKLS +  +P  ++  AL RV
Sbjct: 1065 SLSLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1124

Query: 2175 LWYLKYSFDL 2204
            + YLK + +L
Sbjct: 1125 MRYLKGTVEL 1134



 Score = 54.3 bits (129), Expect(7) = 1e-99
 Identities = 22/51 (43%), Positives = 34/51 (66%)
 Frame = +2

Query: 710 YILNKVPF*ESDETPYGLWNGR*PSYECVKVWGRLTKIVIPLPKRTRLKPK 862
           ++LN+VP    D+TPY +W GR PS   ++ WG L K+ +P+ K+ +L PK
Sbjct: 628 HVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPK 678



 Score = 51.2 bits (121), Expect(7) = 1e-99
 Identities = 27/57 (47%), Positives = 35/57 (61%)
 Frame = +2

Query: 1526 F*NRELGKEIYIDQPEDFVVKGCEYKVCNLKNLCMVFK*ARKQ*HGKFNHVIMDSGF 1696
            F N EL +EIY+DQP+ FV++G E KVC L       K A KQ H KF+  +  +GF
Sbjct: 907  FLNGELDEEIYMDQPDGFVLEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGF 963



 Score = 38.5 bits (88), Expect(7) = 1e-99
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
 Frame = +1

Query: 1699 INESDKYVYK*LVKDVCVIVCLYVDDML--DTNIDVINSTKN 1818
            +NE+DK VY        VI+CLYVDD+L   TNI+VIN  K+
Sbjct: 965  VNEADKCVYYRHGGGEGVILCLYVDDILIFGTNIEVINEVKS 1006



 Score = 30.8 bits (68), Expect(7) = 1e-99
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = +1

Query: 859  KNVDCVFV*GILSILLQIDFWLCVLIFSDIGVNIITESRDAEFFEHVYSKPVPH 1020
            K VDCVF+ G     +   F +      D+ V  I ESRDA FFE  +     H
Sbjct: 678  KTVDCVFL-GYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTH 730


>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
            Group]
          Length = 1911

 Score =  137 bits (345), Expect(7) = 2e-99
 Identities = 71/152 (46%), Positives = 97/152 (63%)
 Frame = +3

Query: 1071 ILKEDEVDVEPKRSKIIRLETSYETDFITCLA*SEPQTCKEALISTETPFW*EASFSEMD 1250
            ++ E++V   P+RSK  R   S+  DF   L    P++  EA  S +  +W EA  SEMD
Sbjct: 756  LVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 815

Query: 1251 SVRWNQTWELSSLPPGCKTMGCK*VFKRKR*VDETVEKY*AKLVAKGYKLKEGVDFLDSN 1430
            S+  N TWE++  P GCK +GCK VFK+K   D T+EKY A+LVAKGY  KEG DF D+ 
Sbjct: 816  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTY 875

Query: 1431 SIVTEITSVEILIVIAAIKNVEIHQMDVKTAF 1526
            S V  +T++ +L+ +AA   + +HQMDVKTAF
Sbjct: 876  SPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 907



 Score = 95.5 bits (236), Expect(7) = 2e-99
 Identities = 63/156 (40%), Positives = 90/156 (57%), Gaps = 20/156 (12%)
 Frame = +2

Query: 2228 GLYDANWIVDSEESKSTSGYGFTLTCGFVVGRFPNKHI-AQFIMESESIALDKA*EGAEC 2404
            G  D+NWI D +E K+TSGY FTL  G V  R   + I  +  ME+E  ALD A   AE 
Sbjct: 1147 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1206

Query: 2405 LR*FLEDIPLWHRPVPAISIHCVSQAIIVK-------------AKK*LISI------GVI 2527
            LR  L D+P+  +PVPAI ++C +Q +IVK              K+ L S+      GVI
Sbjct: 1207 LRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNNSKDNMKSSRHVKRRLKSVRKLRNSGVI 1266

Query: 2528 SIDWIKSKENIAQSLTKGLYKEIVKNASRGLGLKLI 2635
            ++D+I++  N+A   TKGL + ++ NAS+ +GL+ I
Sbjct: 1267 TLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPI 1302



 Score = 91.7 bits (226), Expect(7) = 2e-99
 Identities = 54/130 (41%), Positives = 77/130 (59%)
 Frame = +3

Query: 1815 KHALNENIDLKDLGPFDVILGMRIRR*SNIYKS*SFSLC*VVLKRYNQSDCKPACTSYDY 1994
            K  L++N D+KDLG  DVIL +++ R  N            +L R+   D KP+ T YD 
Sbjct: 1005 KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 1064

Query: 1995 SCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSKLSGYNCSPEQENSDALSRV 2174
            S SL+KNK    + LEYS++IG LM L +   PDI++ VSKLS +  +P  ++  AL RV
Sbjct: 1065 SLSLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1124

Query: 2175 LWYLKYSFDL 2204
            + YLK + +L
Sbjct: 1125 MRYLKGTVEL 1134



 Score = 54.3 bits (129), Expect(7) = 2e-99
 Identities = 22/51 (43%), Positives = 34/51 (66%)
 Frame = +2

Query: 710 YILNKVPF*ESDETPYGLWNGR*PSYECVKVWGRLTKIVIPLPKRTRLKPK 862
           ++LN+VP    D+TPY +W GR PS   ++ WG L K+ +P+ K+ +L PK
Sbjct: 628 HVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPK 678



 Score = 50.1 bits (118), Expect(7) = 2e-99
 Identities = 27/57 (47%), Positives = 35/57 (61%)
 Frame = +2

Query: 1526 F*NRELGKEIYIDQPEDFVVKGCEYKVCNLKNLCMVFK*ARKQ*HGKFNHVIMDSGF 1696
            F N EL +EIY+DQP+ FV++G E KVC L       K A KQ H KF+  +  +GF
Sbjct: 907  FLNGELDEEIYMDQPDGFVLEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTFAGF 963



 Score = 38.5 bits (88), Expect(7) = 2e-99
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
 Frame = +1

Query: 1699 INESDKYVYK*LVKDVCVIVCLYVDDML--DTNIDVINSTKN 1818
            +NE+DK VY        VI+CLYVDD+L   TNI+VIN  K+
Sbjct: 965  VNEADKCVYYRHGGGEGVILCLYVDDILIFGTNIEVINEVKS 1006



 Score = 30.8 bits (68), Expect(7) = 2e-99
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = +1

Query: 859  KNVDCVFV*GILSILLQIDFWLCVLIFSDIGVNIITESRDAEFFEHVYSKPVPH 1020
            K VDCVF+ G     +   F +      D+ V  I ESRDA FFE  +     H
Sbjct: 678  KTVDCVFL-GYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTH 730


>emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]
          Length = 1302

 Score =  137 bits (346), Expect(7) = 2e-99
 Identities = 71/152 (46%), Positives = 97/152 (63%)
 Frame = +3

Query: 1071 ILKEDEVDVEPKRSKIIRLETSYETDFITCLA*SEPQTCKEALISTETPFW*EASFSEMD 1250
            ++ E++V   P+RSK  R   S+  DF   L    P++  EA  S +  +W EA  SEMD
Sbjct: 756  LVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAICSEMD 815

Query: 1251 SVRWNQTWELSSLPPGCKTMGCK*VFKRKR*VDETVEKY*AKLVAKGYKLKEGVDFLDSN 1430
            S+  N TWE++  P GCK +GCK VFK+K   D T+EKY A+LVAKGY  KEG DF D+ 
Sbjct: 816  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTY 875

Query: 1431 SIVTEITSVEILIVIAAIKNVEIHQMDVKTAF 1526
            S V  +T++ +L+ +AA   + +HQMDVKTAF
Sbjct: 876  SPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 907



 Score = 95.1 bits (235), Expect(7) = 2e-99
 Identities = 62/154 (40%), Positives = 89/154 (57%), Gaps = 20/154 (12%)
 Frame = +2

Query: 2228 GLYDANWIVDSEESKSTSGYGFTLTCGFVVGRFPNKHI-AQFIMESESIALDKA*EGAEC 2404
            G  D+NWI D +E K+TSGY FTL  G V  R   + I  +  ME+E  ALD A   AE 
Sbjct: 1147 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1206

Query: 2405 LR*FLEDIPLWHRPVPAISIHCVSQAIIVK-------------AKK*LISI------GVI 2527
            LR  L D+P+  +PVPAI ++C +Q +IVK              K+ L S+      GVI
Sbjct: 1207 LRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVI 1266

Query: 2528 SIDWIKSKENIAQSLTKGLYKEIVKNASRGLGLK 2629
            ++D+I++  N+A   TKGL + ++ NAS+ +GL+
Sbjct: 1267 TLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1300



 Score = 89.4 bits (220), Expect(7) = 2e-99
 Identities = 53/130 (40%), Positives = 76/130 (58%)
 Frame = +3

Query: 1815 KHALNENIDLKDLGPFDVILGMRIRR*SNIYKS*SFSLC*VVLKRYNQSDCKPACTSYDY 1994
            K  L++N D+KDLG  DVIL +++ R  N            +L R+   D KP+ T YD 
Sbjct: 1005 KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 1064

Query: 1995 SCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSKLSGYNCSPEQENSDALSRV 2174
            S  L+KNK    + LEYS++IG LM L +   PDI++ VSKLS +  +P  ++  AL RV
Sbjct: 1065 SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1124

Query: 2175 LWYLKYSFDL 2204
            + YLK + +L
Sbjct: 1125 MRYLKGTVEL 1134



 Score = 54.3 bits (129), Expect(7) = 2e-99
 Identities = 22/51 (43%), Positives = 34/51 (66%)
 Frame = +2

