BLASTX nr result

ID: Papaver27_contig00046873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00046873
         (405 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20033.3| unnamed protein product [Vitis vinifera]               69   7e-10
ref|XP_002268032.1| PREDICTED: pentatricopeptide repeat-containi...    69   7e-10
emb|CBI25159.3| unnamed protein product [Vitis vinifera]               65   8e-09
ref|XP_002264269.1| PREDICTED: pentatricopeptide repeat-containi...    65   8e-09

>emb|CBI20033.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 36/78 (46%), Positives = 47/78 (60%)
 Frame = +1

Query: 172 MAFRKLPKPITKTLQSSSTLFPPVPNSNVNKPEPFNIPLPTVSLSQTSQQELLEFLKSHL 351
           MA  KL + + K L   S   PP  + N+      + P+PT+SL+ TS  +L +FLK+HL
Sbjct: 32  MAMNKLRQTLPKPLHPPSQFTPPTASPNLIS----STPIPTLSLANTSHHQLHQFLKAHL 87

Query: 352 KPSFTPHDLFIFLHKKLH 405
            PSFTP DL IFL  KLH
Sbjct: 88  TPSFTPQDLLIFLKNKLH 105


>ref|XP_002268032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36240-like [Vitis vinifera]
          Length = 480

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 36/78 (46%), Positives = 47/78 (60%)
 Frame = +1

Query: 172 MAFRKLPKPITKTLQSSSTLFPPVPNSNVNKPEPFNIPLPTVSLSQTSQQELLEFLKSHL 351
           MA  KL + + K L   S   PP  + N+      + P+PT+SL+ TS  +L +FLK+HL
Sbjct: 1   MAMNKLRQTLPKPLHPPSQFTPPTASPNLIS----STPIPTLSLANTSHHQLHQFLKAHL 56

Query: 352 KPSFTPHDLFIFLHKKLH 405
            PSFTP DL IFL  KLH
Sbjct: 57  TPSFTPQDLLIFLKNKLH 74


>emb|CBI25159.3| unnamed protein product [Vitis vinifera]
          Length = 605

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
 Frame = +1

Query: 163 IHTMAFRK-LPKPITKTLQSSSTLFPPVPNSNVNKPEPFNIPLPTVSLSQTSQQELLEFL 339
           +HT  FRK LPKP    L   S   PP  + N+      + P+PT+SL+ TS  +L +FL
Sbjct: 111 LHT--FRKTLPKP----LHPLSQFTPPTASPNLIP----STPIPTLSLANTSHHQLHQFL 160

Query: 340 KSHLKPSFTPHDLFIFLHKKLH 405
           K+HL PSFTP DL IFL  KLH
Sbjct: 161 KAHLTPSFTPQDLLIFLKNKLH 182


>ref|XP_002264269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36240-like [Vitis vinifera]
          Length = 588

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
 Frame = +1

Query: 163 IHTMAFRK-LPKPITKTLQSSSTLFPPVPNSNVNKPEPFNIPLPTVSLSQTSQQELLEFL 339
           +HT  FRK LPKP    L   S   PP  + N+      + P+PT+SL+ TS  +L +FL
Sbjct: 111 LHT--FRKTLPKP----LHPLSQFTPPTASPNLIP----STPIPTLSLANTSHHQLHQFL 160

Query: 340 KSHLKPSFTPHDLFIFLHKKLH 405
           K+HL PSFTP DL IFL  KLH
Sbjct: 161 KAHLTPSFTPQDLLIFLKNKLH 182


Top