BLASTX nr result
ID: Papaver27_contig00046603
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00046603
(1468 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007210987.1| hypothetical protein PRUPE_ppa021345mg [Prun... 174 1e-40
ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein A... 166 2e-38
ref|XP_007219602.1| hypothetical protein PRUPE_ppa023113mg, part... 164 7e-38
ref|XP_007207581.1| hypothetical protein PRUPE_ppa018489mg, part... 164 9e-38
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 164 1e-37
ref|XP_004292563.1| PREDICTED: putative ribonuclease H protein A... 162 3e-37
ref|XP_007199601.1| hypothetical protein PRUPE_ppa023095mg, part... 160 1e-36
ref|XP_004292479.1| PREDICTED: putative ribonuclease H protein A... 159 3e-36
ref|XP_007036869.1| Ribonuclease H-like superfamily protein [The... 150 1e-33
ref|XP_007219414.1| hypothetical protein PRUPE_ppa021915mg, part... 150 1e-33
ref|XP_004306191.1| PREDICTED: putative ribonuclease H protein A... 149 4e-33
gb|AAD24601.1| putative non-LTR retroelement reverse transcripta... 148 7e-33
gb|ABF97084.1| retrotransposon protein, putative, unclassified [... 146 3e-32
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 145 3e-32
ref|XP_004293049.1| PREDICTED: putative ribonuclease H protein A... 145 6e-32
ref|XP_007207799.1| hypothetical protein PRUPE_ppa024472mg, part... 144 8e-32
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A... 144 1e-31
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626... 144 1e-31
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ... 143 2e-31
gb|AAP54617.2| retrotransposon protein, putative, unclassified [... 143 2e-31
>ref|XP_007210987.1| hypothetical protein PRUPE_ppa021345mg [Prunus persica]
gi|462406722|gb|EMJ12186.1| hypothetical protein
PRUPE_ppa021345mg [Prunus persica]
Length = 759
Score = 174 bits (440), Expect = 1e-40
Identities = 125/442 (28%), Positives = 205/442 (46%), Gaps = 22/442 (4%)
Frame = +3
Query: 6 QGGLGFKDLRIFNRAMLAKLAWSLIHSPNELWVKILKCKYFKNCHPLHARKPSDSSWL*K 185
+GG+ F++L FN A+LAK W ++ P LWVK+LK +YF N L A++ +SW
Sbjct: 244 EGGMDFRNLHKFNLALLAKQCWRILMEPQSLWVKVLKGRYFPNVSFLEAKRSGRTSWAWA 303
Query: 186 GIEVGLEIIRGNSIWEVRNGSSIHAFTDN*IPEA--SLPICHTYPNPD--MLVADFIDPS 353
+ G +I+ + W+V NG+ I + D +P + P H+ D + V I+
Sbjct: 304 SLLEGRDILLRGAHWQVMNGAHIRLWIDRWLPNSLNDCPRLHSTETLDRNLRVEAIINRE 363
Query: 354 TRTWNVELINSFFTVENAQKICR-----TRVPLTGNDRLVLLHTKNGDFSVKTAYKALAG 518
WN++ I + +A+ I R +R+P DRL+ +NG +SV++ Y L
Sbjct: 364 LDEWNLDPIRHAISDSDARAITRVKFGSSRLP----DRLIWPMERNGSYSVRSGYHWLHN 419
Query: 519 EL*FIQNPHPSQP------TYKAIWSFPTLPKIQLFFWKCIENILTTNARLMQYR-TQTD 677
+NP PS +K IW PKI+ F W+ + N L T+A L + + ++
Sbjct: 420 TECRRRNPRPSSSMTIDPRLWKQIWKADVPPKIRNFLWRALRNCLATSANLHKKKIARSP 479
Query: 678 ACCLCDTNSIETAEHLLLFCPYAKSVWSNTSFGHYVTFEEEESSGIDIMNWFGNWLKSNN 857
