BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00056278
         (678 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-...    97   2e-31
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc...    97   2e-31
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...    97   2e-31
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...    99   2e-31
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  100   2e-31
gb|AAB82754.1| retrofit [Oryza longistaminata]                         99   4e-31
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p...   100   8e-31
gb|AAU90288.2| Polyprotein, putative [Solanum demissum]                94   8e-31
gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [...   102   4e-30
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g...    99   4e-30
gb|AAL31076.1|AC091749_5 putaive copia-like retrotransposon poly...   102   4e-30
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz...    99   5e-30
gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subc...    99   5e-30
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]                   97   7e-30
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc...   102   1e-29
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]    97   2e-29
ref|YP_514636.1| hypothetical protein OrsaiPp07 [Oryza sativa In...    99   2e-29
gb|ABA99232.1| retrotransposon protein, putative, Ty1-copia subc...    99   2e-29
emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]    86   2e-29
ref|XP_004986808.1| PREDICTED: uncharacterized protein LOC101773...   105   3e-29

>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1621

 Score = 97.4 bits (241), Expect(3) = 2e-31
 Identities = 55/126 (43%), Positives = 77/126 (61%), Gaps = 6/126 (4%)
 Frame = +1

Query: 175  FNQLDDVDFTEAFSLVVKASTVRTILTIALSRGSIVKQLDVSNTFLHAHLAEIVYMQHPS 354
            F Q   +D+ + FS VVKA+T+R IL++A+S+G  ++QLDV N FLH +L E VYM  P 
Sbjct: 736  FKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPP 795

Query: 355  GYEVPGKENYVCHLKRSLYG*KQAPRVGFKDLALFCSGLAF------SSLNMIIPFSLTN 516
            G+E P K ++VC L ++LYG KQAPR  F  L+     L F      +SL  +    +T 
Sbjct: 796  GFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTSLFFLNKGDITM 855

Query: 517  QQMVYV 534
              +VYV
Sbjct: 856  FVLVYV 861



 Score = 58.5 bits (140), Expect(3) = 2e-31
 Identities = 24/45 (53%), Positives = 34/45 (75%)
 Frame = +3

Query: 36  IQNGAWDMVPYGKSRNALGAKWVFKLKLMADGSIKRHKARLVAKG 170
           ++N  W +VP  + RN +G KWV+K+K  ADG++ R+KARLVAKG
Sbjct: 691 VKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKG 735



 Score = 27.3 bits (59), Expect(3) = 2e-31
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +2

Query: 629 KNLGNLYYFLGIEVCR 676
           K+LG L+YFLGIEV +
Sbjct: 888 KDLGELHYFLGIEVSK 903


>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1478

 Score = 97.4 bits (241), Expect(3) = 2e-31
 Identities = 55/126 (43%), Positives = 77/126 (61%), Gaps = 6/126 (4%)
 Frame = +1

Query: 175  FNQLDDVDFTEAFSLVVKASTVRTILTIALSRGSIVKQLDVSNTFLHAHLAEIVYMQHPS 354
            F Q   +D+ + FS VVKA+T+R IL++A+S+G  ++QLDV N FLH +L E VYM  P 
Sbjct: 1007 FKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPP 1066

Query: 355  GYEVPGKENYVCHLKRSLYG*KQAPRVGFKDLALFCSGLAF------SSLNMIIPFSLTN 516
            G+E P K ++VC L ++LYG KQAPR  F  L+     L F      +SL  +    +T 
Sbjct: 1067 GFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTSLFFLNKGDITM 1126

Query: 517  QQMVYV 534
              +VYV
Sbjct: 1127 FVLVYV 1132



 Score = 58.5 bits (140), Expect(3) = 2e-31
 Identities = 24/45 (53%), Positives = 34/45 (75%)
 Frame = +3

Query: 36   IQNGAWDMVPYGKSRNALGAKWVFKLKLMADGSIKRHKARLVAKG 170
            ++N  W +VP  + RN +G KWV+K+K  ADG++ R+KARLVAKG
Sbjct: 962  VKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKG 1006



 Score = 27.3 bits (59), Expect(3) = 2e-31
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +2

