BLASTX nr result

ID: Papaver27_contig00056504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00056504
         (438 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006340928.1| PREDICTED: F-box/kelch-repeat protein At3g23...    59   5e-07
ref|XP_006370699.1| hypothetical protein POPTR_0001s45010g [Popu...    45   2e-06
ref|XP_006348865.1| PREDICTED: F-box protein At3g07870-like isof...    57   3e-06
ref|XP_006348862.1| PREDICTED: F-box protein At3g07870-like isof...    57   3e-06

>ref|XP_006340928.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum
           tuberosum]
          Length = 367

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/84 (39%), Positives = 48/84 (57%)
 Frame = -1

Query: 435 MDYFKFLPLEITLDILTRLPAESIMDCKSVSKSWTSAVGHPSFSKLRHLNHPADDKSADE 256
           M+   ++  EI +DIL+RLP +S+   K VSKSW + +  PSF K+ HLNH  +DK   E
Sbjct: 1   METHMYIQEEIIMDILSRLPVKSLFLFKCVSKSWKALICEPSFKKM-HLNHAKNDKLLIE 59

Query: 255 TREKDDNYPQFCESETCLVDLSSR 184
              +D N   +C S + +  L  R
Sbjct: 60  RTARDRNIFFYCSSLSSMSHLIVR 83


>ref|XP_006370699.1| hypothetical protein POPTR_0001s45010g [Populus trichocarpa]
           gi|550349905|gb|ERP67268.1| hypothetical protein
           POPTR_0001s45010g [Populus trichocarpa]
          Length = 766

 Score = 45.4 bits (106), Expect(2) = 2e-06
 Identities = 22/28 (78%), Positives = 22/28 (78%)
 Frame = -3

Query: 118 DCPDDEKSYIHRVGCTARNCAIGRSVLF 35
           DCPDD  SYIHRVG TAR  A GRSVLF
Sbjct: 391 DCPDDVASYIHRVGRTARYLAGGRSVLF 418



 Score = 31.6 bits (70), Expect(2) = 2e-06
 Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
 Frame = -1

Query: 234 YPQFCESETCL--VDLSSRGLDFKK 166
           Y QFCES + L   D++SRGLDF K
Sbjct: 358 YSQFCESHSVLFSTDVASRGLDFNK 382


>ref|XP_006348865.1| PREDICTED: F-box protein At3g07870-like isoform X4 [Solanum
           tuberosum]
          Length = 397

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
 Frame = -1

Query: 420 FLPLEITLDILTRLPAESIMDCKSVSKSWTSAVGHPSFSKLRHLNHPADD----KSADET 253
           +LP E+ LDI T+LP +SI+ C+SV KSW S +  PSF+   HLN   DD    ++  + 
Sbjct: 4   YLPEELLLDIFTKLPVKSILRCRSVCKSWYSLLTSPSFT-FTHLNRKRDDHMLIRNYAKN 62

Query: 252 REKDDNYPQFCESE 211
             + D YP F  +E
Sbjct: 63  TRRIDMYPLFGNNE 76


>ref|XP_006348862.1| PREDICTED: F-box protein At3g07870-like isoform X1 [Solanum
           tuberosum] gi|565364298|ref|XP_006348863.1| PREDICTED:
           F-box protein At3g07870-like isoform X2 [Solanum
           tuberosum] gi|565364300|ref|XP_006348864.1| PREDICTED:
           F-box protein At3g07870-like isoform X3 [Solanum
           tuberosum]
          Length = 464

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
 Frame = -1

Query: 420 FLPLEITLDILTRLPAESIMDCKSVSKSWTSAVGHPSFSKLRHLNHPADD----KSADET 253
           +LP E+ LDI T+LP +SI+ C+SV KSW S +  PSF+   HLN   DD    ++  + 
Sbjct: 4   YLPEELLLDIFTKLPVKSILRCRSVCKSWYSLLTSPSFT-FTHLNRKRDDHMLIRNYAKN 62

Query: 252 REKDDNYPQFCESE 211
             + D YP F  +E
Sbjct: 63  TRRIDMYPLFGNNE 76


Top