C LC+ + ETAEH+LL CP+ + VW S + + S G W GN ++
Sbjct: 480 MCPLCNDHP-ETAEHILLLCPWVEPVWFRCSLNLRINRQAVTSFG----QWLGNVIEKGK 534
Query: 858 SVAIKH----AIFVTAWCIWKDRCFRIFQNKNVTPISTANSAMKLIADIDRSMPAVQTXX 1025
+ + I W IWKD+C + ++ + +P T ++A I + S+ +
Sbjct: 535 TPQERSRCLTVIAYFCWQIWKDKCKAVLEHISPSPARTTHAASIAINEFLGSLDHGRHQT 594
Query: 1026 XXXXXXXXXXXXXGLPDMCSI--LHCDASFDKDTNETGSGLVLNDMTGTFKGCKLIKGVA 1199
P ++ DAS++ ++ G G+++ + G F I VA
Sbjct: 595 EHPTLSNDNQQQLWNPPTSPFVKVNVDASWNPNSKRVGIGILIRNTHGDFIKGSSIPSVA 654
Query: 1200 RTAEEARCIAILEGIKWMEDKG 1265
+A EA A LEG K + G
Sbjct: 655 NSAIEAEAQACLEGCKLAAEMG 676
>ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 786
Score = 166 bits (420), Expect = 2e-38
Identities = 110/350 (31%), Positives = 171/350 (48%), Gaps = 25/350 (7%)
Frame = +3
Query: 6 QGGLGFKDLRIFNRAMLAKLAWSLIHSPNELWVKILKCKYFKNCHPLHARKPSDSSWL*K 185
+GGLGF+DL FN ++LAK W L+ PN LW +LK +YF NC L A K +SW
Sbjct: 289 EGGLGFRDLHQFNMSLLAKQCWRLVEEPNSLWASVLKARYFPNCGFLEATKGYRASWSWA 348
Query: 186 GIEVGLEIIRGNSIWEVRNGSSIHAFTDN*IP----------EASLPICHTYPNPDMLVA 335
+ +++ W+V NG SI + D+ IP + +LP P+ LV
Sbjct: 349 SLIEARDLVFQGCCWQVVNGKSIQIWHDSWIPPPSMGGGILIDGALP-----PSSPQLVD 403
Query: 336 DFIDPSTRTWNVELINSFFTVENAQKI-CRTRVPLTGNDRLVLLHTKNGDFSVKTAYKAL 512
ID T TW ++ + + + E +I C GNDRL+ +KNG F+VK+ Y L
Sbjct: 404 SLIDWDTHTWRLDGVANVLSREAEDRIRCIPIGEEDGNDRLLWPWSKNGSFTVKSGYHWL 463
Query: 513 AGEL*FIQNP--------HPSQPTYKAIWSFPTLPKIQLFFWKCIENILTTNARLMQYR- 665
+ +P + ++ +W PTLPK++LFFW+ + + + L + +
Sbjct: 464 HQQSSMNASPLVITGTSHRVGKKMWRLLWGMPTLPKVKLFFWQVMGGVGPNFSNLYKRKL 523
Query: 666 TQTDACCLCDTNSIETAEHLLLFCPYAKSVWSNTSFGHYVTFEEEESSGIDIMNWFGNWL 845
T + C LC ET EHLLL C + +W + G + ++++ + +D +WF N
Sbjct: 524 TSSPMCPLCGLED-ETFEHLLLLCSWVSPIWFGSPMG--LRIDKQQITMVD--SWFINSY 578
Query: 846 KSNNSVAIKHAIFVT-----AWCIWKDRCFRIFQNKNVTPISTANSAMKL 980
S K F+T W IWK RC +++ V+P ST + A+ L
Sbjct: 579 SSIVGTKQKE-FFLTMSSMICWMIWKARCNYLYKGIPVSPQSTLHLAINL 627
>ref|XP_007219602.1| hypothetical protein PRUPE_ppa023113mg, partial [Prunus persica]
gi|462416064|gb|EMJ20801.1| hypothetical protein
PRUPE_ppa023113mg, partial [Prunus persica]
Length = 851
Score = 164 bits (416), Expect = 7e-38
Identities = 106/338 (31%), Positives = 166/338 (49%), Gaps = 23/338 (6%)
Frame = +3
Query: 6 QGGLGFKDLRIFNRAMLAKLAWSLIHSPNELWVKILKCKYFKNCHPLHARKPSDSSWL*K 185
+GG+GF+DL+ FN ++LAK W ++ +P LW +ILK +YF C L A+K +SW
Sbjct: 409 EGGMGFRDLQAFNWSLLAKQCWRILRNPTTLWARILKARYFPECSFLDAKKGGRASWAWS 468
Query: 186 GIEVGLEIIRGNSIWEVRNGSSIHAFTDN*I------PEASLPICHTYPNPDMLVADFID 347
+ VG +II + W++ NG + + D + + LP C+ + +LVAD ID
Sbjct: 469 SLLVGRDIIEKGARWQIGNGHLVSVWKDRWLMGYGSEKISPLPSCNRF--TPLLVADLID 526
Query: 348 PSTRTWNVELINSFFTVENAQKICRTRV-PLTGNDRLVLLHTKNGDFSVKTAYKALAGEL 524
R+WN+ I F A I T + L DRLV KNGD++VK+ Y
Sbjct: 527 VGNRSWNISHIEPFIHPSEAMLIRSTPIGSLATRDRLVWPAVKNGDYTVKSGYYHAIN-- 584
