BLASTX nr result
ID: Papaver27_contig00055945
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00055945
(648 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containi... 278 8e-73
ref|XP_007159689.1| hypothetical protein PHAVU_002G258900g [Phas... 268 8e-70
ref|XP_007227261.1| hypothetical protein PRUPE_ppa017811mg [Prun... 268 8e-70
ref|XP_002312667.1| pentatricopeptide repeat-containing family p... 263 3e-68
ref|XP_006364563.1| PREDICTED: pentatricopeptide repeat-containi... 258 8e-67
ref|XP_004240634.1| PREDICTED: pentatricopeptide repeat-containi... 257 2e-66
ref|XP_004504137.1| PREDICTED: pentatricopeptide repeat-containi... 254 2e-65
ref|XP_003531325.2| PREDICTED: pentatricopeptide repeat-containi... 254 2e-65
ref|XP_002530052.1| pentatricopeptide repeat-containing protein,... 254 2e-65
gb|EYU30611.1| hypothetical protein MIMGU_mgv1a020771mg [Mimulus... 254 2e-65
gb|EXB82495.1| hypothetical protein L484_027670 [Morus notabilis] 253 5e-65
ref|XP_004310156.1| PREDICTED: pentatricopeptide repeat-containi... 252 6e-65
ref|XP_007044848.1| Pentatricopeptide repeat superfamily protein... 251 1e-64
ref|XP_006483972.1| PREDICTED: pentatricopeptide repeat-containi... 245 7e-63
ref|XP_006438222.1| hypothetical protein CICLE_v10031251mg [Citr... 245 7e-63
ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containi... 244 1e-62
ref|XP_006836595.1| hypothetical protein AMTR_s00131p00098210 [A... 244 2e-62
ref|XP_006417164.1| hypothetical protein EUTSA_v10007381mg [Eutr... 236 4e-60
ref|XP_006304861.1| hypothetical protein CARUB_v10012598mg [Caps... 233 3e-59
ref|XP_002889980.1| pentatricopeptide repeat-containing protein ... 231 2e-58
>ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial [Vitis vinifera]
gi|296081374|emb|CBI16807.3| unnamed protein product
[Vitis vinifera]
Length = 519
Score = 278 bits (712), Expect = 8e-73
Identities = 131/215 (60%), Positives = 165/215 (76%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VTYN+ LNYCC+ +LEEA L+KKMERS +PD YSYN+ LK LCKANR+D AY +
Sbjct: 252 PDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMM 311
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+V ME +GLCD VSYNT+I+A C A T++AY++FEEM GKG PDVVTFTILI AF +
Sbjct: 312 MVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLR 371
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+G +++A+ LLD+M+ GL PDRVLYTT++DHLCK+G++ A + F DM ITPDV+
Sbjct: 372 EGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVS 431
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YNALINGL +A RV+E M YEDM G PDEVT
Sbjct: 432 YNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVT 466
Score = 118 bits (296), Expect = 1e-24
Identities = 67/215 (31%), Positives = 104/215 (48%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VTY I +N C G + A ++ + M R PD + + LC ++D AY L
Sbjct: 147 PDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYEL 206
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
V M R YN++I +C A KA + M G EPD+VT+ +L+N
Sbjct: 207 TVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCD 266
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+ + AE+L+ +M + G+ PD Y ++ LCK+ R+D+A + + DV+
Sbjct: 267 ELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVS 326
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YN +I L A + +E+M G PD VT
Sbjct: 327 YNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVT 361
Score = 100 bits (248), Expect = 5e-19
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 1/213 (0%)
Frame = +2
Query: 11 VTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLLVK 190
+ YN + + A + +M ++++Y++F+ LCK LL +
Sbjct: 45 IDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLL-E 103
Query: 191 TMEKRGLC-DTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKG 367
M++ G D +YN + C + A + + M KG EPD+VT+TI+IN + G
Sbjct: 104 DMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAG 163
Query: 368 RADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVICYN 547
R D A ++ M +KG PD ++ LC G+VD A R RI YN
Sbjct: 164 RFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYN 223
Query: 548 ALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
+LING +A + + M+RNGC PD VT
Sbjct: 224 SLINGFCQAGWIDKAQSIISFMRRNGCEPDLVT 256
Score = 77.8 bits (190), Expect = 3e-12
Identities = 46/151 (30%), Positives = 72/151 (47%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VT+ I + G A KLL +M PD Y + LCK +M A+S+
Sbjct: 357 PDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSV 416
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+E D VSYN +I C A +A ++E+M G PD VTF ++I
Sbjct: 417 FCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIW 476
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMID 454
+ + +A + D+M +KG D + T+++
Sbjct: 477 EKKLSVACRVWDQMMEKGFTLDGAVSETLVN 507
Score = 62.4 bits (150), Expect = 1e-07
Identities = 39/142 (27%), Positives = 61/142 (42%)
Frame = +2
Query: 221 VSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGRADLAEDLLDR 400
++Y I +Y A +A + F+EM+ + + I ++ R DLAE DR
Sbjct: 10 LAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDR 69
Query: 401 MSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVICYNALINGLFKAFR 580
M +G + Y+ I LCK + DM+RL PD+ YN +N L +
Sbjct: 70 MIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQ 129
Query: 581 VAEGMQFYEDMQRNGCHPDEVT 646
+ + + M G PD VT
Sbjct: 130 LDVALGVVQTMVEKGREPDIVT 151
>ref|XP_007159689.1| hypothetical protein PHAVU_002G258900g [Phaseolus vulgaris]
gi|561033104|gb|ESW31683.1| hypothetical protein
PHAVU_002G258900g [Phaseolus vulgaris]
Length = 518
Score = 268 bits (686), Expect = 8e-70
Identities = 120/215 (55%), Positives = 161/215 (74%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VTYN LNYCC+ GML+EA +L++ MERS +PD YSYN+ LK CKAN +D AY +
Sbjct: 255 PDLVTYNTLLNYCCDEGMLDEALRLVETMERSGVEPDFYSYNELLKCFCKANMVDRAYLM 314
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
LV+ M+ +G+CD VSYNT+I A+C R T++ Y +FEEM GKG PD+VTF ILI+AF +
Sbjct: 315 LVERMQTKGMCDVVSYNTLITAFCKVRRTRRGYELFEEMCGKGIRPDMVTFNILIDAFLR 374
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+G + + LLD M++ G+ PDR+ YT ++DHLCK+G+VD A + FRDM + PDVI
Sbjct: 375 EGSIQVVKKLLDEMTRLGILPDRIFYTAVVDHLCKTGKVDTADSVFRDMVENGVNPDVIS 434
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YNAL+NG KA RV + M+ Y++MQRNG +PDEVT
Sbjct: 435 YNALVNGFCKASRVMDAMRLYDEMQRNGLYPDEVT 469
Score = 108 bits (270), Expect = 1e-21
Identities = 64/215 (29%), Positives = 104/215 (48%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+V+Y I ++ C +EAA++ + + PD + + LC R+D AY L
Sbjct: 150 PDVVSYTIIVDALCKAQRYDEAARVWRGLTGKGLSPDFKACVALVVGLCGGGRVDLAYEL 209
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+V ++ + + YN +I +C KA ++ MS G PD+VT+ L+N
Sbjct: 210 VVGVIKGGVKVNILVYNALIDGFCRMGRVDKAMKIKAFMSRNGCVPDLVTYNTLLNYCCD 269
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+G D A L++ M + G+ PD Y ++ CK+ VD+A + + + DV+
Sbjct: 270 EGMLDEALRLVETMERSGVEPDFYSYNELLKCFCKANMVDRAYLMLVERMQTKGMCDVVS 329
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YN LI K R G + +E+M G PD VT
Sbjct: 330 YNTLITAFCKVRRTRRGYELFEEMCGKGIRPDMVT 364
Score = 105 bits (262), Expect = 1e-20
Identities = 59/188 (31%), Positives = 96/188 (51%)
Frame = +2
Query: 74 LLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLLVKTMEKRGLCDTVSYNTMIRAYC 253
LL M PD +++N +L LC+ NR+++A L + D VSY ++ A C
Sbjct: 104 LLLDMHALGFVPDIWAFNTYLSFLCRHNRLETALELFHSMPSEGREPDVVSYTIIVDALC 163
Query: 254 WARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGRADLAEDLLDRMSQKGLFPDRV 433
A+ +A R++ ++GKG PD L+ GR DLA +L+ + + G+ + +
Sbjct: 164 KAQRYDEAARVWRGLTGKGLSPDFKACVALVVGLCGGGRVDLAYELVVGVIKGGVKVNIL 223
Query: 434 LYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVICYNALINGLFKAFRVAEGMQFYEDM 613
+Y +ID C+ GRVD+A M R PD++ YN L+N + E ++ E M
Sbjct: 224 VYNALIDGFCRMGRVDKAMKIKAFMSRNGCVPDLVTYNTLLNYCCDEGMLDEALRLVETM 283
Query: 614 QRNGCHPD 637
+R+G PD
Sbjct: 284 ERSGVEPD 291
Score = 100 bits (248), Expect = 5e-19
Identities = 59/178 (33%), Positives = 94/178 (52%), Gaps = 1/178 (0%)
Frame = +2
Query: 116 YSYNQFLKALCKA-NRMDSAYSLLVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFE 292
++Y++F+ ALC A N + + LL+ + D ++NT + C + A +F
Sbjct: 82 FTYSRFISALCSAPNNLPLIHDLLLDMHALGFVPDIWAFNTYLSFLCRHNRLETALELFH 141
Query: 293 EMSGKGFEPDVVTFTILINAFFKKGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSG 472
M +G EPDVV++TI+++A K R D A + ++ KGL PD ++ LC G
Sbjct: 142 SMPSEGREPDVVSYTIIVDALCKAQRYDEAARVWRGLTGKGLSPDFKACVALVVGLCGGG 201
Query: 473 RVDQAQNFFRDMERLRITPDVICYNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
RVD A + + + +++ YNALI+G + RV + M+ M RNGC PD VT
Sbjct: 202 RVDLAYELVVGVIKGGVKVNILVYNALIDGFCRMGRVDKAMKIKAFMSRNGCVPDLVT 259
Score = 94.4 bits (233), Expect = 3e-17
Identities = 49/151 (32%), Positives = 80/151 (52%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PDMVT+NI ++ G ++ KLL +M R PD Y + LCK ++D+A S+
Sbjct: 360 PDMVTFNILIDAFLREGSIQVVKKLLDEMTRLGILPDRIFYTAVVDHLCKTGKVDTADSV 419
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+E D +SYN ++ +C A A R+++EM G PD VTF +++ +
Sbjct: 420 FRDMVENGVNPDVISYNALVNGFCKASRVMDAMRLYDEMQRNGLYPDEVTFKLIVGGLIR 479
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMID 454
+ LA + D+M +KGL D+ L T+++
Sbjct: 480 GKKLSLACRVWDQMMEKGLTLDKHLSETLVN 510
Score = 90.5 bits (223), Expect = 4e-16
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 3/204 (1%)
Frame = +2
Query: 41 CNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLLVKTMEKRGLC-- 214
C G ++ A +L+ + + K + YN + C+ R+D A + +K R C
Sbjct: 198 CGGGRVDLAYELVVGVIKGGVKVNILVYNALIDGFCRMGRVDKA--MKIKAFMSRNGCVP 255
Query: 215 DTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGRADLAEDLL 394
D V+YNT++ C +A R+ E M G EPD ++ L+ F K D A +L
Sbjct: 256 DLVTYNTLLNYCCDEGMLDEALRLVETMERSGVEPDFYSYNELLKCFCKANMVDRAYLML 315
Query: 395 -DRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVICYNALINGLFK 571
+RM KG+ D V Y T+I CK R + F +M I PD++ +N LI+ +
Sbjct: 316 VERMQTKGMC-DVVSYNTLITAFCKVRRTRRGYELFEEMCGKGIRPDMVTFNILIDAFLR 374
Query: 572 AFRVAEGMQFYEDMQRNGCHPDEV 643
+ + ++M R G PD +
Sbjct: 375 EGSIQVVKKLLDEMTRLGILPDRI 398
>ref|XP_007227261.1| hypothetical protein PRUPE_ppa017811mg [Prunus persica]
gi|462424197|gb|EMJ28460.1| hypothetical protein
PRUPE_ppa017811mg [Prunus persica]
Length = 541
Score = 268 bits (686), Expect = 8e-70
Identities = 128/214 (59%), Positives = 158/214 (73%)
Frame = +2
Query: 5 DMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLL 184
D+VT+N+ L YCCN MLEEA KL+KKMERS +PD YSYNQ LK LC+ANR D AY L+
Sbjct: 253 DLVTHNVLLKYCCNEFMLEEAEKLMKKMERSGMEPDVYSYNQLLKGLCQANRADKAYLLM 312
Query: 185 VKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKK 364
ME +GLC+ VSYNT+I A+C A T +AY++FEEM KG PDVVTFTILI AF ++
Sbjct: 313 RTRMEPKGLCNVVSYNTIITAFCRAHRTGRAYKLFEEMGQKGTMPDVVTFTILIEAFLRE 372
