BLASTX nr result

ID: Papaver27_contig00055622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00055622
         (549 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP94600.1| putative copia-like retrotransposon Hopscotch pol...   182   6e-44
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   182   6e-44
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]     176   3e-42
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group...   176   3e-42
ref|XP_004967136.1| PREDICTED: uncharacterized protein LOC101762...   172   6e-41
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc...   171   8e-41
emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]   171   8e-41
gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subc...   171   1e-40
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   171   1e-40
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   169   3e-40
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group...   169   3e-40
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]   169   5e-40
gb|AAU90262.1| integrase core domain containing protein [Oryza s...   167   1e-39
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...   167   2e-39
gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subc...   167   2e-39
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              167   2e-39
emb|CAN68623.1| hypothetical protein VITISV_010681 [Vitis vinifera]   166   3e-39
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  166   5e-39
gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subc...   165   6e-39
gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Ho...   165   6e-39

>gb|AAP94600.1| putative copia-like retrotransposon Hopscotch polyprotein [Zea
           mays]
          Length = 969

 Score =  182 bits (461), Expect = 6e-44
 Identities = 86/151 (56%), Positives = 106/151 (70%)
 Frame = -3

Query: 535 FLDNNGISIRISCPHLHQQNGAAERKHGQITEMGNTLLFHASMPKYLWFDAFLSATCLIN 356
           F +  GIS  +SCPH HQQNG+AERKH  I E+G +LL HASMP   W +AFL+A  LIN
Sbjct: 441 FFNKIGISHLVSCPHAHQQNGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFLAAAYLIN 500

Query: 355 IIPTKLLQYKCPFEVLFSKVPDYSFLKIFGCMCFPNLTPYRKDKLSPKSAVCVFIGYSPF 176
             PTK+L    PFE LF K PDYS L+IFGC+C+PNL PY   KL  +S  CVF+GYS  
Sbjct: 501 RTPTKILNLDTPFERLFHKQPDYSVLRIFGCVCWPNLRPYNSHKLQFRSKQCVFLGYSSL 560

Query: 175 HKGYRCFDIRSLRVYTTTNVRFNEQAFPFAS 83
           HKG++C D+ + RVY + +V F+E  FPFAS
Sbjct: 561 HKGFKCLDVSTGRVYVSRDVTFDENFFPFAS 591


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea
           mays]
          Length = 1313

 Score =  182 bits (461), Expect = 6e-44
 Identities = 86/151 (56%), Positives = 106/151 (70%)
 Frame = -3

Query: 535 FLDNNGISIRISCPHLHQQNGAAERKHGQITEMGNTLLFHASMPKYLWFDAFLSATCLIN 356
           F +  GIS  +SCPH HQQNG+AERKH  I E+G +LL HASMP   W +AFL+A  LIN
Sbjct: 441 FFNKIGISHLVSCPHAHQQNGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFLAAAYLIN 500

Query: 355 IIPTKLLQYKCPFEVLFSKVPDYSFLKIFGCMCFPNLTPYRKDKLSPKSAVCVFIGYSPF 176
             PTK+L    PFE LF K PDYS L+IFGC+C+PNL PY   KL  +S  CVF+GYS  
Sbjct: 501 RTPTKILNLDTPFERLFHKQPDYSVLRIFGCVCWPNLRPYNSHKLQFRSKQCVFLGYSSL 560

Query: 175 HKGYRCFDIRSLRVYTTTNVRFNEQAFPFAS 83
           HKG++C D+ + RVY + +V F+E  FPFAS
Sbjct: 561 HKGFKCLDVSTGRVYVSRDVTFDENFFPFAS 591


>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1210

 Score =  176 bits (447), Expect = 3e-42
 Identities = 81/152 (53%), Positives = 107/152 (70%)
 Frame = -3

Query: 538  EFLDNNGISIRISCPHLHQQNGAAERKHGQITEMGNTLLFHASMPKYLWFDAFLSATCLI 359
            +F    GIS  +SCPH HQQNG+AERKH  I E+G +LL HASMP   W +AF++AT LI
Sbjct: 584  DFFTKIGISHHVSCPHTHQQNGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFIAATYLI 643

