BLASTX nr result

ID: Papaver27_contig00047663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00047663
         (500 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007207581.1| hypothetical protein PRUPE_ppa018489mg, part...    56   5e-06
gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebenn...    56   6e-06
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...    55   8e-06

>ref|XP_007207581.1| hypothetical protein PRUPE_ppa018489mg, partial [Prunus persica]
           gi|462403223|gb|EMJ08780.1| hypothetical protein
           PRUPE_ppa018489mg, partial [Prunus persica]
          Length = 1146

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/107 (32%), Positives = 54/107 (50%)
 Frame = -2

Query: 487 QNLGNSKKVVFGNPNKKIKLLLKVIDNLNAQPTSVAVSSLTNKKILELEALYDTQEEIAR 308
           + L    K  F N   +I LL+K + NL + P         +    E+  L+  +E   +
Sbjct: 189 EELQKWSKEKFPNNLSRINLLMKSLSNLQSGPLEENYRHQESAIWDEMSVLWSREETYWK 248

Query: 307 QQSRNNTIALGERNTTFFFHVTTLKRRKRNHIECIQDKDNKVVSTRQ 167
           Q+SR N ++ G+ NT FF H TTL+RR+RN IE +   +   +S  Q
Sbjct: 249 QRSRLNWLSAGDANTKFF-HTTTLQRRQRNKIETLLKSEGNCISGDQ 294


>gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebennensis]
          Length = 464

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
 Frame = -2

Query: 487 QNLGNSKKVVFGNPNKKIKLLLKVIDNLNAQPTSVAVSSLTNKK---ILELEALYDTQEE 317
           + L    K VFGN  ++   L++ I  +           L NK+   I E E + + +E 
Sbjct: 248 EKLKKWNKEVFGNIQQRKDKLVQEIQAVQDFLEHNQTDDLLNKEDVLIKEFEVVLEQEEI 307

Query: 316 IARQQSRNNTIALGERNTTFFFHVTTLKRRKRNHIECIQDKDNKVV 179
           +  Q+SR   IALG+RNT  +FH +T+ RR+RN IE ++D + K V
Sbjct: 308 VWFQKSREKWIALGDRNTK-YFHTSTIIRRRRNQIEMLKDDEGKWV 352


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268307|emb|CAB78601.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 929

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 34/103 (33%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
 Frame = -2

Query: 466 KVVFGNPN---KKIKLLLKVIDNLNAQPTSVAVSSLTNKKILELEALYDTQEEIARQQSR 296
           K VFGN +   +K+   LK + +L     +  +    +  + E + L   +E +  Q+SR
Sbjct: 97  KEVFGNIHVRKEKVVSDLKAVQDLLEVVQTDDLLMKEDTLLKEFDVLLHQEETLWFQKSR 156

Query: 295 NNTIALGERNTTFFFHVTTLKRRKRNHIECIQDKDNKVVSTRQ 167
              +ALG+RNTT FFH +T+ RR+RN IE ++D +++ V+ ++
Sbjct: 157 EKLLALGDRNTT-FFHTSTVIRRRRNRIEMLKDSEDRWVTEKE 198


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