Query: 365 GRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVICY 544
G +D+A LLD+M+ GL PDR+ YTT++DHLCKSG++ A + F DM I PD + +
Sbjct: 373 GSSDIANKLLDQMTVMGLLPDRIFYTTIVDHLCKSGKIAMAYSVFSDMLEKGIAPDAVSF 432
Query: 545 NALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
NALINGL KA RV+E M YE+MQ GC PDEVT
Sbjct: 433 NALINGLCKASRVSEAMHLYEEMQNRGCCPDEVT 466
Score = 111 bits (277), Expect = 2e-22
Identities = 61/215 (28%), Positives = 104/215 (48%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+V+Y I ++ C ++A + M R KPD + + LC ++D AY+L
Sbjct: 147 PDVVSYTILIDGLCKARQFDKAVDIWTSMIRKGFKPDNIACTALVVGLCDGGKVDLAYNL 206
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
++ M+ + + YNT+I +C A KA + M G E D+VT +L+
Sbjct: 207 VIGEMKGQVKFSNLMYNTLINGFCRAGRIDKAQAIKSFMKRNGCESDLVTHNVLLKYCCN 266
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+ + AE L+ +M + G+ PD Y ++ LC++ R D+A R + +V+
Sbjct: 267 EFMLEEAEKLMKKMERSGMEPDVYSYNQLLKGLCQANRADKAYLLMRTRMEPKGLCNVVS 326
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YN +I +A R + +E+M + G PD VT
Sbjct: 327 YNTIITAFCRAHRTGRAYKLFEEMGQKGTMPDVVT 361
Score = 106 bits (265), Expect = 5e-21
Identities = 61/208 (29%), Positives = 106/208 (50%)
Frame = +2
Query: 14 TYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLLVKT 193
TY+ ++ C KL++ M+R PD +++N +L LC+ NR A + +
Sbjct: 81 TYSRFISGLCKIRNFTLIEKLIRDMDRLGAVPDIWAFNIYLNLLCQENRAHFALEVFHRM 140
Query: 194 MEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGRA 373
++K D VSY +I C AR+ KA ++ M KGF+PD + T L+ G+
Sbjct: 141 VDKGREPDVVSYTILIDGLCKARQFDKAVDIWTSMIRKGFKPDNIACTALVVGLCDGGKV 200
Query: 374 DLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVICYNAL 553
DLA +L+ + + ++Y T+I+ C++GR+D+AQ M+R D++ +N L
Sbjct: 201 DLAYNLVIGEMKGQVKFSNLMYNTLINGFCRAGRIDKAQAIKSFMKRNGCESDLVTHNVL 260
Query: 554 INGLFKAFRVAEGMQFYEDMQRNGCHPD 637
+ F + E + + M+R+G PD
Sbjct: 261 LKYCCNEFMLEEAEKLMKKMERSGMEPD 288
Score = 101 bits (251), Expect = 2e-19
Identities = 58/178 (32%), Positives = 90/178 (50%), Gaps = 1/178 (0%)
Frame = +2
Query: 116 YSYNQFLKALCKANRMDSAYSLLVKTMEKRGLC-DTVSYNTMIRAYCWARETQKAYRMFE 292
++Y++F+ LCK + L++ M++ G D ++N + C A +F
Sbjct: 80 FTYSRFISGLCKIRNF-TLIEKLIRDMDRLGAVPDIWAFNIYLNLLCQENRAHFALEVFH 138
Query: 293 EMSGKGFEPDVVTFTILINAFFKKGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSG 472
M KG EPDVV++TILI+ K + D A D+ M +KG PD + T ++ LC G
Sbjct: 139 RMVDKGREPDVVSYTILIDGLCKARQFDKAVDIWTSMIRKGFKPDNIACTALVVGLCDGG 198
Query: 473 RVDQAQNFFRDMERLRITPDVICYNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
+VD A N + ++ + YN LING +A R+ + M+RNGC D VT
Sbjct: 199 KVDLAYNLVIGEMKGQVKFSNLMYNTLINGFCRAGRIDKAQAIKSFMKRNGCESDLVT 256
Score = 83.6 bits (205), Expect = 5e-14
Identities = 46/142 (32%), Positives = 72/142 (50%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VT+ I + G + A KLL +M PD Y + LCK+ ++ AYS+
Sbjct: 357 PDVVTFTILIEAFLREGSSDIANKLLDQMTVMGLLPDRIFYTTIVDHLCKSGKIAMAYSV 416
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+EK D VS+N +I C A +A ++EEM +G PD VTF ++I +
Sbjct: 417 FSDMLEKGIAPDAVSFNALINGLCKASRVSEAMHLYEEMQNRGCCPDEVTFKLIIGGLIR 476
Query: 362 KGRADLAEDLLDRMSQKGLFPD 427
+ + +A + D+M +KG D
Sbjct: 477 ENKLSVACRVWDQMMEKGFTLD 498
>ref|XP_002312667.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222852487|gb|EEE90034.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 512
Score = 263 bits (673), Expect = 3e-68
Identities = 127/215 (59%), Positives = 153/215 (71%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VTYN+ LNYCCN M EEA KLLKKME S +PD YSYNQ LKA CKAN D AY
Sbjct: 253 PDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKAYLF 312
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+V M +G CD VSYNT+I+A+C ++AY++FEEM KG PDVVTFTILI AF +
Sbjct: 313 MVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLR 372
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+G +D+A+ LLD M+ GL PDR+ YTT+IDH CKSG+V+ A + F DM ITPDV+
Sbjct: 373 EGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVS 432
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YNALING K+ RV E M YE M + G PDEVT
Sbjct: 433 YNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVT 467
Score = 91.7 bits (226), Expect = 2e-16
Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 2/217 (0%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VT+ I ++ C + A + M +PD + LC ++D AY L
Sbjct: 147 PDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYEL 206
Query: 182 LVKTMEKRGLCD--TVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAF 355
++ + GL + T+ YN +I +C A KA M MS G +PD+VT+ +L+N
Sbjct: 207 IIGVISG-GLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYC 265
Query: 356 FKKGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDV 535
+ + A LL +M + PD Y ++ CK+ D+A F + DV
Sbjct: 266 CNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFCDV 325
Query: 536 ICYNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
+ YN +I + +E+M R G PD VT
Sbjct: 326 VSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVT 362
Score = 90.5 bits (223), Expect = 4e-16
Identities = 61/235 (25%), Positives = 100/235 (42%), Gaps = 36/235 (15%)
Frame = +2
Query: 50 GMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLLVKTMEKRGLCDTVSY 229
G+++ A K+ +M S+ + YN+F+ L + +R D A+ K + +Y
Sbjct: 23 GLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSKMAPLGFSLSSFTY 82
Query: 230 NTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGRADLAEDLLDRMSQ 409
+ I C +E + ++M PD+ F I +N F++ R + A ++ RM +
Sbjct: 83 SRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRMVE 142
Query: 410 KGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPD------------------- 532
+G PD V +T +ID LCK + D A F+ +M I PD
Sbjct: 143 RGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDL 202
Query: 533 -----------------VICYNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
+ YNALI+G +A R+ + + M R GC PD VT
Sbjct: 203 AYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVT 257
Score = 81.3 bits (199), Expect = 2e-13
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 1/192 (0%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+ +NI LN E A ++ +M +PD ++ + LCK + D+A
Sbjct: 112 PDIWAFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQF 171
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMF-EEMSGKGFEPDVVTFTILINAFF 358
+ ++K D + + C + AY + +SG E + + LI+ F
Sbjct: 172 WLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFC 231
Query: 359 KKGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVI 538
+ GR D A ++ MS+ G PD V Y ++++ C ++A + ME I PDV
Sbjct: 232 RAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVY 291
Query: 539 CYNALINGLFKA 574
YN L+ KA
Sbjct: 292 SYNQLLKAHCKA 303
Score = 79.0 bits (193), Expect = 1e-12
Identities = 44/151 (29%), Positives = 77/151 (50%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VT+ I + G + A KLL M PD Y + CK+ +++ A+S+
Sbjct: 358 PDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSI 417
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+EK D VSYN +I +C + + ++E+M +G PD VT+ ++I A +
Sbjct: 418 FCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVR 477
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMID 454
+ + A + D+M ++GL DR + +I+
Sbjct: 478 ENKLSDACRVWDQMMERGLTLDRGISEMLIN 508
>ref|XP_006364563.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X1 [Solanum tuberosum]
Length = 511
Score = 258 bits (660), Expect = 8e-67
Identities = 124/215 (57%), Positives = 158/215 (73%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VTYN+ LNYCCN MLEEA KL++KME + +PD YSYNQ L+ CKANR+D AY L
Sbjct: 252 PDLVTYNVFLNYCCNELMLEEAVKLIEKMEGNGLEPDGYSYNQLLRGFCKANRLDKAYKL 311
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+V ME +GL D VSYNT+IRA C ++KAY +FEEM K PDVVTFTILI A K
Sbjct: 312 MVDKMETKGLVDVVSYNTIIRALCKTDHSKKAYNLFEEMEQKKIVPDVVTFTILIEASLK 371
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+G + +A+ L+D+M+ GLFPDRVLYT++ID+LCK+G++ A++ FRDM + PDVI
Sbjct: 372 EGNSSVAKALVDQMTSMGLFPDRVLYTSIIDNLCKTGKLGVAESIFRDMVEQGVAPDVIS 431
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YNALI+G KA RV E + YEDMQ +PDE+T
Sbjct: 432 YNALISGFCKASRVTEALSLYEDMQARDLNPDEIT 466
Score = 112 bits (281), Expect = 7e-23
Identities = 63/215 (29%), Positives = 104/215 (48%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+V+Y I ++ C G + A ++ M R +PD + + LC + R+D AY L
Sbjct: 147 PDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKACKALVFGLCGSGRVDLAYEL 206
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+ + + +T YNT+I +C A KA + M G EPD+VT+ + +N
Sbjct: 207 TLGILRGQVKFNTEIYNTLINGFCRAGRIDKAQAIKTFMRRNGCEPDLVTYNVFLNYCCN 266
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+ + A L+++M GL PD Y ++ CK+ R+D+A D + DV+
Sbjct: 267 ELMLEEAVKLIEKMEGNGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETKGLVDVVS 326
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YN +I L K + +E+M++ PD VT
Sbjct: 327 YNTIIRALCKTDHSKKAYNLFEEMEQKKIVPDVVT 361
Score = 100 bits (248), Expect = 5e-19
Identities = 62/209 (29%), Positives = 97/209 (46%)
Frame = +2
Query: 11 VTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLLVK 190
+TY+ + C + ++LL M+R P+ ++YN +L LC N +D A L+
Sbjct: 80 LTYSKFICGLCKVKNFDLISRLLNDMDRVGIVPNFWAYNMYLNLLCSENLVDIALELIRV 139
Query: 191 TMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGR 370
EK D VSY +I C A M+ M KG PD L+ GR
Sbjct: 140 MGEKGREPDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKACKALVFGLCGSGR 199
Query: 371 ADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVICYNA 550
DLA +L + + + + +Y T+I+ C++GR+D+AQ M R PD++ YN
Sbjct: 200 VDLAYELTLGILRGQVKFNTEIYNTLINGFCRAGRIDKAQAIKTFMRRNGCEPDLVTYNV 259
Query: 551 LINGLFKAFRVAEGMQFYEDMQRNGCHPD 637
+N + E ++ E M+ NG PD
Sbjct: 260 FLNYCCNELMLEEAVKLIEKMEGNGLEPD 288
Score = 99.8 bits (247), Expect = 7e-19
Identities = 61/180 (33%), Positives = 92/180 (51%), Gaps = 1/180 (0%)
Frame = +2
Query: 110 DTYSYNQFLKALCKANRMDSAYSLLVKTMEKRGLCDTV-SYNTMIRAYCWARETQKAYRM 286
++ +Y++F+ LCK D S L+ M++ G+ +YN + C A +
Sbjct: 78 NSLTYSKFICGLCKVKNFD-LISRLLNDMDRVGIVPNFWAYNMYLNLLCSENLVDIALEL 136
Query: 287 FEEMSGKGFEPDVVTFTILINAFFKKGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCK 466
M KG EPDVV++TI+I+ + GR D A ++ M +KGL PD ++ LC
Sbjct: 137 IRVMGEKGREPDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKACKALVFGLCG 196
Query: 467 SGRVDQAQNFFRDMERLRITPDVICYNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
SGRVD A + R ++ + YN LING +A R+ + M+RNGC PD VT
Sbjct: 197 SGRVDLAYELTLGILRGQVKFNTEIYNTLINGFCRAGRIDKAQAIKTFMRRNGCEPDLVT 256
Score = 80.1 bits (196), Expect = 5e-13
Identities = 43/151 (28%), Positives = 73/151 (48%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VT+ I + G A L+ +M PD Y + LCK ++ A S+
Sbjct: 357 PDVVTFTILIEASLKEGNSSVAKALVDQMTSMGLFPDRVLYTSIIDNLCKTGKLGVAESI 416