Query: 710 YILNKVPF*ESDETPYGLWNGR*PSYECVKVWGRLTKIVIPLPKRTRLKPK 862
           ++LN+VP    D+TPY +W GR PS   ++ WG L K+ +P+ K+ +L PK
Sbjct: 628 HVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPK 678



 Score = 53.1 bits (126), Expect(7) = 2e-99
 Identities = 28/57 (49%), Positives = 36/57 (63%)
 Frame = +2

Query: 1526 F*NRELGKEIYIDQPEDFVVKGCEYKVCNLKNLCMVFK*ARKQ*HGKFNHVIMDSGF 1696
            F N EL +EIY+DQP+ FVV+G E KVC L       K A KQ H KF+  ++ +GF
Sbjct: 907  FLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLISAGF 963



 Score = 37.7 bits (86), Expect(7) = 2e-99
 Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
 Frame = +1

Query: 1699 INESDKYVYK*LVKDVCVIVCLYVDDML--DTNIDVINSTKN 1818
            +NE+DK VY        VI+CLYVDD+L   TN++VIN  K+
Sbjct: 965  VNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 1006



 Score = 30.8 bits (68), Expect(7) = 2e-99
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = +1

Query: 859  KNVDCVFV*GILSILLQIDFWLCVLIFSDIGVNIITESRDAEFFEHVYSKPVPH 1020
            K VDCVF+ G     +   F +      D+ V  I ESRDA FFE  +     H
Sbjct: 678  KTVDCVFL-GYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTH 730


>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  137 bits (345), Expect(7) = 2e-99
 Identities = 71/152 (46%), Positives = 97/152 (63%)
 Frame = +3

Query: 1071 ILKEDEVDVEPKRSKIIRLETSYETDFITCLA*SEPQTCKEALISTETPFW*EASFSEMD 1250
            ++ E++V   P+RSK  R   S+  DF   L    P++  EA  S +  +W EA  SEMD
Sbjct: 756  LVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 815

Query: 1251 SVRWNQTWELSSLPPGCKTMGCK*VFKRKR*VDETVEKY*AKLVAKGYKLKEGVDFLDSN 1430
            S+  N TWE++  P GCK +GCK VFK+K   D T+EKY A+LVAKGY  KEG DF D+ 
Sbjct: 816  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTY 875

Query: 1431 SIVTEITSVEILIVIAAIKNVEIHQMDVKTAF 1526
            S V  +T++ +L+ +AA   + +HQMDVKTAF
Sbjct: 876  SPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 907



 Score = 95.1 bits (235), Expect(7) = 2e-99
 Identities = 62/154 (40%), Positives = 89/154 (57%), Gaps = 20/154 (12%)
 Frame = +2

Query: 2228 GLYDANWIVDSEESKSTSGYGFTLTCGFVVGRFPNKHI-AQFIMESESIALDKA*EGAEC 2404
            G  D+NWI D +E K+TSGY FTL  G V  R   + I  +  ME+E  ALD A   AE 
Sbjct: 1147 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1206

Query: 2405 LR*FLEDIPLWHRPVPAISIHCVSQAIIVK-------------AKK*LISI------GVI 2527
            LR  L D+P+  +PVPAI ++C +Q +IVK              K+ L S+      GVI
Sbjct: 1207 LRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVI 1266

Query: 2528 SIDWIKSKENIAQSLTKGLYKEIVKNASRGLGLK 2629
            ++D+I++  N+A   TKGL + ++ NAS+ +GL+
Sbjct: 1267 TLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1300



 Score = 91.7 bits (226), Expect(7) = 2e-99
 Identities = 54/130 (41%), Positives = 77/130 (59%)
 Frame = +3

Query: 1815 KHALNENIDLKDLGPFDVILGMRIRR*SNIYKS*SFSLC*VVLKRYNQSDCKPACTSYDY 1994
            K  L++N D+KDLG  DVIL +++ R  N            +L R+   D KP+ T YD 
Sbjct: 1005 KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 1064

Query: 1995 SCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSKLSGYNCSPEQENSDALSRV 2174
            S SL+KNK    + LEYS++IG LM L +   PDI++ VSKLS +  +P  ++  AL RV
Sbjct: 1065 SLSLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1124

Query: 2175 LWYLKYSFDL 2204
            + YLK + +L
Sbjct: 1125 MRYLKGTVEL 1134



 Score = 54.3 bits (129), Expect(7) = 2e-99
 Identities = 22/51 (43%), Positives = 34/51 (66%)
 Frame = +2

Query: 710 YILNKVPF*ESDETPYGLWNGR*PSYECVKVWGRLTKIVIPLPKRTRLKPK 862
           ++LN+VP    D+TPY +W GR PS   ++ WG L K+ +P+ K+ +L PK
Sbjct: 628 HVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPK 678



 Score = 51.2 bits (121), Expect(7) = 2e-99
 Identities = 27/57 (47%), Positives = 35/57 (61%)
 Frame = +2

Query: 1526 F*NRELGKEIYIDQPEDFVVKGCEYKVCNLKNLCMVFK*ARKQ*HGKFNHVIMDSGF 1696
            F N EL +EIY+DQP+ FV++G E KVC L       K A KQ H KF+  +  +GF
Sbjct: 907  FLNGELDEEIYMDQPDGFVLEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGF 963



 Score = 37.7 bits (86), Expect(7) = 2e-99
 Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
 Frame = +1

Query: 1699 INESDKYVYK*LVKDVCVIVCLYVDDML--DTNIDVINSTKN 1818
            +NE+DK VY        VI+CLYVDD+L   TN++VIN  K+
Sbjct: 965  VNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 1006



 Score = 30.8 bits (68), Expect(7) = 2e-99
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = +1

Query: 859  KNVDCVFV*GILSILLQIDFWLCVLIFSDIGVNIITESRDAEFFEHVYSKPVPH 1020
            K VDCVF+ G     +   F +      D+ V  I ESRDA FFE  +     H
Sbjct: 678  KTVDCVFL-GYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTH 730


>emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  137 bits (345), Expect(7) = 3e-99
 Identities = 71/152 (46%), Positives = 97/152 (63%)
 Frame = +3

Query: 1071 ILKEDEVDVEPKRSKIIRLETSYETDFITCLA*SEPQTCKEALISTETPFW*EASFSEMD 1250
            ++ E++V   P+RSK  R   S+  DF   L    P++  EA  S +  +W EA  SEMD
Sbjct: 756  LVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 815

Query: 1251 SVRWNQTWELSSLPPGCKTMGCK*VFKRKR*VDETVEKY*AKLVAKGYKLKEGVDFLDSN 1430
            S+  N TWE++  P GCK +GCK VFK+K   D T+EKY A+LVAKGY  KEG DF D+ 
Sbjct: 816  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTY 875

Query: 1431 SIVTEITSVEILIVIAAIKNVEIHQMDVKTAF 1526
            S V  +T++ +L+ +AA   + +HQMDVKTAF
Sbjct: 876  SPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 907



 Score = 95.5 bits (236), Expect(7) = 3e-99
 Identities = 63/156 (40%), Positives = 90/156 (57%), Gaps = 20/156 (12%)
 Frame = +2

Query: 2228 GLYDANWIVDSEESKSTSGYGFTLTCGFVVGRFPNKHI-AQFIMESESIALDKA*EGAEC 2404
            G  D+NWI D +E K+TSGY FTL  G V  R   + I  +  ME+E  ALD A   AE 
Sbjct: 1147 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1206

Query: 2405 LR*FLEDIPLWHRPVPAISIHCVSQAIIVK-------------AKK*LISI------GVI 2527
            LR  L D+P+  +PVPAI ++C +Q +IVK              K+ L S+      GVI
Sbjct: 1207 LRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVI 1266

Query: 2528 SIDWIKSKENIAQSLTKGLYKEIVKNASRGLGLKLI 2635
            ++D+I++  N+A   TKGL + ++ NAS+ +GL+ I
Sbjct: 1267 TLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPI 1302



 Score = 87.8 bits (216), Expect(7) = 3e-99
 Identities = 52/130 (40%), Positives = 75/130 (57%)
 Frame = +3

Query: 1815 KHALNENIDLKDLGPFDVILGMRIRR*SNIYKS*SFSLC*VVLKRYNQSDCKPACTSYDY 1994
            K  L++N D+KDLG  DVIL +++ R  N            +L R+   D KP+ T YD 
Sbjct: 1005 KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 1064

Query: 1995 SCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSKLSGYNCSPEQENSDALSRV 2174
            S  L+KNK    + LEYS++IG LM L +   PDI++ VSKLS +  +P  ++   L RV
Sbjct: 1065 SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRVLERV 1124

Query: 2175 LWYLKYSFDL 2204
            + YLK + +L
Sbjct: 1125 MRYLKGTVEL 1134



 Score = 56.2 bits (134), Expect(7) = 3e-99
 Identities = 23/51 (45%), Positives = 34/51 (66%)
 Frame = +2

Query: 710 YILNKVPF*ESDETPYGLWNGR*PSYECVKVWGRLTKIVIPLPKRTRLKPK 862
           Y+LN+VP    D+TPY +W GR PS   ++ WG L K+ +P+ K+ +L PK
Sbjct: 628 YVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPK 678



 Score = 52.4 bits (124), Expect(7) = 3e-99
 Identities = 28/57 (49%), Positives = 35/57 (61%)
 Frame = +2