Query: 629  KNLGNLYYFLGIEVCR 676
            K+LG L+YFLGIEV +
Sbjct: 1159 KDLGELHYFLGIEVSK 1174


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score = 97.4 bits (241), Expect(3) = 2e-31
 Identities = 55/126 (43%), Positives = 77/126 (61%), Gaps = 6/126 (4%)
 Frame = +1

Query: 175  FNQLDDVDFTEAFSLVVKASTVRTILTIALSRGSIVKQLDVSNTFLHAHLAEIVYMQHPS 354
            F Q   +D+ + FS VVKA+T+R IL++A+S+G  ++QLDV N FLH +L E VYM  P 
Sbjct: 1014 FKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPP 1073

Query: 355  GYEVPGKENYVCHLKRSLYG*KQAPRVGFKDLALFCSGLAF------SSLNMIIPFSLTN 516
            G+E P K ++VC L ++LYG KQAPR  F  L+     L F      +SL  +    +T 
Sbjct: 1074 GFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKPDTSLFFLNKGDITM 1133

Query: 517  QQMVYV 534
              +VYV
Sbjct: 1134 FVLVYV 1139



 Score = 58.5 bits (140), Expect(3) = 2e-31
 Identities = 24/45 (53%), Positives = 34/45 (75%)
 Frame = +3

Query: 36   IQNGAWDMVPYGKSRNALGAKWVFKLKLMADGSIKRHKARLVAKG 170
            ++N  W +VP  + RN +G KWV+K+K  ADG++ R+KARLVAKG
Sbjct: 969  VKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKG 1013



 Score = 27.3 bits (59), Expect(3) = 2e-31
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +2

Query: 629  KNLGNLYYFLGIEVCR 676
            K+LG L+YFLGIEV +
Sbjct: 1166 KDLGELHYFLGIEVSK 1181


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108708884|gb|ABF96679.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1437

 Score = 99.4 bits (246), Expect(3) = 2e-31
 Identities = 58/126 (46%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
 Frame = +1

Query: 175  FNQLDDVDFTEAFSLVVKASTVRTILTIALSRGSIVKQLDVSNTFLHAHLAEIVYMQHPS 354
            F Q   +D+ + FS VVKA+T+R IL+IA+SRG  ++QLDV N FLH  L E VYM+ P 
Sbjct: 992  FKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWCLRQLDVQNAFLHGVLEEEVYMKQPP 1051

Query: 355  GYEVPGKENYVCHLKRSLYG*KQAPRVGFKDLALFCSGLAF------SSLNMIIPFSLTN 516
            GYE P   +YVC L ++LYG KQAPR  +  L+     L F      +SL      SLT 
Sbjct: 1052 GYENPSTPDYVCKLDKALYGLKQAPRAWYSRLSGKLHDLGFKGSKADTSLFFYNKGSLTI 1111

Query: 517  QQMVYV 534
              ++YV
Sbjct: 1112 FLLIYV 1117



 Score = 56.2 bits (134), Expect(3) = 2e-31
 Identities = 24/45 (53%), Positives = 32/45 (71%)
 Frame = +3

Query: 36   IQNGAWDMVPYGKSRNALGAKWVFKLKLMADGSIKRHKARLVAKG 170
            I+N  W +VP  + RN +  KWV+K+K   DGS+ R+KARLVAKG
Sbjct: 947  IKNNTWHLVPPQQGRNVIDCKWVYKIKRKQDGSLDRYKARLVAKG 991



 Score = 27.7 bits (60), Expect(3) = 2e-31
 Identities = 11/16 (68%), Positives = 15/16 (93%)
 Frame = +2

Query: 629  KNLGNLYYFLGIEVCR 676
            K+LG+L+YFLGIEV +
Sbjct: 1144 KDLGDLHYFLGIEVTK 1159


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score = 99.8 bits (247), Expect(2) = 2e-31
 Identities = 52/103 (50%), Positives = 67/103 (65%)
 Frame = +1

Query: 175  FNQLDDVDFTEAFSLVVKASTVRTILTIALSRGSIVKQLDVSNTFLHAHLAEIVYMQHPS 354
            F Q   +D+ + FS VVKA+T+R IL+IA+SRG  ++QLDV N FLH  L E VYMQ P 
Sbjct: 997  FKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWSLRQLDVQNAFLHGFLEEEVYMQQPP 1056