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+E+ D +SYN +I +C A +A ++E+M + PD +TF ++I +
Sbjct: 417 FRDMVEQGVAPDVISYNALISGFCKASRVTEALSLYEDMQARDLNPDEITFKLIIGGLIQ 476
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMID 454
+ +A + D+M +KG DR L T+I+
Sbjct: 477 EKNLSVACAIWDQMMEKGFTLDRDLSQTLIN 507
Score = 62.0 bits (149), Expect = 2e-07
Identities = 47/207 (22%), Positives = 78/207 (37%)
Frame = +2
Query: 17 YNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLLVKTM 196
Y ++ G++ EA ++ KM +S + + YN+ + L + + D A
Sbjct: 12 YRTRISNYVKTGLVNEALQVFDKMTQSDCRVFSIDYNRIIGVLIRTSHFDLAEGY----- 66
Query: 197 EKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGRAD 376
+ EM GF + +T++ I K D
Sbjct: 67 ------------------------------YNEMKPVGFSLNSLTYSKFICGLCKVKNFD 96
Query: 377 LAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVICYNALI 556
L LL+ M + G+ P+ Y ++ LC VD A R M PDV+ Y +I
Sbjct: 97 LISRLLNDMDRVGIVPNFWAYNMYLNLLCSENLVDIALELIRVMGEKGREPDVVSYTIVI 156
Query: 557 NGLFKAFRVAEGMQFYEDMQRNGCHPD 637
+GL + R ++ + M R G PD
Sbjct: 157 SGLCRIGRFDNAVEMWHTMIRKGLRPD 183
>ref|XP_004240634.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Solanum lycopersicum]
Length = 511
Score = 257 bits (657), Expect = 2e-66
Identities = 124/215 (57%), Positives = 159/215 (73%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VTYN+ LNYCCN MLEEA KL++KME +PD YSYNQ L+ CKANR+D AY L
Sbjct: 252 PDLVTYNVFLNYCCNELMLEEAMKLIEKMEGIGLEPDGYSYNQLLRGFCKANRLDKAYKL 311
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+V ME +GL D VSYNT+IRA C +++KAY +F+EM K PDVVTFTILI A K
Sbjct: 312 MVDKMETKGLVDVVSYNTIIRALCKTDQSKKAYILFKEMEQKKILPDVVTFTILIEASLK 371
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+G + +A+ L+D+M+ GLFPDRVLYT++ID+LCK+G++ A++ FRDM + PDVI
Sbjct: 372 EGNSSVAKALVDQMTSMGLFPDRVLYTSIIDNLCKTGKLGVAESIFRDMVEQGVAPDVIS 431
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YNALI+G KA RV E + YEDMQ G +PDE+T
Sbjct: 432 YNALISGFCKASRVTEALSLYEDMQTRGLNPDEIT 466
Score = 108 bits (270), Expect = 1e-21
Identities = 61/215 (28%), Positives = 105/215 (48%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+V+Y I ++ C G + A ++ M R +PD + + LC + ++D AY L
Sbjct: 147 PDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKACKALVFGLCGSGKVDLAYEL 206
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+ + + +T YNT+I +C A KA + M G EPD+VT+ + +N
Sbjct: 207 TLGILRGQVKFNTEIYNTLINGFCRAGRIDKAQAIKTFMKRNGCEPDLVTYNVFLNYCCN 266
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+ + A L+++M GL PD Y ++ CK+ R+D+A D + DV+
Sbjct: 267 ELMLEEAMKLIEKMEGIGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETKGLVDVVS 326
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YN +I L K + + +++M++ PD VT
Sbjct: 327 YNTIIRALCKTDQSKKAYILFKEMEQKKILPDVVT 361
Score = 98.6 bits (244), Expect = 1e-18
Identities = 60/180 (33%), Positives = 92/180 (51%), Gaps = 1/180 (0%)
Frame = +2
Query: 110 DTYSYNQFLKALCKANRMDSAYSLLVKTMEKRGLCDTV-SYNTMIRAYCWARETQKAYRM 286
++ +Y++F+ LCK D S L+ M++ G+ +YN + C A +
Sbjct: 78 NSLTYSKFICGLCKVKNFD-LISRLLNDMDRVGIVPNFWAYNMYLNLLCSENLVDIALEL 136
Query: 287 FEEMSGKGFEPDVVTFTILINAFFKKGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCK 466
M KG EPDVV++TI+I+ + GR D A ++ M +KGL PD ++ LC
Sbjct: 137 IRVMGEKGREPDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKACKALVFGLCG 196
Query: 467 SGRVDQAQNFFRDMERLRITPDVICYNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
SG+VD A + R ++ + YN LING +A R+ + M+RNGC PD VT
Sbjct: 197 SGKVDLAYELTLGILRGQVKFNTEIYNTLINGFCRAGRIDKAQAIKTFMKRNGCEPDLVT 256
Score = 97.4 bits (241), Expect = 3e-18
Identities = 61/209 (29%), Positives = 97/209 (46%)
Frame = +2
Query: 11 VTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLLVK 190
+TY+ + C + ++LL M+R P+ ++YN +L LC N +D A L+
Sbjct: 80 LTYSKFICGLCKVKNFDLISRLLNDMDRVGIVPNFWAYNMYLNLLCSENLVDIALELIRV 139
Query: 191 TMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGR 370
EK D VSY +I C A M+ M KG PD L+ G+
Sbjct: 140 MGEKGREPDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKACKALVFGLCGSGK 199
Query: 371 ADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVICYNA 550
DLA +L + + + + +Y T+I+ C++GR+D+AQ M+R PD++ YN
Sbjct: 200 VDLAYELTLGILRGQVKFNTEIYNTLINGFCRAGRIDKAQAIKTFMKRNGCEPDLVTYNV 259
Query: 551 LINGLFKAFRVAEGMQFYEDMQRNGCHPD 637
+N + E M+ E M+ G PD
Sbjct: 260 FLNYCCNELMLEEAMKLIEKMEGIGLEPD 288
Score = 80.9 bits (198), Expect = 3e-13
Identities = 44/151 (29%), Positives = 73/151 (48%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VT+ I + G A L+ +M PD Y + LCK ++ A S+
Sbjct: 357 PDVVTFTILIEASLKEGNSSVAKALVDQMTSMGLFPDRVLYTSIIDNLCKTGKLGVAESI 416
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+E+ D +SYN +I +C A +A ++E+M +G PD +TF ++I +
Sbjct: 417 FRDMVEQGVAPDVISYNALISGFCKASRVTEALSLYEDMQTRGLNPDEITFKLIIGGLIQ 476
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMID 454
+A + D+M +KG DR L T+I+
Sbjct: 477 GKNLSVACAIWDQMMEKGFTLDRDLSQTLIN 507
Score = 60.8 bits (146), Expect = 3e-07
Identities = 39/140 (27%), Positives = 60/140 (42%)
Frame = +2
Query: 218 TVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGRADLAEDLLD 397
++ YN +I A + EM GF + +T++ I K DL LL+
Sbjct: 44 SIDYNRIIGVLIRTSHFDLAEGYYNEMKPVGFSLNSLTYSKFICGLCKVKNFDLISRLLN 103
Query: 398 RMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVICYNALINGLFKAF 577
M + G+ P+ Y ++ LC VD A R M PDV+ Y +I+GL +
Sbjct: 104 DMDRVGIVPNFWAYNMYLNLLCSENLVDIALELIRVMGEKGREPDVVSYTIVISGLCRIG 163
Query: 578 RVAEGMQFYEDMQRNGCHPD 637
R ++ + M R G PD
Sbjct: 164 RFDNAVEMWHTMIRKGLRPD 183
>ref|XP_004504137.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cicer arietinum]
Length = 516
Score = 254 bits (649), Expect = 2e-65
Identities = 117/215 (54%), Positives = 157/215 (73%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VTYNI LNYCC+ ML+E KL++ MERS +PD YSYN+ LK CKAN++D AY
Sbjct: 253 PDLVTYNILLNYCCDEVMLDEVVKLVESMERSGVEPDLYSYNELLKGFCKANQVDRAYLT 312
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+VK M+ +G+CD VSYNT+I A+C AR ++ Y +FEEM KG +PDV+TFT+LI AFFK
Sbjct: 313 MVKRMQTKGMCDVVSYNTIIAAFCKARRIERGYELFEEMRRKGIQPDVITFTVLIEAFFK 372
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+G +D+A+ LLD+M+ G+ PD + YTT++D LCK+ +VD A F DM ++PDV+
Sbjct: 373 EGGSDVAKKLLDQMTTMGIVPDLIFYTTIVDRLCKAWKVDIAHGVFCDMVENGVSPDVVS 432
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YNALING KA RV + M Y++MQ G +PD VT
Sbjct: 433 YNALINGFCKASRVMDAMCLYDEMQDKGLYPDGVT 467
Score = 115 bits (287), Expect = 2e-23
Identities = 65/215 (30%), Positives = 106/215 (49%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+V+YNI +N C ++E A++ + + KPD + LC A +D AY L
Sbjct: 148 PDVVSYNIIVNALCKAKRVDEVARVWRSLIEKGLKPDFKVCAALVVGLCSAGNVDLAYEL 207
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+V + + + YN +I +C KA + MS G PD+VT+ IL+N
Sbjct: 208 IVGVINGGVKVNCLVYNALISGFCRMGRIDKALAIKGFMSRNGCVPDLVTYNILLNYCCD 267
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+ D L++ M + G+ PD Y ++ CK+ +VD+A + + DV+
Sbjct: 268 EVMLDEVVKLVESMERSGVEPDLYSYNELLKGFCKANQVDRAYLTMVKRMQTKGMCDVVS 327
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YN +I KA R+ G + +E+M+R G PD +T
Sbjct: 328 YNTIIAAFCKARRIERGYELFEEMRRKGIQPDVIT 362
Score = 100 bits (250), Expect = 3e-19
Identities = 57/189 (30%), Positives = 98/189 (51%), Gaps = 1/189 (0%)
Frame = +2
Query: 74 LLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLLVKTMEKRGL-CDTVSYNTMIRAY 250
LL+ M+ PD +++N +L LC+ N++++A L +TM +G D VSYN ++ A
Sbjct: 102 LLRDMDALGFVPDIWAFNIYLNLLCRENQLETALQLF-RTMPLKGREPDVVSYNIIVNAL 160
Query: 251 CWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGRADLAEDLLDRMSQKGLFPDR 430
C A+ + R++ + KG +PD L+ G DLA +L+ + G+ +
Sbjct: 161 CKAKRVDEVARVWRSLIEKGLKPDFKVCAALVVGLCSAGNVDLAYELIVGVINGGVKVNC 220
Query: 431 VLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVICYNALINGLFKAFRVAEGMQFYED 610
++Y +I C+ GR+D+A M R PD++ YN L+N + E ++ E
Sbjct: 221 LVYNALISGFCRMGRIDKALAIKGFMSRNGCVPDLVTYNILLNYCCDEVMLDEVVKLVES 280
Query: 611 MQRNGCHPD 637
M+R+G PD
Sbjct: 281 MERSGVEPD 289
Score = 99.0 bits (245), Expect = 1e-18
Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 36/246 (14%)
Frame = +2
Query: 17 YNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL----- 181
Y +++Y G+++ A KL +M ++ ++P + YN+F+ L + + +D A S
Sbjct: 12 YRSQISYYVKAGLIDTAIKLFDEMSQTNSRPFSIDYNRFIGVLIRHSHLDLAQSYYRRHV 71
Query: 182 ------------------------------LVKTMEKRGLC-DTVSYNTMIRAYCWARET 268
L++ M+ G D ++N + C +
Sbjct: 72 IPNGFSLTPFTYSRFIAALCSVKNFSLIDYLLRDMDALGFVPDIWAFNIYLNLLCRENQL 131
Query: 269 QKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGRADLAEDLLDRMSQKGLFPDRVLYTTM 448
+ A ++F M KG EPDVV++ I++NA K R D + + +KGL PD + +
Sbjct: 132 ETALQLFRTMPLKGREPDVVSYNIIVNALCKAKRVDEVARVWRSLIEKGLKPDFKVCAAL 191
Query: 449 IDHLCKSGRVDQAQNFFRDMERLRITPDVICYNALINGLFKAFRVAEGMQFYEDMQRNGC 628
+ LC +G VD A + + + + YNALI+G + R+ + + M RNGC
Sbjct: 192 VVGLCSAGNVDLAYELIVGVINGGVKVNCLVYNALISGFCRMGRIDKALAIKGFMSRNGC 251
Query: 629 HPDEVT 646
PD VT
Sbjct: 252 VPDLVT 257
Score = 86.3 bits (212), Expect = 8e-15
Identities = 46/151 (30%), Positives = 76/151 (50%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD++T+ + + G + A KLL +M PD Y + LCKA ++D A+ +
Sbjct: 358 PDVITFTVLIEAFFKEGGSDVAKKLLDQMTTMGIVPDLIFYTTIVDRLCKAWKVDIAHGV 417
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+E D VSYN +I +C A A +++EM KG PD VTF +++ +
Sbjct: 418 FCDMVENGVSPDVVSYNALINGFCKASRVMDAMCLYDEMQDKGLYPDGVTFKLIVGGLIR 477
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMID 454
+ + A + D+M +KG DR L T+++
Sbjct: 478 ENKISEACKVWDQMMEKGFTLDRRLSETLVN 508
>ref|XP_003531325.2| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X1 [Glycine max]
gi|571471241|ref|XP_006585252.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X2 [Glycine max]
Length = 521
Score = 254 bits (649), Expect = 2e-65
Identities = 114/215 (53%), Positives = 156/215 (72%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VTYNI LNYCC GM++EA +L++ MERS +PD YSYN+ LK CKAN +D A+ +
Sbjct: 257 PDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLM 316
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+V+ M+ +G+CD VSYNT+I A+C AR T+K Y +FEEM GKG PD+VTF ILI+AF +
Sbjct: 317 MVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLR 376
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+G + + LLD M++ + PD + YT ++DHLCK+G+VD A + FRDM + PDVI
Sbjct: 377 EGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVIS 436
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YNAL+NG K RV + M +++MQ G +PDEVT
Sbjct: 437 YNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVT 471
Score = 120 bits (300), Expect = 5e-25
Identities = 67/215 (31%), Positives = 111/215 (51%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+V+Y I ++ CN +EAAK+ +++ PD + + LC R+D AY L
Sbjct: 152 PDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYEL 211