Query: 525 *FIQNPHP----------SQPTYKAIWSFPTLPKIQLFFWKCIENILTTNARLMQYR-TQ 671
+ P P + +K IW PKI+ F W+ + N + T A L + +
Sbjct: 585 --VSPPDPCDRASSSHAVNSDVWKVIWRAHITPKIRNFMWRALTNSIPTCANLFGRKLAR 642
Query: 672 TDACCLCDTNSIETAEHLLLFCPYAKSVWSNTSFGHYVTFEEEESSGIDIMNWFGNWLKS 851
+ C LC ET EHLLL C + ++VW FG + + +S + +W +L+S
Sbjct: 643 SPTCRLCGLFP-ETVEHLLLLCSWTRAVWFGCPFG----YTPDLASITTLDSWLSGFLRS 697
Query: 852 NNSVAIKH----AIFV-TAWCIWKDRCFRIFQNKNVTP 950
+ + + ++F+ +W IWK RC IF + +P
Sbjct: 698 SFADGDQRDWGISLFMFCSWEIWKARCKAIFNDIRPSP 735
>ref|XP_007207581.1| hypothetical protein PRUPE_ppa018489mg, partial [Prunus persica]
gi|462403223|gb|EMJ08780.1| hypothetical protein
PRUPE_ppa018489mg, partial [Prunus persica]
Length = 1146
Score = 164 bits (415), Expect = 9e-38
Identities = 106/335 (31%), Positives = 163/335 (48%), Gaps = 21/335 (6%)
Frame = +3
Query: 9 GGLGFKDLRIFNRAMLAKLAWSLIHSPNELWVKILKCKYFKNCHPLHARKPSDSSWL*KG 188
GG+GF DL+ FNR++LAK W ++ +PN LW +ILK +YF C L A+K +SW
Sbjct: 722 GGMGFLDLQAFNRSLLAKQCWRIMRNPNALWARILKARYFPECSFLDAKKGGRASWALSS 781
Query: 189 IEVGLEIIRGNSIWEVRNGSSIHAFTDN*IPEASLPICHTYPNPD----MLVADFIDPST 356
+ VG +II + W++ NG S+ + D + P+ + +LVAD ID
Sbjct: 782 LLVGRDIIEKGAYWQIGNGRSVSVWKDRWLMGYGSGKISPLPSSNRFTPLLVADLIDVGN 841
Query: 357 RTWNVELINSFFTVENAQKICRTRV-PLTGNDRLVLLHTKNGDFSVKTAYKALAGEL*FI 533
R+WN+ I F A I T + L D LV KNGD++VK+ Y +
Sbjct: 842 RSWNISHIEPFIPPSEAMLIRSTPIGSLATRDPLVWPAVKNGDYTVKSGYYHAIN----V 897
Query: 534 QNPHP----------SQPTYKAIWSFPTLPKIQLFFWKCIENILTTNARLMQYR-TQTDA 680
P P + +K IW PKI+ F W+ + N + T A L + ++
Sbjct: 898 SPPDPCDRASSSHAVNSDVWKVIWRAHITPKIRNFMWRALTNSIPTCANLFGRKLARSPT 957
Query: 681 CCLCDTNSIETAEHLLLFCPYAKSVWSNTSFGHYVTFEEEESSGIDIMNWFGNWLKSNNS 860
C LC ET EHLLL C + ++VW FG + +S + +W ++L+S+ +
Sbjct: 958 CRLCGLFP-ETVEHLLLLCSWTRAVWFGCPFG----YAPNLASITTLDSWLSSFLRSSFA 1012
Query: 861 VAIKH----AIFV-TAWCIWKDRCFRIFQNKNVTP 950
+ ++F+ +W IWK RC IF + +P
Sbjct: 1013 DGDQRDWGISLFMFCSWEIWKARCKAIFNDIRPSP 1047
>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
Length = 2303
Score = 164 bits (414), Expect = 1e-37
Identities = 130/494 (26%), Positives = 219/494 (44%), Gaps = 11/494 (2%)
Frame = +3
Query: 6 QGGLGFKDLRIFNRAMLAKLAWSLIHSPNELWVKILKCKYFKNCHPLHARKPSDSSWL*K 185
+GGLGF+D FN+AM+AK W LI PN L K+L+ +YFK+C L A+ S+ S++ +
Sbjct: 827 RGGLGFRDFISFNQAMVAKQGWRLIQFPNSLVSKVLRARYFKSCSFLDAKPGSNPSFIWR 886
Query: 186 GIEVGLEIIRGNSIWEVRNGSSIHAFTDN*I--PEASLPICHTYPNPDMLVADFIDPSTR 359
I G ++I+ + W + NGS+I + DN I P+ PI D V + +D
Sbjct: 887 SILWGRQVIQKGARWRIGNGSNILVYKDNWIPRPDTFKPISPPTLPIDTTVGELMD-DEN 945
Query: 360 TWNVELINSFFTVENAQKICRTRVPLTGN-DRLVLLHTKNGDFSVKTAYKALAGEL*FIQ 536
WNV +N F E+ + I + +P + D ++ + K+G++SVK+ Y+ +A +L
Sbjct: 946 NWNVAKLNQHFMQEDTEAILKIPLPRSQKVDEMMWHYDKHGEYSVKSGYQ-IALKLKAPD 1004
Query: 537 NPHPS---QPTYKAIWSFPTLPKIQLFFWKCIENILTTNARLMQYRTQTDACCLCDTNSI 707
