BLASTX nr result

ID: Papaver27_contig00055693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00055693
         (503 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulga...    54   1e-06
emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulga...    52   2e-06
ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein A...    47   3e-06
emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulga...    48   4e-06

>emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1380

 Score = 54.3 bits (129), Expect(2) = 1e-06
 Identities = 17/44 (38%), Positives = 31/44 (70%)
 Frame = +1

Query: 160  DLCVFCNSERETKNHMFLHCPYSFEIWNYFIKAFQI*WPMPRSL 291
            ++CV CN+  E  NH+ LHCP+S  +WN+++  +++ W +P +L
Sbjct: 1088 NICVLCNTSPEQHNHLLLHCPFSLSLWNWWLDLWRLKWVLPETL 1131



 Score = 23.9 bits (50), Expect(2) = 1e-06
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +3

Query: 297  LFEAWNINFWRGRGKLVWEIIHYTICWRLWK 389
            LF+ W         K VW    + I W +WK
Sbjct: 1134 LFDQWLSPIKTPFFKKVWAATFFIISWSIWK 1164


>emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 52.0 bits (123), Expect(2) = 2e-06
 Identities = 19/55 (34%), Positives = 35/55 (63%)
 Frame = +1

Query: 127  MLRHRGVEIERDLCVFCNSERETKNHMFLHCPYSFEIWNYFIKAFQI*WPMPRSL 291
            +L  + +  E   C+FC+S  E+ NH+FL C YS E+W+++ + + + W +P S+
Sbjct: 1077 LLNLKLISNEDSSCIFCSSSIESTNHLFLECSYSKELWHWWFQIWNVAWVLPSSI 1131



 Score = 25.0 bits (53), Expect(2) = 2e-06
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = +3

Query: 294  ELFEAWNINFWRGRGKLVWEIIHYTICWRLWK 389
            ELF  W   F     K VW    + I W +WK
Sbjct: 1133 ELFTHWIPPFKGKFFKKVWMSCFFIILWTIWK 1164


>ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 217

 Score = 47.4 bits (111), Expect(2) = 3e-06
 Identities = 18/45 (40%), Positives = 27/45 (60%)
 Frame = +1

Query: 157 RDLCVFCNSERETKNHMFLHCPYSFEIWNYFIKAFQI*WPMPRSL 291
           R  C  C  + ET NH+FLHC ++ ++W  FI+  +I W  P S+
Sbjct: 93  RSSCYLCEEQVETVNHLFLHCKWTDQLWQMFIQKRKIKWTKPGSI 137



 Score = 29.3 bits (64), Expect(2) = 3e-06
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +3

Query: 291 LELFEAWNINFWRGRGKLVWEIIHYTICWRLWK 389
           +E+ + WN +   G+ +  W I+   I W +WK
Sbjct: 138 IEVLQCWNRDGNAGKNEKRWRIVPACIWWTIWK 170


>emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 48.1 bits (113), Expect(2) = 4e-06
 Identities = 18/44 (40%), Positives = 29/44 (65%)
 Frame = +1

Query: 160  DLCVFCNSERETKNHMFLHCPYSFEIWNYFIKAFQI*WPMPRSL 291
            ++C  C +E ET  H+ LHCP + +IW+++I  ++I W  P SL
Sbjct: 1088 NICPLCMTEPETAEHLLLHCPVASQIWSWWIGLWRIKWAFPLSL 1131



 Score = 28.1 bits (61), Expect(2) = 4e-06
 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
 Frame = +3

Query: 291  LELFEAWNINFWRGRG---KLVWEIIHYTICWRLWK 389
            L L EA+   FW       K VW  + + I W LWK
Sbjct: 1129 LSLREAFTQWFWPKNSPFFKKVWSAVFFIIVWTLWK 1164


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