BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00055807
         (835 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...   182   1e-43
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      178   2e-42
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      174   5e-41
gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]       169   2e-39
ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis...   160   5e-37
ref|XP_006849794.1| hypothetical protein AMTR_s00176p00039530 [A...   160   7e-37
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   157   6e-36
ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Caps...   156   8e-36
gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thali...   156   8e-36
ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis tha...   156   8e-36
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   156   1e-35
ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   155   2e-35
ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   154   4e-35
emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis hall...   153   7e-35
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   153   7e-35
ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis ...   151   3e-34
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus...   151   3e-34
dbj|BAL63010.1| RNA-dependent RNA polymerase 1 [Cucumis sativus]      151   3e-34
ref|NP_001267682.1| RNA-dependent RNA polymerase 1-like [Cucumis...   151   3e-34
ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutr...   149   2e-33

>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
           gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
           polymerase 1 isoform 1 [Theobroma cacao]
           gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
           polymerase 1 isoform 1 [Theobroma cacao]
           gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
           gi|508709488|gb|EOY01385.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
           gi|508709489|gb|EOY01386.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score =  182 bits (463), Expect = 1e-43
 Identities = 95/186 (51%), Positives = 127/186 (68%), Gaps = 2/186 (1%)
 Frame = -3

Query: 560 EMVKEFLENYTGKGTVYALDIPKSKIKGPNPRVFANVQFISKQDARLISSLINQRLYYGK 381
           E VK FLE YTGK TVYAL I + K  G   R +A VQF    DA LI  L NQRLYYG 
Sbjct: 17  EEVKTFLELYTGKETVYALKIRQQKNGG---RAYAIVQFTKSTDAELIIRLTNQRLYYGS 73

Query: 380 SYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFRKLS 201
           SYLK R++  D+VPKPR  +  ++   LHFGCQVS++ F+V+W+ ++VTV+F  G RKL 
Sbjct: 74  SYLKAREMENDIVPKPRTFLHTMEGVTLHFGCQVSNEKFYVLWEEVDVTVNFGMGMRKLQ 133

Query: 200 FLSSYCDVNYKLELSYESIWEIQLRRPKNLSSQFLIIQMNAAPRVYAEPLSSLGNAGRD- 24
           FL S+  V Y+L+L YE+IW+I+L RP+N +S++L+IQ+  APR+Y + + S G    + 
Sbjct: 134 FLLSHHCVEYRLDLFYENIWQIELHRPRNQTSKYLLIQLFGAPRIYEKDVRSSGLVFENP 193

Query: 23  -LQYFM 9
            L YFM
Sbjct: 194 LLNYFM 199


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  178 bits (452), Expect = 2e-42
 Identities = 90/164 (54%), Positives = 116/164 (70%)
 Frame = -3

Query: 554 VKEFLENYTGKGTVYALDIPKSKIKGPNPRVFANVQFISKQDARLISSLINQRLYYGKSY 375
           VK FLE YTG+ TVYAL I + K  G   R FA VQF    DA LI  L NQRLYYG+SY
Sbjct: 19  VKTFLEGYTGRETVYALKIRQHKKSG---RAFAIVQFTRSSDAGLIIRLANQRLYYGRSY 75

Query: 374 LKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFRKLSFL 195
           LK R++  D+VPKPRV +  ++   ++FGCQVS++ F+V+WK  NVT++F  G RKL FL
Sbjct: 76  LKAREMETDIVPKPRVFLHTMERVTVNFGCQVSEEKFYVLWKADNVTLNFGTGMRKLEFL 135

Query: 194 SSYCDVNYKLELSYESIWEIQLRRPKNLSSQFLIIQMNAAPRVY 63
            SYC   YKLEL YE+IW+I+LR P + +S+ L+IQ+  APR+Y
Sbjct: 136 LSYCSSKYKLELFYENIWQIELRCPHSQTSKHLLIQLFGAPRIY 179


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  174 bits (440), Expect = 5e-41
 Identities = 88/164 (53%), Positives = 114/164 (69%)
 Frame = -3

Query: 554 VKEFLENYTGKGTVYALDIPKSKIKGPNPRVFANVQFISKQDARLISSLINQRLYYGKSY 375
           VK FLE YTG+ TVYAL I + K  G   R FA VQF    DA LI  L NQRLYYG+SY
Sbjct: 19  VKTFLEGYTGRETVYALKIRQHKKSG---RAFAIVQFTRSSDAGLIIRLANQRLYYGRSY 75