Query: 1526 F*NRELGKEIYIDQPEDFVVKGCEYKVCNLKNLCMVFK*ARKQ*HGKFNHVIMDSGF 1696
            F N EL +EIY+DQP+ FVV+G E KVC L       K A KQ H KF+  +  +GF
Sbjct: 907  FLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGF 963



 Score = 37.7 bits (86), Expect(7) = 3e-99
 Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
 Frame = +1

Query: 1699 INESDKYVYK*LVKDVCVIVCLYVDDML--DTNIDVINSTKN 1818
            +NE+DK VY        VI+CLYVDD+L   TN++VIN  K+
Sbjct: 965  VNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 1006



 Score = 30.8 bits (68), Expect(7) = 3e-99
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = +1

Query: 859  KNVDCVFV*GILSILLQIDFWLCVLIFSDIGVNIITESRDAEFFEHVYSKPVPH 1020
            K VDCVF+ G     +   F +      D+ V  I ESRDA FFE  +     H
Sbjct: 678  KTVDCVFL-GYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTH 730


>emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  137 bits (345), Expect(7) = 4e-99
 Identities = 71/152 (46%), Positives = 97/152 (63%)
 Frame = +3

Query: 1071 ILKEDEVDVEPKRSKIIRLETSYETDFITCLA*SEPQTCKEALISTETPFW*EASFSEMD 1250
            ++ E++V   P+RSK  R   S+  DF   L    P++  EA  S +  +W EA  SEMD
Sbjct: 756  LVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 815

Query: 1251 SVRWNQTWELSSLPPGCKTMGCK*VFKRKR*VDETVEKY*AKLVAKGYKLKEGVDFLDSN 1430
            S+  N TWE++  P GCK +GCK VFK+K   D T+EKY A+LVAKGY  KEG DF D+ 
Sbjct: 816  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTY 875

Query: 1431 SIVTEITSVEILIVIAAIKNVEIHQMDVKTAF 1526
            S V  +T++ +L+ +AA   + +HQMDVKTAF
Sbjct: 876  SPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 907



 Score = 95.5 bits (236), Expect(7) = 4e-99
 Identities = 63/156 (40%), Positives = 90/156 (57%), Gaps = 20/156 (12%)
 Frame = +2

Query: 2228 GLYDANWIVDSEESKSTSGYGFTLTCGFVVGRFPNKHI-AQFIMESESIALDKA*EGAEC 2404
            G  D+NWI D +E K+TSGY FTL  G V  R   + I  +  ME+E  ALD A   AE 
Sbjct: 1147 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1206

Query: 2405 LR*FLEDIPLWHRPVPAISIHCVSQAIIVK-------------AKK*LISI------GVI 2527
            LR  L D+P+  +PVPAI ++C +Q +IVK              K+ L S+      GVI
Sbjct: 1207 LRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVI 1266

Query: 2528 SIDWIKSKENIAQSLTKGLYKEIVKNASRGLGLKLI 2635
            ++D+I++  N+A   TKGL + ++ NAS+ +GL+ I
Sbjct: 1267 TLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPI 1302



 Score = 89.4 bits (220), Expect(7) = 4e-99
 Identities = 53/130 (40%), Positives = 76/130 (58%)
 Frame = +3

Query: 1815 KHALNENIDLKDLGPFDVILGMRIRR*SNIYKS*SFSLC*VVLKRYNQSDCKPACTSYDY 1994
            K  L++N D+KDLG  DVIL +++ R  N            +L R+   D KP+ T YD 
Sbjct: 1005 KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 1064

Query: 1995 SCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSKLSGYNCSPEQENSDALSRV 2174
            S  L+KNK    + LEYS++IG LM L +   PDI++ VSKLS +  +P  ++  AL RV
Sbjct: 1065 SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1124

Query: 2175 LWYLKYSFDL 2204
            + YLK + +L
Sbjct: 1125 MRYLKGTVEL 1134



 Score = 54.3 bits (129), Expect(7) = 4e-99
 Identities = 22/51 (43%), Positives = 34/51 (66%)
 Frame = +2

Query: 710 YILNKVPF*ESDETPYGLWNGR*PSYECVKVWGRLTKIVIPLPKRTRLKPK 862
           ++LN+VP    D+TPY +W GR PS   ++ WG L K+ +P+ K+ +L PK
Sbjct: 628 HVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPK 678



 Score = 52.4 bits (124), Expect(7) = 4e-99
 Identities = 28/57 (49%), Positives = 35/57 (61%)
 Frame = +2

Query: 1526 F*NRELGKEIYIDQPEDFVVKGCEYKVCNLKNLCMVFK*ARKQ*HGKFNHVIMDSGF 1696
            F N EL +EIY+DQP+ FVV+G E KVC L       K A KQ H KF+  +  +GF
Sbjct: 907  FLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGF 963



 Score = 37.7 bits (86), Expect(7) = 4e-99
 Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
 Frame = +1

Query: 1699 INESDKYVYK*LVKDVCVIVCLYVDDML--DTNIDVINSTKN 1818
            +NE+DK VY        VI+CLYVDD+L   TN++VIN  K+
Sbjct: 965  VNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 1006



 Score = 30.8 bits (68), Expect(7) = 4e-99
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = +1

Query: 859  KNVDCVFV*GILSILLQIDFWLCVLIFSDIGVNIITESRDAEFFEHVYSKPVPH 1020
            K VDCVF+ G     +   F +      D+ V  I ESRDA FFE  +     H
Sbjct: 678  KTVDCVFL-GYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTH 730


>gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1095

 Score =  137 bits (345), Expect(7) = 4e-99
 Identities = 71/152 (46%), Positives = 97/152 (63%)
 Frame = +3

Query: 1071 ILKEDEVDVEPKRSKIIRLETSYETDFITCLA*SEPQTCKEALISTETPFW*EASFSEMD 1250
            ++ E++V   P+RSK  R   S+  DF   L    P++  EA  S +  +W EA  SEMD
Sbjct: 549  LVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 608

Query: 1251 SVRWNQTWELSSLPPGCKTMGCK*VFKRKR*VDETVEKY*AKLVAKGYKLKEGVDFLDSN 1430
            S+  N TWE++  P GCK +GCK VFK+K   D T+EKY A+LVAKGY  KEG DF D+ 
Sbjct: 609  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTY 668

Query: 1431 SIVTEITSVEILIVIAAIKNVEIHQMDVKTAF 1526
            S V  +T++ +L+ +AA   + +HQMDVKTAF
Sbjct: 669  SPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 700



 Score = 95.5 bits (236), Expect(7) = 4e-99
 Identities = 62/154 (40%), Positives = 89/154 (57%), Gaps = 20/154 (12%)
 Frame = +2

Query: 2228 GLYDANWIVDSEESKSTSGYGFTLTCGFVVGRFPNKHI-AQFIMESESIALDKA*EGAEC 2404
            G  D+NWI D +E K+TSGY FTL  G V  R   + I  +  ME+E  ALD A   AE 
Sbjct: 940  GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 999

Query: 2405 LR*FLEDIPLWHRPVPAISIHCVSQAIIVK-------------AKK*LISI------GVI 2527
            LR  L D+P+  +PVPAI ++C +Q +IVK              K+ L S+      GVI
Sbjct: 1000 LRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVI 1059

Query: 2528 SIDWIKSKENIAQSLTKGLYKEIVKNASRGLGLK 2629
            ++D+I++  N+A   TKGL + ++ NAS+ +GL+
Sbjct: 1060 TLDYIQTARNLADPFTKGLSRNVINNASKEMGLR 1093



 Score = 89.4 bits (220), Expect(7) = 4e-99
 Identities = 53/130 (40%), Positives = 76/130 (58%)
 Frame = +3

Query: 1815 KHALNENIDLKDLGPFDVILGMRIRR*SNIYKS*SFSLC*VVLKRYNQSDCKPACTSYDY 1994
            K  L++N D+KDLG  DVIL +++ R  N            +L R+   D KP+ T YD 
Sbjct: 798  KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 857

Query: 1995 SCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSKLSGYNCSPEQENSDALSRV 2174
            S  L+KNK    + LEYS++IG LM L +   PDI++ VSKLS +  +P  ++  AL RV
Sbjct: 858  SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 917

Query: 2175 LWYLKYSFDL 2204
            + YLK + +L
Sbjct: 918  MRYLKGTVEL 927



 Score = 54.3 bits (129), Expect(7) = 4e-99
 Identities = 22/51 (43%), Positives = 34/51 (66%)
 Frame = +2

Query: 710 YILNKVPF*ESDETPYGLWNGR*PSYECVKVWGRLTKIVIPLPKRTRLKPK 862
           ++LN+VP    D+TPY +W GR PS   ++ WG L K+ +P+ K+ +L PK
Sbjct: 421 HVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPK 471



 Score = 52.4 bits (124), Expect(7) = 4e-99
 Identities = 28/57 (49%), Positives = 35/57 (61%)
 Frame = +2

Query: 1526 F*NRELGKEIYIDQPEDFVVKGCEYKVCNLKNLCMVFK*ARKQ*HGKFNHVIMDSGF 1696
            F N EL +EIY+DQP+ FVV+G E KVC L       K A KQ H KF+  +  +GF
Sbjct: 700  FLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGF 756



 Score = 37.7 bits (86), Expect(7) = 4e-99
 Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
 Frame = +1

Query: 1699 INESDKYVYK*LVKDVCVIVCLYVDDML--DTNIDVINSTKN 1818
            +NE+DK VY        VI+CLYVDD+L   TN++VIN  K+
Sbjct: 758  VNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 799