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+V ++ +++ YN +I +C KA ++ MS G PD+VT+ IL+N +
Sbjct: 212 VVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCE 271
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+G D A L++ M + G+ PD Y ++ CK+ VD+A + + + DV+
Sbjct: 272 EGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVS 331
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YN +I KA R +G + +E+M G PD VT
Sbjct: 332 YNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVT 366
Score = 109 bits (273), Expect = 6e-22
Identities = 66/211 (31%), Positives = 105/211 (49%), Gaps = 3/211 (1%)
Frame = +2
Query: 14 TYNIELNYCC---NNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLL 184
TY+ ++ C NN L LL M+ PD +++N +L LC+ NR+++A L
Sbjct: 83 TYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELF 142
Query: 185 VKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKK 364
K D VSY +I A C A+ +A +++ + KG PD L+
Sbjct: 143 HSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSG 202
Query: 365 GRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVICY 544
GR DLA +L+ + + G+ + ++Y +ID C+ GRVD+A M R PD++ Y
Sbjct: 203 GRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTY 262
Query: 545 NALINGLFKAFRVAEGMQFYEDMQRNGCHPD 637
N L+N + V E ++ E M+R+G PD
Sbjct: 263 NILLNYCCEEGMVDEAVRLVETMERSGVEPD 293
Score = 97.4 bits (241), Expect = 3e-18
Identities = 59/180 (32%), Positives = 91/180 (50%), Gaps = 3/180 (1%)
Frame = +2
Query: 116 YSYNQFLKALCKANR---MDSAYSLLVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRM 286
++Y++F+ ALC A + +SLL+ + D ++NT + C + A +
Sbjct: 82 FTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALEL 141
Query: 287 FEEMSGKGFEPDVVTFTILINAFFKKGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCK 466
F M KG +PDVV++TI+I+A R D A + R+ KGL PD ++ LC
Sbjct: 142 FHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCS 201
Query: 467 SGRVDQAQNFFRDMERLRITPDVICYNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
GRVD A + + + + + YNALI+G + RV + M+ M R GC PD VT
Sbjct: 202 GGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVT 261
Score = 89.0 bits (219), Expect = 1e-15
Identities = 46/156 (29%), Positives = 79/156 (50%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PDMVT+NI ++ G KLL +M + + PD Y + LCK ++D A+S+
Sbjct: 362 PDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSV 421
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+E D +SYN ++ +C A +F+EM KG PD VT+ +++ +
Sbjct: 422 FRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIR 481
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKS 469
+ LA + D+M ++G +R L T+++ + S
Sbjct: 482 GKKISLACRVWDQMMERGFTLNRHLSETLVNAIQSS 517
>ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530468|gb|EEF32352.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 554
Score = 254 bits (649), Expect = 2e-65
Identities = 123/215 (57%), Positives = 154/215 (71%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VTYN+ LNY C+ ML++A KLLK MERS +PD YSYNQ LK +CK N D AY L
Sbjct: 253 PDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLL 312
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+ M +GLCD VSYNT+I+A+C +T AY++FEEM KG PDVVTFTI I AF
Sbjct: 313 MTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLG 372
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
KG ++A+ LLD+M++ GL PD + YTT+IDHLCKSG+V+ A + F DM I+PDVI
Sbjct: 373 KGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVIS 432
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
+NALING K RV+E M YE+MQ G +PDEVT
Sbjct: 433 FNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVT 467
Score = 103 bits (256), Expect = 6e-20
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 1/216 (0%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VTY I ++ C + A + + M PD + + LC ++D AY L
Sbjct: 147 PDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYEL 206
Query: 182 LVKTMEK-RGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFF 358
++ M+ R T+ YN +I +C A KA + M G EPD+VT+ + +N F
Sbjct: 207 IIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFC 266
Query: 359 KKGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVI 538
+ D A+ LL M + G+ PD Y ++ +CK D+A + + DV+
Sbjct: 267 DELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVV 326
Query: 539 CYNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YN +I K + +E+M + G PD VT
Sbjct: 327 SYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVT 362
Score = 90.1 bits (222), Expect = 5e-16
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 36/235 (15%)
Frame = +2
Query: 50 GMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLLVKTMEKRGLCDTVSY 229
G++++A ++ +M +S + + YN+F+ L +R D A + + + +Y
Sbjct: 23 GLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTRGFSLSSFTY 82
Query: 230 NTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGRADLAEDLLDRMSQ 409
+ I C + + +M PD+ F I ++ F +GR DLA ++ +++ +
Sbjct: 83 SRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVK 142
Query: 410 KGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPD------------------- 532
G PD V YT +I +CK + D A F+RDM +PD
Sbjct: 143 NGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDL 202
Query: 533 -----------------VICYNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
+ YNALI+G +A R+ + M+RNGC PD VT
Sbjct: 203 AYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVT 257
Score = 84.7 bits (208), Expect = 2e-14
Identities = 43/150 (28%), Positives = 75/150 (50%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VT+ I + G A KLL +M PD Y + LCK+ +++ A+S+
Sbjct: 358 PDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSI 417
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+E+ D +S+N +I +C +A ++EEM +G PD VT+ ++I +
Sbjct: 418 FCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIE 477
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMI 451
+ + +A + +M KG DR + T+I
Sbjct: 478 EKKISIACMVWGQMMDKGFTLDRAIAQTLI 507
Score = 63.9 bits (154), Expect = 4e-08
Identities = 39/140 (27%), Positives = 58/140 (41%)
Frame = +2
Query: 227 YNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGRADLAEDLLDRMS 406
Y + I Y A KA ++F+EMS + + I R DLA +M
Sbjct: 12 YRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMG 71
Query: 407 QKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVICYNALINGLFKAFRVA 586
+G Y+ I LCK DME L PD+ +N ++ LF R+
Sbjct: 72 TRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRID 131
Query: 587 EGMQFYEDMQRNGCHPDEVT 646
++ +E + +NG PD VT
Sbjct: 132 LALEVFEKIVKNGRKPDVVT 151
Score = 59.3 bits (142), Expect = 1e-06
Identities = 40/172 (23%), Positives = 66/172 (38%)
Frame = +2
Query: 122 YNQFLKALCKANRMDSAYSLLVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMS 301
Y + KA +D A + + + ++ YN I A + +M
Sbjct: 12 YRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMG 71
Query: 302 GKGFEPDVVTFTILINAFFKKGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVD 481
+GF T++ I K ++LL M PD + + L GR+D
Sbjct: 72 TRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRID 131
Query: 482 QAQNFFRDMERLRITPDVICYNALINGLFKAFRVAEGMQFYEDMQRNGCHPD 637
A F + + PDV+ Y +I+G+ K + +QF+ DM G PD
Sbjct: 132 LALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPD 183
>gb|EYU30611.1| hypothetical protein MIMGU_mgv1a020771mg [Mimulus guttatus]
Length = 515
Score = 254 bits (648), Expect = 2e-65
Identities = 122/215 (56%), Positives = 156/215 (72%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VT+N+ LNYCCN MLEEA KL+ KMERS +PD YSYN+ LK LCKA+R+D AY L
Sbjct: 252 PDLVTHNVLLNYCCNALMLEEAHKLIAKMERSGMEPDIYSYNELLKGLCKASRVDKAYLL 311
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
LV ME +G D VSYNT++ A C A + +AY++ EM KG PDV+TFTILI+AF K
Sbjct: 312 LVDKMEAKGFVDVVSYNTIVSALCKAGRSGEAYKLLGEMGRKGVAPDVITFTILIDAFLK 371
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
KG + +A+DLLD+M++ LFP LYTT++DHLCK+GR+ A+ F DM I PDV+
Sbjct: 372 KGNSVIAKDLLDQMTKMNLFPSLELYTTIVDHLCKTGRIKAARGIFHDMVEQGIRPDVVS 431
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YNALI G +AF V+E + +E MQ +G HPDEVT
Sbjct: 432 YNALICGCCRAFEVSEALHLFEQMQSSGVHPDEVT 466
Score = 116 bits (291), Expect = 5e-24
Identities = 67/215 (31%), Positives = 106/215 (49%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+V+Y I ++ C + +EA +L K M + PD + + LC + ++D AY L
Sbjct: 147 PDVVSYTIMISGFCRIKLYDEAIELWKVMIKKGLNPDNEACRALVLGLCDSGKVDLAYEL 206
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
V M ++ + V YN +I +C KA + M G EPD+VT +L+N
Sbjct: 207 TVGDMREKVSFNVVIYNALICGFCRVGRIDKALAIKNFMRRNGCEPDLVTHNVLLNYCCN 266
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+ A L+ +M + G+ PD Y ++ LCK+ RVD+A D + DV+
Sbjct: 267 ALMLEEAHKLIAKMERSGMEPDIYSYNELLKGLCKASRVDKAYLLLVDKMEAKGFVDVVS 326
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YN +++ L KA R E + +M R G PD +T
Sbjct: 327 YNTIVSALCKAGRSGEAYKLLGEMGRKGVAPDVIT 361
Score = 92.8 bits (229), Expect = 8e-17
Identities = 58/180 (32%), Positives = 94/180 (52%), Gaps = 1/180 (0%)
Frame = +2
Query: 110 DTYSYNQFLKALCKANRMDSAYSLLVKTMEKRGLC-DTVSYNTMIRAYCWARETQKAYRM 286
++++Y++F+ LC+ + S L M+ G+ D ++N + C A ++
Sbjct: 78 NSFTYSRFISGLCELRNFE-LISRLFADMDSLGIVPDIWAFNIYMYLLCSESLVDDALKI 136
Query: 287 FEEMSGKGFEPDVVTFTILINAFFKKGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCK 466
M KG EPDVV++TI+I+ F + D A +L M +KGL PD ++ LC
Sbjct: 137 LGLMGEKGREPDVVSYTIMISGFCRIKLYDEAIELWKVMIKKGLNPDNEACRALVLGLCD 196
Query: 467 SGRVDQAQNFFRDMERLRITPDVICYNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
SG+VD A R +++ +V+ YNALI G + R+ + + M+RNGC PD VT
Sbjct: 197 SGKVDLAYELTVGDMREKVSFNVVIYNALICGFCRVGRIDKALAIKNFMRRNGCEPDLVT 256
Score = 91.7 bits (226), Expect = 2e-16
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 1/209 (0%)
Frame = +2
Query: 14 TYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLLVKT 193
TY+ ++ C E ++L M+ PD +++N ++ LC + +D A +L
Sbjct: 81 TYSRFISGLCELRNFELISRLFADMDSLGIVPDIWAFNIYMYLLCSESLVDDALKILGLM 140
Query: 194 MEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGRA 373
EK D VSY MI +C + +A +++ M KG PD L+ G+
Sbjct: 141 GEKGREPDVVSYTIMISGFCRIKLYDEAIELWKVMIKKGLNPDNEACRALVLGLCDSGKV 200
Query: 374 DLAEDL-LDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVICYNA 550
DLA +L + M +K F + V+Y +I C+ GR+D+A M R PD++ +N
Sbjct: 201 DLAYELTVGDMREKVSF-NVVIYNALICGFCRVGRIDKALAIKNFMRRNGCEPDLVTHNV 259
Query: 551 LINGLFKAFRVAEGMQFYEDMQRNGCHPD 637
L+N A + E + M+R+G PD
Sbjct: 260 LLNYCCNALMLEEAHKLIAKMERSGMEPD 288
Score = 82.0 bits (201), Expect = 1e-13
Identities = 48/151 (31%), Positives = 73/151 (48%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD++T+ I ++ G A LL +M + P Y + LCK R+ +A +
Sbjct: 357 PDVITFTILIDAFLKKGNSVIAKDLLDQMTKMNLFPSLELYTTIVDHLCKTGRIKAARGI 416
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+E+ D VSYN +I C A E +A +FE+M G PD VTF ++I K