Query: 358  NIIPTKLLQYKCPFEVLFSKVPDYSFLKIFGCMCFPNLTPYRKDKLSPKSAVCVFIGYSP 179
            N  P+K++QY+ P E LF + P Y+ L++FGC C+PNL PY   KL  +S  CVF+GYS 
Sbjct: 644  NRTPSKVIQYETPLEHLFHQKPSYTSLRVFGCACWPNLRPYNARKLQFRSKQCVFLGYSN 703

Query: 178  FHKGYRCFDIRSLRVYTTTNVRFNEQAFPFAS 83
             HKG++C D+ + RVY + +V F+E  FPFAS
Sbjct: 704  LHKGFKCLDVAAGRVYISRDVVFDENVFPFAS 735


>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1431

 Score =  176 bits (447), Expect = 3e-42
 Identities = 80/151 (52%), Positives = 106/151 (70%)
 Frame = -3

Query: 535  FLDNNGISIRISCPHLHQQNGAAERKHGQITEMGNTLLFHASMPKYLWFDAFLSATCLIN 356
            F +  GIS  +SCPH HQQNGA ERKH  I E+G +LL HASMP   W +AFL+AT LIN
Sbjct: 581  FFNEIGISHHVSCPHTHQQNGAVERKHRHIVEVGLSLLAHASMPLKFWDEAFLAATYLIN 640

Query: 355  IIPTKLLQYKCPFEVLFSKVPDYSFLKIFGCMCFPNLTPYRKDKLSPKSAVCVFIGYSPF 176
             +P+K++++  P E LF + PDY  L+ FGC C+PNL PY   KL  +S  CVF+G+S  
Sbjct: 641  RLPSKVIKFDTPLERLFKQTPDYKSLRTFGCACWPNLRPYNTHKLQFRSKQCVFLGFSNI 700

Query: 175  HKGYRCFDIRSLRVYTTTNVRFNEQAFPFAS 83
            HKG++C D+ + RVY + +V F+EQ FPFA+
Sbjct: 701  HKGFKCLDVSTGRVYVSRDVTFDEQVFPFAN 731


>ref|XP_004967136.1| PREDICTED: uncharacterized protein LOC101762311 [Setaria italica]
          Length = 866

 Score =  172 bits (435), Expect = 6e-41
 Identities = 80/152 (52%), Positives = 104/152 (68%)
 Frame = -3

Query: 541 SEFLDNNGISIRISCPHLHQQNGAAERKHGQITEMGNTLLFHASMPKYLWFDAFLSATCL 362
           + F    GIS R+SCPH HQQNGAAERKH  I E+G  LL +ASMP   W  AFL+AT L
Sbjct: 504 NSFFKKIGISHRVSCPHTHQQNGAAERKHRHIIEVGLALLANASMPLKFWDQAFLTATYL 563

Query: 361 INIIPTKLLQYKCPFEVLFSKVPDYSFLKIFGCMCFPNLTPYRKDKLSPKSAVCVFIGYS 182
           IN++P+K++ ++ P   LF    DYS L++FGC C+PNL PY   KLS +S  C FIGYS
Sbjct: 564 INLLPSKVINFEIPATRLFGDTSDYSNLRVFGCACWPNLRPYNSHKLSFRSTQCAFIGYS 623

Query: 181 PFHKGYRCFDIRSLRVYTTTNVRFNEQAFPFA 86
             HKG++C DI + R+Y + +V F+E  FPF+
Sbjct: 624 SMHKGFKCLDISTGRIYISRDVVFDEAVFPFS 655


>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 900

 Score =  171 bits (434), Expect = 8e-41
 Identities = 81/152 (53%), Positives = 104/152 (68%)
 Frame = -3

Query: 541 SEFLDNNGISIRISCPHLHQQNGAAERKHGQITEMGNTLLFHASMPKYLWFDAFLSATCL 362
           + F    GIS  +SCPH HQQNG+AERKH  I E+G +LL HASMP   W +AFL+AT L
Sbjct: 25  NSFFQRIGISHHVSCPHAHQQNGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFLTATYL 84