P S +KA+WS K+++F W+ N+L T L + + D C +
Sbjct: 1005 EPSNSGSNSKRWKAVWSMELPEKMKIFMWRAARNLLPTAENLWKRKCLKDPICQGCNREV 1064
Query: 708 ETAEHLLLFCPYAKSVWSNTSFGHYVTFEEEESSGIDIMNWFGNWLKSNNSVAIKHAIFV 887
ET H LL C A+ +W + + ++ + + I + W K+ I
Sbjct: 1065 ETVRHALLDCKAARKIWYHATSSVQISNAQNQDILEFIYEVWSTWGKTKAEQTI-----A 1119
Query: 888 TAWCIWKDRCFRIFQNKNVTPISTANSAMKLIADIDRSMPAVQTXXXXXXXXXXXXXXXG 1067
W IW R RIF+ K P ++A A L+ R+
Sbjct: 1120 FCWAIWFARNKRIFEGKKSDPRASAAKAESLLEAYHRARKP-DASHIHNVKRIVQKKWEP 1178
Query: 1068 LPDMCSILHCDASFDKDTNETGSGLVLNDMTGTF-----KGCKLIKGVARTAEEARCIAI 1232
P ++ DA+ + G G V+ D +G K L +GV+ E A+
Sbjct: 1179 PPGNFLKVNVDAAINNRDQVAGLGAVIKDPSGKIVAAGTKQVPLREGVSFAEAE----AM 1234
Query: 1233 LEGIKWMEDKGISSFCIRSDAKNAIT*LINNNNQLCWFSKTILDDCQFLLNNFSFSRLDY 1412
G++ + +S+ + +D K + L+NN ++ D Q +F + +
Sbjct: 1235 EWGLQIARELSLSALIMETDCKEVVD-LLNNTKGSRTGISWVISDIQEQRRDFKEVKFRH 1293
Query: 1413 VNRKFISSADKAAK 1454
+ R + A AK
Sbjct: 1294 IPRTCNTCAHSLAK 1307
>ref|XP_004292563.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 504
Score = 162 bits (411), Expect = 3e-37
Identities = 127/504 (25%), Positives = 220/504 (43%), Gaps = 18/504 (3%)
Frame = +3
Query: 9 GGLGFKDLRIFNRAMLAKLAWSLIHSPNELWVKILKCKYFKNCHPLHARKPSDSSWL*KG 188
GG+GF+D+ FN A+LAK W LI +PN LW K LK +YF C + A+K +SW
Sbjct: 8 GGMGFRDIHHFNLALLAKQCWRLIQNPNSLWAKCLKGQYFPKCSFMEAKKGYRASWGWSN 67
Query: 189 IEVGLEIIRGNS-IWEVRNGSSIHAFTDN*IPEASLP----ICHTYPNPDMLVADFIDPS 353
+ + G W+V NG+ I+ + D +P + I N V FID
Sbjct: 68 LIEARDFFMGEGCFWQVSNGNDINIWKDKWLPPPNAAKVRVIGDISANDPSSVGSFIDWD 127
Query: 354 TRTWNVELINSFFTVENAQKICRTRVPLTGN---DRLVLLHTKNGDFSVKTAYKALAGEL 524
R WN I+ ++ Q+I +P+ D + K G ++V++ Y +
Sbjct: 128 LRGWNTTAIDHVIHPQDIQRI--VDIPIGDGEVLDCFLWPWNKIGVYTVRSGYHWYHTSM 185
Query: 525 *FIQNP-----HPSQP-TYKAIWSFPTLPKIQLFFWKCIENILTTNARLMQYRTQTDACC 686
+ P H P +K +WS TLPK+++F W+ + T L + + ++ C
Sbjct: 186 SIPRAPSIGSSHQFDPKIWKILWSIKTLPKVRIFLWRVLHGAAPTMHSLHKRKIVSNPLC 245
Query: 687 LCDTNSIETAEHLLLFCPYAKSVWSNTSFGHYVTFEEEESSGIDIMNW---FGNWLKSNN 857
+ ET EHLLL C + +W + G + ++ + + D W N S+
Sbjct: 246 PVCGKTEETFEHLLLLCHWVNPIWFGSPLG--IRIDKRKITTFD--RWLISIYNHCPSSE 301
Query: 858 SVAIKHAIFVTAWCIWKDRCFRIFQNKNVTPISTANSAMKLIADIDRSMPAVQTXXXXXX 1037
A+ I W IWK+RC ++Q++ V+P T +A L + + +++
Sbjct: 302 REAVLTLISTICWAIWKERCHFVYQHREVSPPFTIRAARNLALEFRHASASMRNSRVPRL 361
Query: 1038 XXXXXXXXXGLPDMCSILHCDASFDKDTNETGSGLVLNDMTGT-FKGCKLIKGVARTAEE 1214
G ++ DAS+ + TG G+V+ D G L+K + +
Sbjct: 362 HMQWLPPPFGHHK----INSDASW-FPPDHTGVGIVIRDSNRVMIAGSSLLKKCG-SVTD 415
Query: 1215 ARCIAILEGIKWMEDKGISSFCIRSDAKNAIT*LINNNNQLCWFSKTILDDCQFLLNNFS 1394
A+ +A+L G + + + + SD + IT + N+N++ W + I+ + + F+
Sbjct: 416 AKAVALLVGSELVASLQLQNIIFESDLEEVITEINKNHNKVNWRTHLIIQQIRRSCSMFN 475
Query: 1395 FSRLDYVNRKFISSADKAAKYCKR 1466
++ R+ A AA R
Sbjct: 476 SCSWVWIPREANRVAHVAASLAFR 499