Sbjct: 417 FHDMVEQGIRPDVVSYNALICGCCRAFEVSEALHLFEQMQSSGVHPDEVTFKLIIRGLIK 476
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMID 454
+ + LA + D+M +KG D T+ID
Sbjct: 477 EKKLPLACGMWDQMMEKGFTLDSYSSETLID 507
>gb|EXB82495.1| hypothetical protein L484_027670 [Morus notabilis]
Length = 513
Score = 253 bits (645), Expect = 5e-65
Identities = 122/215 (56%), Positives = 157/215 (73%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VTYN+ L YCC+ ML+EA KL+ MER KPD+YSYN+ LK LC+A+R D AY L
Sbjct: 252 PDLVTYNVLLIYCCDKLMLDEANKLINTMERIGMKPDSYSYNKLLKGLCRAHRPDKAYLL 311
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+V +ME +GL + VSYNT+I A+C ++AY++FEEM KG EPDVVTFTILI AF
Sbjct: 312 MVDSMESKGLANVVSYNTIIGAFCKLLRVRRAYQLFEEMRQKGIEPDVVTFTILIKAFLS 371
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
G +D+A+ LLD+M+ GL PD + YT ++DHLCK+G++ A + F DM ITPDVI
Sbjct: 372 VGSSDVAKRLLDQMTGMGLLPDCLFYTIIVDHLCKAGKIGMAHSVFSDMVERGITPDVIS 431
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YNA+INGL KAFRV+E + YE+MQ G PDEVT
Sbjct: 432 YNAIINGLCKAFRVSEAVHLYEEMQARGLCPDEVT 466
Score = 113 bits (282), Expect = 6e-23
Identities = 65/215 (30%), Positives = 106/215 (49%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VTY I ++ C + A + M + PDT + + LC+ ++D AY L
Sbjct: 147 PDVVTYTILIDGLCKAWKFDAAVEAWCGMIKKGFVPDTIACTALVVGLCEGGKVDLAYEL 206
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
V ++ R + + YN++I +C A KA + + M G EPD+VT+ +L+
Sbjct: 207 TVGALKGRVKFNNLIYNSLISGFCRAGRIDKAQVIKDFMKRDGCEPDLVTYNVLLIYCCD 266
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
K D A L++ M + G+ PD Y ++ LC++ R D+A D + +V+
Sbjct: 267 KLMLDEANKLINTMERIGMKPDSYSYNKLLKGLCRAHRPDKAYLLMVDSMESKGLANVVS 326
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YN +I K RV Q +E+M++ G PD VT
Sbjct: 327 YNTIIGAFCKLLRVRRAYQLFEEMRQKGIEPDVVT 361
Score = 108 bits (270), Expect = 1e-21
Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 35/245 (14%)
Frame = +2
Query: 17 YNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSA-------- 172
Y + YC G+++ A +L +M S + + YN+F+ L + +R+D A
Sbjct: 12 YRSRIAYCVKTGLIDHAVQLFDEMSHSDCRVFSVDYNRFIGVLARHSRLDLAEHYYHKMA 71
Query: 173 ---YSL-----------------------LVKTMEKRG-LCDTVSYNTMIRAYCWARETQ 271
+SL L++ M+K G + D ++N + C Q
Sbjct: 72 PQGFSLYPFTYSRFISALCAVKNFLLVEKLLEDMDKLGCIPDIWAFNIYLNVLCGEHRVQ 131
Query: 272 KAYRMFEEMSGKGFEPDVVTFTILINAFFKKGRADLAEDLLDRMSQKGLFPDRVLYTTMI 451
A +F M +G EPDVVT+TILI+ K + D A + M +KG PD + T ++
Sbjct: 132 LALEVFRRMVERGREPDVVTYTILIDGLCKAWKFDAAVEAWCGMIKKGFVPDTIACTALV 191
Query: 452 DHLCKSGRVDQAQNFFRDMERLRITPDVICYNALINGLFKAFRVAEGMQFYEDMQRNGCH 631
LC+ G+VD A + R+ + + YN+LI+G +A R+ + + M+R+GC
Sbjct: 192 VGLCEGGKVDLAYELTVGALKGRVKFNNLIYNSLISGFCRAGRIDKAQVIKDFMKRDGCE 251
Query: 632 PDEVT 646
PD VT
Sbjct: 252 PDLVT 256
Score = 85.5 bits (210), Expect = 1e-14
Identities = 48/151 (31%), Positives = 78/151 (51%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VT+ I + + G + A +LL +M PD Y + LCKA ++ A+S+
Sbjct: 357 PDVVTFTILIKAFLSVGSSDVAKRLLDQMTGMGLLPDCLFYTIIVDHLCKAGKIGMAHSV 416
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+E+ D +SYN +I C A +A ++EEM +G PD VTF ++I K
Sbjct: 417 FSDMVERGITPDVISYNAIINGLCKAFRVSEAVHLYEEMQARGLCPDEVTFKLIIGGLIK 476
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMID 454
+ + LA + D+M +KG + L T+I+
Sbjct: 477 ENKLPLACRVWDQMMEKGFTLEPALSETLIN 507
Score = 61.2 bits (147), Expect = 3e-07
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD + Y I +++ C G + A + M PD SYN + LCKA R+ A
Sbjct: 392 PDCLFYTIIVDHLCKAGKIGMAHSVFSDMVERGITPDVISYNAIINGLCKAFRVSEAVH- 450
Query: 182 LVKTMEKRGLC-DTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFF 358
L + M+ RGLC D V++ +I + A R++++M KGF + LINA
Sbjct: 451 LYEEMQARGLCPDEVTFKLIIGGLIKENKLPLACRVWDQMMEKGFTLEPALSETLINAIN 510
Query: 359 KK 364
K
Sbjct: 511 SK 512
>ref|XP_004310156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 516
Score = 252 bits (644), Expect = 6e-65
Identities = 121/215 (56%), Positives = 156/215 (72%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VT+N+ LNYCCN MLEEA KL+++ME+ K D YSYN FLK LCK NR + AY
Sbjct: 253 PDLVTHNVLLNYCCNEFMLEEAEKLMRQMEKIGMKLDAYSYNGFLKGLCKDNRPEKAYLF 312
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+ ME +GLC+ VS+NT+I A C +T++AY++F+EM KG PDVVTFTILI AF +
Sbjct: 313 MKNMMEPKGLCNVVSFNTIIMACCKGGQTRRAYKLFQEMFQKGILPDVVTFTILIGAFLR 372
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+G +D+A+ LLD+M+ L PDR+ YTT+IDHLCKSG++ A + F DM IT DV+
Sbjct: 373 EGSSDVAKKLLDQMTGMDLLPDRIFYTTIIDHLCKSGKIAMACDMFNDMLEKGITADVVL 432
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YNALI+GL +A RV E M YE+MQ GC PDEVT
Sbjct: 433 YNALISGLCRASRVTEAMHLYEEMQTRGCFPDEVT 467
Score = 105 bits (262), Expect = 1e-20
Identities = 61/208 (29%), Positives = 102/208 (49%)
Frame = +2
Query: 14 TYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLLVKT 193
TY+ ++ CN KLL+ M+R + PD +++N +L LC+ NR+ A + +
Sbjct: 82 TYSRFISGLCNVNNFTLIEKLLRDMDRLGSVPDIWAFNIYLNLLCQENRIHYALEVFDRM 141
Query: 194 MEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGRA 373
+K D VSY +I C A A ++ M KGF PD + T L+ G+
Sbjct: 142 ADKGREPDVVSYTIVIHGLCKAGRFDNAVEIWNGMISKGFRPDTIACTALVVGLCGGGKV 201
Query: 374 DLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVICYNAL 553
DLA DL+ + G+ + ++Y +I C++ R+D+AQ M+R PD++ +N L
Sbjct: 202 DLAYDLVIGEMKGGVEFNNLIYNALISGFCRARRIDKAQAIKLFMKRNGCKPDLVTHNVL 261
Query: 554 INGLFKAFRVAEGMQFYEDMQRNGCHPD 637
+N F + E + M++ G D
Sbjct: 262 LNYCCNEFMLEEAEKLMRQMEKIGMKLD 289
Score = 102 bits (255), Expect = 8e-20
Identities = 59/215 (27%), Positives = 105/215 (48%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+V+Y I ++ C G + A ++ M +PDT + + LC ++D AY L
Sbjct: 148 PDVVSYTIVIHGLCKAGRFDNAVEIWNGMISKGFRPDTIACTALVVGLCGGGKVDLAYDL 207
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
++ M+ + + YN +I +C AR KA + M G +PD+VT +L+N
Sbjct: 208 VIGEMKGGVEFNNLIYNALISGFCRARRIDKAQAIKLFMKRNGCKPDLVTHNVLLNYCCN 267
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+ + AE L+ +M + G+ D Y + LCK R ++A F ++M + +V+
Sbjct: 268 EFMLEEAEKLMRQMEKIGMKLDAYSYNGFLKGLCKDNRPEKAYLFMKNMMEPKGLCNVVS 327
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
+N +I K + + +++M + G PD VT
Sbjct: 328 FNTIIMACCKGGQTRRAYKLFQEMFQKGILPDVVT 362
Score = 102 bits (254), Expect = 1e-19
Identities = 59/178 (33%), Positives = 95/178 (53%), Gaps = 1/178 (0%)
Frame = +2
Query: 116 YSYNQFLKALCKANRMDSAYSLLVKTMEKRG-LCDTVSYNTMIRAYCWARETQKAYRMFE 292
++Y++F+ LC N LL + M++ G + D ++N + C A +F+
Sbjct: 81 FTYSRFISGLCNVNNFTLIEKLL-RDMDRLGSVPDIWAFNIYLNLLCQENRIHYALEVFD 139
Query: 293 EMSGKGFEPDVVTFTILINAFFKKGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSG 472
M+ KG EPDVV++TI+I+ K GR D A ++ + M KG PD + T ++ LC G
Sbjct: 140 RMADKGREPDVVSYTIVIHGLCKAGRFDNAVEIWNGMISKGFRPDTIACTALVVGLCGGG 199
Query: 473 RVDQAQNFFRDMERLRITPDVICYNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
+VD A + + + + + YNALI+G +A R+ + M+RNGC PD VT
Sbjct: 200 KVDLAYDLVIGEMKGGVEFNNLIYNALISGFCRARRIDKAQAIKLFMKRNGCKPDLVT 257
Score = 94.0 bits (232), Expect = 4e-17
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 1/205 (0%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+ +NI LN C + A ++ +M +PD SY + LCKA R D+A +
Sbjct: 113 PDIWAFNIYLNLLCQENRIHYALEVFDRMADKGREPDVVSYTIVIHGLCKAGRFDNAVEI 172
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRM-FEEMSGKGFEPDVVTFTILINAFF 358
+ K DT++ ++ C + AY + EM G G E + + + LI+ F
Sbjct: 173 WNGMISKGFRPDTIACTALVVGLCGGGKVDLAYDLVIGEMKG-GVEFNNLIYNALISGFC 231
Query: 359 KKGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVI 538
+ R D A+ + M + G PD V + ++++ C +++A+ R ME++ + D
Sbjct: 232 RARRIDKAQAIKLFMKRNGCKPDLVTHNVLLNYCCNEFMLEEAEKLMRQMEKIGMKLDAY 291
Query: 539 CYNALINGLFKAFRVAEGMQFYEDM 613
YN + GL K R + F ++M
Sbjct: 292 SYNGFLKGLCKDNRPEKAYLFMKNM 316
Score = 88.2 bits (217), Expect = 2e-15
Identities = 50/151 (33%), Positives = 74/151 (49%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VT+ I + G + A KLL +M PD Y + LCK+ ++ A +
Sbjct: 358 PDVVTFTILIGAFLREGSSDVAKKLLDQMTGMDLLPDRIFYTTIIDHLCKSGKIAMACDM 417
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+EK D V YN +I C A +A ++EEM +G PD VT+ ++I K
Sbjct: 418 FNDMLEKGITADVVLYNALISGLCRASRVTEAMHLYEEMQTRGCFPDEVTYKVVIGGLIK 477
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMID 454
R +A + D M +KG DRVL T+I+
Sbjct: 478 DKRLSVACGVWDEMMEKGFTLDRVLSETLIN 508
Score = 62.0 bits (149), Expect = 2e-07
Identities = 47/209 (22%), Positives = 79/209 (37%)
Frame = +2
Query: 17 YNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLLVKTM 196
Y + + G+++ A + +M +S + + YN+F+ L K +R D A
Sbjct: 13 YRSRMTHYVKTGLIDHALHVFDEMTQSNCRVFSVDYNRFIGVLVKHSRYDLAE------- 65
Query: 197 EKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGRAD 376
+ EM+ +GF T++ I+
Sbjct: 66 ----------------------------HYYYEMAPQGFSLTPFTYSRFISGLCNVNNFT 97
Query: 377 LAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVICYNALI 556
L E LL M + G PD + ++ LC+ R+ A F M PDV+ Y +I
Sbjct: 98 LIEKLLRDMDRLGSVPDIWAFNIYLNLLCQENRIHYALEVFDRMADKGREPDVVSYTIVI 157
Query: 557 NGLFKAFRVAEGMQFYEDMQRNGCHPDEV 643
+GL KA R ++ + M G PD +
Sbjct: 158 HGLCKAGRFDNAVEIWNGMISKGFRPDTI 186
Score = 56.6 bits (135), Expect = 6e-06
Identities = 36/140 (25%), Positives = 57/140 (40%)
Frame = +2
Query: 227 YNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGRADLAEDLLDRMS 406
Y + + Y A +F+EM+ V + I K R DLAE M+
Sbjct: 13 YRSRMTHYVKTGLIDHALHVFDEMTQSNCRVFSVDYNRFIGVLVKHSRYDLAEHYYYEMA 72
Query: 407 QKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVICYNALINGLFKAFRVA 586
+G Y+ I LC + RDM+RL PD+ +N +N L + R+
Sbjct: 73 PQGFSLTPFTYSRFISGLCNVNNFTLIEKLLRDMDRLGSVPDIWAFNIYLNLLCQENRIH 132
Query: 587 EGMQFYEDMQRNGCHPDEVT 646
++ ++ M G PD V+
Sbjct: 133 YALEVFDRMADKGREPDVVS 152
>ref|XP_007044848.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
cacao] gi|590695292|ref|XP_007044849.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao] gi|590695295|ref|XP_007044850.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao] gi|590695299|ref|XP_007044851.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao] gi|508708783|gb|EOY00680.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao] gi|508708784|gb|EOY00681.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao] gi|508708785|gb|EOY00682.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao] gi|508708786|gb|EOY00683.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao]
Length = 516
Score = 251 bits (642), Expect = 1e-64
Identities = 122/215 (56%), Positives = 150/215 (69%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VTYN+ LNYCCN MLEEAAKL+KKMERS PD Y YNQ +K C ANR D A L
Sbjct: 253 PDLVTYNVLLNYCCNELMLEEAAKLVKKMERSGIGPDVYGYNQMIKGFCNANRPDKALLL 312
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+V ME GL D VS+NT+I+A+C KAY++FEEM KG PDVVTFT LI A