Query: 374 LKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFRKLSFL 195
           LK R++  D+VPKPRV +  ++   ++F C VS++ F+V+WK  NVT++F  G RKL FL
Sbjct: 76  LKAREMETDIVPKPRVFLHTMERVTVNFDCHVSEEKFYVLWKADNVTLNFGTGMRKLEFL 135

Query: 194 SSYCDVNYKLELSYESIWEIQLRRPKNLSSQFLIIQMNAAPRVY 63
            SYC   YKLEL YE+IW+I+LR P + +S+ L+IQ+  APR+Y
Sbjct: 136 LSYCSSKYKLELFYENIWQIELRCPHSQTSKHLLIQLFGAPRIY 179


>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 1133

 Score =  169 bits (427), Expect = 2e-39
 Identities = 82/166 (49%), Positives = 118/166 (71%)
 Frame = -3

Query: 560 EMVKEFLENYTGKGTVYALDIPKSKIKGPNPRVFANVQFISKQDARLISSLINQRLYYGK 381
           E VKEFLE +TG+GTVYA+ I  +K  G   R +A VQF++ + A LI  L N RL+YG+
Sbjct: 17  ESVKEFLEGHTGRGTVYAIKIRPTKNGGS--RSYAIVQFMTVETAELIIRLANPRLWYGR 74

Query: 380 SYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFRKLS 201
           SYL  R + RD+VPKPR +++ LQ   LHFGCQ+S + F  +W+  NV+VDF  G R+L+
Sbjct: 75  SYLLARVMERDIVPKPRATLYSLQNVTLHFGCQISKEKFSFLWRVGNVSVDFGLGLRRLN 134

Query: 200 FLSSYCDVNYKLELSYESIWEIQLRRPKNLSSQFLIIQMNAAPRVY 63
           F  +Y  V Y+L+L YE++W+I+L RP+  ++++L+IQ+  APRVY
Sbjct: 135 FYLTYGPVEYRLQLLYENVWQIELHRPRGQTAKYLLIQLLGAPRVY 180


>ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
           gi|316989899|gb|ADU77015.1| RNA-dependent RNA polymerase
           1a [Cucumis sativus]
          Length = 1130

 Score =  160 bits (405), Expect = 5e-37
 Identities = 85/177 (48%), Positives = 113/177 (63%)
 Frame = -3

Query: 569 IVMEMVKEFLENYTGKGTVYALDIPKSKIKGPNPRVFANVQFISKQDARLISSLINQRLY 390
           +  + VK FLE +TG GTVYA+ +   K  G   R++A VQF S   A LI SL NQRL+
Sbjct: 14  VTADAVKNFLEGHTGPGTVYAIKVRPPKRGGG--RLYAIVQFTSATQAELIISLANQRLW 71

Query: 389 YGKSYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFR 210
           YG SYLK R    D+VPKPR  M+ L+   L FGCQVS + F V+W+G    V F  G R
Sbjct: 72  YGSSYLKARATEVDIVPKPRTYMYTLEELLLCFGCQVSTEKFRVLWEGNVDLVTFGIGMR 131

Query: 209 KLSFLSSYCDVNYKLELSYESIWEIQLRRPKNLSSQFLIIQMNAAPRVYAEPLSSLG 39
           K++F   Y  V Y+LELSYE IW+IQL  P++ S ++L+IQ++ APR+Y +   + G
Sbjct: 132 KMNFHLKYKSVEYRLELSYEIIWQIQLHCPRDQSMKYLLIQLSGAPRIYKKVAPNSG 188


>ref|XP_006849794.1| hypothetical protein AMTR_s00176p00039530 [Amborella trichopoda]
           gi|548853371|gb|ERN11375.1| hypothetical protein
           AMTR_s00176p00039530 [Amborella trichopoda]
          Length = 1210

 Score =  160 bits (404), Expect = 7e-37
 Identities = 83/173 (47%), Positives = 118/173 (68%), Gaps = 2/173 (1%)
 Frame = -3