 Score = 30.8 bits (68), Expect(7) = 4e-99
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = +1

Query: 859  KNVDCVFV*GILSILLQIDFWLCVLIFSDIGVNIITESRDAEFFEHVYSKPVPH 1020
            K VDCVF+ G     +   F +      D+ V  I ESRDA FFE  +     H
Sbjct: 471  KTVDCVFL-GYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTH 523


>gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2027

 Score =  137 bits (345), Expect(7) = 5e-99
 Identities = 71/152 (46%), Positives = 97/152 (63%)
 Frame = +3

Query: 1071 ILKEDEVDVEPKRSKIIRLETSYETDFITCLA*SEPQTCKEALISTETPFW*EASFSEMD 1250
            ++ E++V   P+RSK  R   S+  DF   L    P++  EA  S +  +W EA  SEMD
Sbjct: 951  LVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 1010

Query: 1251 SVRWNQTWELSSLPPGCKTMGCK*VFKRKR*VDETVEKY*AKLVAKGYKLKEGVDFLDSN 1430
            S+  N TWE++  P GCK +GCK VFK+K   D T+EKY A+LVAKGY  KEG DF D+ 
Sbjct: 1011 SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTY 1070

Query: 1431 SIVTEITSVEILIVIAAIKNVEIHQMDVKTAF 1526
            S V  +T++ +L+ +AA   + +HQMDVKTAF
Sbjct: 1071 SPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 1102



 Score = 95.1 bits (235), Expect(7) = 5e-99
 Identities = 62/154 (40%), Positives = 89/154 (57%), Gaps = 20/154 (12%)
 Frame = +2

Query: 2228 GLYDANWIVDSEESKSTSGYGFTLTCGFVVGRFPNKHI-AQFIMESESIALDKA*EGAEC 2404
            G  D+NWI D +E K+TSGY FTL  G V  R   + I  +  ME+E  ALD A   AE 
Sbjct: 1342 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1401

Query: 2405 LR*FLEDIPLWHRPVPAISIHCVSQAIIVK-------------AKK*LISI------GVI 2527
            LR  L D+P+  +PVPAI ++C +Q +IVK              K+ L S+      GVI
Sbjct: 1402 LRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVI 1461

Query: 2528 SIDWIKSKENIAQSLTKGLYKEIVKNASRGLGLK 2629
            ++D+I++  N+A   TKGL + ++ NAS+ +GL+
Sbjct: 1462 TLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1495



 Score = 89.4 bits (220), Expect(7) = 5e-99
 Identities = 53/130 (40%), Positives = 76/130 (58%)
 Frame = +3

Query: 1815 KHALNENIDLKDLGPFDVILGMRIRR*SNIYKS*SFSLC*VVLKRYNQSDCKPACTSYDY 1994
            K  L++N D+KDLG  DVIL +++ R  N            +L R+   D KP+ T YD 
Sbjct: 1200 KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 1259

Query: 1995 SCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSKLSGYNCSPEQENSDALSRV 2174
            S  L+KNK    + LEYS++IG LM L +   PDI++ VSKLS +  +P  ++  AL RV
Sbjct: 1260 SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1319

Query: 2175 LWYLKYSFDL 2204
            + YLK + +L
Sbjct: 1320 MRYLKDTVEL 1329



 Score = 54.3 bits (129), Expect(7) = 5e-99
 Identities = 22/51 (43%), Positives = 34/51 (66%)
 Frame = +2

Query: 710 YILNKVPF*ESDETPYGLWNGR*PSYECVKVWGRLTKIVIPLPKRTRLKPK 862
           ++LN+VP    D+TPY +W GR PS   ++ WG L K+ +P+ K+ +L PK
Sbjct: 823 HVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPK 873



 Score = 52.4 bits (124), Expect(7) = 5e-99
 Identities = 28/57 (49%), Positives = 35/57 (61%)
 Frame = +2

Query: 1526 F*NRELGKEIYIDQPEDFVVKGCEYKVCNLKNLCMVFK*ARKQ*HGKFNHVIMDSGF 1696
            F N EL +EIY+DQP+ FVV+G E KVC L       K A KQ H KF+  +  +GF
Sbjct: 1102 FLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGF 1158



 Score = 37.7 bits (86), Expect(7) = 5e-99
 Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
 Frame = +1

Query: 1699 INESDKYVYK*LVKDVCVIVCLYVDDML--DTNIDVINSTKN 1818
            +NE+DK VY        VI+CLYVDD+L   TN++VIN  K+
Sbjct: 1160 VNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 1201



 Score = 30.8 bits (68), Expect(7) = 5e-99
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = +1

Query: 859  KNVDCVFV*GILSILLQIDFWLCVLIFSDIGVNIITESRDAEFFEHVYSKPVPH 1020
            K VDCVF+ G     +   F +      D+ V  I ESRDA FFE  +     H
Sbjct: 873  KTVDCVFL-GYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTH 925



 Score = 50.1 bits (118), Expect(2) = 2e-06
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
 Frame = +1

Query: 256 VLRGRLGTVNL*VNA*LASIGFVPKFSLDFEHKSEICEESKYAIKSFSTNVQSNSKPLEL 435
           V   RL  +N  + + L+S+  +PKFS+    K   C +SK   K      + N  PLEL
Sbjct: 628 VWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLEL 687

Query: 436 IQLGLVDMSSTQNHCGKRW-L*LP*MIVRGTILYTCLG*G*RLRSLKMYKLEVGNQLE 606
           +   L +M+    +CGKR+ + L     R   +Y        L   K+YK EV NQL+
Sbjct: 688 LHSDLCEMNGVLTNCGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLD 745



 Score = 32.7 bits (73), Expect(2) = 2e-06
 Identities = 17/33 (51%), Positives = 23/33 (69%)
 Frame = +2

Query: 47  HVPSICENLVSCSVVDGKIFKILIESGKLVVTR 145
           HVPSI  NLVS S +    FK++ ES K+VV++
Sbjct: 556 HVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSK 588


>gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1391

 Score =  137 bits (345), Expect(7) = 6e-99
 Identities = 71/152 (46%), Positives = 97/152 (63%)
 Frame = +3

Query: 1071 ILKEDEVDVEPKRSKIIRLETSYETDFITCLA*SEPQTCKEALISTETPFW*EASFSEMD 1250
            ++ E++V   P+RSK  R   S+  DF   L    P++  EA  S +  +W EA  SEMD
Sbjct: 845  LVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 904

Query: 1251 SVRWNQTWELSSLPPGCKTMGCK*VFKRKR*VDETVEKY*AKLVAKGYKLKEGVDFLDSN 1430
            S+  N TWE++  P GCK +GCK VFK+K   D T+EKY A+LVAKGY  KEG DF D+ 
Sbjct: 905  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTY 964

Query: 1431 SIVTEITSVEILIVIAAIKNVEIHQMDVKTAF 1526
            S V  +T++ +L+ +AA   + +HQMDVKTAF
Sbjct: 965  SPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 996



 Score = 95.1 bits (235), Expect(7) = 6e-99
 Identities = 62/154 (40%), Positives = 89/154 (57%), Gaps = 20/154 (12%)
 Frame = +2

Query: 2228 GLYDANWIVDSEESKSTSGYGFTLTCGFVVGRFPNKHI-AQFIMESESIALDKA*EGAEC 2404
            G  D+NWI D +E K+TSGY FTL  G V  R   + I  +  ME+E  ALD A   AE 
Sbjct: 1236 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1295

Query: 2405 LR*FLEDIPLWHRPVPAISIHCVSQAIIVK-------------AKK*LISI------GVI 2527
            LR  L D+P+  +PVPAI ++C +Q +IVK              K+ L S+      GVI
Sbjct: 1296 LRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVI 1355

Query: 2528 SIDWIKSKENIAQSLTKGLYKEIVKNASRGLGLK 2629
            ++D+I++  N+A   TKGL + ++ NAS+ +GL+
Sbjct: 1356 TLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1389



 Score = 89.4 bits (220), Expect(7) = 6e-99
 Identities = 53/130 (40%), Positives = 76/130 (58%)
 Frame = +3

Query: 1815 KHALNENIDLKDLGPFDVILGMRIRR*SNIYKS*SFSLC*VVLKRYNQSDCKPACTSYDY 1994
            K  L++N D+KDLG  DVIL +++ R  N            +L R+   D KP+ T YD 
Sbjct: 1094 KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 1153

Query: 1995 SCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSKLSGYNCSPEQENSDALSRV 2174
            S  L+KNK    + LEYS++IG LM L +   PDI++ VSKLS +  +P  ++  AL RV
Sbjct: 1154 SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1213

Query: 2175 LWYLKYSFDL 2204
            + YLK + +L
Sbjct: 1214 MRYLKGTVEL 1223



 Score = 53.9 bits (128), Expect(7) = 6e-99
 Identities = 21/51 (41%), Positives = 34/51 (66%)
 Frame = +2

Query: 710 YILNKVPF*ESDETPYGLWNGR*PSYECVKVWGRLTKIVIPLPKRTRLKPK 862
           ++LN++P    D+TPY +W GR PS   ++ WG L K+ +P+ K+ +L PK
Sbjct: 717 HVLNRIPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPK 767



 Score = 52.4 bits (124), Expect(7) = 6e-99
 Identities = 28/57 (49%), Positives = 35/57 (61%)
 Frame = +2

Query: 1526 F*NRELGKEIYIDQPEDFVVKGCEYKVCNLKNLCMVFK*ARKQ*HGKFNHVIMDSGF 1696
            F N EL +EIY+DQP+ FVV+G E KVC L       K A KQ H KF+  +  +GF
Sbjct: 996  FLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGF 1052