>ref|XP_007199601.1| hypothetical protein PRUPE_ppa023095mg, partial [Prunus persica]
gi|462395001|gb|EMJ00800.1| hypothetical protein
PRUPE_ppa023095mg, partial [Prunus persica]
Length = 933
Score = 160 bits (405), Expect = 1e-36
Identities = 140/497 (28%), Positives = 208/497 (41%), Gaps = 15/497 (3%)
Frame = +3
Query: 6 QGGLGFKDLRIFNRAMLAKLAWSLIHSPNELWVKILKCKYFKNCHPLHARKPSDSSWL*K 185
+GG+GF++L FN A+LAK W ++ P LWVK+LK +YF N L A+K +SW
Sbjct: 432 EGGMGFRNLHKFNLALLAKQCWRILIEPQSLWVKVLKGRYFPNVSFLEAKKSGRTSWAWA 491
Query: 186 GIEVGLEIIRGNSIWEVRNGSSIHAFTDN*IPEASLPICHTYPNPDMLVADFIDPSTRTW 365
+ G +I+ + W+V NG+ I + D +P SL I + +L+ T W
Sbjct: 492 SLLEGRDILLRGAHWQVMNGAHIRLWVDRWLPN-SLMIVLAFLLLKLLI------GTYEW 544
Query: 366 NVELINSFFTVENAQK------ICRTRVPLTGNDRLVLLHTKNGDFSVKTAYKALAGEL* 527
+ L S Q +R+P DRL+ +NG +SV++ Y L
Sbjct: 545 KLLLTGSSMNGTWTQLGTPFLIFGSSRLP----DRLIWPMERNGSYSVRSGYHWLHNTEC 600
Query: 528 FIQNPHPS------QPTYKAIWSFPTLPKIQLFFWKCIENILTTNARLMQYR-TQTDACC 686
+NP PS Q +K IW PKIQ F W+ + N L T+A L + + ++ C
Sbjct: 601 RRRNPRPSSSMAIDQRLWKQIWKADVPPKIQNFLWRALRNCLATSANLHKKKIARSPMCP 660
Query: 687 LCDTNSIETAEHLLLFCPYAKSVWSNTSFGHYVTFEEEESSGIDIMNWFGNWLKSNNSVA 866
LC+ + +TAEH+LL CP+ + VW S + + S G + N W +
Sbjct: 661 LCNDHP-KTAEHILLLCPWVEPVWFGCSLNLRINRQAVTSFGQWLGNVIEKWKTPQERLR 719
Query: 867 IKHAIFVTAWCIWKDRCFRIFQNKNVTPISTANSAMKLIADIDRSMP--AVQTXXXXXXX 1040
W IW DRC + ++ +P T ++A I + S+ QT
Sbjct: 720 CLTVTAYFCWQIWNDRCKAVLEHIFPSPARTTHAASIAINEFLGSLDHGRHQTEHPTLSN 779
Query: 1041 XXXXXXXXGLPDMCSILHCDASFDKDTNETGSGLVLNDMTGTFKGCKLIKGVARTAEEAR 1220
LP K TN G + KG I VA +A EA
Sbjct: 780 DNQQQLWNPLP---------LPLSKSTNTHGDFI---------KGSS-IPSVANSAIEAE 820
Query: 1221 CIAILEGIKWMEDKGISSFCIRSDAKNAIT*LINNNNQLCWFSKTILDDCQFLLNNFSFS 1400
A LEG K + G S+ K I+ L + W IL + +LN F
Sbjct: 821 AQACLEGCKLAAEMGYRQVTFESNCKEVISPLKGPLSNGRWEIYPILSTVRDVLNCFQTY 880
Query: 1401 RLDYVNRKFISSADKAA 1451
++ R +AD A
Sbjct: 881 VWTWILRTANQAADHLA 897
>ref|XP_004292479.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 473
Score = 159 bits (402), Expect = 3e-36
Identities = 115/414 (27%), Positives = 190/414 (45%), Gaps = 23/414 (5%)
Frame = +3
Query: 6 QGGLGFKDLRIFNRAMLAKLAWSLIHSPNELWVKILKCKYFKNCHPLHARKPSDSSWL*K 185
+GGLGFKD +N A+LAK W ++ P LWVK+LK +YF C LHA K +SW
Sbjct: 54 EGGLGFKDKHHYNVALLAKQCWRILSQPESLWVKVLKARYFPECDFLHANKGYRASWGWS 113
Query: 186 GIEVGLEIIRGNSIWEVRNGSSIHAFTDN*I-PEASLPICHTYP---NPDMLVADFIDPS 353
I ++I S W++ NG + +T+N + P PI T N LV + ID
Sbjct: 114 SILQARDLIMEGSGWQIANGLKANIWTENWLHPPDVCPIQTTAQISNNDPQLVFEIIDWP 173
Query: 354 TRTWNVELINSFFTVENAQKICRTRVPL---TGNDRLVLLHTKNGDFSVKTAYKALAGEL 524
++TWN++ I A KI +P+ G DR++ K G ++V + Y + +
Sbjct: 174 SKTWNLDSILHLIQPSEANKI--LLIPIGSHDGEDRIIWPWNKRGVYTVSSRYTWINSKC 231
Query: 525 *FIQNPHPSQ------PTYKAIWSFPTLPKIQLFF--WKCIENILTTNARL-MQYRTQTD 677
I P S ++ +W PK+ FF WK I + T + ++ T