Query: 355  GYEVPGKENYVCHLKRSLYG*KQAPRVGFKDLALFCSGLAFSS 483
            G+E   K NYVC L ++LYG KQAPR  +  L+     L F +
Sbjct: 1057 GFESFSKPNYVCKLDKALYGLKQAPRAWYSRLSKKLVELGFEA 1099



 Score = 63.2 bits (152), Expect(2) = 2e-31
 Identities = 26/45 (57%), Positives = 35/45 (77%)
 Frame = +3

Query: 36   IQNGAWDMVPYGKSRNALGAKWVFKLKLMADGSIKRHKARLVAKG 170
            I+N  W +VPY K +N +G KWV+K+K  ADG++ R+KARLVAKG
Sbjct: 952  IKNDTWHLVPYEKGQNVIGCKWVYKIKRKADGTLDRYKARLVAKG 996


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score = 99.0 bits (245), Expect(2) = 4e-31
 Identities = 51/103 (49%), Positives = 67/103 (65%)
 Frame = +1

Query: 175  FNQLDDVDFTEAFSLVVKASTVRTILTIALSRGSIVKQLDVSNTFLHAHLAEIVYMQHPS 354
            F Q   +D+ + FS VVKA+T+R IL+IA+SRG  ++QLDV N FLH  L E VYMQ P 
Sbjct: 1006 FKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWSLRQLDVQNAFLHGFLEEEVYMQQPP 1065

Query: 355  GYEVPGKENYVCHLKRSLYG*KQAPRVGFKDLALFCSGLAFSS 483
            G+E   K +YVC L ++LYG KQAPR  +  L+     L F +
Sbjct: 1066 GFESSSKPDYVCKLDKALYGLKQAPRAWYSRLSKKLVELGFEA 1108



 Score = 62.8 bits (151), Expect(2) = 4e-31
 Identities = 26/45 (57%), Positives = 35/45 (77%)
 Frame = +3

Query: 36   IQNGAWDMVPYGKSRNALGAKWVFKLKLMADGSIKRHKARLVAKG 170
            I+N  W +VPY K +N +G KWV+K+K  ADG++ R+KARLVAKG
Sbjct: 961  IKNDTWHLVPYEKGQNIIGCKWVYKIKRKADGTLDRYKARLVAKG 1005


>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
            sativa Japonica Group]
          Length = 1448

 Score =  100 bits (248), Expect(2) = 8e-31
 Identities = 51/103 (49%), Positives = 68/103 (66%)
 Frame = +1

Query: 175  FNQLDDVDFTEAFSLVVKASTVRTILTIALSRGSIVKQLDVSNTFLHAHLAEIVYMQHPS 354
            F Q   +D+ + FS VVKA+T+R IL+IA+SRG  ++QLDV N FLH  L E VYMQ P 
Sbjct: 1009 FKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWSLRQLDVQNDFLHGFLEEEVYMQQPP 1068

Query: 355  GYEVPGKENYVCHLKRSLYG*KQAPRVGFKDLALFCSGLAFSS 483
            G+E   K +YVC L ++LYG KQAPR  +  L+   + L F +
Sbjct: 1069 GFESSSKPDYVCKLNKALYGLKQAPRAWYSRLSKKLTELGFEA 1111



 Score = 60.5 bits (145), Expect(2) = 8e-31
 Identities = 24/45 (53%), Positives = 34/45 (75%)
 Frame = +3

Query: 36   IQNGAWDMVPYGKSRNALGAKWVFKLKLMADGSIKRHKARLVAKG 170
            I+N  W +VPY K +N +G KWV+K+K  ADG++ R+K RL+AKG
Sbjct: 964  IKNDTWHLVPYEKGQNIIGCKWVYKVKRKADGTLDRYKTRLIAKG 1008


>gb|AAU90288.2| Polyprotein, putative [Solanum demissum]
          Length = 1017

 Score = 93.6 bits (231), Expect(2) = 8e-31
 Identities = 50/101 (49%), Positives = 66/101 (65%)
 Frame = +1

Query: 175  FNQLDDVDFTEAFSLVVKASTVRTILTIALSRGSIVKQLDVSNTFLHAHLAEIVYMQHPS 354
            ++Q   +DF + FS VVK +T+R +L++A+S    V QLD+SN FLH  L EIVYM  P 
Sbjct: 705  YHQRPGLDFADTFSPVVKPATIRLLLSLAVSHQWHVTQLDISNAFLHGKLDEIVYMSQPP 764