Query: 560 EMVKEFLENYTGKGTVYALDIPKSKIKGPNPRVFANVQFISKQDARLISSLINQ--RLYY 387
           E VK+FLE+ TG GTVY L I   K K PN RVFA VQF + + A +I SL  Q   LY+
Sbjct: 90  EAVKKFLESITGFGTVYHLKIRIHKSK-PNSRVFAIVQFTTSKSAEVIYSLAPQPKSLYF 148

Query: 386 GKSYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFRK 207
           G SY+ VR +  D+VP PRV+   L++  L+FG Q+S++ F ++W   NV V+F FG +K
Sbjct: 149 GNSYVIVRYMENDIVPNPRVTYHVLESIQLYFGNQISEESFAILWSNTNVKVEFGFGLKK 208

Query: 206 LSFLSSYCDVNYKLELSYESIWEIQLRRPKNLSSQFLIIQMNAAPRVYAEPLS 48
           + F  ++  V+YKL+L YE+IW+IQLRRP    +++L++QM  APR++ +PLS
Sbjct: 209 IFFYLAHTGVDYKLDLYYENIWQIQLRRPGTEGTRYLVLQMQGAPRIFQKPLS 261


>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score =  157 bits (396), Expect = 6e-36
 Identities = 81/177 (45%), Positives = 122/177 (68%), Gaps = 2/177 (1%)
 Frame = -3

Query: 569 IVMEMVKEFLENYTGKGTVYALDIPKSKIKGPNPRVFANVQFISKQDARLISSLI--NQR 396
           +  E VK+FLE+ TG GTVYAL +   K KG   R++A VQF +K+ A  I SL    ++
Sbjct: 14  VTAEAVKDFLESKTGGGTVYALKLRTPK-KGVG-RLYAIVQFTTKEAADTIISLACRTEK 71

Query: 395 LYYGKSYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFG 216
           L+YG+SYL  R + +D VP+PR  M  ++   LHFGC++S++ F V+W+G+NVTV+F FG
Sbjct: 72  LWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNEKFAVLWRGVNVTVNFGFG 131

Query: 215 FRKLSFLSSYCDVNYKLELSYESIWEIQLRRPKNLSSQFLIIQMNAAPRVYAEPLSS 45
            RK++FL S+    Y+LEL YE+IWEI+L  P+   +++L+IQ+  APR++ + + S
Sbjct: 132 MRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIFQKGIRS 188


>ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Capsella rubella]
           gi|482575337|gb|EOA39524.1| hypothetical protein
           CARUB_v10008144mg [Capsella rubella]
          Length = 1107

 Score =  156 bits (395), Expect = 8e-36
 Identities = 80/164 (48%), Positives = 110/164 (67%)
 Frame = -3

Query: 554 VKEFLENYTGKGTVYALDIPKSKIKGPNPRVFANVQFISKQDARLISSLINQRLYYGKSY 375
           VK FLE  TG GTVYA+ + + K  GP  RVFA VQF S++ ARLI ++  +RLYYG+SY
Sbjct: 19  VKIFLERLTGSGTVYAIKVRQPKRGGP--RVFAIVQFTSERHARLIITMAAERLYYGRSY 76

Query: 374 LKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFRKLSFL 195
           LK  ++ +D+VPKPR S+  +    ++FGCQVS      +W   NV V F  G RKL F 
Sbjct: 77  LKAFEMEQDIVPKPRASLHSISNLKMYFGCQVSPKKLLTLWSAHNVCVSFGTGMRKLHFS 136

Query: 194 SSYCDVNYKLELSYESIWEIQLRRPKNLSSQFLIIQMNAAPRVY 63
            S+   +Y+LELSYE+IW+I L  P+  SS+FL+IQ+  AP+++
Sbjct: 137 MSWYQKDYRLELSYENIWQIDLHSPQGGSSKFLVIQVIGAPKIF 180


>gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score =  156 bits (395), Expect = 8e-36
 Identities = 80/173 (46%), Positives = 113/173 (65%)
 Frame = -3

Query: 581 FNHLIVMEMVKEFLENYTGKGTVYALDIPKSKIKGPNPRVFANVQFISKQDARLISSLIN 402
           F + +  E VK+FLE  TG GTVYA+ + + K  GP  RV+A VQF S++  RLI +   
Sbjct: 10  FPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGP--RVYAIVQFTSERHTRLIITAAA 67