Query: 361 INIIPTKLLQYKCPFEVLFSKVPDYSFLKIFGCMCFPNLTPYRKDKLSPKSAVCVFIGYS 182
           IN  P K++ Y  P   LF + PDY+ L+ FGC C+PNL PY   KL+ +S  CVF+GYS
Sbjct: 85  INRTPMKIIHYDTP-AYLFEEQPDYNALRTFGCACWPNLRPYNTHKLAFRSKQCVFLGYS 143

Query: 181 PFHKGYRCFDIRSLRVYTTTNVRFNEQAFPFA 86
           P HKG++C ++ S RVY + +V F+E  FPFA
Sbjct: 144 PLHKGFKCLEVNSGRVYISRDVVFDENIFPFA 175


>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
          Length = 1361

 Score =  171 bits (434), Expect = 8e-41
 Identities = 85/176 (48%), Positives = 114/176 (64%)
 Frame = -3

Query: 547  FRSEFLDNNGISIRISCPHLHQQNGAAERKHGQITEMGNTLLFHASMPKYLWFDAFLSAT 368
            FRS  L + GI +R++CP+   QNG  ERKH  +TE+G TL+FHA +P  LW +AF +A 
Sbjct: 555  FRSH-LHSCGIDLRLACPYTPSQNGIVERKHRYVTEIGLTLMFHARVPLSLWDEAFSTAV 613

Query: 367  CLINIIPTKLLQYKCPFEVLFSKVPDYSFLKIFGCMCFPNLTPYRKDKLSPKSAVCVFIG 188
             LIN +P   L  K P+E+LF K PDYS L+ FGC+CFP L  Y  +KLSPKS  CVF+G
Sbjct: 614  FLINRLPPPSLAGKTPYELLFGKQPDYSMLRTFGCLCFPYLRDYSPNKLSPKSTPCVFLG 673

Query: 187  YSPFHKGYRCFDIRSLRVYTTTNVRFNEQAFPFASQNMSTLDIISGNADTFLFSSA 20
            YS  HKG+RC D ++ RVY + +V+F E  FP+   N  ++  +  N D   FS +
Sbjct: 674  YSTLHKGFRCLDRKTHRVYVSRHVQFYEHTFPY---NGDSVQNLPSNIDYIHFSES 726


>gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1016

 Score =  171 bits (433), Expect = 1e-40
 Identities = 79/150 (52%), Positives = 104/150 (69%)
 Frame = -3

Query: 535 FLDNNGISIRISCPHLHQQNGAAERKHGQITEMGNTLLFHASMPKYLWFDAFLSATCLIN 356
           F    GIS  +SCP+ HQQNG+AERKH  I E+G  LL HAS+P   W +AFL+AT LIN
Sbjct: 205 FFTKIGISHHVSCPYAHQQNGSAERKHRHIVEVGLALLAHASVPLKFWDEAFLAATYLIN 264

Query: 355 IIPTKLLQYKCPFEVLFSKVPDYSFLKIFGCMCFPNLTPYRKDKLSPKSAVCVFIGYSPF 176
            +P+K++QY  P E L  + P+YS L+ FGC C+PNL PY K KL  +S  CVF+GYS  
Sbjct: 265 RLPSKVIQYSAPLERLLDQKPNYSALRTFGCACWPNLRPYNKRKLEFRSKQCVFLGYSNI 324

Query: 175 HKGYRCFDIRSLRVYTTTNVRFNEQAFPFA 86
           HKG++C D+ + RVY + +V F+E  FPF+
Sbjct: 325 HKGFKCLDVSTGRVYISRDVVFDENVFPFS 354


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|108706314|gb|ABF94109.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1247

 Score =  171 bits (432), Expect = 1e-40
 Identities = 79/153 (51%), Positives = 103/153 (67%)
 Frame = -3