 Score = 37.7 bits (86), Expect(7) = 6e-99
 Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
 Frame = +1

Query: 1699 INESDKYVYK*LVKDVCVIVCLYVDDML--DTNIDVINSTKN 1818
            +NE+DK VY        VI+CLYVDD+L   TN++VIN  K+
Sbjct: 1054 VNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 1095



 Score = 30.8 bits (68), Expect(7) = 6e-99
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = +1

Query: 859  KNVDCVFV*GILSILLQIDFWLCVLIFSDIGVNIITESRDAEFFEHVYSKPVPH 1020
            K VDCVF+ G     +   F +      D+ V  I ESRDA FFE  +     H
Sbjct: 767  KTVDCVFL-GYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTH 819


>gb|ABF96953.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1197

 Score =  136 bits (342), Expect(7) = 8e-99
 Identities = 70/152 (46%), Positives = 97/152 (63%)
 Frame = +3

Query: 1071 ILKEDEVDVEPKRSKIIRLETSYETDFITCLA*SEPQTCKEALISTETPFW*EASFSEMD 1250
            ++ E++V   P++SK  R   S+  DF   L    P++  EA  S +  +W EA  SEMD
Sbjct: 651  LVSEEDVSEAPRKSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 710

Query: 1251 SVRWNQTWELSSLPPGCKTMGCK*VFKRKR*VDETVEKY*AKLVAKGYKLKEGVDFLDSN 1430
            S+  N TWE++  P GCK +GCK VFK+K   D T+EKY A+LVAKGY  KEG DF D+ 
Sbjct: 711  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTY 770

Query: 1431 SIVTEITSVEILIVIAAIKNVEIHQMDVKTAF 1526
            S V  +T++ +L+ +AA   + +HQMDVKTAF
Sbjct: 771  SPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 802



 Score = 94.4 bits (233), Expect(7) = 8e-99
 Identities = 62/154 (40%), Positives = 88/154 (57%), Gaps = 20/154 (12%)
 Frame = +2

Query: 2228 GLYDANWIVDSEESKSTSGYGFTLTCGFVVGRFPNKHI-AQFIMESESIALDKA*EGAEC 2404
            G  D+NWI D +E K+TSGY FTL  G V  R   + I  +  ME E  ALD A   AE 
Sbjct: 1042 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEVELTALDTATVEAEW 1101

Query: 2405 LR*FLEDIPLWHRPVPAISIHCVSQAIIVK-------------AKK*LISI------GVI 2527
            LR  L D+P+  +PVPAI ++C +Q +IVK              K+ L S+      GVI
Sbjct: 1102 LRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVI 1161

Query: 2528 SIDWIKSKENIAQSLTKGLYKEIVKNASRGLGLK 2629
            ++D+I++  N+A   TKGL + ++ NAS+ +GL+
Sbjct: 1162 TLDYIQTARNLADPFTKGLSRNVINNASKEMGLR 1195



 Score = 91.3 bits (225), Expect(7) = 8e-99
 Identities = 53/130 (40%), Positives = 77/130 (59%)
 Frame = +3

Query: 1815 KHALNENIDLKDLGPFDVILGMRIRR*SNIYKS*SFSLC*VVLKRYNQSDCKPACTSYDY 1994
            K  L++N D+KDLG  DVIL +++ R  N            +L R+   D KP+ T YD 
Sbjct: 900  KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 959

Query: 1995 SCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSKLSGYNCSPEQENSDALSRV 2174
            S  L+KNK    + LEYS++IG LM L +   PDI+++VSKLS +  +P  ++  AL RV
Sbjct: 960  SLLLRKNKRIAGNQLEYSQIIGSLMYLASATRPDISFVVSKLSRFTSNPGDDHWRALERV 1019

Query: 2175 LWYLKYSFDL 2204
            + YLK + +L
Sbjct: 1020 MCYLKGTVEL 1029



 Score = 54.3 bits (129), Expect(7) = 8e-99
 Identities = 22/51 (43%), Positives = 34/51 (66%)
 Frame = +2

Query: 710 YILNKVPF*ESDETPYGLWNGR*PSYECVKVWGRLTKIVIPLPKRTRLKPK 862
           ++LN+VP    D+TPY +W GR PS   ++ WG L K+ +P+ K+ +L PK
Sbjct: 523 HVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPK 573



 Score = 51.6 bits (122), Expect(7) = 8e-99
 Identities = 28/57 (49%), Positives = 34/57 (59%)
 Frame = +2

Query: 1526 F*NRELGKEIYIDQPEDFVVKGCEYKVCNLKNLCMVFK*ARKQ*HGKFNHVIMDSGF 1696
            F N EL +EIY+DQP+ FVV+G E KVC L       K A KQ H KF+     +GF
Sbjct: 802  FLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTFTSAGF 858



 Score = 37.7 bits (86), Expect(7) = 8e-99
 Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
 Frame = +1

Query: 1699 INESDKYVYK*LVKDVCVIVCLYVDDML--DTNIDVINSTKN 1818
            +NE+DK VY        VI+CLYVDD+L   TN++VIN  K+
Sbjct: 860  VNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 901



 Score = 30.8 bits (68), Expect(7) = 8e-99
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = +1

Query: 859  KNVDCVFV*GILSILLQIDFWLCVLIFSDIGVNIITESRDAEFFEHVYSKPVPH 1020
            K VDCVF+ G     +   F +      D+ V  I ESRDA FFE  +     H
Sbjct: 573  KTVDCVFL-GYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTH 625


>gb|AAS01934.1| putative Integrase core domain containing protein [Oryza sativa
            Japonica Group]
          Length = 1180

 Score =  136 bits (342), Expect(7) = 8e-99
 Identities = 70/152 (46%), Positives = 97/152 (63%)
 Frame = +3

Query: 1071 ILKEDEVDVEPKRSKIIRLETSYETDFITCLA*SEPQTCKEALISTETPFW*EASFSEMD 1250
            ++ E++V   P++SK  R   S+  DF   L    P++  EA  S +  +W EA  SEMD
Sbjct: 634  LVSEEDVSEAPRKSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 693

Query: 1251 SVRWNQTWELSSLPPGCKTMGCK*VFKRKR*VDETVEKY*AKLVAKGYKLKEGVDFLDSN 1430
            S+  N TWE++  P GCK +GCK VFK+K   D T+EKY A+LVAKGY  KEG DF D+ 
Sbjct: 694  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTY 753

Query: 1431 SIVTEITSVEILIVIAAIKNVEIHQMDVKTAF 1526
            S V  +T++ +L+ +AA   + +HQMDVKTAF
Sbjct: 754  SPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 785



 Score = 94.4 bits (233), Expect(7) = 8e-99
 Identities = 62/154 (40%), Positives = 88/154 (57%), Gaps = 20/154 (12%)
 Frame = +2

Query: 2228 GLYDANWIVDSEESKSTSGYGFTLTCGFVVGRFPNKHI-AQFIMESESIALDKA*EGAEC 2404
            G  D+NWI D +E K+TSGY FTL  G V  R   + I  +  ME E  ALD A   AE 
Sbjct: 1025 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEVELTALDTATVEAEW 1084

Query: 2405 LR*FLEDIPLWHRPVPAISIHCVSQAIIVK-------------AKK*LISI------GVI 2527
            LR  L D+P+  +PVPAI ++C +Q +IVK              K+ L S+      GVI
Sbjct: 1085 LRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVI 1144

Query: 2528 SIDWIKSKENIAQSLTKGLYKEIVKNASRGLGLK 2629
            ++D+I++  N+A   TKGL + ++ NAS+ +GL+
Sbjct: 1145 TLDYIQTARNLADPFTKGLSRNVINNASKEMGLR 1178



 Score = 91.3 bits (225), Expect(7) = 8e-99
 Identities = 53/130 (40%), Positives = 77/130 (59%)
 Frame = +3

Query: 1815 KHALNENIDLKDLGPFDVILGMRIRR*SNIYKS*SFSLC*VVLKRYNQSDCKPACTSYDY 1994
            K  L++N D+KDLG  DVIL +++ R  N            +L R+   D KP+ T YD 
Sbjct: 883  KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 942

Query: 1995 SCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSKLSGYNCSPEQENSDALSRV 2174
            S  L+KNK    + LEYS++IG LM L +   PDI+++VSKLS +  +P  ++  AL RV
Sbjct: 943  SLLLRKNKRIAGNQLEYSQIIGSLMYLASATRPDISFVVSKLSRFTSNPGDDHWRALERV 1002

Query: 2175 LWYLKYSFDL 2204
            + YLK + +L
Sbjct: 1003 MCYLKGTVEL 1012



 Score = 54.3 bits (129), Expect(7) = 8e-99
 Identities = 22/51 (43%), Positives = 34/51 (66%)
 Frame = +2

Query: 710 YILNKVPF*ESDETPYGLWNGR*PSYECVKVWGRLTKIVIPLPKRTRLKPK 862
           ++LN+VP    D+TPY +W GR PS   ++ WG L K+ +P+ K+ +L PK
Sbjct: 506 HVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPK 556



 Score = 51.6 bits (122), Expect(7) = 8e-99
 Identities = 28/57 (49%), Positives = 34/57 (59%)
 Frame = +2

Query: 1526 F*NRELGKEIYIDQPEDFVVKGCEYKVCNLKNLCMVFK*ARKQ*HGKFNHVIMDSGF 1696
            F N EL +EIY+DQP+ FVV+G E KVC L       K A KQ H KF+     +GF
Sbjct: 785  FLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTFTSAGF 841