Query: 355  GYEVPGKENYVCHLKRSLYG*KQAPRVGFKDLALFCSGLAF 477
            G+  P + ++VC LKRSLYG KQAPR+  K LA     L F
Sbjct: 765  GFVDPTRPDHVCLLKRSLYGLKQAPRMWNKCLADVLLSLGF 805



 Score = 67.0 bits (162), Expect(2) = 8e-31
 Identities = 29/45 (64%), Positives = 36/45 (80%)
 Frame = +3

Query: 36  IQNGAWDMVPYGKSRNALGAKWVFKLKLMADGSIKRHKARLVAKG 170
           IQNG W++VP   S+N +G KWVFK KL +DGS+ R+KARLVAKG
Sbjct: 660 IQNGTWELVPLSPSQNIIGCKWVFKRKLKSDGSLDRYKARLVAKG 704


>gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [Oryza sativa
            Japonica Group] gi|31431217|gb|AAP53032.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1042

 Score =  102 bits (253), Expect(2) = 4e-30
 Identities = 53/103 (51%), Positives = 69/103 (66%)
 Frame = +1

Query: 175  FNQLDDVDFTEAFSLVVKASTVRTILTIALSRGSIVKQLDVSNTFLHAHLAEIVYMQHPS 354
            F Q   +D+ + FS VVKA+T+R IL+IA+SRG  ++QLDVSN FLH  L E VYM+ P 
Sbjct: 837  FKQRYGIDYEDTFSPVVKAATIRVILSIAVSRGWSLRQLDVSNAFLHGILEEEVYMRQPL 896

Query: 355  GYEVPGKENYVCHLKRSLYG*KQAPRVGFKDLALFCSGLAFSS 483
            GYEV    N+VC L ++LYG KQAPRV +  L+     L F +
Sbjct: 897  GYEVSSLPNHVCKLDKALYGLKQAPRVWYSRLSTKLQELGFQA 939



 Score = 56.2 bits (134), Expect(2) = 4e-30
 Identities = 24/45 (53%), Positives = 32/45 (71%)
 Frame = +3

Query: 36  IQNGAWDMVPYGKSRNALGAKWVFKLKLMADGSIKRHKARLVAKG 170
           ++N  W +VP    RN +  KWV+K+K  ADGS+ R+KARLVAKG
Sbjct: 792 MKNKTWHLVPAKSDRNVIDCKWVYKIKRKADGSLDRYKARLVAKG 836


>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
           gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
           Japonica Group]
          Length = 821

 Score = 99.4 bits (246), Expect(2) = 4e-30
 Identities = 50/101 (49%), Positives = 66/101 (65%)
 Frame = +1

Query: 175 FNQLDDVDFTEAFSLVVKASTVRTILTIALSRGSIVKQLDVSNTFLHAHLAEIVYMQHPS 354
           F Q   +D+ + FS VVKA+T+R +L++A+SRG  ++QLDV N FLH  L E VYM+ P 
Sbjct: 376 FKQRYGIDYEDTFSPVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMEQPP 435

Query: 355 GYEVPGKENYVCHLKRSLYG*KQAPRVGFKDLALFCSGLAF 477
           GYE     NYVC L ++LYG KQAPR  +  L+   S L F
Sbjct: 436 GYEKKSMPNYVCKLDKALYGLKQAPRAWYSRLSTKLSELGF 476



 Score = 58.9 bits (141), Expect(2) = 4e-30
 Identities = 26/45 (57%), Positives = 33/45 (73%)
 Frame = +3

Query: 36  IQNGAWDMVPYGKSRNALGAKWVFKLKLMADGSIKRHKARLVAKG 170
           I+N  W +VP  K RN +  KWV+K+K  ADGS+ R+KARLVAKG
Sbjct: 331 IENKTWHLVPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKG 375


>gb|AAL31076.1|AC091749_5 putaive copia-like retrotransposon polyprotein, 5'-partial [Oryza
           sativa Japonica Group]
          Length = 491

 Score =  102 bits (253), Expect(2) = 4e-30
 Identities = 53/103 (51%), Positives = 69/103 (66%)
 Frame = +1

