BLASTX nr result

ID: Papaver27_contig00048499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00048499
         (1111 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    69   3e-11
ref|XP_004308707.1| PREDICTED: putative ribonuclease H protein A...    49   5e-07
gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlise...    53   8e-07
gb|EPS73861.1| hypothetical protein M569_00896, partial [Genlise...    47   6e-06
gb|ABN07997.1| contains similarity to reverse trancriptase , rel...    58   8e-06

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 69.3 bits (168), Expect(3) = 3e-11
 Identities = 60/211 (28%), Positives = 91/211 (43%), Gaps = 24/211 (11%)
 Frame = +1

Query: 145  VVWDGKSINVWSDPWIPSILGFEPRVRMAHQQSY*FSN*RRGQVECSVGSK--------- 297
            V+ DG+   +W DPW+PS+     R  +A  +    S     Q  C + S          
Sbjct: 934  VIGDGRDTTIWGDPWVPSL----ERYSIAATEGV--SEDDGPQKVCELISNDRWNVELLN 987

Query: 298  VLIILWIFTSTRRI---------KFIWTLTPLGNFTPQS--YQKLLAFDSDESSSTNDHN 444
             L   W  T+ +RI         +++W ++  G FT +S  Y +LL       S++   N
Sbjct: 988  TLFQPWESTAIQRIPVALQKKPDQWMWMMSKNGQFTVRSAYYHELLEDRKTGPSTSRGPN 1047

Query: 445  FP-WKSFWKSKPIAPKIHMFMCSVLRDGIGVSA---KVGKYIDGGPRECHLCQSAEETTS 612
               W+  WK+K I PK+ +F    + +G+ V     K G  IDG    C  C   EETT 
Sbjct: 1048 LKLWQKIWKAK-IPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGA---CPRCGEKEETTE 1103

Query: 613  YLFI*CPVTQALLFASPLNISTSFLQRHSVR 705
            +L   C  +    + SPL I T  ++  S R
Sbjct: 1104 HLIWGCDESSRAWYISPLRIHTGNIEAGSFR 1134



 Score = 23.5 bits (49), Expect(3) = 3e-11
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = +3

Query: 12   WRFLSEPNSLEA-----KYLMNTCFWSTNMPLKCCATWEAILNSR 131
            WR L++P+SL A     KY   + F    +      T ++IL++R
Sbjct: 880  WRILTKPDSLMARVIKGKYFPRSNFLEARVSPNMSFTCKSILSAR 924



 Score = 22.7 bits (47), Expect(3) = 3e-11
 Identities = 14/70 (20%), Positives = 30/70 (42%)
 Frame = +2

Query: 791  RNRYVFDQIPINFNSIIKDGLFWFNSYENTEXXXXXXXXXXXXMPQNKSVPSQWTTASPS 970
            RN++VF++  + F  +++  +     +E               +    +  + W+     
Sbjct: 1164 RNKWVFEKKKLAFQEVVERAVRGVMEFEEE-------CAHTSPVETLNTHENGWSVPPVG 1216

Query: 971  HIKINVDAAV 1000
             +K+NVDAAV
Sbjct: 1217 MVKLNVDAAV 1226


>ref|XP_004308707.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 498

 Score = 48.5 bits (114), Expect(2) = 5e-07
 Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 15/191 (7%)
 Frame = +1

Query: 148 VWDGKSINVWSDPWIPSILGFEPR------VRMAHQQSY*FSN*RRGQVECSV-GSKVLI 306
           V DG  I +W+D WIP +  +         ++  H+     S     QV  S+    + +
Sbjct: 62  VGDGTQIQIWTDDWIPEVPRYRVHKPPNCEIQFVHELINHDSRTWNVQVISSLFPPDITL 121

Query: 307 ILWIFTSTRRI---KFIWTLTPLGNFTPQSY----QKLLAFDSDESSSTNDHNFP-WKSF 462
            +     +RR+   + IW     G +T +S     +  +  ++  S+S+ +   P WK  
Sbjct: 122 QICSIPLSRRVLTDRVIWKPEKRGFYTVKSAYWIARSTVMPNALASTSSGNAFLPLWKKL 181

Query: 463 WKSKPIAPKIHMFMCSVLRDGIGVSAKVGKYIDGGPRECHLCQSAEETTSYLFI*CPVTQ 642
           WK++ +  K+         D +   AK+      G  +C  C    ETT++L   CP+ Q
Sbjct: 182 WKAR-VPGKVMHCAWRACHDLLPTRAKLVTKGYEGTLKCLSCPHPCETTAHLVCACPIAQ 240

Query: 643 ALLFASPLNIS 675
            +L  S LNI+
Sbjct: 241 TILLGSHLNIT 251



 Score = 33.1 bits (74), Expect(2) = 5e-07
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
 Frame = +3

Query: 12  WRFLSEPNSL-----EAKYLMNTCFWSTNMPLKCCATWEAILNSRQQVICCLGW 158
           WR +  PNSL     +A+Y     FW  N+      +W +I+ SR  +   + W
Sbjct: 7   WRIVKNPNSLVAQIFKARYYPYCSFWEANLSDSPSFSWRSIVQSRPVLAAGVHW 60


>gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlisea aurea]
          Length = 1503

 Score = 52.8 bits (125), Expect(2) = 8e-07
 Identities = 41/187 (21%), Positives = 77/187 (41%), Gaps = 23/187 (12%)
 Frame = +1