Sbjct: 313 MVNKMEANGLADAVSHNTIIKAFCKGGHIGKAYKLFEEMGRKGIAPDVVTFTTLIKACLT 372
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+G +D+A+ LLDRMS GL PD + YT +IDHLCK+G+V+ A + F DM + + PDV+
Sbjct: 373 EGSSDIAKALLDRMSGMGLLPDCIFYTAIIDHLCKNGKVEMAHSVFDDMIKQGVNPDVVS 432
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YNALING K+ R +E + YE+MQ G PDEVT
Sbjct: 433 YNALINGFCKSNRASEAIHLYEEMQTRGFSPDEVT 467
Score = 105 bits (262), Expect = 1e-20
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 1/216 (0%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VTY I ++ C G + A ++M +PD + + LC ++D AY L
Sbjct: 147 PDVVTYTIMIDGLCKAGKFDNAVGFWREMVGKGFRPDNKACCALVVGLCDGGKVDLAYEL 206
Query: 182 LVKTMEKRGL-CDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFF 358
+V+ ++ + T+ YN +I +C R KA + M+ G EPD+VT+ +L+N
Sbjct: 207 VVEVIKGGDIEFSTLLYNALISGFCRIRRIDKAQAIKLFMTKNGCEPDLVTYNVLLNYCC 266
Query: 359 KKGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVI 538
+ + A L+ +M + G+ PD Y MI C + R D+A + D +
Sbjct: 267 NELMLEEAAKLVKKMERSGIGPDVYGYNQMIKGFCNANRPDKALLLMVNKMEANGLADAV 326
Query: 539 CYNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
+N +I K + + + +E+M R G PD VT
Sbjct: 327 SHNTIIKAFCKGGHIGKAYKLFEEMGRKGIAPDVVT 362
Score = 92.0 bits (227), Expect = 1e-16
Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 36/246 (14%)
Frame = +2
Query: 17 YNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLLVKTM 196
Y ++ NG+ +A + +M +S + YN+F+ L + +R D A +
Sbjct: 12 YRAHISRLVKNGLTNQAISMFDQMTQSDCRVFGLDYNRFIGVLLRDSRFDLAEYYYFQMF 71
Query: 197 EKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGRAD 376
+ +Y+ I A C + + +M + PD+ F I +N ++ + +
Sbjct: 72 PQGFSLTPFTYSRFISALCPVKNFNFIELLLNDMDKLNYVPDIWAFNIYLNLLCREKKIE 131
Query: 377 LAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPD-------- 532
LA ++ + +KG PD V YT MID LCK+G+ D A F+R+M PD
Sbjct: 132 LALEVFHSLVKKGRDPDVVTYTIMIDGLCKAGKFDNAVGFWREMVGKGFRPDNKACCALV 191
Query: 533 ----------------------------VICYNALINGLFKAFRVAEGMQFYEDMQRNGC 628
+ YNALI+G + R+ + M +NGC
Sbjct: 192 VGLCDGGKVDLAYELVVEVIKGGDIEFSTLLYNALISGFCRIRRIDKAQAIKLFMTKNGC 251
Query: 629 HPDEVT 646
PD VT
Sbjct: 252 EPDLVT 257
Score = 87.8 bits (216), Expect = 3e-15
Identities = 48/159 (30%), Positives = 80/159 (50%), Gaps = 2/159 (1%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VT+ + C G + A LL +M PD Y + LCK +++ A+S+
Sbjct: 358 PDVVTFTTLIKACLTEGSSDIAKALLDRMSGMGLLPDCIFYTAIIDHLCKNGKVEMAHSV 417
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+++ D VSYN +I +C + +A ++EEM +GF PD VTF ++I +
Sbjct: 418 FDDMIKQGVNPDVVSYNALINGFCKSNRASEAIHLYEEMQTRGFSPDEVTFKLIIGGLIR 477
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMID--HLCKSG 472
+ + A + D+M +KG D + T+I+ H SG
Sbjct: 478 EKKLSKACKVWDQMMEKGFTLDGAVSETLINAIHSVDSG 516
>ref|XP_006483972.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X1 [Citrus sinensis]
gi|568860947|ref|XP_006483973.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X2 [Citrus sinensis]
Length = 517
Score = 245 bits (626), Expect = 7e-63
Identities = 122/215 (56%), Positives = 153/215 (71%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VTYN LNY C+ ML+EA KL+ +ME +PD YSYNQ LK LC +N++D AY
Sbjct: 252 PDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMF 311
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+VK ME +GL D VSYNT+I A+C +T++AY++FEEM +G E DVVTFTILI AF +
Sbjct: 312 MVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEEMRRRGIELDVVTFTILIKAFLR 371
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+G + +AE LL++M L PDR+LYTT+ID LCKS + A F DM ITPDVI
Sbjct: 372 EGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVIS 431
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YNALINGL K+ RV+E M YE+MQ G HPDEVT
Sbjct: 432 YNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVT 466
Score = 102 bits (253), Expect = 1e-19
Identities = 60/215 (27%), Positives = 99/215 (46%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD VTY I ++ C ++A + + M + KPD + + LC ++D AY L
Sbjct: 147 PDFVTYTIVIDGLCKAKKFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYEL 206
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
V M+ + + YN +I +C +A + M G EPD+VT+ ++N +
Sbjct: 207 TVGAMKGKVEFGVLIYNALISGFCRTGRICRAMAIKSFMKRNGCEPDLVTYNAILNYYCD 266
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+ D AE L+ M G+ PD Y ++ LC S ++D+A F + D +
Sbjct: 267 EVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVS 326
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YN +I K + + +E+M+R G D VT
Sbjct: 327 YNTVIEAFCKGGQTRRAYKLFEEMRRRGIELDVVT 361
Score = 97.1 bits (240), Expect = 4e-18
Identities = 66/246 (26%), Positives = 105/246 (42%), Gaps = 36/246 (14%)
Frame = +2
Query: 17 YNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLLVKTM 196
Y +++ G++++A + +M +S + + YN+F+ L + +R D + M
Sbjct: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLV-QFYYQQM 70
Query: 197 EKRGLCDT-VSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGRA 373
G T +Y+ I C + + + M G+ PD+ F I +N F + R
Sbjct: 71 HPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLGYLPDIWAFNIYLNLLFHENRI 130
Query: 374 DLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPD------- 532
DLA ++ +M KG PD V YT +ID LCK+ + D+A + M I PD
Sbjct: 131 DLALEVFHKMVSKGREPDFVTYTIVIDGLCKAKKFDKAVQAWEHMIENGIKPDNKACAAL 190
Query: 533 ----------------------------VICYNALINGLFKAFRVAEGMQFYEDMQRNGC 628
V+ YNALI+G + R+ M M+RNGC
Sbjct: 191 VVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRICRAMAIKSFMKRNGC 250
Query: 629 HPDEVT 646
PD VT
Sbjct: 251 EPDLVT 256
Score = 88.2 bits (217), Expect = 2e-15
Identities = 46/150 (30%), Positives = 76/150 (50%)
Frame = +2
Query: 5 DMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLL 184
D+VT+ I + G A KLL +M PD Y + LCK+ + +AY +
Sbjct: 358 DVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVF 417
Query: 185 VKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKK 364
+ +E+ D +SYN +I C + +A ++EEM +G PD VTF +LI ++
Sbjct: 418 LDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQE 477
Query: 365 GRADLAEDLLDRMSQKGLFPDRVLYTTMID 454
+ +LA L D+M +KG D+ + +I+
Sbjct: 478 KKLELACRLWDQMMEKGFTLDKTVSAALIE 507
Score = 83.2 bits (204), Expect = 6e-14
Identities = 52/188 (27%), Positives = 89/188 (47%)
Frame = +2
Query: 74 LLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLLVKTMEKRGLCDTVSYNTMIRAYC 253
LL M++ PD +++N +L L NR+D A + K + K D V+Y +I C
Sbjct: 101 LLDNMDKLGYLPDIWAFNIYLNLLFHENRIDLALEVFHKMVSKGREPDFVTYTIVIDGLC 160
Query: 254 WARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGRADLAEDLLDRMSQKGLFPDRV 433
A++ KA + +E M G +PD L+ G+ DLA +L + + +
Sbjct: 161 KAKKFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVL 220
Query: 434 LYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVICYNALINGLFKAFRVAEGMQFYEDM 613
+Y +I C++GR+ +A M+R PD++ YNA++N + E + +M
Sbjct: 221 IYNALISGFCRTGRICRAMAIKSFMKRNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEM 280
Query: 614 QRNGCHPD 637
+ G PD
Sbjct: 281 ESCGIEPD 288
>ref|XP_006438222.1| hypothetical protein CICLE_v10031251mg [Citrus clementina]
gi|557540418|gb|ESR51462.1| hypothetical protein
CICLE_v10031251mg [Citrus clementina]
Length = 517
Score = 245 bits (626), Expect = 7e-63
Identities = 122/215 (56%), Positives = 153/215 (71%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VTYN LNY C+ ML+EA KL+ +ME +PD YSYNQ LK LC +N++D AY
Sbjct: 252 PDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMF 311
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+VK ME +GL D VSYNT+I A+C +T++AY++FEEM +G E DVVTFTILI AF +
Sbjct: 312 MVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEEMRRRGIELDVVTFTILIKAFLR 371
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+G + +AE LL++M L PDR+LYTT+ID LCKS + A F DM ITPDVI
Sbjct: 372 EGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVIS 431
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YNALINGL K+ RV+E M YE+MQ G HPDEVT
Sbjct: 432 YNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVT 466
Score = 101 bits (251), Expect = 2e-19
Identities = 59/215 (27%), Positives = 99/215 (46%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD VTY I ++ C ++A + + M + KPD + + LC ++D AY
Sbjct: 147 PDFVTYTIVIDGLCKAKKFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYER 206
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
V M+ + + YN +I +C ++A + M G EPD+VT+ ++N +
Sbjct: 207 TVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKRNGCEPDLVTYNAILNYYCD 266
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+ D AE L+ M G+ PD Y ++ LC S ++D+A F + D +
Sbjct: 267 EVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVS 326
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YN +I K + + +E+M+R G D VT
Sbjct: 327 YNTVIEAFCKGGQTRRAYKLFEEMRRRGIELDVVT 361
Score = 96.7 bits (239), Expect = 6e-18
Identities = 66/246 (26%), Positives = 105/246 (42%), Gaps = 36/246 (14%)
Frame = +2
Query: 17 YNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLLVKTM 196
Y +++ G++++A + +M +S + + YN+F+ L + +R D + M
Sbjct: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLV-QFYYQQM 70
Query: 197 EKRGLCDT-VSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGRA 373
G T +Y+ I C + + + M G+ PD+ F I +N F + R
Sbjct: 71 HPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLGYLPDIWAFNIYLNLLFHENRI 130
Query: 374 DLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPD------- 532
DLA ++ +M KG PD V YT +ID LCK+ + D+A + M I PD
Sbjct: 131 DLALEVFHKMVSKGREPDFVTYTIVIDGLCKAKKFDKAVQAWEHMIENGIKPDNKACAAL 190
Query: 533 ----------------------------VICYNALINGLFKAFRVAEGMQFYEDMQRNGC 628
V+ YNALI+G + R+ M M+RNGC
Sbjct: 191 VVGLCGDGKVDLAYERTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKRNGC 250
Query: 629 HPDEVT 646
PD VT
Sbjct: 251 EPDLVT 256
Score = 88.2 bits (217), Expect = 2e-15
Identities = 46/150 (30%), Positives = 76/150 (50%)
Frame = +2
Query: 5 DMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLL 184
D+VT+ I + G A KLL +M PD Y + LCK+ + +AY +
Sbjct: 358 DVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVF 417
Query: 185 VKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKK 364
+ +E+ D +SYN +I C + +A ++EEM +G PD VTF +LI ++
Sbjct: 418 LDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQE 477
Query: 365 GRADLAEDLLDRMSQKGLFPDRVLYTTMID 454
+ +LA L D+M +KG D+ + +I+
Sbjct: 478 KKLELACRLWDQMMEKGFTLDKTVSAALIE 507
Score = 82.8 bits (203), Expect = 8e-14
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 1/189 (0%)
Frame = +2
Query: 74 LLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLLVKTMEKRGLCDTVSYNTMIRAYC 253
LL M++ PD +++N +L L NR+D A + K + K D V+Y +I C
Sbjct: 101 LLDNMDKLGYLPDIWAFNIYLNLLFHENRIDLALEVFHKMVSKGREPDFVTYTIVIDGLC 160
Query: 254 WARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGRADLA-EDLLDRMSQKGLFPDR 430
A++ KA + +E M G +PD L+ G+ DLA E + M K F