Query: 175 FNQLDDVDFTEAFSLVVKASTVRTILTIALSRGSIVKQLDVSNTFLHAHLAEIVYMQHPS 354
           F Q   +D+ + FS VVKA+T+R IL+IA+SRG  ++QLDVSN FLH  L E VYM+ P 
Sbjct: 286 FKQRYGIDYEDTFSPVVKAATIRVILSIAVSRGWSLRQLDVSNAFLHGILEEEVYMRQPL 345

Query: 355 GYEVPGKENYVCHLKRSLYG*KQAPRVGFKDLALFCSGLAFSS 483
           GYEV    N+VC L ++LYG KQAPRV +  L+     L F +
Sbjct: 346 GYEVSSLPNHVCKLDKALYGLKQAPRVWYSRLSTKLQELGFQA 388



 Score = 56.2 bits (134), Expect(2) = 4e-30
 Identities = 24/45 (53%), Positives = 32/45 (71%)
 Frame = +3

Query: 36  IQNGAWDMVPYGKSRNALGAKWVFKLKLMADGSIKRHKARLVAKG 170
           ++N  W +VP    RN +  KWV+K+K  ADGS+ R+KARLVAKG
Sbjct: 241 MKNKTWHLVPAKSDRNVIDCKWVYKIKRKADGSLDRYKARLVAKG 285


>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
            Group]
          Length = 1399

 Score = 99.0 bits (245), Expect(2) = 5e-30
 Identities = 50/101 (49%), Positives = 66/101 (65%)
 Frame = +1

Query: 175  FNQLDDVDFTEAFSLVVKASTVRTILTIALSRGSIVKQLDVSNTFLHAHLAEIVYMQHPS 354
            F Q   +D+ + FS VVKA+T+R +L++A+SRG  ++QLDV N FLH  L E VYM+ P 
Sbjct: 954  FKQRYGIDYEDTFSPVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMKQPP 1013

Query: 355  GYEVPGKENYVCHLKRSLYG*KQAPRVGFKDLALFCSGLAF 477
            GYE     NYVC L ++LYG KQAPR  +  L+   S L F
Sbjct: 1014 GYEKKSMPNYVCKLDKALYGLKQAPRAWYSRLSTKLSELGF 1054



 Score = 58.9 bits (141), Expect(2) = 5e-30
 Identities = 26/45 (57%), Positives = 33/45 (73%)
 Frame = +3

Query: 36   IQNGAWDMVPYGKSRNALGAKWVFKLKLMADGSIKRHKARLVAKG 170
            I+N  W +VP  K RN +  KWV+K+K  ADGS+ R+KARLVAKG
Sbjct: 909  IENKTWHLVPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKG 953


>gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1241

 Score = 99.0 bits (245), Expect(2) = 5e-30
 Identities = 50/101 (49%), Positives = 66/101 (65%)
 Frame = +1

Query: 175  FNQLDDVDFTEAFSLVVKASTVRTILTIALSRGSIVKQLDVSNTFLHAHLAEIVYMQHPS 354
            F Q   +D+ + FS VVKA+T+R +L++A+SRG  ++QLDV N FLH  L E VYM+ P 
Sbjct: 900  FKQRYGIDYEDTFSPVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMKQPP 959

Query: 355  GYEVPGKENYVCHLKRSLYG*KQAPRVGFKDLALFCSGLAF 477
            GYE     NYVC L ++LYG KQAPR  +  L+   S L F
Sbjct: 960  GYEKKSMPNYVCKLDKALYGLKQAPRAWYSRLSTKLSELGF 1000



 Score = 58.9 bits (141), Expect(2) = 5e-30
 Identities = 26/45 (57%), Positives = 33/45 (73%)
 Frame = +3

Query: 36  IQNGAWDMVPYGKSRNALGAKWVFKLKLMADGSIKRHKARLVAKG 170
           I+N  W +VP  K RN +  KWV+K+K  ADGS+ R+KARLVAKG
Sbjct: 855 IENKTWHLVPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKG 899


>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
          Length = 1448

 Score = 97.1 bits (240), Expect(2) = 7e-30
 Identities = 50/103 (48%), Positives = 67/103 (65%)
 Frame = +1