Query: 401 QRLYYGKSYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFE 222
           +RLYYG+SYLK  ++ +D+VPKPR S+  +    + FGCQVS   F  +W   +V V F 
Sbjct: 68  ERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSAQDVCVSFG 127

Query: 221 FGFRKLSFLSSYCDVNYKLELSYESIWEIQLRRPKNLSSQFLIIQMNAAPRVY 63
            G RKL F  S+   +Y+LELSYE+IW+I L  P+  SS+FL+IQ+  AP+++
Sbjct: 128 IGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIF 180


>ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
           gi|75335341|sp|Q9LQV2.1|RDR1_ARATH RecName:
           Full=RNA-dependent RNA polymerase 1; Short=AtRDRP1;
           AltName: Full=RNA-directed RNA polymerase 1
           gi|8778232|gb|AAF79241.1|AC006917_26 F10B6.19
           [Arabidopsis thaliana] gi|110737376|dbj|BAF00633.1|
           putative RNA-directed RNA polymerase [Arabidopsis
           thaliana] gi|332191105|gb|AEE29226.1| RNA-dependent RNA
           polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score =  156 bits (395), Expect = 8e-36
 Identities = 80/173 (46%), Positives = 113/173 (65%)
 Frame = -3

Query: 581 FNHLIVMEMVKEFLENYTGKGTVYALDIPKSKIKGPNPRVFANVQFISKQDARLISSLIN 402
           F + +  E VK+FLE  TG GTVYA+ + + K  GP  RV+A VQF S++  RLI +   
Sbjct: 10  FPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGP--RVYAIVQFTSERHTRLIITAAA 67

Query: 401 QRLYYGKSYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFE 222
           +RLYYG+SYLK  ++ +D+VPKPR S+  +    + FGCQVS   F  +W   +V V F 
Sbjct: 68  ERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSAQDVCVSFG 127

Query: 221 FGFRKLSFLSSYCDVNYKLELSYESIWEIQLRRPKNLSSQFLIIQMNAAPRVY 63
            G RKL F  S+   +Y+LELSYE+IW+I L  P+  SS+FL+IQ+  AP+++
Sbjct: 128 IGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIF 180


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  156 bits (394), Expect = 1e-35
 Identities = 76/180 (42%), Positives = 117/180 (65%)
 Frame = -3

Query: 581 FNHLIVMEMVKEFLENYTGKGTVYALDIPKSKIKGPNPRVFANVQFISKQDARLISSLIN 402
           F  ++  + +KEFLE YTG+GT+ AL+I + +         A VQF S + A  I +L  
Sbjct: 10  FPSIVSADEIKEFLEKYTGEGTIEALEIKQPRSGAS--MTHAKVQFTSFELAEFIITLCK 67

Query: 401 QRLYYGKSYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFE 222
           ++++YG++YLK R++  D++PKPR  +  +    LHFGCQ+SD+ F V+WK +NV+V F 
Sbjct: 68  KKVWYGRNYLKAREMDLDIIPKPRAFLHSMDRITLHFGCQMSDERFCVLWKAINVSVKFG 127

Query: 221 FGFRKLSFLSSYCDVNYKLELSYESIWEIQLRRPKNLSSQFLIIQMNAAPRVYAEPLSSL 42
            G RK  F  S+    YKLELSYE+IW+IQL+ P+   ++FL+IQ+  AP++Y + +  L
Sbjct: 128 SGLRKFYFFLSHGSEEYKLELSYENIWQIQLQHPRGQITKFLLIQLLGAPQIYEKDVPVL 187


>ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Fragaria vesca
           subsp. vesca]
          Length = 1119

 Score =  155 bits (391), Expect = 2e-35
 Identities = 85/184 (46%), Positives = 115/184 (62%), Gaps = 1/184 (0%)
 Frame = -3

Query: 560 EMVKEFLENYTGKGTVYALDIPKSKIKGPNPRVFANVQFISKQDARLISSLINQRLYYGK 381
           E +KEFLE +TG+G+V+AL +  +K  G   R +A +QF S   A  I SL N RL+YG+
Sbjct: 17  ENIKEFLEKHTGEGSVFALKLRPAKSGG---RFYAIIQFQSISQAEKIISLANARLWYGR 73