Sbjct: 161 KAKKFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYERTVGAMKGKVEF-GV 219
Query: 431 VLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVICYNALINGLFKAFRVAEGMQFYED 610
++Y +I C++GR+ +A M+R PD++ YNA++N + E + +
Sbjct: 220 LIYNALISGFCRTGRIRRAMAIKSFMKRNGCEPDLVTYNAILNYYCDEVMLDEAEKLVME 279
Query: 611 MQRNGCHPD 637
M+ G PD
Sbjct: 280 MESCGIEPD 288
>ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
gi|449494962|ref|XP_004159696.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
Length = 514
Score = 244 bits (624), Expect = 1e-62
Identities = 121/215 (56%), Positives = 154/215 (71%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD++TYNI LN+ C+ MLE A K +KKMER +PD YSYNQ LK LCKANR+D AY L
Sbjct: 252 PDLITYNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKL 311
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+ TM ++GLCDTVSYNT+I A C + T+KAYR+FEEM K PDV TF LI AF
Sbjct: 312 M-NTMWEKGLCDTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKAFLI 370
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+G +A+ LL M+Q L PD + YTT++D+ CK+ +++ AQ FRDM + I+PDV+
Sbjct: 371 EGSPHIAKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVS 430
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YNALINGL KA +V+E M YE+MQ GC+PDEVT
Sbjct: 431 YNALINGLCKASKVSEAMLLYEEMQIRGCYPDEVT 465
Score = 104 bits (260), Expect = 2e-20
Identities = 59/212 (27%), Positives = 103/212 (48%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VTY I ++ C ++A + + M PD + + LC ++D AY L
Sbjct: 147 PDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGKVDLAYEL 206
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
V M+ + + +N+++ +C + KA + MS G EPD++T+ IL+N F
Sbjct: 207 TVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNILLNFFCD 266
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+LA + +M + G+ PD Y ++ LCK+ R+D+A M + D +
Sbjct: 267 GLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKGLC-DTVS 325
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPD 637
YN +I L K+F + + +E+M + PD
Sbjct: 326 YNTVIGALCKSFATRKAYRLFEEMGQKDVAPD 357
Score = 103 bits (257), Expect = 5e-20
Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 35/247 (14%)
Frame = +2
Query: 11 VTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLLVK 190
+ + + C G+++EA ++ +M +S + YN+F+ L +R D A S +
Sbjct: 10 LVFRASITKCVKVGLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRFDLAESYYSR 69
Query: 191 TMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGR 370
+ + +Y+ I A C + R+ E+M G+ PD+ F I +N F++
Sbjct: 70 MIPQGFSLTPFTYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENL 129
Query: 371 ADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDV----- 535
+LA D M KG PD V YT ++D LCK+ + D+A F+R M ++PD+
Sbjct: 130 LELALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTA 189
Query: 536 ------------------------------ICYNALINGLFKAFRVAEGMQFYEDMQRNG 625
+ +N+L++G K+ R+++ + M ++G
Sbjct: 190 LVVGLCDGGKVDLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHG 249
Query: 626 CHPDEVT 646
C PD +T
Sbjct: 250 CEPDLIT 256
Score = 82.0 bits (201), Expect = 1e-13
Identities = 52/208 (25%), Positives = 96/208 (46%)
Frame = +2
Query: 14 TYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLLVKT 193
TY+ ++ C +LL+ M++ PD +++N +L L + N ++ A +
Sbjct: 81 TYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLLELALKFFDEM 140
Query: 194 MEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGRA 373
+ K D V+Y ++ C A++ KA + M KG PD+ T L+ G+
Sbjct: 141 VAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGKV 200
Query: 374 DLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVICYNAL 553
DLA +L + + + +++ +++ CKSGR+ +A M + PD+I YN L
Sbjct: 201 DLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNIL 260
Query: 554 INGLFKAFRVAEGMQFYEDMQRNGCHPD 637
+N + + + M+R G PD
Sbjct: 261 LNFFCDGLMLELAGKSMKKMERIGMEPD 288
Score = 72.8 bits (177), Expect = 9e-11
Identities = 45/150 (30%), Positives = 71/150 (47%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+ T+ + G A LL+ M ++ PD Y + CK +++ A +
Sbjct: 356 PDVGTFATLIKAFLIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGV 415
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+E D VSYN +I C A + +A ++EEM +G PD VTF ++I +
Sbjct: 416 FRDMIEIGISPDVVSYNALINGLCKASKVSEAMLLYEEMQIRGCYPDEVTFKLIIGGLLR 475
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMI 451
K LA + D+M +KG D+ L T+I
Sbjct: 476 KKELSLACQVWDQMMEKGYTLDKFLSETLI 505
>ref|XP_006836595.1| hypothetical protein AMTR_s00131p00098210 [Amborella trichopoda]
gi|548839134|gb|ERM99448.1| hypothetical protein
AMTR_s00131p00098210 [Amborella trichopoda]
Length = 704
Score = 244 bits (622), Expect = 2e-62
Identities = 117/215 (54%), Positives = 151/215 (70%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VTYN LNYCCN ++ EA KL++KM+R PD YSYN LK C AN++D AY L
Sbjct: 415 PDLVTYNTMLNYCCNENLVFEAEKLIEKMKRYGINPDKYSYNILLKGYCNANQLDKAYLL 474
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
LV ME + + D VSYNT++ A C R AY++ EEMS KG PDVVT++ LIN FF+
Sbjct: 475 LVDKMESKEIFDVVSYNTIVGALCRVRRAGTAYKLMEEMSMKGISPDVVTYSSLINGFFR 534
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+G DLAE+L +++ G PD V YTTM DHLCKSGRV+QA++ F +M + + PD+I
Sbjct: 535 EGHIDLAEELFNQILDVGFVPDVVTYTTMFDHLCKSGRVEQARSLFFNMIKNGVRPDMIS 594
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YNALI+GL KAF V+E ++ YE+M GC PDEVT
Sbjct: 595 YNALIDGLCKAFMVSEAVEVYEEMVHGGCEPDEVT 629
Score = 113 bits (283), Expect = 4e-23
Identities = 65/209 (31%), Positives = 109/209 (52%)
Frame = +2
Query: 14 TYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLLVKT 193
TY+ ++ + LE KLL + + PD ++YN+++ +LC+ N++D A +LL +
Sbjct: 245 TYSRFISGLSDANDLEYIEKLLSDIYKMGYAPDIWAYNKYMNSLCRLNKLDLALTLL-ED 303
Query: 194 MEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGRA 373
M +R + V+Y +I C Q A ++ EM KGFEPD++ L+ K +
Sbjct: 304 MTRRIKPNPVTYTIIINGLCRKERFQSALEVWNEMIRKGFEPDLIACGTLVFGLCKHSKV 363
Query: 374 DLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVICYNAL 553
DLA + R+ +G+ +Y +I+ C GR+D+AQ M R TPD++ YN +
Sbjct: 364 DLAYGVAMRVITRGIALTTPVYNALINGFCSIGRIDKAQAIVAFMRRNGCTPDLVTYNTM 423
Query: 554 INGLFKAFRVAEGMQFYEDMQRNGCHPDE 640
+N V E + E M+R G +PD+
Sbjct: 424 LNYCCNENLVFEAEKLIEKMKRYGINPDK 452
Score = 105 bits (261), Expect = 2e-20
Identities = 57/215 (26%), Positives = 101/215 (46%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
P+ VTY I +N C + A ++ +M R +PD + + LCK +++D AY +
Sbjct: 310 PNPVTYTIIINGLCRKERFQSALEVWNEMIRKGFEPDLIACGTLVFGLCKHSKVDLAYGV 369
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
++ + + T YN +I +C KA + M G PD+VT+ ++N
Sbjct: 370 AMRVITRGIALTTPVYNALINGFCSIGRIDKAQAIVAFMRRNGCTPDLVTYNTMLNYCCN 429
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+ AE L+++M + G+ PD+ Y ++ C + ++D+A D + DV+
Sbjct: 430 ENLVFEAEKLIEKMKRYGINPDKYSYNILLKGYCNANQLDKAYLLLVDKMESKEIFDVVS 489
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YN ++ L + R + E+M G PD VT
Sbjct: 490 YNTIVGALCRVRRAGTAYKLMEEMSMKGISPDVVT 524
Score = 92.8 bits (229), Expect = 8e-17
Identities = 61/206 (29%), Positives = 98/206 (47%)
Frame = +2
Query: 29 LNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLLVKTMEKRG 208
+ YC + A K ++M R T++Y++F+ L AN ++ LL +
Sbjct: 219 IKYC----QFDLAKKYYERMVRKGYPLTTFTYSRFISGLSDANDLEYIEKLLSDIYKMGY 274
Query: 209 LCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGRADLAED 388
D +YN + + C + A + E+M+ + +P+ VT+TI+IN +K R A +
Sbjct: 275 APDIWAYNKYMNSLCRLNKLDLALTLLEDMT-RRIKPNPVTYTIIINGLCRKERFQSALE 333
Query: 389 LLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVICYNALINGLF 568
+ + M +KG PD + T++ LCK +VD A + I YNALING
Sbjct: 334 VWNEMIRKGFEPDLIACGTLVFGLCKHSKVDLAYGVAMRVITRGIALTTPVYNALINGFC 393
Query: 569 KAFRVAEGMQFYEDMQRNGCHPDEVT 646
R+ + M+RNGC PD VT
Sbjct: 394 SIGRIDKAQAIVAFMRRNGCTPDLVT 419
Score = 82.8 bits (203), Expect = 8e-14
Identities = 47/151 (31%), Positives = 77/151 (50%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VTY+ +N G ++ A +L ++ PD +Y LCK+ R++ A SL
Sbjct: 520 PDVVTYSSLINGFFREGHIDLAEELFNQILDVGFVPDVVTYTTMFDHLCKSGRVEQARSL 579
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
++ D +SYN +I C A +A ++EEM G EPD VT+ +LI +
Sbjct: 580 FFNMIKNGVRPDMISYNALIDGLCKAFMVSEAVEVYEEMVHGGCEPDEVTYHLLIGGLLR 639
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMID 454
+ +A + D+M +KGL D V+ ++D
Sbjct: 640 DEKLGMACKIWDQMMEKGLVLDTVVGEALVD 670
>ref|XP_006417164.1| hypothetical protein EUTSA_v10007381mg [Eutrema salsugineum]
gi|557094935|gb|ESQ35517.1| hypothetical protein
EUTSA_v10007381mg [Eutrema salsugineum]
Length = 517
Score = 236 bits (602), Expect = 4e-60
Identities = 113/215 (52%), Positives = 152/215 (70%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VTYN+ LNY ++ ML++A ++ +M RS +PD YSYNQ LK C+ D YSL
Sbjct: 253 PDLVTYNVLLNYYYDHNMLKKAEGVMSEMVRSGIQPDAYSYNQLLKRHCRVGVPDKCYSL 312
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+VK ME RG CD VSY+T+I +C A T+KAY++FEEM KG +VVT+T LI AF +
Sbjct: 313 MVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYKLFEEMRQKGIVTNVVTYTSLIKAFLR 372
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+G + +A+ LLD+M++ GL PDR+ YTT++DHLCKSG VD+A F DM ITPD I
Sbjct: 373 EGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHGITPDAIS 432
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YNALI+GL ++ RV E M+ ++DMQ C PDE+T
Sbjct: 433 YNALISGLCRSCRVTEAMKLFKDMQSKECCPDELT 467
Score = 103 bits (258), Expect = 3e-20
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 1/216 (0%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+V+Y I +N G + +A + +M RS PD + + LC A ++D AY +
Sbjct: 147 PDVVSYTILINGLFRAGKVTDAVEFWNEMIRSGINPDNKACASLVVGLCDARKVDLAYEM 206
Query: 182 LVKTMEK-RGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFF 358
+ + ++ R TV YN +I +C A +KA + MS G PD+VT+ +L+N ++
Sbjct: 207 VAEEIKSARVKLSTVVYNALISGFCRAGRIEKAEALKSFMSKSGCSPDLVTYNVLLNYYY 266
Query: 359 KKGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVI 538
AE ++ M + G+ PD Y ++ C+ G D+ + R DV+
Sbjct: 267 DHNMLKKAEGVMSEMVRSGIQPDAYSYNQLLKRHCRVGVPDKCYSLMVKEMEPRGFCDVV 326
Query: 539 CYNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
Y+ LI +A + + +E+M++ G + VT
Sbjct: 327 SYSTLIETFCRASNTRKAYKLFEEMRQKGIVTNVVT 362
Score = 99.0 bits (245), Expect = 1e-18
Identities = 64/212 (30%), Positives = 104/212 (49%), Gaps = 2/212 (0%)
Frame = +2
Query: 17 YNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLLVKTM 196
YN + E A L + M ++Y++F+ LCK + D +LL + M
Sbjct: 47 YNRFIGVLVKESRFELAEALYRDMTPMGFSLIPFTYSRFISGLCKVRKFDLIDALL-RDM 105
Query: 197 EKRG-LCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGRA 373
E G + D ++N + C RE A + F M +G EPDVV++TILIN F+ G+
Sbjct: 106 ETLGYIPDIWAFNIYLDLLCREREVGFAVQTFFCMVRRGREPDVVSYTILINGLFRAGKV 165
Query: 374 DLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFF-RDMERLRITPDVICYNA 550