Query: 175  FNQLDDVDFTEAFSLVVKASTVRTILTIALSRGSIVKQLDVSNTFLHAHLAEIVYMQHPS 354
            F Q   +D+ + FS VVKA+T+R IL+IA+SRG  ++QLDV N FL   L E VYMQ P 
Sbjct: 1009 FKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWNLRQLDVQNDFLRGFLEEEVYMQQPP 1068

Query: 355  GYEVPGKENYVCHLKRSLYG*KQAPRVGFKDLALFCSGLAFSS 483
            G+E   K +YVC L ++LYG KQAPR  +  L+   + L F +
Sbjct: 1069 GFESSSKRDYVCKLNKALYGLKQAPRAWYSRLSKKLTELGFEA 1111



 Score = 60.5 bits (145), Expect(2) = 7e-30
 Identities = 24/45 (53%), Positives = 34/45 (75%)
 Frame = +3

Query: 36   IQNGAWDMVPYGKSRNALGAKWVFKLKLMADGSIKRHKARLVAKG 170
            I+N  W +VPY K +N +G KWV+K+K  ADG++ R+K RL+AKG
Sbjct: 964  IKNDTWHLVPYEKGQNIIGCKWVYKVKRKADGTLDRYKTRLIAKG 1008


>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 932

 Score =  102 bits (255), Expect(2) = 1e-29
 Identities = 51/103 (49%), Positives = 70/103 (67%)
 Frame = +1

Query: 175 FNQLDDVDFTEAFSLVVKASTVRTILTIALSRGSIVKQLDVSNTFLHAHLAEIVYMQHPS 354
           F Q   +D+ + FSLVVKA+T+R IL+IA+S+G  ++QLDV N FLH +L E VYM+ P 
Sbjct: 495 FKQRYGIDYEDTFSLVVKAATIRLILSIAVSKGWSLRQLDVQNAFLHGYLEEEVYMRQPP 554

Query: 355 GYEVPGKENYVCHLKRSLYG*KQAPRVGFKDLALFCSGLAFSS 483
           G+E  G+ NY+C L ++LYG KQAPR  +  L+     L F S
Sbjct: 555 GFENKGQPNYLCKLDKALYGLKQAPRAWYSRLSTKLQELGFIS 597



 Score = 53.9 bits (128), Expect(2) = 1e-29
 Identities = 23/45 (51%), Positives = 32/45 (71%)
 Frame = +3

Query: 36  IQNGAWDMVPYGKSRNALGAKWVFKLKLMADGSIKRHKARLVAKG 170
           + N  W +VP  + +N +  KW++K+K  ADGSI R+KARLVAKG
Sbjct: 450 MSNKTWHLVPPTQGKNIIDCKWMYKIKRKADGSIDRYKARLVAKG 494


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score = 96.7 bits (239), Expect(3) = 2e-29
 Identities = 56/122 (45%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
 Frame = +1

Query: 175  FNQLDDVDFTEAFSLVVKASTVRTILTIALSRGSIVKQLDVSNTFLHAHLAEIVYMQHPS 354
            F+Q    DFTE FS VVK STVR + TIALSR   +KQLDV+N FL+  L E V+MQ P 
Sbjct: 1006 FHQQAGFDFTETFSPVVKPSTVRVVFTIALSRNWAIKQLDVNNAFLNGDLQEEVFMQQPQ 1065

Query: 355  GYEVPGKENYVCHLKRSLYG*KQAPRVGFKDL--ALFCSGLAFSSLNMIIPFSLTNQQMV 528
            G+      N VC L ++LYG KQAPR  F+ L  AL   G   +  +  +    T   + 
Sbjct: 1066 GFIDEQNPNLVCRLHKALYGLKQAPRAWFEKLHRALLSFGFVSAKSDQSLFLRFTPNHIT 1125

Query: 529  YV 534
            YV
Sbjct: 1126 YV 1127



 Score = 55.1 bits (131), Expect(3) = 2e-29
 Identities = 24/50 (48%), Positives = 33/50 (66%)
 Frame = +3

Query: 39   QNGAWDMVPYGKSRNALGAKWVFKLKLMADGSIKRHKARLVAKGLL*SAG 188
            +N  W +VP    R A+G KWV+K K   DG+++++KARLVAKG    AG
Sbjct: 962  RNNTWSLVPLPAGRQAIGCKWVYKTKENPDGTVQKYKARLVAKGFHQQAG 1011