Query: 380 SYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFRKLS 201
           SYL  R  A D+VPKPR  +  L+   LH GCQV+ D F V+W    V+VDF FG R L 
Sbjct: 74  SYLNARP-AHDIVPKPRTFLHSLRDLVLHVGCQVAKDKFSVLWGTAEVSVDFGFGMRNLQ 132

Query: 200 FLSSYCDVNYKLELSYESIWEIQLRRPKNLSSQFLIIQMNAAPRVY-AEPLSSLGNAGRD 24
           F   Y    Y+L+LSYE+IW+I+L   +  S+++L+IQ+   PR+Y  E  SS GN   D
Sbjct: 133 FRLLYRQKVYRLQLSYENIWQIELHHQRGRSAKYLVIQLYGNPRIYQQEVCSSGGNGYED 192

Query: 23  LQYF 12
           + YF
Sbjct: 193 MNYF 196


>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Glycine
           max] gi|571439308|ref|XP_006574822.1| PREDICTED:
           RNA-dependent RNA polymerase 1-like isoform X2 [Glycine
           max] gi|571439310|ref|XP_006574823.1| PREDICTED:
           RNA-dependent RNA polymerase 1-like isoform X3 [Glycine
           max]
          Length = 1125

 Score =  154 bits (389), Expect = 4e-35
 Identities = 81/176 (46%), Positives = 115/176 (65%), Gaps = 3/176 (1%)
 Frame = -3

Query: 554 VKEFLENYTGKGTVYALDIPKSKIKGPNPRVFANVQFISKQDARLISSLIN---QRLYYG 384
           VK F+E YTG+GTV+A+ +   K  G  PR FA +QF +   A  + S  N   + L YG
Sbjct: 19  VKTFVEQYTGEGTVFAIKLRHGK--GRVPRAFAIIQFTTANSATSMMSRANNILRTLRYG 76

Query: 383 KSYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFRKL 204
            SYLK R++ RD+VP+PRV +  L    L FGCQ+S   F V+WK  +V V+F  G RK+
Sbjct: 77  TSYLKAREMERDIVPRPRVFLHSLDDVKLSFGCQISKGRFSVLWKKQDVIVNFGSGMRKM 136

Query: 203 SFLSSYCDVNYKLELSYESIWEIQLRRPKNLSSQFLIIQMNAAPRVYAEPLSSLGN 36
            FL S+ +V YKLELSYE+IW+I+L RP+N ++++L+IQ+  APRV+   + +  N
Sbjct: 137 HFLFSHNNVQYKLELSYENIWKIELHRPRNETTRYLLIQLLGAPRVFENDVPTSTN 192


>emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis halleri subsp. halleri]
          Length = 1107

 Score =  153 bits (387), Expect = 7e-35
 Identities = 79/174 (45%), Positives = 115/174 (66%), Gaps = 1/174 (0%)
 Frame = -3

Query: 581 FNHLIVMEMVKEFLENYTGKGTVYALDIPKSKIKGPNPRVFANVQFISKQDAR-LISSLI 405
           F + +  E VK+FLE  TG GTVYA+ + + K  GP  RVFA VQF +++ AR +I+   
Sbjct: 10  FPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGP--RVFAIVQFTNERYARQIITGAA 67

Query: 404 NQRLYYGKSYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDF 225
            +RLYYG+SYL   ++ +D+VPKPR S+ ++    ++FGCQVS   F  +W   +V V F
Sbjct: 68  ERRLYYGRSYLNAFEVDQDIVPKPRASLHNISGLKMYFGCQVSTQKFLTLWSAQDVCVSF 127

Query: 224 EFGFRKLSFLSSYCDVNYKLELSYESIWEIQLRRPKNLSSQFLIIQMNAAPRVY 63
             G RKL F  S+   +Y+LELSYE+IW+I L  P+  SS+FL+IQ+  AP+++
Sbjct: 128 GIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIF 181


>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score =  153 bits (387), Expect = 7e-35
 Identities = 82/173 (47%), Positives = 116/173 (67%), Gaps = 2/173 (1%)
 Frame = -3