Query: 541 SEFLDNNGISIRISCPHLHQQNGAAERKHGQITEMGNTLLFHASMPKYLWFDAFLSATCL 362
           + F    GI+  +SCPH HQQNG+AERKH  I EMG  LL ++SMP   W +AF SA  L
Sbjct: 390 NSFFTKIGITHHVSCPHTHQQNGSAERKHRHIVEMGLALLAYSSMPLKFWDEAFTSAVYL 449

Query: 361 INIIPTKLLQYKCPFEVLFSKVPDYSFLKIFGCMCFPNLTPYRKDKLSPKSAVCVFIGYS 182
           IN  P++LL+Y  P E LF + PDY+ L++FGC C+P+L PY   KL  +S  C F+GYS
Sbjct: 450 INRTPSRLLKYATPLERLFKQTPDYNLLRVFGCACWPHLRPYNARKLQFRSKQCTFLGYS 509

Query: 181 PFHKGYRCFDIRSLRVYTTTNVRFNEQAFPFAS 83
           P HKG++C D  + RVY + +V F+E  FPFAS
Sbjct: 510 PLHKGFKCLDPSTGRVYISHDVIFDENVFPFAS 542


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  169 bits (429), Expect = 3e-40
 Identities = 85/176 (48%), Positives = 110/176 (62%), Gaps = 1/176 (0%)
 Frame = -3

Query: 535  FLDNNGISIRISCPHLHQQNGAAERKHGQITEMGNTLLFHASMPKYLWFDAFLSATCLIN 356
            +L  NGI  R+SCPH  QQNG AERKH  I E G TLL  AS+P   W ++F +   L N
Sbjct: 660  YLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHTASLPLKFWDESFRTVVYLSN 719

Query: 355  IIPTKLLQYKCPFEVLFSKVPDYSFLKIFGCMCFPNLTPYRKDKLSPKSAVCVFIGYSPF 176
             +PT +L +KCP EVLF  +PDYSFLK+FGC CFPNL PY   KL  +S  C F+GYS  
Sbjct: 720  RLPTAILHHKCPIEVLFKSIPDYSFLKVFGCSCFPNLRPYNTHKLQYRSEECTFLGYSLK 779

Query: 175  HKGYRCFDIRSLRVYTTTNVRFNEQAFPFASQ-NMSTLDIISGNADTFLFSSATSP 11
            HKGY+C      RVY + +V FNE +FP++    +S+  + + +  T   S + SP
Sbjct: 780  HKGYKCMSSNG-RVYISHDVIFNETSFPYSKTIQVSSCLLSTVSPSTSHLSPSASP 834


>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1256

 Score =  169 bits (429), Expect = 3e-40
 Identities = 77/153 (50%), Positives = 101/153 (66%)
 Frame = -3

Query: 535 FLDNNGISIRISCPHLHQQNGAAERKHGQITEMGNTLLFHASMPKYLWFDAFLSATCLIN 356
           F +  GI+  +SCPH HQQNG+AERKH  I E+G +LL HAS+P   W +A+ S   LIN
Sbjct: 423 FFNKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLSLLAHASLPLKFWDEAYQSGVYLIN 482

Query: 355 IIPTKLLQYKCPFEVLFSKVPDYSFLKIFGCMCFPNLTPYRKDKLSPKSAVCVFIGYSPF 176
            +PTK+L Y  P E LF + PDY  L+ FGC C+P+L PY   K+  +S  C F+GYSP 
Sbjct: 483 RMPTKVLGYSSPLECLFKQTPDYQALRTFGCACWPDLRPYNSHKMHFRSKRCTFLGYSPL 542

Query: 175 HKGYRCFDIRSLRVYTTTNVRFNEQAFPFASQN 77
           HKG+RC D  + R+Y + +V F+E  FPFA  N
Sbjct: 543 HKGFRCLDSSTGRIYISRDVVFDESVFPFAELN 575


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score =  169 bits (427), Expect = 5e-40
 Identities = 82/167 (49%), Positives = 113/167 (67%), Gaps = 2/167 (1%)
 Frame = -3