 Score = 24.6 bits (52), Expect(3) = 2e-29
 Identities = 9/14 (64%), Positives = 13/14 (92%)
 Frame = +2

Query: 629  KNLGNLYYFLGIEV 670
            K+LG ++YFLGI+V
Sbjct: 1158 KDLGEVHYFLGIQV 1171


>ref|YP_514636.1| hypothetical protein OrsaiPp07 [Oryza sativa Indica Group]
           gi|289065044|ref|YP_003433855.1| hypothetical protein
           OrrupM_p18 [Oryza rufipogon] gi|74100111|gb|AAZ99275.1|
           hypothetical protein (mitochondrion) [Oryza sativa
           Indica Group] gi|74100166|gb|AAZ99329.1| hypothetical
           protein (mitochondrion) [Oryza sativa Japonica Group]
           gi|74100220|gb|AAZ99382.1| hypothetical protein
           (mitochondrion) [Oryza sativa Japonica Group]
           gi|285026126|dbj|BAI67959.1| hypothetical protein [Oryza
           rufipogon] gi|285026155|dbj|BAI67987.1| hypothetical
           protein [Oryza sativa Indica Group]
           gi|353685219|gb|AER12982.1| hypothetical protein
           (mitochondrion) [Oryza sativa Indica Group]
           gi|353685288|gb|AER13050.1| hypothetical protein
           (mitochondrion) [Oryza sativa Indica Group]
           gi|374277649|gb|AEZ03755.1| hypothetical protein
           (mitochondrion) [Oryza sativa Indica Group]
           gi|374277659|gb|AEZ03764.1| hypothetical protein
           (mitochondrion) [Oryza sativa Indica Group]
           gi|528540457|dbj|BAN67511.1| hypothetical protein
           (mitochondrion) [Oryza rufipogon]
           gi|528540460|dbj|BAN67513.1| hypothetical protein
           (mitochondrion) [Oryza rufipogon]
          Length = 490

 Score = 99.4 bits (246), Expect(2) = 2e-29
 Identities = 51/101 (50%), Positives = 66/101 (65%)
 Frame = +1

Query: 175 FNQLDDVDFTEAFSLVVKASTVRTILTIALSRGSIVKQLDVSNTFLHAHLAEIVYMQHPS 354
           F Q   +D+ E FS VVKA+T+R IL++A+S G  ++QLDV N FLH  L E VYM+ P 
Sbjct: 54  FKQRYGIDYEETFSPVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGVLEEDVYMRQPP 113

Query: 355 GYEVPGKENYVCHLKRSLYG*KQAPRVGFKDLALFCSGLAF 477
           GYE   K +YVC L ++LYG KQAPR  F  L++    L F
Sbjct: 114 GYEDKSKLDYVCKLDKALYGLKQAPRAWFSRLSMKLQNLGF 154



 Score = 56.6 bits (135), Expect(2) = 2e-29
 Identities = 24/45 (53%), Positives = 33/45 (73%)
 Frame = +3

Query: 36  IQNGAWDMVPYGKSRNALGAKWVFKLKLMADGSIKRHKARLVAKG 170
           ++N  W +VP  + RN +  KWV+K+K  ADG+I R+KARLVAKG
Sbjct: 9   MRNNTWHLVPATQGRNLIDCKWVYKIKRKADGTIDRYKARLVAKG 53


>gb|ABA99232.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 308

 Score = 99.4 bits (246), Expect(2) = 2e-29
 Identities = 51/101 (50%), Positives = 66/101 (65%)
 Frame = +1

Query: 175 FNQLDDVDFTEAFSLVVKASTVRTILTIALSRGSIVKQLDVSNTFLHAHLAEIVYMQHPS 354
           F Q   +D+ E FS VVKA+T+R IL++A+S G  ++QLDV N FLH  L E VYM+ P 
Sbjct: 54  FKQRYGIDYEETFSPVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGVLEEDVYMRQPP 113

Query: 355 GYEVPGKENYVCHLKRSLYG*KQAPRVGFKDLALFCSGLAF 477
           GYE   K +YVC L ++LYG KQAPR  F  L++    L F
Sbjct: 114 GYEDKSKLDYVCKLDKALYGLKQAPRAWFSRLSMKLQNLGF 154