Sbjct: 232 RVINPPKCSSSHSVETAVWRQLWKIRAPPKVNFFFFLWKAISGAIATFKNMFIRKLASTP 291
Query: 678 ACCLCDTNSIETAEHLLLFCPYAKSVWSNTSFGHYVTFEEEESSGIDIMNWFGNWLKSNN 857
C +C E+ EH+LL CP+A++VW +S G + + S +D +W K++N
Sbjct: 292 LCPICGAYE-ESNEHMLLLCPWAEAVWFGSSLG--LKINKNHISTLD--SWLKEICKAHN 346
Query: 858 S---VAIKHAIFVTAWCIWKDRCFRIFQNKNVTPISTANSAMKLIADI----DRSMPAVQ 1016
S + + + W IWK RC ++ + ++P + S++ L + + P+++
Sbjct: 347 SQDRIWVLTMVGCICWSIWKSRCSFVYDRRPISPPAVIQSSLNLALEFWSANRKDPPSLE 406
Query: 1017 TXXXXXXXXXXXXXXXGLPDMCSILHCDASFDKDTNETGSGLVLNDMTGTFKGC 1178
+ + D+C CDAS+ ++ G G+V+ G C
Sbjct: 407 S--EARSRKRWQPPPLDVVDVC----CDASW-IESGSCGMGVVIRSNFGELVDC 453
>ref|XP_007036869.1| Ribonuclease H-like superfamily protein [Theobroma cacao]
gi|508774114|gb|EOY21370.1| Ribonuclease H-like
superfamily protein [Theobroma cacao]
Length = 569
Score = 150 bits (379), Expect = 1e-33
Identities = 120/506 (23%), Positives = 208/506 (41%), Gaps = 22/506 (4%)
Frame = +3
Query: 15 LGFKDLRIFNRAMLAKLAWSLIHSPNELWVKILKCKYFKNCHPLHARKPSDSSWL*KGIE 194
LGF+D R FN A+LAK W L L KILK +YF H + A S+ S+L + I+
Sbjct: 54 LGFRDTRCFNLALLAKQGWRLQMQQPTLAYKILKARYFPRVHFMDAPVGSNPSYLWRSIK 113
Query: 195 VGLEIIRGNSIWEVRNGSSIHAFTDN*IPEASLPICHTYP---NPDMLVADFIDPSTRTW 365
+II+ +W V NG+ I D+ IP + + Y + M+V++ ID W
Sbjct: 114 ESQQIIKKGLVWRVGNGNDIQVLEDSWIPYETPRVAMAYEENVSNSMMVSELIDARCGKW 173
Query: 366 NVELINSFFTVENAQKICRTRVPLT---GNDRLVLLHTKNGDFSVKTAYKALAGEL*FIQ 536
+ + F + + I +PL+ DR V + +K+G ++VK Y+ ++ +
Sbjct: 174 DEAKVKLCFPLYESNLI--LSIPLSVRLSVDRQVRVVSKHGQYTVKFGYRLISS---LLD 228
Query: 537 NPHPSQPT------YKAIWSFPTLPKIQLFFWKCIENILTTNARLMQYRTQTDACCLCDT 698
+ P + +K +W KI F WK ++ L T L + D C+
Sbjct: 229 DSEPGCSSDSFDGFWKEVWKLSIPRKIIFFMWKALKGALPTKKALSHRKINVDNICVFCQ 288
Query: 699 NSIETAEHLLLFCPYAKSVWSNTSFGHYVTFEEEESSGIDIMNWFGNWLKSNNSVAIKHA 878
ET H+L +C +A++ W ++ +G F + + + +W + N
Sbjct: 289 EDEETDFHILCYCQFARATWLSSKWG----FRDTGAHSTSVFDWIFQ-VSCNLGPKDVGE 343
Query: 879 IFVTAWCIWKDRCFRIFQNKNVTPISTANSAMKLIADIDRSMPAVQTXXXXXXXXXXXXX 1058
I W IWK R RIF N+ + P+ + + +M T
Sbjct: 344 IACILWAIWKARNLRIFGNQIMNPVQVLKLGLDMNNQYHMAMEVSATENRVLERENRGFR 403
Query: 1059 XXGLPDMCSILHCDASFDK--DTNETGSGLVLNDMTGTFKGCKLIKGVARTAEEARCIAI 1232
GL LH DA+ D+ T G+G ++ + G F + + A
Sbjct: 404 SRGL-----TLHSDAAMDQVDGTTRVGAGFIIRRLNGGF--------FCAVGRKIQYCAS 450
Query: 1233 LEGIKWMEDKGISSFCIRSDAKNAIT*LINNNNQLCWFSKT--------ILDDCQFLLNN 1388
+E ++ S+C++ A ++N W K +++DC L+
Sbjct: 451 VEEVELRALVWALSYCVKEQIMLADV-FLDNQVVTGWIKKQQFTGALEHLIEDCTILMER 509
Query: 1389 FSFSRLDYVNRKFISSADKAAKYCKR 1466
+ +D+ +R+ +A A+ KR
Sbjct: 510 INCQAIDFCSRETNRTAHSIAQIAKR 535
>ref|XP_007219414.1| hypothetical protein PRUPE_ppa021915mg, partial [Prunus persica]
gi|462415876|gb|EMJ20613.1| hypothetical protein
PRUPE_ppa021915mg, partial [Prunus persica]
Length = 509
Score = 150 bits (379), Expect = 1e-33