Query: 547 FRS--EFLDNNGISIRISCPHLHQQNGAAERKHGQITEMGNTLLFHASMPKYLWFDAFLS 374
           FRS   + + NGI  R+SCPH  +QNG  ERKH  I E+G TLL  AS+P   W DAF +
Sbjct: 449 FRSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQASLPLKYWPDAFST 508

Query: 373 ATCLINIIPTKLLQYKCPFEVLFSKVPDYSFLKIFGCMCFPNLTPYRKDKLSPKSAVCVF 194
           A  LIN +PT++L+ KCP+E LF+  P+YS LK+FGC+CFP+L PY K KL  +S+ C F
Sbjct: 509 AVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFPHLRPYNKHKLDFRSSPCTF 568

Query: 193 IGYSPFHKGYRCFDIRSLRVYTTTNVRFNEQAFPFASQNMSTLDIIS 53
           +GYS  HKGY+C + +  R++ + +V F+E  FPFA +    + I+S
Sbjct: 569 LGYSSKHKGYKCLNQQG-RMFISRSVVFDETRFPFADRLQKPVQIVS 614


>gb|AAU90262.1| integrase core domain containing protein [Oryza sativa Japonica
           Group] gi|108710062|gb|ABF97857.1| retrotransposon
           protein, putative, Ty1-copia subclass, expressed [Oryza
           sativa Japonica Group]
          Length = 1021

 Score =  167 bits (424), Expect = 1e-39
 Identities = 77/145 (53%), Positives = 103/145 (71%)
 Frame = -3

Query: 520 GISIRISCPHLHQQNGAAERKHGQITEMGNTLLFHASMPKYLWFDAFLSATCLINIIPTK 341
           GI+  +SCP+ HQQNG+AERKH  I E+G +LL HASMP   W +AFL+AT LIN  P+K
Sbjct: 514 GITHHVSCPYAHQQNGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFLTATYLINRTPSK 573

Query: 340 LLQYKCPFEVLFSKVPDYSFLKIFGCMCFPNLTPYRKDKLSPKSAVCVFIGYSPFHKGYR 161
           ++QY  P E L ++ P+YS L+ FGC C+PNL PY   KL  +S  CVF+GYS  HKG++
Sbjct: 574 VIQYSTPLERLLNQKPNYSSLRTFGCACWPNLRPYNNRKLQFRSKQCVFLGYSNIHKGFK 633

Query: 160 CFDIRSLRVYTTTNVRFNEQAFPFA 86
           C D+ + RVY + +V F+E  FPF+
Sbjct: 634 CLDVATGRVYISRDVVFDENIFPFS 658


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
            gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1447

 Score =  167 bits (423), Expect = 2e-39
 Identities = 79/150 (52%), Positives = 102/150 (68%)
 Frame = -3

Query: 535  FLDNNGISIRISCPHLHQQNGAAERKHGQITEMGNTLLFHASMPKYLWFDAFLSATCLIN 356
            F    GI+  +SCPH HQQNG+AERKH  I E+G TLL ++SMP   W +AF +A  LIN
Sbjct: 594  FFTKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLTLLAYSSMPLKFWDEAFQAAVYLIN 653

Query: 355  IIPTKLLQYKCPFEVLFSKVPDYSFLKIFGCMCFPNLTPYRKDKLSPKSAVCVFIGYSPF 176
              PTKLLQ+  P E LF++ PDYS L++FGC C+P+L PY   KL  +S  C F+GYS  
Sbjct: 654  RTPTKLLQFLTPLEHLFNQTPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCTFLGYSTL 713

Query: 175  HKGYRCFDIRSLRVYTTTNVRFNEQAFPFA 86
            HKG++C D  + RVY + +V F+E  FPFA
Sbjct: 714  HKGFKCLDPSTGRVYISRDVIFDETNFPFA 743


>gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1145

 Score =  167 bits (422), Expect = 2e-39
 Identities = 77/152 (50%), Positives = 102/152 (67%)
 Frame = -3