 Score = 37.7 bits (86), Expect(7) = 8e-99
 Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
 Frame = +1

Query: 1699 INESDKYVYK*LVKDVCVIVCLYVDDML--DTNIDVINSTKN 1818
            +NE+DK VY        VI+CLYVDD+L   TN++VIN  K+
Sbjct: 843  VNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 884



 Score = 30.8 bits (68), Expect(7) = 8e-99
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = +1

Query: 859  KNVDCVFV*GILSILLQIDFWLCVLIFSDIGVNIITESRDAEFFEHVYSKPVPH 1020
            K VDCVF+ G     +   F +      D+ V  I ESRDA FFE  +     H
Sbjct: 556  KTVDCVFL-GYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTH 608


>gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1518

 Score =  137 bits (345), Expect(7) = 2e-98
 Identities = 71/152 (46%), Positives = 97/152 (63%)
 Frame = +3

Query: 1071 ILKEDEVDVEPKRSKIIRLETSYETDFITCLA*SEPQTCKEALISTETPFW*EASFSEMD 1250
            ++ E++V   P+RSK  R   S+  DF   L    P++  EA  S +  +W EA  SEMD
Sbjct: 972  LVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 1031

Query: 1251 SVRWNQTWELSSLPPGCKTMGCK*VFKRKR*VDETVEKY*AKLVAKGYKLKEGVDFLDSN 1430
            S+  N TWE++  P GCK +GCK VFK+K   D T+EKY A+LVAKGY  KEG DF D+ 
Sbjct: 1032 SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTY 1091

Query: 1431 SIVTEITSVEILIVIAAIKNVEIHQMDVKTAF 1526
            S V  +T++ +L+ +AA   + +HQMDVKTAF
Sbjct: 1092 SPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 1123



 Score = 95.1 bits (235), Expect(7) = 2e-98
 Identities = 62/154 (40%), Positives = 89/154 (57%), Gaps = 20/154 (12%)
 Frame = +2

Query: 2228 GLYDANWIVDSEESKSTSGYGFTLTCGFVVGRFPNKHI-AQFIMESESIALDKA*EGAEC 2404
            G  D+NWI D +E K+TSGY FTL  G V  R   + I  +  ME+E  ALD A   AE 
Sbjct: 1363 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1422

Query: 2405 LR*FLEDIPLWHRPVPAISIHCVSQAIIVK-------------AKK*LISI------GVI 2527
            LR  L D+P+  +PVPAI ++C +Q +IVK              K+ L S+      GVI
Sbjct: 1423 LRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVI 1482

Query: 2528 SIDWIKSKENIAQSLTKGLYKEIVKNASRGLGLK 2629
            ++D+I++  N+A   TKGL + ++ NAS+ +GL+
Sbjct: 1483 TLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1516



 Score = 89.4 bits (220), Expect(7) = 2e-98
 Identities = 53/130 (40%), Positives = 76/130 (58%)
 Frame = +3

Query: 1815 KHALNENIDLKDLGPFDVILGMRIRR*SNIYKS*SFSLC*VVLKRYNQSDCKPACTSYDY 1994
            K  L++N D+KDLG  DVIL +++ R  N            +L R+   D KP+ T YD 
Sbjct: 1221 KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 1280

Query: 1995 SCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSKLSGYNCSPEQENSDALSRV 2174
            S  L+KNK    + LEYS++IG LM L +   PDI++ VSKLS +  +P  ++  AL RV
Sbjct: 1281 SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1340

Query: 2175 LWYLKYSFDL 2204
            + YLK + +L
Sbjct: 1341 MRYLKGTVEL 1350



 Score = 52.4 bits (124), Expect(7) = 2e-98
 Identities = 28/57 (49%), Positives = 35/57 (61%)
 Frame = +2

Query: 1526 F*NRELGKEIYIDQPEDFVVKGCEYKVCNLKNLCMVFK*ARKQ*HGKFNHVIMDSGF 1696
            F N EL +EIY+DQP+ FVV+G E KVC L       K A KQ H KF+  +  +GF
Sbjct: 1123 FLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGF 1179



 Score = 52.0 bits (123), Expect(7) = 2e-98
 Identities = 21/51 (41%), Positives = 33/51 (64%)
 Frame = +2

Query: 710 YILNKVPF*ESDETPYGLWNGR*PSYECVKVWGRLTKIVIPLPKRTRLKPK 862
           ++LN+VP    D+TPY +W GR P    ++ WG L K+ +P+ K+ +L PK
Sbjct: 844 HVLNRVPNRNKDKTPYEIWIGRKPLLSYLRTWGCLAKVNVPITKKRKLGPK 894



 Score = 37.7 bits (86), Expect(7) = 2e-98
 Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
 Frame = +1

Query: 1699 INESDKYVYK*LVKDVCVIVCLYVDDML--DTNIDVINSTKN 1818
            +NE+DK VY        VI+CLYVDD+L   TN++VIN  K+
Sbjct: 1181 VNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 1222



 Score = 30.8 bits (68), Expect(7) = 2e-98
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = +1

Query: 859  KNVDCVFV*GILSILLQIDFWLCVLIFSDIGVNIITESRDAEFFEHVYSKPVPH 1020
            K VDCVF+ G     +   F +      D+ V  I ESRDA FFE  +     H
Sbjct: 894  KTVDCVFL-GYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTH 946


>gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1302

 Score =  137 bits (345), Expect(7) = 2e-98
 Identities = 71/152 (46%), Positives = 97/152 (63%)
 Frame = +3

Query: 1071 ILKEDEVDVEPKRSKIIRLETSYETDFITCLA*SEPQTCKEALISTETPFW*EASFSEMD 1250
            ++ E++V   P+RSK  R   S+  DF   L    P++  EA  S +  +W EA  SEMD
Sbjct: 756  LVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 815

Query: 1251 SVRWNQTWELSSLPPGCKTMGCK*VFKRKR*VDETVEKY*AKLVAKGYKLKEGVDFLDSN 1430
            S+  N TWE++  P GCK +GCK VFK+K   D T+EKY A+LVAKGY  KEG DF D+ 
Sbjct: 816  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTY 875

Query: 1431 SIVTEITSVEILIVIAAIKNVEIHQMDVKTAF 1526
            S V  +T++ +L+ +AA   + +HQMDVKTAF
Sbjct: 876  SPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 907



 Score = 95.1 bits (235), Expect(7) = 2e-98
 Identities = 62/154 (40%), Positives = 89/154 (57%), Gaps = 20/154 (12%)
 Frame = +2

Query: 2228 GLYDANWIVDSEESKSTSGYGFTLTCGFVVGRFPNKHI-AQFIMESESIALDKA*EGAEC 2404
            G  D+NWI D +E K+TSGY FTL  G V  R   + I  +  ME+E  ALD A   AE 
Sbjct: 1147 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1206

Query: 2405 LR*FLEDIPLWHRPVPAISIHCVSQAIIVK-------------AKK*LISI------GVI 2527
            LR  L D+P+  +PVPAI ++C +Q +IVK              K+ L S+      GVI
Sbjct: 1207 LRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVI 1266

Query: 2528 SIDWIKSKENIAQSLTKGLYKEIVKNASRGLGLK 2629
            ++D+I++  N+A   TKGL + ++ NAS+ +GL+
Sbjct: 1267 TLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1300



 Score = 89.4 bits (220), Expect(7) = 2e-98
 Identities = 53/130 (40%), Positives = 76/130 (58%)
 Frame = +3

Query: 1815 KHALNENIDLKDLGPFDVILGMRIRR*SNIYKS*SFSLC*VVLKRYNQSDCKPACTSYDY 1994
            K  L++N D+KDLG  DVIL +++ R  N            +L R+   D KP+ T YD 
Sbjct: 1005 KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 1064

Query: 1995 SCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSKLSGYNCSPEQENSDALSRV 2174
            S  L+KNK    + LEYS++IG LM L +   PDI++ VSKLS +  +P  ++  AL RV
Sbjct: 1065 SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1124

Query: 2175 LWYLKYSFDL 2204
            + YLK + +L
Sbjct: 1125 MRYLKGTVEL 1134



 Score = 52.4 bits (124), Expect(7) = 2e-98
 Identities = 28/57 (49%), Positives = 35/57 (61%)
 Frame = +2

Query: 1526 F*NRELGKEIYIDQPEDFVVKGCEYKVCNLKNLCMVFK*ARKQ*HGKFNHVIMDSGF 1696
            F N EL +EIY+DQP+ FVV+G E KVC L       K A KQ H KF+  +  +GF
Sbjct: 907  FLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGF 963



 Score = 52.0 bits (123), Expect(7) = 2e-98
 Identities = 21/51 (41%), Positives = 33/51 (64%)
 Frame = +2

Query: 710 YILNKVPF*ESDETPYGLWNGR*PSYECVKVWGRLTKIVIPLPKRTRLKPK 862
           ++LN+VP    D+TPY +W GR P    ++ WG L K+ +P+ K+ +L PK
Sbjct: 628 HVLNRVPNRNKDKTPYEIWIGRKPLLSYLRTWGCLAKVNVPITKKRKLGPK 678



 Score = 37.7 bits (86), Expect(7) = 2e-98
 Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
 Frame = +1

Query: 1699 INESDKYVYK*LVKDVCVIVCLYVDDML--DTNIDVINSTKN 1818
            +NE+DK VY        VI+CLYVDD+L   TN++VIN  K+
Sbjct: 965  VNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 1006