Query: 142  YVVWDGKSINVWSDPWIPSILGFEPRVRMAHQQSY*FSN*RRGQVECSVGSKV------- 300
            +++ DG S+++W DPWIP    F+P   +  +        RR  V   + S+        
Sbjct: 1262 HLIGDGSSVDIWHDPWIPKPPTFKPTNLLGER--------RRASVATLIDSRTKWWDVGR 1313

Query: 301  ------------LIILWIFTSTRRIKFIWTLTPLGNFTPQS-YQKLLAFDSDESSSTNDH 441
                        +I + +  S    K +W  +  G +T +S Y  + +   + SSS++D 
Sbjct: 1314 IREKFDPVDANHIISIPLSESPSEDKILWHYSKSGTYTVRSAYHLVRSLRVEVSSSSSDS 1373

Query: 442  NFP---WKSFWKSKPIAPKIHMFMCSVLRDGIGVSAKVGKYIDGGPRECHLCQSAEETTS 612
                  W   WK     PKI +FM  +    +  +  + +      +EC +C +  E+  
Sbjct: 1374 RVTPKVWDLIWK-HACCPKIGLFMWRLAHGCLPTNETLWRRRIPIDKECSICLNRTESDR 1432

Query: 613  YLFI*CP 633
            ++ + CP
Sbjct: 1433 HILLECP 1439



 Score = 28.1 bits (61), Expect(2) = 8e-07
 Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
 Frame = +3

Query: 12   WRFLSEPNSL-----EAKYLMNTCFWSTNMPLKCCATWEAILNSRQQV 140
            WR  S P+S+      AKY  N   W+     +    W  I+ SR  V
Sbjct: 1209 WRIASAPHSILSRVFRAKYFPNGDIWTARPCARGSYVWNGIMKSRDLV 1256


>gb|EPS73861.1| hypothetical protein M569_00896, partial [Genlisea aurea]
          Length = 1651

 Score = 47.4 bits (111), Expect(2) = 6e-06
 Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 17/184 (9%)
 Frame = +1

Query: 148  VWDGKSINVWSDPWIPSILGFEPR------VRMAHQQSY*FSN------*RRGQVECSVG 291
            + +G S++ W DPWIP+   F+P       V     + +  SN       R  Q+   + 
Sbjct: 1237 IGNGLSVDAWKDPWIPNTFAFKPTSAAPQGVGSILVKDFILSNHSGWNHTRLRQIFSPLD 1296

Query: 292  SKVLIILWIFTSTRRIKFIWTLTPLGNFTPQSYQKLLAFDSD---ESSSTNDHN--FPWK 456
             K ++ + +  ++   + IW  T  G ++ ++  +LL    D    SSS  +H+    W+
Sbjct: 1297 VKHILSIPLAKNSCPDRLIWHYTRHGEYSVKTGYQLLKGREDMLRPSSSQVNHDCILMWR 1356

Query: 457  SFWKSKPIAPKIHMFMCSVLRDGIGVSAKVGKYIDGGPRECHLCQSAEETTSYLFI*CPV 636
            + WK + +  +I  F     ++ + +   + +   G    C +C+   E+  + F+ CP 
Sbjct: 1357 ALWKLQ-LPTRILTFGWRFAKNILPLKENLVRRRVGTDPTCPVCEMDRESWYHAFLTCPF 1415

Query: 637  TQAL 648
            +QA+
Sbjct: 1416 SQAV 1419



 Score = 30.4 bits (67), Expect(2) = 6e-06
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
 Frame = +3

Query: 12   WRFLSEPNS-----LEAKYLMNTCFWSTNMPLKCCATWEAILNSRQQVICCLGW 158
            WR LS PNS     ++AKY  ++ F    +       W  I +SR+ ++  L W
Sbjct: 1182 WRLLSHPNSICSRLIKAKYYPHSSFLMAPLGRSPSYVWRGIHSSREVLLGGLRW 1235


>gb|ABN07997.1| contains similarity to reverse trancriptase , related [Medicago
           truncatula]
          Length = 407

 Score = 57.8 bits (138), Expect = 8e-06
 Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 16/192 (8%)
 Frame = +1

Query: 148 VWDGKSINVWSDPWIPSILG-----------FEPRVR-MAHQQSY*FSN*RRGQVECSVG 291
           + DG SIN+W D W+P+  G           F  RV+ + + Q   ++         S+ 
Sbjct: 206 IGDGGSINIWEDNWVPTYKGLKVMTTKGPNHFVNRVKDLINNQESLWNKVILEDQFISIN 265

Query: 292 SKVLIILWIFTSTRRIKFIWTLTPLGNFTPQS-YQKLLAFDSDE---SSSTNDHNFPWKS 459
              +  + +  +T     +W   P G ++ +S Y  L  + + +   +S+++D    WK 
Sbjct: 266 IDQISHIPLVNTTNPDSLMWMHNPTGIYSVKSGYNTLRTWQTQQINNTSTSSDETLIWKK 325

Query: 460 FWKSKPIAPKIHMFMCSVLRDGIGVSAKVGKYIDGGPRECHLCQSAEETTSYLFI*CPVT 639
            W    I P+  + +  +L D + V + + K        C  C S  ET ++LF+ CP++
Sbjct: 326 IWSLHTI-PRHKVLLWRILNDSLPVRSSLRKRGIQCYPLCPRCHSKTETITHLFMSCPLS 384

Query: 640 QALLFASPLNIS 675
           + + F S L I+
Sbjct: 385 KRVWFGSNLCIN 396


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