Query: 541 SEFLDNNGISIRISCPHLHQQNGAAERKHGQITEMGNTLLFHASMPKYLWFDAFLSATCL 362
           + F    GI   +SCPH HQQNG+AERKH  I E+G +LL HA MP   W +AF +AT L
Sbjct: 462 NSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEVGLSLLSHAHMPLKFWDEAFQAATYL 521

Query: 361 INIIPTKLLQYKCPFEVLFSKVPDYSFLKIFGCMCFPNLTPYRKDKLSPKSAVCVFIGYS 182
           IN +P++++Q   P E  F + PDYS L++FGC C+PNL PY K KL  +S  C F+G+S
Sbjct: 522 INRVPSRVIQNTTPLEKFFHQKPDYSSLRVFGCACWPNLRPYNKHKLQFRSKRCAFLGFS 581

Query: 181 PFHKGYRCFDIRSLRVYTTTNVRFNEQAFPFA 86
             HKG++C DI S RVY + +V F+E  FPF+
Sbjct: 582 NMHKGFKCLDISSGRVYISRDVVFDENIFPFS 613


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  167 bits (422), Expect = 2e-39
 Identities = 80/165 (48%), Positives = 104/165 (63%)
 Frame = -3

Query: 535  FLDNNGISIRISCPHLHQQNGAAERKHGQITEMGNTLLFHASMPKYLWFDAFLSATCLIN 356
            +L  NGI  R SCP   +QNG AERKH  I + G TLL HA MP   W D+F +A  +IN
Sbjct: 538  YLSTNGIFQRFSCPKHPEQNGLAERKHRHIVDTGLTLLAHAHMPSTYWVDSFNTAVYIIN 597

Query: 355  IIPTKLLQYKCPFEVLFSKVPDYSFLKIFGCMCFPNLTPYRKDKLSPKSAVCVFIGYSPF 176
             +P+++L Y  P+E LF +VP Y  LK+FGC CFP L PY   KL  +S  CVF+GYS  
Sbjct: 598  RLPSRVLNYASPYEQLFHRVPQYHSLKVFGCACFPYLRPYNSSKLQLRSKRCVFLGYSLN 657

Query: 175  HKGYRCFDIRSLRVYTTTNVRFNEQAFPFASQNMSTLDIISGNAD 41
            H+GYRCFD  S RVY + +V F+E +FPF    +++   I  + D
Sbjct: 658  HQGYRCFDPSSGRVYLSRHVLFDESSFPFTEPALTSNSSIDSSTD 702


>emb|CAN68623.1| hypothetical protein VITISV_010681 [Vitis vinifera]
          Length = 846

 Score =  166 bits (420), Expect = 3e-39
 Identities = 86/177 (48%), Positives = 108/177 (61%), Gaps = 2/177 (1%)
 Frame = -3

Query: 535 FLDNNGISIRISCPHLHQQNGAAERKHGQITEMGNTLLFHASMPKYLWFDAFLSATCLIN 356
           +L  NGI  R+SCPH  QQNG AERKH  I E G TLL  AS+P   W ++F +   L N
Sbjct: 242 YLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHTASLPLKFWDESFRTVVYLSN 301

Query: 355 IIPTKLLQYKCPFEVLFSKVPDYSFLKIFGCMCFPNLTPYRKDKLSPKSAVCVFIGYSPF 176
            +PT +L +KCP EVLF  +PDYSFLK+FGC CFPNL PY   KL  +S  C F+GYS  
Sbjct: 302 RLPTAVLHHKCPIEVLFKSIPDYSFLKVFGCSCFPNLRPYNTHKLQYRSEECTFLGYSLK 361

Query: 175 HKGYRCFDIRSLRVYTTTNVRFNEQAFPFAS--QNMSTLDIISGNADTFLFSSATSP 11
           HKGY+C    + RVY + +V FNE +F ++   Q  S L      + + L  SA  P
Sbjct: 362 HKGYKCM-FSNGRVYISRDVIFNETSFSYSKTIQASSCLPSTVSPSTSHLSPSAPPP 417


