BLASTX nr result
ID: Papaver27_contig00047912
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00047912
(468 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278861.2| PREDICTED: uncharacterized protein LOC100250... 55 1e-09
emb|CBI33920.3| unnamed protein product [Vitis vinifera] 55 1e-09
ref|XP_002532972.1| RNA-binding protein, putative [Ricinus commu... 48 2e-07
ref|XP_004148916.1| PREDICTED: uncharacterized protein LOC101209... 52 1e-06
ref|XP_006481940.1| PREDICTED: RNA-binding protein 5-like isofor... 42 1e-06
ref|XP_006481941.1| PREDICTED: RNA-binding protein 5-like isofor... 42 1e-06
ref|XP_004167561.1| PREDICTED: uncharacterized protein LOC101227... 52 1e-06
>ref|XP_002278861.2| PREDICTED: uncharacterized protein LOC100250662 [Vitis vinifera]
Length = 1105
Score = 54.7 bits (130), Expect(2) = 1e-09
Identities = 38/96 (39%), Positives = 45/96 (46%), Gaps = 22/96 (22%)
Frame = +1
Query: 247 DEPSIYGSDFRRRNTYD--------SWERDQFPGWRREHPWPRGHDYHQRSRSPRVRSHN 402
D S ++RRR + D S ERDQ P + E RG + RSRSPR RSH
Sbjct: 229 DRGSRRDGNWRRRESRDRERDKRGLSRERDQSPPRKHERSRSRGREDRPRSRSPRGRSHG 288
Query: 403 RSDRDVTYD--------------HKRNHEHSSVVPS 468
RS R+ +YD KR HEH SV PS
Sbjct: 289 RSHREDSYDDGRHERSEKRRDREDKRQHEHYSVAPS 324
Score = 33.1 bits (74), Expect(2) = 1e-09
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 87 RDAIYSRDCYSSDHGVARPARFAGRNDDN--FLPLDYHQHCTSQS-T*SREESHDYG 248
RD D Y DHG RP+RF R+ D+ + DY + Q+ SRE +DYG
Sbjct: 165 RDGYRGIDNYR-DHGFDRPSRFGARDRDDHAYDDYDYRSRLSHQNREDSRERDYDYG 220
>emb|CBI33920.3| unnamed protein product [Vitis vinifera]
Length = 1029
Score = 54.7 bits (130), Expect(2) = 1e-09
Identities = 38/96 (39%), Positives = 45/96 (46%), Gaps = 22/96 (22%)
Frame = +1
Query: 247 DEPSIYGSDFRRRNTYD--------SWERDQFPGWRREHPWPRGHDYHQRSRSPRVRSHN 402
D S ++RRR + D S ERDQ P + E RG + RSRSPR RSH
Sbjct: 194 DRGSRRDGNWRRRESRDRERDKRGLSRERDQSPPRKHERSRSRGREDRPRSRSPRGRSHG 253
Query: 403 RSDRDVTYD--------------HKRNHEHSSVVPS 468
RS R+ +YD KR HEH SV PS
Sbjct: 254 RSHREDSYDDGRHERSEKRRDREDKRQHEHYSVAPS 289
Score = 33.1 bits (74), Expect(2) = 1e-09
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 87 RDAIYSRDCYSSDHGVARPARFAGRNDDN--FLPLDYHQHCTSQS-T*SREESHDYG 248
RD D Y DHG RP+RF R+ D+ + DY + Q+ SRE +DYG
Sbjct: 130 RDGYRGIDNYR-DHGFDRPSRFGARDRDDHAYDDYDYRSRLSHQNREDSRERDYDYG 185
>ref|XP_002532972.1| RNA-binding protein, putative [Ricinus communis]
gi|223527250|gb|EEF29409.1| RNA-binding protein,
putative [Ricinus communis]
Length = 962
Score = 47.8 bits (112), Expect(2) = 2e-07
Identities = 29/55 (52%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +1
Query: 277 RRRNTYD-SWERDQFPGWRREHPWPRGHDYHQRSRSPRVRSHNRSDRDVTYDHKR 438
R R+ D S ERDQ P R E RG D RSRSPR RSH RS R+ +YD R
Sbjct: 106 RERDKRDLSRERDQSPRRRHERSRSRGRDDCPRSRSPRGRSHGRSQREDSYDDGR 160
Score = 32.7 bits (73), Expect(2) = 2e-07
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +3
Query: 87 RDAIYSRDCYSSDHGVARPARFAGRNDDNFLPLDYHQHCTSQST*SREESHD 242
RD + D Y D G RP RF GR+ D++ P D + + S+ SRE S D
Sbjct: 25 RDGYRNMDNYR-DQGFDRPVRFGGRDRDDY-PYDDYDYRPRVSSQSREVSSD 74