Query: 554 VKEFLENYTGKGTVYALDI--PKSKIKGPNPRVFANVQFISKQDARLISSLINQRLYYGK 381
           +KEFLE YTG+GT+ AL+I  PKS +        A VQF S + A LI SL  Q L+YG 
Sbjct: 19  IKEFLEKYTGEGTIEALEIKQPKSGVS----MTHAKVQFTSLRLAELIISLAKQ-LWYGG 73

Query: 380 SYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFRKLS 201
           +YLK R++  D++PKPR  +  +    LHFG Q+S++ F V+WK +NV+V F FG RK  
Sbjct: 74  NYLKAREMDLDIIPKPRTFLHSMDRITLHFGYQMSNERFCVLWKAINVSVKFGFGLRKFY 133

Query: 200 FLSSYCDVNYKLELSYESIWEIQLRRPKNLSSQFLIIQMNAAPRVYAEPLSSL 42
           F  S+    YKLELS E+IW+IQLR P+  +++FL+IQ+  AP++Y + +S+L
Sbjct: 134 FFLSHGSEEYKLELSCENIWQIQLREPRGQNTKFLLIQLLDAPQIYEKDVSAL 186


>ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297338672|gb|EFH69089.1| RNA-dependent RNA polymerase
           1 [Arabidopsis lyrata subsp. lyrata]
          Length = 1107

 Score =  151 bits (382), Expect = 3e-34
 Identities = 78/174 (44%), Positives = 114/174 (65%), Gaps = 1/174 (0%)
 Frame = -3

Query: 581 FNHLIVMEMVKEFLENYTGKGTVYALDIPKSKIKGPNPRVFANVQFISKQDAR-LISSLI 405
           F + +  E VK+FLE  TG GTVYA+ + + K  GP  RVFA VQF ++  AR +I+   
Sbjct: 10  FPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGP--RVFAIVQFTNEIYARQIITGAA 67

Query: 404 NQRLYYGKSYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDF 225
            +RLYYG+SYL   ++ +D+VPKPR S+ ++    ++FGCQVS      +W   +V+V F
Sbjct: 68  ERRLYYGRSYLNAFEVEQDIVPKPRASLHNISGLKMYFGCQVSTQTLLTLWSAQDVSVSF 127

Query: 224 EFGFRKLSFLSSYCDVNYKLELSYESIWEIQLRRPKNLSSQFLIIQMNAAPRVY 63
             G RKL F  S+   +Y+LELSYE+IW+I L  P+  SS+FL+IQ+  AP+++
Sbjct: 128 GIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIF 181


>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
          Length = 1110

 Score =  151 bits (381), Expect = 3e-34
 Identities = 82/193 (42%), Positives = 115/193 (59%)
 Frame = -3

Query: 581 FNHLIVMEMVKEFLENYTGKGTVYALDIPKSKIKGPNPRVFANVQFISKQDARLISSLIN 402
           F +L+  E+VK+FLENYTG+GTV AL++  +K+     R +A VQF + + A  I  L  
Sbjct: 10  FPYLVAAELVKKFLENYTGEGTVIALEVKTAKV---GRRAYARVQFTNIRCAETIIDLAK 66

Query: 401 QRLYYGKSYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFE 222
            RLYYG SYLK  +   D+V  PR     ++   L+FGCQ+S   F V+WKG +VTV F 
Sbjct: 67  NRLYYGTSYLKAYESDIDIVQNPRTFAHEMENVTLNFGCQISPHKFSVLWKGESVTVKFG 126

Query: 221 FGFRKLSFLSSYCDVNYKLELSYESIWEIQLRRPKNLSSQFLIIQMNAAPRVYAEPLSSL 42
            G +K+ F   +  V YK++LSYE+IW+I L      SS+ L+IQ+  APR+Y +     
Sbjct: 127 TGMKKMHFFLRHNSVEYKMQLSYENIWQIVLYNSYGQSSKLLVIQLFGAPRIYKK----- 181

Query: 41  GNAGRDLQYFMHT 3
             +G    YFM T
Sbjct: 182 -LSGSVYSYFMVT 193


>dbj|BAL63010.1| RNA-dependent RNA polymerase 1 [Cucumis sativus]
          Length = 1115

 Score =  151 bits (381), Expect = 3e-34
 Identities = 76/177 (42%), Positives = 110/177 (62%)
 Frame = -3