 Score = 56.6 bits (135), Expect(2) = 2e-29
 Identities = 24/45 (53%), Positives = 33/45 (73%)
 Frame = +3

Query: 36  IQNGAWDMVPYGKSRNALGAKWVFKLKLMADGSIKRHKARLVAKG 170
           ++N  W +VP  + RN +  KWV+K+K  ADG+I R+KARLVAKG
Sbjct: 9   MRNNTWHLVPATQGRNLIDCKWVYKIKRKADGTIDRYKARLVAKG 53


>emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]
          Length = 1002

 Score = 85.5 bits (210), Expect(3) = 2e-29
 Identities = 39/92 (42%), Positives = 60/92 (65%)
 Frame = +1

Query: 175 FNQLDDVDFTEAFSLVVKASTVRTILTIALSRGSIVKQLDVSNTFLHAHLAEIVYMQHPS 354
           F Q   V+FT+ FS V+KAST+R + T+A++    ++Q+D +N FL+  + E VY+  P+
Sbjct: 561 FQQYAGVEFTDTFSPVIKASTIRVVFTLAITYNWEIRQIDFNNAFLNGEITETVYLSQPA 620

Query: 355 GYEVPGKENYVCHLKRSLYG*KQAPRVGFKDL 450
           G+       +VC L+++LYG KQAPRV F  L
Sbjct: 621 GFVSTSHPQHVCKLQKALYGLKQAPRVWFHKL 652



 Score = 58.2 bits (139), Expect(3) = 2e-29
 Identities = 24/51 (47%), Positives = 37/51 (72%)
 Frame = +3

Query: 36  IQNGAWDMVPYGKSRNALGAKWVFKLKLMADGSIKRHKARLVAKGLL*SAG 188
           ++N  W +VP+  S N + +KW+F++K  +DG+I+R+KARLVAKG    AG
Sbjct: 516 VRNNTWTLVPFHPSMNVIDSKWIFRVKYNSDGTIQRYKARLVAKGFQQYAG 566



 Score = 32.3 bits (72), Expect(3) = 2e-29
 Identities = 23/80 (28%), Positives = 32/80 (40%)
 Frame = +3

Query: 435 WFQRFSTFLFRFGFQQSKYDHSLFINKSADGICLIWCMEMTLIRTGXXXXXXXXXITYLA 614
           WF +    L  +GF  S  D SLFI K      L+      L+ TG         I  L 
Sbjct: 648 WFHKLREALHTWGFISSTSDTSLFIYKHNGNFLLLLVYVDDLLITGNNVPLVQTLIQDLQ 707

Query: 615 SEFCTKI*GIFTTFLELKSV 674
           + F  K  G+   FL  +++
Sbjct: 708 NRFALKDLGLVKDFLGFEAL 727


>ref|XP_004986808.1| PREDICTED: uncharacterized protein LOC101773259 [Setaria italica]
          Length = 1950

 Score =  105 bits (263), Expect(2) = 3e-29
 Identities = 52/101 (51%), Positives = 67/101 (66%)
 Frame = +1

Query: 175  FNQLDDVDFTEAFSLVVKASTVRTILTIALSRGSIVKQLDVSNTFLHAHLAEIVYMQHPS 354
            F+Q + VD+ E FS VVK +T+R++L+IA SR   + QLDV N FLH HL E VY Q P 
Sbjct: 1503 FSQREGVDYDETFSPVVKPATIRSVLSIAASRAWPIHQLDVKNAFLHGHLEETVYCQQPP 1562

Query: 355  GYEVPGKENYVCHLKRSLYG*KQAPRVGFKDLALFCSGLAF 477
            G+  PG  +YVC L++SLYG KQAPR  ++  A F   L F
Sbjct: 1563 GFVDPGAPDYVCRLQKSLYGLKQAPRAWYQRFATFIGQLGF 1603



 Score = 49.7 bits (117), Expect(2) = 3e-29
 Identities = 20/45 (44%), Positives = 27/45 (60%)
 Frame = +3

Query: 36   IQNGAWDMVPYGKSRNALGAKWVFKLKLMADGSIKRHKARLVAKG 170
            + N  W +VP     N +  KW+F+ K  ADGS+ RHKAR V +G
Sbjct: 1458 VDNNTWQLVPRPPDANVVTGKWIFRHKFHADGSLARHKARWVVRG 1502