>ref|XP_004148916.1| PREDICTED: uncharacterized protein LOC101209801 [Cucumis sativus]
Length = 1048
Score = 51.6 bits (122), Expect(2) = 1e-06
Identities = 31/80 (38%), Positives = 37/80 (46%), Gaps = 14/80 (17%)
Frame = +1
Query: 271 DFRRRNTYDSWERDQFPGWRREHPWPRGHDYHQRSRSPRVRSHNRSDRDVTY-------- 426
D R SW+RD P R + RG D RSRSPR RSH R+ R+ +Y
Sbjct: 205 DRERDKRCSSWDRDPSPHRRHDRSKSRGRDGRSRSRSPRGRSHGRNYREDSYEDNRHERS 264
Query: 427 ------DHKRNHEHSSVVPS 468
+ KR EH SV PS
Sbjct: 265 ERRRDREEKREREHYSVAPS 284
Score = 26.6 bits (57), Expect(2) = 1e-06
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 8/56 (14%)
Frame = +3
Query: 105 RDCYSS-----DHGVARPARFAGRNDDNFL--PLDYHQHCTSQS-T*SREESHDYG 248
RD Y S DHG+ R RF R D++ DY + Q S E +DYG
Sbjct: 125 RDDYRSLSNVHDHGIDRLDRFGSRERDDYSYDDYDYKSNVAHQKRDDSYERDYDYG 180
>ref|XP_006481940.1| PREDICTED: RNA-binding protein 5-like isoform X1 [Citrus sinensis]
Length = 1047
Score = 42.0 bits (97), Expect(2) = 1e-06
Identities = 30/79 (37%), Positives = 35/79 (44%), Gaps = 22/79 (27%)
Frame = +1
Query: 298 SWERDQFPGWRREHPWPR--------GHDYHQRSRSPRVRSHNRSDRDVTYD-------- 429
S ER+ P R EH R G D RSRSPR RSH RS R+ +YD
Sbjct: 206 SRERELSPRRRHEHSASRSQSRSRSRGRDDRPRSRSPRGRSHGRSHREDSYDDGRYERIE 265
Query: 430 ------HKRNHEHSSVVPS 468
+R EH +V PS
Sbjct: 266 KRRDREERRQREHYAVAPS 284
Score = 36.2 bits (82), Expect(2) = 1e-06
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 123 DHGVARPARFAGRNDDNFLPLDYHQHCTSQS-T*SREESHDYG 248
DHG RP RF GR+ D++ DY + QS SRE D+G
Sbjct: 130 DHGFERPPRFGGRDRDDYDDYDYRSRSSHQSREDSREGDCDFG 172
>ref|XP_006481941.1| PREDICTED: RNA-binding protein 5-like isoform X2 [Citrus sinensis]
Length = 1046
Score = 42.0 bits (97), Expect(2) = 1e-06
Identities = 30/79 (37%), Positives = 35/79 (44%), Gaps = 22/79 (27%)
Frame = +1
Query: 298 SWERDQFPGWRREHPWPR--------GHDYHQRSRSPRVRSHNRSDRDVTYD-------- 429
S ER+ P R EH R G D RSRSPR RSH RS R+ +YD
Sbjct: 206 SRERELSPRRRHEHSASRSQSRSRSRGRDDRPRSRSPRGRSHGRSHREDSYDDGRYERIE 265
Query: 430 ------HKRNHEHSSVVPS 468
+R EH +V PS
Sbjct: 266 KRRDREERRQREHYAVAPS 284
Score = 36.2 bits (82), Expect(2) = 1e-06
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 123 DHGVARPARFAGRNDDNFLPLDYHQHCTSQS-T*SREESHDYG 248
DHG RP RF GR+ D++ DY + QS SRE D+G
Sbjct: 130 DHGFERPPRFGGRDRDDYDDYDYRSRSSHQSREDSREGDCDFG 172
>ref|XP_004167561.1| PREDICTED: uncharacterized protein LOC101227839, partial [Cucumis
sativus]
Length = 595
Score = 51.6 bits (122), Expect(2) = 1e-06
Identities = 31/80 (38%), Positives = 37/80 (46%), Gaps = 14/80 (17%)
Frame = +1
Query: 271 DFRRRNTYDSWERDQFPGWRREHPWPRGHDYHQRSRSPRVRSHNRSDRDVTY-------- 426
D R SW+RD P R + RG D RSRSPR RSH R+ R+ +Y
Sbjct: 205 DRERDKRCSSWDRDPSPHRRHDRSKSRGRDGRSRSRSPRGRSHGRNYREDSYEDNRHERS 264
Query: 427 ------DHKRNHEHSSVVPS 468
+ KR EH SV PS
Sbjct: 265 ERRRDREEKREREHYSVAPS 284
Score = 26.6 bits (57), Expect(2) = 1e-06
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 8/56 (14%)
Frame = +3
Query: 105 RDCYSS-----DHGVARPARFAGRNDDNFL--PLDYHQHCTSQS-T*SREESHDYG 248
RD Y S DHG+ R RF R D++ DY + Q S E +DYG
Sbjct: 125 RDDYRSLSNVHDHGIDRLDRFGSRERDDYSYDDYDYKSNVAHQKRDDSYERDYDYG 180