Query: 569 IVMEMVKEFLENYTGKGTVYALDIPKSKIKGPNPRVFANVQFISKQDARLISSLINQRLY 390
           ++ E VK F+E  TG GT+ A++  +SK  G   RV+A +QF  ++ A+ I S   +RL 
Sbjct: 14  VLQESVKTFVEGITGTGTIDAINTKRSK--GGGRRVYAIIQFTDEEGAKSIISKATERLC 71

Query: 389 YGKSYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFR 210
           YG SYLK R++  D++P P V  ++ +A  LH GCQ+S + F V+W   NV+VDF F  R
Sbjct: 72  YGTSYLKAREMKHDILPDPLVFDYNFKALRLHLGCQISKESFSVLWTESNVSVDFGFDVR 131

Query: 209 KLSFLSSYCDVNYKLELSYESIWEIQLRRPKNLSSQFLIIQMNAAPRVYAEPLSSLG 39
           KL F  SY  V+Y L L YE+IW+++L +P   S  +L+IQ+  APR+Y     S G
Sbjct: 132 KLYFFISYPRVDYMLVLRYENIWQVELHKPHGQSVDYLLIQLFGAPRIYERDARSFG 188


>ref|NP_001267682.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
           gi|316989901|gb|ADU77016.1| RNA-dependent RNA polymerase
           1b [Cucumis sativus]
          Length = 1115

 Score =  151 bits (381), Expect = 3e-34
 Identities = 76/177 (42%), Positives = 110/177 (62%)
 Frame = -3

Query: 569 IVMEMVKEFLENYTGKGTVYALDIPKSKIKGPNPRVFANVQFISKQDARLISSLINQRLY 390
           ++ E VK F+E  TG GT+ A++  +SK  G   RV+A +QF  ++ A+ I S   +RL 
Sbjct: 14  VLQESVKTFVEGITGTGTIDAINTKRSK--GGGRRVYAIIQFTDEEGAKSIISKATERLC 71

Query: 389 YGKSYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFR 210
           YG SYLK R++  D++P P V  ++ +A  LH GCQ+S + F V+W   NV+VDF F  R
Sbjct: 72  YGTSYLKAREMKHDILPDPLVFDYNFKALRLHLGCQISKESFSVLWTESNVSVDFGFELR 131

Query: 209 KLSFLSSYCDVNYKLELSYESIWEIQLRRPKNLSSQFLIIQMNAAPRVYAEPLSSLG 39
           KL F  SY  V+Y L L YE+IW+++L +P   S  +L+IQ+  APR+Y     S G
Sbjct: 132 KLYFFISYPRVDYMLVLRYENIWQVELHKPHGQSVDYLLIQLFGAPRIYERDARSFG 188


>ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutrema salsugineum]
           gi|557094740|gb|ESQ35322.1| hypothetical protein
           EUTSA_v10006629mg [Eutrema salsugineum]
          Length = 1108

 Score =  149 bits (375), Expect = 2e-33
 Identities = 75/166 (45%), Positives = 108/166 (65%)
 Frame = -3

Query: 560 EMVKEFLENYTGKGTVYALDIPKSKIKGPNPRVFANVQFISKQDARLISSLINQRLYYGK 381
           E VK FLE  TG GTVYA+ + + K  GP  RV+A VQF +++ AR I +   + LYYG+
Sbjct: 17  EEVKNFLERETGSGTVYAIKVRQPKKGGP--RVYAIVQFTNERHARWIITRAEEGLYYGR 74

Query: 380 SYLKVRDLARDVVPKPRVSMFHLQAPALHFGCQVSDDCFHVIWKGLNVTVDFEFGFRKLS 201
           SYLK  ++ +D+VPKPR S+  +    ++FGCQV+     V+W   NV V F  G RKL 
Sbjct: 75  SYLKASEVEQDIVPKPRASLHKISDLKIYFGCQVTPKKLSVLWSAQNVCVSFGTGMRKLH 134

Query: 200 FLSSYCDVNYKLELSYESIWEIQLRRPKNLSSQFLIIQMNAAPRVY 63
           F  S+ + +Y+LEL YE+IW I L  P+  +S+FL+IQ+  AP+++
Sbjct: 135 FSISWYEKDYRLELPYENIWRIDLYSPQGRASKFLVIQVIGAPKIF 180