A + + M + G+ PD +++ LC + +VD A +++ R+ + YNA
Sbjct: 166 TDAVEFWNEMIRSGINPDNKACASLVVGLCDARKVDLAYEMVAEEIKSARVKLSTVVYNA 225
Query: 551 LINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
LI+G +A R+ + M ++GC PD VT
Sbjct: 226 LISGFCRAGRIEKAEALKSFMSKSGCSPDLVT 257
Score = 81.3 bits (199), Expect = 2e-13
Identities = 54/209 (25%), Positives = 91/209 (43%)
Frame = +2
Query: 11 VTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLLVK 190
+ Y + Y +GM++ A ++ ++ S + + YN+F+ L K +R + A +L
Sbjct: 10 LAYRSRIAYLVKSGMIDNAVQVFDELRHSSFRVFSSDYNRFIGVLVKESRFELAEAL--- 66
Query: 191 TMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGR 370
+ +M+ GF T++ I+ K +
Sbjct: 67 --------------------------------YRDMTPMGFSLIPFTYSRFISGLCKVRK 94
Query: 371 ADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVICYNA 550
DL + LL M G PD + +D LC+ V A F M R PDV+ Y
Sbjct: 95 FDLIDALLRDMETLGYIPDIWAFNIYLDLLCREREVGFAVQTFFCMVRRGREPDVVSYTI 154
Query: 551 LINGLFKAFRVAEGMQFYEDMQRNGCHPD 637
LINGLF+A +V + ++F+ +M R+G +PD
Sbjct: 155 LINGLFRAGKVTDAVEFWNEMIRSGINPD 183
Score = 77.0 bits (188), Expect = 5e-12
Identities = 45/153 (29%), Positives = 70/153 (45%)
Frame = +2
Query: 5 DMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLL 184
++VTY + G A KLL +M PD Y L LCK+ +D AY +
Sbjct: 359 NVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVF 418
Query: 185 VKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKK 364
+E D +SYN +I C + +A ++F++M K PD +TF +I ++
Sbjct: 419 NDMIEHGITPDAISYNALISGLCRSCRVTEAMKLFKDMQSKECCPDELTFKFIIGGLIRE 478
Query: 365 GRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLC 463
+ A + D+M KG DR + T+I C
Sbjct: 479 KKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 57.0 bits (136), Expect = 5e-06
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD + Y L++ C +G +++A + M PD SYN + LC++ R+ A L
Sbjct: 393 PDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHGITPDAISYNALISGLCRSCRVTEAMKL 452
Query: 182 LVKTMEKRGLC-DTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINA 352
K M+ + C D +++ +I ++ AY+++++M KGF D LI A
Sbjct: 453 F-KDMQSKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKA 509
>ref|XP_006304861.1| hypothetical protein CARUB_v10012598mg [Capsella rubella]
gi|482573572|gb|EOA37759.1| hypothetical protein
CARUB_v10012598mg [Capsella rubella]
Length = 517
Score = 233 bits (595), Expect = 3e-59
Identities = 111/215 (51%), Positives = 151/215 (70%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VTYN+ LNY N +L++A ++ +M RS + D YSYNQ LK C+ + D YS
Sbjct: 253 PDLVTYNVLLNYYYENNLLKKAEGVMTEMVRSGVELDAYSYNQLLKRHCRVSHPDKCYSF 312
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
+VK ME RG CD VSY+T+I YC A T+KAY++FEEM KG +VVT+T LI AF +
Sbjct: 313 MVKEMEPRGFCDVVSYSTLIETYCRASNTRKAYKLFEEMRQKGIVTNVVTYTSLIKAFLR 372
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+G++ +A+ LLD+M++ GL PDR+ YTT+++HLCKSG +D+A F DM RITPD I
Sbjct: 373 EGKSSVAKKLLDQMTELGLSPDRIFYTTILNHLCKSGNIDKAYGVFSDMIEHRITPDAIS 432
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YN+LI GL +A RV E ++ +EDMQ C PDE+T
Sbjct: 433 YNSLICGLCRACRVTEAIKLFEDMQSKECCPDELT 467
Score = 99.0 bits (245), Expect = 1e-18
Identities = 58/216 (26%), Positives = 107/216 (49%), Gaps = 1/216 (0%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+V+Y I +N G + +A ++ +M RS +PD + + LC A ++D AY +
Sbjct: 147 PDVVSYTILINGLFRAGKVTDAVEIWNEMIRSGVRPDNKACAALVVGLCHARKVDLAYEM 206
Query: 182 LVKTMEK-RGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFF 358
+ + ++ R TV YN +I +C A +KA + M+ EPD+VT+ +L+N ++
Sbjct: 207 VAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSFMNKIECEPDLVTYNVLLNYYY 266
Query: 359 KKGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVI 538
+ AE ++ M + G+ D Y ++ C+ D+ +F R DV+
Sbjct: 267 ENNLLKKAEGVMTEMVRSGVELDAYSYNQLLKRHCRVSHPDKCYSFMVKEMEPRGFCDVV 326
Query: 539 CYNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
Y+ LI +A + + +E+M++ G + VT
Sbjct: 327 SYSTLIETYCRASNTRKAYKLFEEMRQKGIVTNVVT 362
Score = 91.3 bits (225), Expect = 2e-16
Identities = 56/179 (31%), Positives = 92/179 (51%), Gaps = 2/179 (1%)
Frame = +2
Query: 116 YSYNQFLKALCKANRMDSAYSLLVKTMEKRGLC-DTVSYNTMIRAYCWARETQKAYRMFE 292
++Y++F+ LCK + D +LL + ME G D ++N + C + A + F
Sbjct: 80 FTYSRFISGLCKVKKFDLIDALL-RDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFF 138
Query: 293 EMSGKGFEPDVVTFTILINAFFKKGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSG 472
M +G EPDVV++TILIN F+ G+ A ++ + M + G+ PD ++ LC +
Sbjct: 139 CMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNEMIRSGVRPDNKACAALVVGLCHAR 198
Query: 473 RVDQAQNFF-RDMERLRITPDVICYNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
+VD A +++ R+ + YNALI+G KA R+ + M + C PD VT
Sbjct: 199 KVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSFMNKIECEPDLVT 257
Score = 84.3 bits (207), Expect = 3e-14
Identities = 48/153 (31%), Positives = 72/153 (47%)
Frame = +2
Query: 5 DMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLL 184
++VTY + G A KLL +M PD Y L LCK+ +D AY +
Sbjct: 359 NVVTYTSLIKAFLREGKSSVAKKLLDQMTELGLSPDRIFYTTILNHLCKSGNIDKAYGVF 418
Query: 185 VKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKK 364
+E R D +SYN++I C A +A ++FE+M K PD +TF +I ++
Sbjct: 419 SDMIEHRITPDAISYNSLICGLCRACRVTEAIKLFEDMQSKECCPDELTFKFIIGGLIRE 478
Query: 365 GRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLC 463
+ A + D+M KG DR + T+I C
Sbjct: 479 NKVSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 78.6 bits (192), Expect = 2e-12
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 3/211 (1%)
Frame = +2
Query: 14 TYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLLVKT 193
TY+ ++ C + LL+ ME PD +++N +L LC+ N++ A
Sbjct: 81 TYSRFISGLCKVKKFDLIDALLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCM 140
Query: 194 MEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKKGRA 373
+++ D VSY +I A + A ++ EM G PD L+ +
Sbjct: 141 VQRGREPDVVSYTILINGLFRAGKVTDAVEIWNEMIRSGVRPDNKACAALVVGLCHARKV 200
Query: 374 DLAEDLL-DRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVICYNA 550
DLA +++ + + + V+Y +I CK+GR+++A+ M ++ PD++ YN
Sbjct: 201 DLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSFMNKIECEPDLVTYNV 260
Query: 551 LINGLFK--AFRVAEGMQFYEDMQRNGCHPD 637
L+N ++ + AEG+ +M R+G D
Sbjct: 261 LLNYYYENNLLKKAEGVM--TEMVRSGVELD 289
Score = 73.9 bits (180), Expect = 4e-11
Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 1/174 (0%)
Frame = +2
Query: 119 SYNQFLKALCKANRMDSAYSLLVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEM 298
+Y + L K+ +D+A + + + YN I + A ++ +M
Sbjct: 11 AYRSRIAKLVKSGIIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYWDM 70
Query: 299 SGKGFEPDVVTFTILINAFFKKGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRV 478
GF T++ I+ K + DL + LL M G PD + +D LC+ +V
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLRDMETLGFIPDIWAFNIYLDLLCRENKV 130
Query: 479 DQA-QNFFRDMERLRITPDVICYNALINGLFKAFRVAEGMQFYEDMQRNGCHPD 637
A Q FF ++R R PDV+ Y LINGLF+A +V + ++ + +M R+G PD
Sbjct: 131 GFAVQTFFCMVQRGR-EPDVVSYTILINGLFRAGKVTDAVEIWNEMIRSGVRPD 183
Score = 60.1 bits (144), Expect = 6e-07
Identities = 33/117 (28%), Positives = 54/117 (46%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD + Y LN+ C +G +++A + M + PD SYN + LC+A R+ A L
Sbjct: 393 PDRIFYTTILNHLCKSGNIDKAYGVFSDMIEHRITPDAISYNSLICGLCRACRVTEAIKL 452
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINA 352
K D +++ +I + AY+++++M KGF D LI A
Sbjct: 453 FEDMQSKECCPDELTFKFIIGGLIRENKVSAAYKVWDQMMDKGFTLDRDVSDTLIKA 509
>ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297335822|gb|EFH66239.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 517
Score = 231 bits (588), Expect = 2e-58
Identities = 110/215 (51%), Positives = 150/215 (69%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+VTYN+ LNY +N ML+ A ++ +M RS + D YSYNQ LK C+ + D YS
Sbjct: 253 PDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRCYSF 312
Query: 182 LVKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFK 361
++K ME RG CD VSY+T+I +C A T+KAY++FEEM KG +VVTFT LI AF +
Sbjct: 313 MLKEMEPRGFCDVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLR 372
Query: 362 KGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVIC 541
+G + +A+ LLD+M++ GL PDR+ YTT++DHLCKSG VD+A F DM ITPD I
Sbjct: 373 EGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAIS 432
Query: 542 YNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
YN+LI+GL ++ RV E ++ +EDM+ C PDE+T
Sbjct: 433 YNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELT 467
Score = 100 bits (248), Expect = 5e-19
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 1/216 (0%)
Frame = +2
Query: 2 PDMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSL 181
PD+V+Y I +N G + +A ++ M RS PD + + LC A ++D AY +
Sbjct: 147 PDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEM 206
Query: 182 LVKTMEK-RGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFF 358
+ + ++ R V YN +I +C A +KA + MS G EPD+VT+ +L+N ++
Sbjct: 207 VAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYY 266
Query: 359 KKGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSGRVDQAQNFFRDMERLRITPDVI 538
AE ++ M + G+ D Y ++ C+ D+ +F R DV+
Sbjct: 267 DNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEPRGFCDVV 326
Query: 539 CYNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
Y+ LI +A + + +E+M++ G + VT
Sbjct: 327 SYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVT 362
Score = 94.0 bits (232), Expect = 4e-17
Identities = 56/179 (31%), Positives = 94/179 (52%), Gaps = 2/179 (1%)
Frame = +2
Query: 116 YSYNQFLKALCKANRMDSAYSLLVKTMEKRGLC-DTVSYNTMIRAYCWARETQKAYRMFE 292
++Y++F+ LCK + + +LL + ME G D ++N + C + A + F
Sbjct: 80 FTYSRFISGLCKVKKFELIDALL-RDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFF 138
Query: 293 EMSGKGFEPDVVTFTILINAFFKKGRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLCKSG 472
M +G EPDVV++TILIN F+ G+ A ++ + M + G+ PD ++ LC +
Sbjct: 139 CMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHAR 198
Query: 473 RVDQAQNFF-RDMERLRITPDVICYNALINGLFKAFRVAEGMQFYEDMQRNGCHPDEVT 646
+VD A +++ R+ ++ YNALI+G KA R+ + M + GC PD VT
Sbjct: 199 KVDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVT 257
Score = 81.3 bits (199), Expect = 2e-13
Identities = 46/153 (30%), Positives = 72/153 (47%)
Frame = +2
Query: 5 DMVTYNIELNYCCNNGMLEEAAKLLKKMERSQTKPDTYSYNQFLKALCKANRMDSAYSLL 184
++VT+ + G A KLL +M PD Y L LCK+ +D AY +
Sbjct: 359 NVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIF 418
Query: 185 VKTMEKRGLCDTVSYNTMIRAYCWARETQKAYRMFEEMSGKGFEPDVVTFTILINAFFKK 364
+E D +SYN++I C + +A ++FE+M GK PD +TF +I ++
Sbjct: 419 NDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRE 478
Query: 365 GRADLAEDLLDRMSQKGLFPDRVLYTTMIDHLC 463
+ A + D+M KG DR + T+I C
Sbjct: 479 KKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511