 Score = 30.8 bits (68), Expect(7) = 2e-98
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = +1

Query: 859  KNVDCVFV*GILSILLQIDFWLCVLIFSDIGVNIITESRDAEFFEHVYSKPVPH 1020
            K VDCVF+ G     +   F +      D+ V  I ESRDA FFE  +     H
Sbjct: 678  KTVDCVFL-GYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTH 730


>ref|XP_008387315.1| PREDICTED: uncharacterized protein LOC103449768 [Malus domestica]
          Length = 2699

 Score =  139 bits (351), Expect(5) = 4e-98
 Identities = 73/144 (50%), Positives = 102/144 (70%)
 Frame = +3

Query: 1095 VEPKRSKIIRLETSYETDFITCLA*SEPQTCKEALISTETPFW*EASFSEMDSVRWNQTW 1274
            V+ KR+K+ +   ++  DFI  L+ +EP+T KEA+ S+E P W EA  SE++S+  N TW
Sbjct: 2219 VKGKRTKVSK---NFAPDFIAYLSENEPRTFKEAMSSSEAPLWKEAIKSEIESIMENNTW 2275

Query: 1275 ELSSLPPGCKTMGCK*VFKRKR*VDETVEKY*AKLVAKGYKLKEGVDFLDSNSIVTEITS 1454
            EL  LP G K +G K +FK+K   D T++K+ A+LVAKGY+ KEG+D+ D+ S V+ ITS
Sbjct: 2276 ELVDLPLGSKPIGHKWIFKKKLKADGTIDKFKARLVAKGYRQKEGLDYFDTYSPVSRITS 2335

Query: 1455 VEILIVIAAIKNVEIHQMDVKTAF 1526
            +  LI IAA+ N +IHQMDVKTAF
Sbjct: 2336 IRTLIAIAAVYNFDIHQMDVKTAF 2359



 Score =  127 bits (319), Expect(5) = 4e-98
 Identities = 68/129 (52%), Positives = 86/129 (66%)
 Frame = +3

Query: 1815 KHALNENIDLKDLGPFDVILGMRIRR*SNIYKS*SFSLC*VVLKRYNQSDCKPACTSYDY 1994
            K  LN + D+KDLG  DVILG++I+R S  Y          +L+R+ Q DCKPA TS+D 
Sbjct: 2457 KKMLNSSFDMKDLGQADVILGIQIKRNSEGYVLTQSHYPEKILRRFGQFDCKPAATSFDA 2516

Query: 1995 SCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSKLSGYNCSPEQENSDALSRV 2174
             C L+KNKG  +S LEYS+VIG LM LMN   PD+AY VS+LS Y  +P QE+ DAL +V
Sbjct: 2517 GCKLEKNKGDAISQLEYSQVIGSLMYLMNSTRPDLAYAVSRLSRYTSNPAQEHWDALVQV 2576

Query: 2175 LWYLKYSFD 2201
            L YLK + D
Sbjct: 2577 LRYLKNTLD 2585



 Score = 79.0 bits (193), Expect(5) = 4e-98
 Identities = 48/92 (52%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
 Frame = +2

Query: 2228 GLYDANWIVDSEESKSTSGYGFTLTCGFVVGRFPN-KHIAQFIMESESIALDKA*EGAEC 2404
            G  DANWI D+ ESKSTSGY FTL    +  +    K IA+  ME E I LD A E AE 
Sbjct: 2599 GFSDANWISDTTESKSTSGYVFTLGGAAISWKSSKQKCIARSTMEFEFITLDLAGEEAEW 2658

Query: 2405 LR*FLEDIPLWHRPVPAISIHCVSQAIIVKAK 2500
            L+ F+EDIP+W + V AI IHC S A   +AK
Sbjct: 2659 LKNFVEDIPMWPKLVTAICIHCDSMAAQSRAK 2690



 Score = 58.5 bits (140), Expect(5) = 4e-98
 Identities = 30/59 (50%), Positives = 38/59 (64%)
 Frame = +2

Query: 1526 F*NRELGKEIYIDQPEDFVVKGCEYKVCNLKNLCMVFK*ARKQ*HGKFNHVIMDSGFKL 1702
            F N EL +EIY++QPE FV+KG E KVC L       K A KQ H KF+H ++  GFK+
Sbjct: 2359 FLNGELDEEIYMEQPEGFVLKGQESKVCKLVKSLYGLKQAPKQWHEKFDHTLLTYGFKI 2417



 Score = 48.5 bits (114), Expect(5) = 4e-98
 Identities = 28/43 (65%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
 Frame = +1

Query: 1699 INESDKYVYK*LVKDVCVIVCLYVDDML--DTNIDVINSTKNM 1821
            INESDK VY       CVIVCLYVDDML    N DVIN TK M
Sbjct: 2417 INESDKCVYIKSNDKTCVIVCLYVDDMLIMGINKDVINKTKKM 2459


>gb|AAO60021.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711758|gb|ABF99553.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1224

 Score =  135 bits (341), Expect(7) = 5e-98
 Identities = 70/152 (46%), Positives = 97/152 (63%)
 Frame = +3

Query: 1071 ILKEDEVDVEPKRSKIIRLETSYETDFITCLA*SEPQTCKEALISTETPFW*EASFSEMD 1250
            ++ E++V   P+RSK  R   S+  DF   L    P++  EA  S +  +W EA  SEMD
Sbjct: 678  LVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 737

Query: 1251 SVRWNQTWELSSLPPGCKTMGCK*VFKRKR*VDETVEKY*AKLVAKGYKLKEGVDFLDSN 1430
            S+  N TWE++  P GC+ +GCK VFK+K   D T+EKY A+LVAKGY  KEG DF D+ 
Sbjct: 738  SIIANGTWEVTERPYGCQPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTY 797

Query: 1431 SIVTEITSVEILIVIAAIKNVEIHQMDVKTAF 1526
            S V  +T++ +L+ +AA   + +HQMDVKTAF
Sbjct: 798  SPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 829



 Score = 91.7 bits (226), Expect(7) = 5e-98
 Identities = 60/154 (38%), Positives = 88/154 (57%), Gaps = 20/154 (12%)
 Frame = +2

Query: 2228 GLYDANWIVDSEESKSTSGYGFTLTCGFVVGRFPNKHI-AQFIMESESIALDKA*EGAEC 2404
            G  D+NWI D ++ K+TSGY FTL  G V  R   + I  +  ME+E  ALD A   AE 
Sbjct: 1069 GYSDSNWISDVDKIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1128

Query: 2405 LR*FLEDIPLWHRPVPAISIHCVSQAIIVK-------------AKK*LISI------GVI 2527
            LR  L D+P+  +PVPAI ++C +Q +IVK              K+ L S+      GVI
Sbjct: 1129 LRDLLMDLPVVEKPVPAILMNCDNQMVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVI 1188

Query: 2528 SIDWIKSKENIAQSLTKGLYKEIVKNASRGLGLK 2629
            ++D+I++  N+A   TKGL + ++ N S+ +GL+
Sbjct: 1189 TLDYIQTARNLADPFTKGLSRNVIDNVSKEMGLR 1222



 Score = 88.2 bits (217), Expect(7) = 5e-98
 Identities = 53/130 (40%), Positives = 75/130 (57%)
 Frame = +3

Query: 1815 KHALNENIDLKDLGPFDVILGMRIRR*SNIYKS*SFSLC*VVLKRYNQSDCKPACTSYDY 1994
            K  L++N D+KDLG  DVIL +++ R  N            +L R+   D KP+ T YD 
Sbjct: 927  KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 986

Query: 1995 SCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSKLSGYNCSPEQENSDALSRV 2174
            S  L KNK    + LEYS++IG LM L +   PDI++ VSKLS +  +P  ++  AL RV
Sbjct: 987  SLLLHKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1046

Query: 2175 LWYLKYSFDL 2204
            + YLK + +L
Sbjct: 1047 MRYLKGTVEL 1056



 Score = 54.3 bits (129), Expect(7) = 5e-98
 Identities = 22/51 (43%), Positives = 34/51 (66%)
 Frame = +2

Query: 710 YILNKVPF*ESDETPYGLWNGR*PSYECVKVWGRLTKIVIPLPKRTRLKPK 862
           ++LN+VP    D+TPY +W GR PS   ++ WG L K+ +P+ K+ +L PK
Sbjct: 550 HVLNRVPNRNKDKTPYKIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPK 600



 Score = 53.5 bits (127), Expect(7) = 5e-98
 Identities = 28/57 (49%), Positives = 36/57 (63%)
 Frame = +2

Query: 1526 F*NRELGKEIYIDQPEDFVVKGCEYKVCNLKNLCMVFK*ARKQ*HGKFNHVIMDSGF 1696
            F N EL +EIY+DQP+ FVV+G E KVC L       K A KQ H KF+ ++  +GF
Sbjct: 829  FLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKILTSAGF 885



 Score = 37.7 bits (86), Expect(7) = 5e-98
 Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
 Frame = +1

Query: 1699 INESDKYVYK*LVKDVCVIVCLYVDDML--DTNIDVINSTKN 1818
            +NE+DK VY        VI+CLYVDD+L   TN++VIN  K+
Sbjct: 887  VNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 928



 Score = 32.3 bits (72), Expect(7) = 5e-98
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = +1

Query: 859  KNVDCVFV*GILSILLQIDFWLCVLIFSDIGVNIITESRDAEFFEHVYSKPVPH 1020
            K VDCVF+ G    ++   F +      D+ V  I ESRDA FFE  +     H
Sbjct: 600  KTVDCVFL-GYAHHIIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTH 652


>gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  137 bits (345), Expect(7) = 6e-98
 Identities = 71/152 (46%), Positives = 97/152 (63%)
 Frame = +3

Query: 1071 ILKEDEVDVEPKRSKIIRLETSYETDFITCLA*SEPQTCKEALISTETPFW*EASFSEMD 1250
            ++ E++V   P+RSK  R   S+  DF   L    P++  EA  S +  +W EA  SEMD
Sbjct: 756  LVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 815

Query: 1251 SVRWNQTWELSSLPPGCKTMGCK*VFKRKR*VDETVEKY*AKLVAKGYKLKEGVDFLDSN 1430
            S+  N TWE++  P GCK +GCK VFK+K   D T+EKY A+LVAKGY  KEG DF D+ 
Sbjct: 816  SIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTY 875

Query: 1431 SIVTEITSVEILIVIAAIKNVEIHQMDVKTAF 1526
            S V  +T++ +L+ +AA   + +HQMDVKTAF
Sbjct: 876  SPVARLTTIRVLLSLAASHGLLVHQMDVKTAF 907



 Score = 91.3 bits (225), Expect(7) = 6e-98
 Identities = 61/154 (39%), Positives = 88/154 (57%), Gaps = 20/154 (12%)
 Frame = +2

Query: 2228 GLYDANWIVDSEESKSTSGYGFTLTCGFVVGRFPNKHI-AQFIMESESIALDKA*EGAEC 2404
            G  D+NWI D +E K+TSGY FTL  G V  R   + I  +  ME+E  ALD A   AE 
Sbjct: 1147 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1206

Query: 2405 LR*FLEDIPLWHRPVPAISIHCVSQAIIVKA-------------KK*LISI------GVI 2527
            LR  L D+P+  + VPAI ++C +Q +IVK              K+ L S+      GVI
Sbjct: 1207 LRDLLMDLPVVEKLVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVI 1266

Query: 2528 SIDWIKSKENIAQSLTKGLYKEIVKNASRGLGLK 2629
            ++D+I++  N+A   TKGL + ++ NAS+ +GL+
Sbjct: 1267 TLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1300



 Score = 89.4 bits (220), Expect(7) = 6e-98
 Identities = 53/130 (40%), Positives = 76/130 (58%)
 Frame = +3

Query: 1815 KHALNENIDLKDLGPFDVILGMRIRR*SNIYKS*SFSLC*VVLKRYNQSDCKPACTSYDY 1994
            K  L++N D+KDLG  DVIL +++ R  N            +L R+   D KP+ T YD 
Sbjct: 1005 KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 1064

Query: 1995 SCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSKLSGYNCSPEQENSDALSRV 2174
            S  L+KNK    + LEYS++IG LM L +   PDI++ VSKLS +  +P  ++  AL RV
Sbjct: 1065 SLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERV 1124

Query: 2175 LWYLKYSFDL 2204
            + YLK + +L
Sbjct: 1125 MRYLKGTVEL 1134



 Score = 53.9 bits (128), Expect(7) = 6e-98
 Identities = 22/51 (43%), Positives = 34/51 (66%)
 Frame = +2

Query: 710 YILNKVPF*ESDETPYGLWNGR*PSYECVKVWGRLTKIVIPLPKRTRLKPK 862
           ++LN+VP    D+TPY +W GR PS   ++ WG L K+ +P+ K+ +L PK
Sbjct: 628 HVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKHKLGPK 678



 Score = 52.4 bits (124), Expect(7) = 6e-98
 Identities = 28/57 (49%), Positives = 35/57 (61%)
 Frame = +2

Query: 1526 F*NRELGKEIYIDQPEDFVVKGCEYKVCNLKNLCMVFK*ARKQ*HGKFNHVIMDSGF 1696
            F N EL +EIY+DQP+ FVV+G E KVC L       K A KQ H KF+  +  +GF
Sbjct: 907  FLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGF 963



 Score = 37.7 bits (86), Expect(7) = 6e-98
 Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
 Frame = +1

Query: 1699 INESDKYVYK*LVKDVCVIVCLYVDDML--DTNIDVINSTKN 1818
            +NE+DK VY        VI+CLYVDD+L   TN++VIN  K+
Sbjct: 965  VNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 1006



 Score = 31.2 bits (69), Expect(7) = 6e-98
 Identities = 21/60 (35%), Positives = 28/60 (46%)
 Frame = +1

Query: 841  KN*IETKNVDCVFV*GILSILLQIDFWLCVLIFSDIGVNIITESRDAEFFEHVYSKPVPH 1020
            K+ +  K VDCVF+ G     +   F +      D+ V  I ESRDA FFE  +     H
Sbjct: 672  KHKLGPKTVDCVFL-GYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTH 730


>emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]
          Length = 1342

 Score =  134 bits (338), Expect(7) = 1e-97
 Identities = 69/152 (45%), Positives = 96/152 (63%)
 Frame = +3

Query: 1071 ILKEDEVDVEPKRSKIIRLETSYETDFITCLA*SEPQTCKEALISTETPFW*EASFSEMD 1250
            ++ E++V   P+RSK  R   S+  DF   L    P++  EA  S +  +W EA  SEMD
Sbjct: 756  LVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMD 815

Query: 1251 SVRWNQTWELSSLPPGCKTMGCK*VFKRKR*VDETVEKY*AKLVAKGYKLKEGVDFLDSN 1430
            S+  N  WE++  P GCK +GCK VFK+K   D T+EKY A+LVAKGY  KEG DF D+ 
Sbjct: 816  SIIANGIWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTY 875

Query: 1431 SIVTEITSVEILIVIAAIKNVEIHQMDVKTAF 1526
            S +  +T++ +L+ +AA   + +HQMDVKTAF
Sbjct: 876  SPIARLTTIRVLLSLAASHGLLVHQMDVKTAF 907



 Score = 95.5 bits (236), Expect(7) = 1e-97
 Identities = 63/156 (40%), Positives = 90/156 (57%), Gaps = 20/156 (12%)
 Frame = +2

Query: 2228 GLYDANWIVDSEESKSTSGYGFTLTCGFVVGRFPNKHI-AQFIMESESIALDKA*EGAEC 2404
            G  D+NWI D +E K+TSGY FTL  G V  R   + I  +  ME+E  ALD A   AE 
Sbjct: 1147 GYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEW 1206

Query: 2405 LR*FLEDIPLWHRPVPAISIHCVSQAIIVK-------------AKK*LISI------GVI 2527
            LR  L D+P+  +PVPAI ++C +Q +IVK              K+ L S+      GVI
Sbjct: 1207 LRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVI 1266

Query: 2528 SIDWIKSKENIAQSLTKGLYKEIVKNASRGLGLKLI 2635
            ++D+I++  N+A   TKGL + ++ NAS+ +GL+ I
Sbjct: 1267 TLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPI 1302



 Score = 87.0 bits (214), Expect(7) = 1e-97
 Identities = 51/130 (39%), Positives = 75/130 (57%)
 Frame = +3

Query: 1815 KHALNENIDLKDLGPFDVILGMRIRR*SNIYKS*SFSLC*VVLKRYNQSDCKPACTSYDY 1994
            K  L++N D+KDLG  DVIL +++ R  N            +L R+   D KP+ T YD 
Sbjct: 1005 KSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDP 1064

Query: 1995 SCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSKLSGYNCSPEQENSDALSRV 2174
            S  L+KN     + LEYS++IG LM L +   PDI++ VSKLS +  +P  ++  AL R+
Sbjct: 1065 SLLLRKNNRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERI 1124

Query: 2175 LWYLKYSFDL 2204
            + YLK + +L
Sbjct: 1125 MRYLKGTVEL 1134



 Score = 54.3 bits (129), Expect(7) = 1e-97
 Identities = 22/51 (43%), Positives = 34/51 (66%)
 Frame = +2

Query: 710 YILNKVPF*ESDETPYGLWNGR*PSYECVKVWGRLTKIVIPLPKRTRLKPK 862
           ++LN+VP    D+TPY +W GR PS   ++ WG L K+ +P+ K+ +L PK
Sbjct: 628 HVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPK 678



 Score = 52.4 bits (124), Expect(7) = 1e-97
 Identities = 28/57 (49%), Positives = 35/57 (61%)
 Frame = +2

Query: 1526 F*NRELGKEIYIDQPEDFVVKGCEYKVCNLKNLCMVFK*ARKQ*HGKFNHVIMDSGF 1696
            F N EL +EIY+DQP+ FVV+G E KVC L       K A KQ H KF+  +  +GF
Sbjct: 907  FLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGF 963



 Score = 37.7 bits (86), Expect(7) = 1e-97
 Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
 Frame = +1

Query: 1699 INESDKYVYK*LVKDVCVIVCLYVDDML--DTNIDVINSTKN 1818
            +NE+DK VY        VI+CLYVDD+L   TN++VIN  K+
Sbjct: 965  VNEADKCVYYRHGGGKGVILCLYVDDILIFGTNLEVINEVKS 1006



 Score = 30.4 bits (67), Expect(7) = 1e-97
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = +1

Query: 859  KNVDCVFV*GILSILLQIDFWLCVLIFSDIGVNIITESRDAEFFEHVYSKPVPH 1020
            K VDCVF+ G     +   F +      D+ V  I ESRDA FFE  +     H
Sbjct: 678  KTVDCVFL-GYAHHSIAYRFLIVKSEVLDMHVGTIMESRDATFFESFFPMKDTH 730