BLASTX nr result

ID: Papaver27_contig00047747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00047747
         (1644 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004485517.1| PREDICTED: mRNA turnover protein 4 homolog [...    43   4e-07
gb|EPS65449.1| hypothetical protein M569_09326, partial [Genlise...    44   2e-06
ref|XP_004147379.1| PREDICTED: mRNA turnover protein 4 homolog [...    40   6e-06

>ref|XP_004485517.1| PREDICTED: mRNA turnover protein 4 homolog [Cicer arietinum]
          Length = 229

 Score = 43.1 bits (100), Expect(3) = 4e-07
 Identities = 28/91 (30%), Positives = 49/91 (53%)
 Frame = -3

Query: 841 RDDVGVLVTNKTEDQILRKGKFRAYEEFDFAKPGNTPSETLTYAEGAVLRLPTNISAEKL 662
           R D G++ TN  ++++ R   F  +EE+DFA+ G   +E +   EG     P      ++
Sbjct: 98  RGDAGMVFTNLPKEEVERL--FNGFEEYDFARTGGISTEKVELKEG-----PLEQFTHEM 150

Query: 661 FPILQELEMPVKLTNDGRVIEMTQAYTVVKK 569
            P L++  MPV+L N G V+E+   + V ++
Sbjct: 151 EPFLRKQGMPVRL-NKG-VVELVSDFVVCEE 179



 Score = 31.2 bits (69), Expect(3) = 4e-07
 Identities = 17/56 (30%), Positives = 31/56 (55%)
 Frame = -2

Query: 1112 VLLMQRFRVPSTRNFLGSLADNFSRVYIGCNTDLSMALMLSETSELKPGLRRISSV 945
            V   +  R    ++F  +L  + SR ++G N  + +AL  S + E+KPGL ++S +
Sbjct: 42   VFSFENMRNQKLKDFRETLKSS-SRFFLGSNKVMQVALGRSASDEIKPGLYKVSKL 96



 Score = 27.7 bits (60), Expect(3) = 4e-07
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -2

Query: 593 SSLYCCKEKMRVTENASNILKHLNKKMFNYTVLPVCRW 480
           S    C+E   ++  AS IL+ +  KM  + +  +CRW
Sbjct: 172 SDFVVCEEGKPLSPEASRILRLMGIKMATFKLHLICRW 209


>gb|EPS65449.1| hypothetical protein M569_09326, partial [Genlisea aurea]
          Length = 228

 Score = 43.9 bits (102), Expect(3) = 2e-06
 Identities = 28/91 (30%), Positives = 52/91 (57%)
 Frame = -3

Query: 841 RDDVGVLVTNKTEDQILRKGKFRAYEEFDFAKPGNTPSETLTYAEGAVLRLPTNISAEKL 662
           R + G+  T+  ++++ R   F  YEE+D+++ GN+ +ET+   EG     P +    ++
Sbjct: 98  RGNSGLCFTSLPKEEVERL--FNEYEEYDYSRTGNSATETVELKEG-----PLDQFTHEM 150

Query: 661 FPILQELEMPVKLTNDGRVIEMTQAYTVVKK 569
            P L++  MPV+L N G V+E+   Y V ++
Sbjct: 151 EPFLRKQGMPVRL-NKG-VVELVSDYVVCEE 179



 Score = 33.5 bits (75), Expect(3) = 2e-06
 Identities = 21/58 (36%), Positives = 32/58 (55%)
 Frame = -2

Query: 1124 FMFSVLLMQRFRVPSTRNFLGSLADNFSRVYIGCNTDLSMALMLSETSELKPGLRRIS 951
            ++FS   M+  +    R  L S     SR ++G N  + +AL  SE+ E+KPGL +IS
Sbjct: 41   YVFSFENMRNLKFKEFREQLKSS----SRFFLGSNKVMQVALGRSESDEIKPGLYKIS 94



 Score = 21.9 bits (45), Expect(3) = 2e-06
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -2

Query: 593 SSLYCCKEKMRVTENASNILKHLNKKMFNYTVLPVCR 483
           S    C+E   ++  A+ IL+ L  +M  + +  VCR
Sbjct: 172 SDYVVCEEGKPLSPEAARILRLLGIRMATFKLHLVCR 208


>ref|XP_004147379.1| PREDICTED: mRNA turnover protein 4 homolog [Cucumis sativus]
          Length = 249

 Score = 40.4 bits (93), Expect(3) = 6e-06
 Identities = 26/89 (29%), Positives = 50/89 (56%)
 Frame = -3

Query: 835 DVGVLVTNKTEDQILRKGKFRAYEEFDFAKPGNTPSETLTYAEGAVLRLPTNISAEKLFP 656
           + G+  TN  ++++ R   F  YE++D+A+ G+  SE +   EG     P    + ++ P
Sbjct: 120 NTGLCFTNLPKEEVERL--FNEYEDYDYARTGSAASEKVELKEG-----PLGQFSHEMEP 172

Query: 655 ILQELEMPVKLTNDGRVIEMTQAYTVVKK 569
            L++L +PV+L N G V+E+   + V ++
Sbjct: 173 SLRKLGLPVRL-NKG-VVELVSDFVVCEE 199



 Score = 33.9 bits (76), Expect(3) = 6e-06
 Identities = 18/60 (30%), Positives = 34/60 (56%)
 Frame = -2

Query: 1124 FMFSVLLMQRFRVPSTRNFLGSLADNFSRVYIGCNTDLSMALMLSETSELKPGLRRISSV 945
            F+F+V  M+  +    R  L S     SR++ G N  + ++L  S++ E++PGL ++S +
Sbjct: 61   FVFTVENMRNLKFKELREQLKST----SRLFFGANKVMQISLGRSDSDEIRPGLHKVSKL 116



 Score = 23.5 bits (49), Expect(3) = 6e-06
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = -2

Query: 593 SSLYCCKEKMRVTENASNILKHLNKKMFNYTVLPVCRWA 477
           S    C+E   ++  ++ IL+ L  +   + +  VCRW+
Sbjct: 192 SDFVVCEEGKSLSPESAGILRALGLRTAIFRLNLVCRWS 230


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