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  166 bits (419), Expect = 5e-39
 Identities = 76/153 (49%), Positives = 105/153 (68%)
 Frame = -3

Query: 541  SEFLDNNGISIRISCPHLHQQNGAAERKHGQITEMGNTLLFHASMPKYLWFDAFLSATCL 362
            + F    GI   +SCPH HQQNG+AERKH  I E+G +LL +ASMP   W +AF++AT L
Sbjct: 592  NSFFAKIGIDHHVSCPHTHQQNGSAERKHRHIIEVGLSLLSYASMPLKFWDEAFVAATYL 651

Query: 361  INIIPTKLLQYKCPFEVLFSKVPDYSFLKIFGCMCFPNLTPYRKDKLSPKSAVCVFIGYS 182
            IN +P+K +Q   P E LF++ PDY  L++FGC C+P+L PY   KL  +S  CVF+G+S
Sbjct: 652  INRVPSKTIQNSTPLEKLFNQKPDYLSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFS 711

Query: 181  PFHKGYRCFDIRSLRVYTTTNVRFNEQAFPFAS 83
              HKG++C D+ S RVY + +V F+E  FPF++
Sbjct: 712  THHKGFKCLDVSSGRVYISRDVVFDENIFPFST 744


>gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1177

 Score =  165 bits (418), Expect = 6e-39
 Identities = 75/152 (49%), Positives = 103/152 (67%)
 Frame = -3

Query: 541 SEFLDNNGISIRISCPHLHQQNGAAERKHGQITEMGNTLLFHASMPKYLWFDAFLSATCL 362
           + F    GI+ ++SCPH HQQNGA ERKH  I E+G +LL HASMP   W +AFL+AT L
Sbjct: 469 NSFFKQIGIAHQVSCPHTHQQNGAVERKHRHIVEIGLSLLAHASMPLKFWDEAFLAATYL 528

Query: 361 INIIPTKLLQYKCPFEVLFSKVPDYSFLKIFGCMCFPNLTPYRKDKLSPKSAVCVFIGYS 182
           IN +P K++ +  P   LF + PDY  L+ FGC C+PNL PY   KL  +S  CVF+G+S
Sbjct: 529 INRLPRKVIDFDTPLARLFHQQPDYKSLRTFGCACWPNLRPYNTHKLQFRSKQCVFLGFS 588

Query: 181 PFHKGYRCFDIRSLRVYTTTNVRFNEQAFPFA 86
             HKG++C ++ + +VY + +V F+EQ FPF+
Sbjct: 589 NLHKGFKCLEVATGQVYISRDVTFDEQEFPFS 620


>gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
            sativa Japonica Group]
            gi|14718304|gb|AAK72882.1|AC091123_1 putative gag-pol
            protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  165 bits (418), Expect = 6e-39
 Identities = 75/152 (49%), Positives = 103/152 (67%)
 Frame = -3

Query: 541  SEFLDNNGISIRISCPHLHQQNGAAERKHGQITEMGNTLLFHASMPKYLWFDAFLSATCL 362
            + F    GI+ ++SCPH HQQNGA ERKH  I E+G +LL HASMP   W +AFL+AT L
Sbjct: 580  NSFFKQIGIAHQVSCPHTHQQNGAVERKHRHIVEIGLSLLAHASMPLKFWDEAFLAATYL 639

Query: 361  INIIPTKLLQYKCPFEVLFSKVPDYSFLKIFGCMCFPNLTPYRKDKLSPKSAVCVFIGYS 182
            IN +P K++ +  P   LF + PDY  L+ FGC C+PNL PY   KL  +S  CVF+G+S
Sbjct: 640  INRLPRKVIDFDTPLARLFHQQPDYKSLRTFGCACWPNLRPYNTHKLQFRSKQCVFLGFS 699

Query: 181  PFHKGYRCFDIRSLRVYTTTNVRFNEQAFPFA 86
              HKG++C ++ + +VY + +V F+EQ FPF+
Sbjct: 700  NLHKGFKCLEVATGQVYISRDVTFDEQEFPFS 731


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