Identities = 103/431 (23%), Positives = 193/431 (44%), Gaps = 12/431 (2%)
Frame = +3
Query: 9 GGLGFKDLRIFNRAMLAKLAWSLIHSPNELWVKILKCKYFKNCHPLHARKPSDSSWL*KG 188
GGLGF+DL FN A+L K W LI++P+ LW + LK +YF + +A +SW
Sbjct: 54 GGLGFRDLLYFNLALLGKQCWRLINNPDSLWARFLKARYFPDSDFWNAEVGHRASWAWAS 113
Query: 189 IEVGLEIIRGNSIWEVRNGSSIHAFTDN*IP----EASLPICHTYPNPDMLVADFIDPST 356
+ + + ++ ++ NG+ + + D + + +P N + + + ++
Sbjct: 114 LIEERDTVLRHARKQIFNGAETNIWVDRWLKLPHNDVIVPTRPLSANTPIFLEEIMNKLE 173
Query: 357 RTWNVELINSFFTVENAQKICRTRVPLTG-NDRLVLLHTKNGDFSVKTAYKALAGEL*FI 533
R+W++ ++ F E + I + ++ DR + T NG++SVK+
Sbjct: 174 RSWDLSRVSLFLDQETIRCILSLPIGISSLPDRWIWPWTSNGEYSVKSGIVGPP------ 227
Query: 534 QNPHP-SQPTYKAIWSFPTLPKIQLFFWKCIENILTTNARLMQYR-TQTDACCLCDTNSI 707
Q H S +K +W +LPKI+ F W+ + N + T L + + +Q+ C +C+ N
Sbjct: 228 QTSHVVSTQVWKGLWKLKSLPKIKFFCWRILSNAIATKLNLFKRKISQSPMCPVCENNE- 286
Query: 708 ETAEHLLLFCPYAKSVWSNTSFGHYVTFEEEESSGIDIMNWFGNWLKSNNSVAIKHAIFV 887
E+ EHL L CP+ +VW FG + + S NW + + N + + +
Sbjct: 287 ESVEHLFLLCPWTAAVW----FGSPLNYRVHNQSITTFDNWLNSMFQLNLTSILDRNRLM 342
Query: 888 T-----AWCIWKDRCFRIFQNKNVTPISTANSAMKLIADIDRSMPAVQTXXXXXXXXXXX 1052
T W IWK RC + + + + PI + AM+ + + + T
Sbjct: 343 TIISFILWEIWKARCKFVIEGRQLHPIHVLHQAMRAANEFIEANVSQSTHSDYVTLISTR 402
Query: 1053 XXXXGLPDMCSILHCDASFDKDTNETGSGLVLNDMTGTFKGCKLIKGVARTAEEARCIAI 1232
+ + DA++ K++N + G+V+ D G +G K KG ++ E +
Sbjct: 403 AWTPPSDGFVKV-NTDAAWIKESNRSAVGVVIRDSAGNVRGAKR-KGFSKVMLETDSTIL 460
Query: 1233 LEGIKWMEDKG 1265
+ ++ M + G
Sbjct: 461 KQSVEGMTNNG 471
>ref|XP_004306191.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 755
Score = 149 bits (375), Expect = 4e-33
Identities = 86/268 (32%), Positives = 134/268 (50%), Gaps = 9/268 (3%)
Frame = +3
Query: 9 GGLGFKDLRIFNRAMLAKLAWSLIHSPNELWVKILKCKYFKNCHPLHARKPSDSSWL*KG 188
GGLGF+ L FN A+LAK AW LIHSP LWV++L+ +YF N A K SW+
Sbjct: 322 GGLGFRSLESFNLALLAKQAWRLIHSPTALWVQVLQARYFSNTSFRKAHKGGTPSWIWSS 381
Query: 189 IEVGLEIIRGNSIWEVRNGSSIHAFTDN*IPEASLPICHTY-PNPDMLVADFIDPSTRTW 365
+ G ++ + W + NG + D +P+AS + Y P ++V I +W
Sbjct: 382 LLEGRNLLFQGTSWRIGNGCLTDMWNDKWLPQASYSLASHYGQQPPLMVNQLITLDPPSW 441
Query: 366 NVELINSFFTVENAQKICRTRVPLTGN-DRLVLLHTKNGDFSVKTAYKALAGEL*FIQNP 542
N+ + +V + I + TGN D+L+ H ++G ++V++ Y + I
Sbjct: 442 NLTSVAHILSVSDQAAIQVIPLVDTGNEDKLIWPHQQSGSYTVRSGYHLAQATMTSIPKL 501
Query: 543 HPS------QPTYKAIWSFPTLPKIQLFFWKCIENILTTNARL-MQYRTQTDACCLCDTN 701
S +K IW+ TLPKI++F WK + N + T L ++ +Q+ C +C+
Sbjct: 502 KASSSHSVTSAVWKWIWNLQTLPKIKIFIWKAVSNFVATKGNLHFRHISQSSLCPICNAF 561
Query: 702 SIETAEHLLLFCPYAKSVWSNTSFGHYV 785
ET EH+L CP+ VW FG +V
Sbjct: 562 P-ETIEHVLFTCPWVVCVWFAHPFGIHV 588
>gb|AAD24601.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1319
Score = 148 bits (373), Expect = 7e-33
Identities = 100/325 (30%), Positives = 160/325 (49%), Gaps = 12/325 (3%)
Frame = +3
