BLASTX nr result

ID: Papaver27_contig00055835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00055835
         (611 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007020973.1| F-box/RNI superfamily protein [Theobroma cac...    53   7e-09
ref|XP_007021078.1| F-box/RNI superfamily protein [Theobroma cac...    46   6e-07

>ref|XP_007020973.1| F-box/RNI superfamily protein [Theobroma cacao]
           gi|508720601|gb|EOY12498.1| F-box/RNI superfamily
           protein [Theobroma cacao]
          Length = 807

 Score = 53.1 bits (126), Expect(2) = 7e-09
 Identities = 42/130 (32%), Positives = 66/130 (50%)
 Frame = -1

Query: 605 IVFVDADLTTQLFSNCPVLEELMLNKCCMVEMKVSCVSVASLKRLFITSPARNSWNLKIN 426
           I F D      L S+CPVLEEL L+ C  ++     +S+ +L  L I+       ++ I 
Sbjct: 559 IEFQDEHSAQLLLSSCPVLEELYLDNCDWIKRTEIKISIPTLLTLSISLEYNGPPDISIR 618

Query: 425 LFLPNLQSLTYTGMPEDFVLTGHGFSSLVDADIDMPFESMNIYTKRGKERLRGLKNLAEG 246
           +  PNL +  YT   +  ++T    SS++ A++D+       Y +R +   R LK L EG
Sbjct: 619 ICTPNLLNFFYTSFSQVELVT-CDLSSVIRAEVDV--FGWLTYDQRVQVAHRTLK-LLEG 674

Query: 245 ILNVKLLKIS 216
           I  VK L++S
Sbjct: 675 IRGVKYLELS 684



 Score = 33.1 bits (74), Expect(2) = 7e-09
 Identities = 20/41 (48%), Positives = 23/41 (56%)
 Frame = -2

Query: 181 TFQNLRQLEVSSKLSCGTTEGLFYLLFKVPNLESIIFSQGF 59
           TF NL  L VS  LS      L ++L K PNL S+ F QGF
Sbjct: 704 TFYNLTHLNVSFVLSTRGGAALKHVLRKSPNLYSLHFFQGF 744


>ref|XP_007021078.1| F-box/RNI superfamily protein [Theobroma cacao]
           gi|508720706|gb|EOY12603.1| F-box/RNI superfamily
           protein [Theobroma cacao]
          Length = 418

 Score = 46.2 bits (108), Expect(2) = 6e-07
 Identities = 37/135 (27%), Positives = 62/135 (45%)
 Frame = -1

Query: 608 HIVFVDADLTTQLFSNCPVLEELMLNKCCMVEMKVSCVSVASLKRLFITSPARNSWNLKI 429
           +I F D      L S CPVL+EL ++ C   E     +S+ +L  L +     N  ++ I
Sbjct: 179 YIKFQDEHSAQFLLSACPVLKELYIDNCGWTETTKITISIPTLLTLSLIFFDENPPDMSI 238

Query: 428 NLFLPNLQSLTYTGMPEDFVLTGHGFSSLVDADIDMPFESMNIYTKRGKERLRGLKNLAE 249
            +  PNL +L YT   +   L     SS++ A++D+ F  ++   +   +       L +
Sbjct: 239 KICTPNLLNLYYTSSLQ-VELIACNLSSVIRAEVDV-FGWLSYDQRVRVQAAHRTLRLLK 296

Query: 248 GILNVKLLKISVSIL 204
            I  VK L++S   L
Sbjct: 297 AIRGVKFLELSYETL 311



 Score = 33.5 bits (75), Expect(2) = 6e-07
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = -2

Query: 181 TFQNLRQLEVSSKLSCGTTEGLFYLLFKVPNLESIIFSQGFTE 53
           TF NL  L V+   +      L ++L K PNL S+ F QGF E
Sbjct: 327 TFYNLTDLNVNFNFANRDGAALMHVLQKSPNLRSLHFPQGFDE 369


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