Query: 9 GGLGFKDLRIFNRAMLAKLAWSLIHSPNELWVKILKCKYFKNCHPLHARKPSDSSWL*KG 188
GG GFKDL+ FN+A+LAK AW L + +I K +YF N L+AR+ + S+ +
Sbjct: 803 GGFGFKDLQCFNQALLAKQAWRLFSDSKSIVSQIFKSRYFMNTDFLNARQGTRPSYTWRS 862
Query: 189 IEVGLEIIRGNSIWEVRNGSSIHAFTDN*IPE--ASLPI-CHTYPNPDMLVADFIDPSTR 359
I G E++ G + NG + + D + + + P+ H+ N M V+ IDP TR
Sbjct: 863 ILYGRELLNGGLKRLIGNGEQTNVWIDKWLFDGHSRRPMNLHSLMNIHMKVSHLIDPLTR 922
Query: 360 TWNVELINSFFTVENAQKICRTRVPLTGNDRLVLLHTKNGDFSVKTAYKALAGE----L* 527
WN++ + F ++ Q I R ++ D T NG ++VK+ Y+ + E L
Sbjct: 923 NWNLKKLTELFHEKDVQLIMHQRPLISSEDSYCWAGTNNGLYTVKSGYERSSRETFKNLF 982
Query: 528 FIQNPHPS-QPTYKAIWSFPTLPKIQLFFWKCIENILTTNARLMQYRTQTDACCLCDTNS 704
+ +PS P + +WS T+PKI++F WK ++ L RL +T CL
Sbjct: 983 KEADVYPSVNPLFDKVWSLETVPKIKVFMWKALKGALAVEDRLRSRGIRTADGCLFCKEE 1042
Query: 705 IETAEHLLLFCPYAKSVWSNTSFGHYVTFEEEESSGIDIMNWFGNWLKSNNSVAI-KHAI 881
IET HLL CP+A+ VW+ + T G I + + ++++ + I +H
Sbjct: 1043 IETINHLLFQCPFARQVWALSLIQAPAT-----GFGTSIFSNINHVIQNSQNFGIPRHMR 1097
Query: 882 FVTAWC---IWKDRCFRIFQNKNVT 947
V+ W IWK+R +FQ +T
Sbjct: 1098 TVSPWLLWEIWKNRNKTLFQGTGLT 1122
>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1184
Score = 146 bits (368), Expect = 3e-32
Identities = 104/398 (26%), Positives = 183/398 (45%), Gaps = 12/398 (3%)
Frame = +3
Query: 6 QGGLGFKDLRIFNRAMLAKLAWSLIHSPNELWVKILKCKYFKNCHPLHARKPSDSSWL*K 185
+GGLGF+DL FNRAMLAK W + P+ L ++++CKY+ + + L AR SS+ +
Sbjct: 668 RGGLGFRDLYCFNRAMLAKQIWRFLCDPDSLCARVMRCKYYPDGNILRARPKKGSSYAWQ 727
Query: 186 GIEVGLEIIRGNSIWEVRNGSSIHAFTDN*IPEASLPICHTYPNPDML--VADFIDPSTR 359
I G E +G IW + +GS ++ + D+ IP +S T +++ V + I+P +
Sbjct: 728 SILSGSECFKG-YIWRIGDGSQVNIWEDSLIPSSSNGKVLTPRGRNIITKVEELINPVSG 786
Query: 360 TWNVELINSFFTVENAQKICRTRVPLTGNDRLVLLHTKNGDFSVKTAY----KALAGEL* 527
W+ +LI++ F +A +I + + D + HT++G FSV++AY A G
Sbjct: 787 GWDEDLIDTLFWPIDANRILQIPISAGREDFVAWHHTRSGIFSVRSAYHCQWNAKFGSKE 846
Query: 528 FIQN--PHPSQPTYKAIWSFPTLPKIQLFFWKCIENILTTNARLMQYRTQTDACCLCDTN 701
+ + S+P + +W PKI++F W+ + ++ L C ++
Sbjct: 847 RLPDGASSSSRPVWDNLWKLEIPPKIKIFAWRMLHGVIPCKGILADKHIAVQGGCPVCSS 906
Query: 702 SIETAEHLLLFCPYAKSVWSNTSFGHYVT----FEEEESSGIDIMNWFGNWLKSNNSVAI 869
+E +H++ C AK +W + F+ S ++ M G + N++ +
Sbjct: 907 GVEDIKHMVFTCRRAKLIWKQLGIWSRIQPILGFDRSGSVLVEEMIRKGGKVSHLNAIGM 966
Query: 870 KHAIFVTAWCIWKDRCFRIFQNKNVTPISTANSAMKLIADIDRSMPAVQTXXXXXXXXXX 1049
I AW IW +R + + P +A S L + S +T
Sbjct: 967 TELILTGAWYIWWERRQLVQGERIQNPARSAMSIATLTTNYMLSNKKGKTKIQNGWKKP- 1025
Query: 1050 XXXXXGLPDMCSILHCDASFDKDTNETGSGLVLNDMTG 1163
P+ +++ DA+FD D+ G G+VL D G
Sbjct: 1026 -------PEGMLMINVDAAFDFDSGSGGIGVVLRDHLG 1056
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 145 bits (367), Expect = 3e-32
Identities = 99/332 (29%), Positives = 162/332 (48%), Gaps = 21/332 (6%)
Frame = +3
Query: 6 QGGLGFKDLRIFNRAMLAKLAWSLIHSPNELWVKILKCKYFKNCHPLHARKPSDSSWL*K 185
QGG GFKDL+ FN+A+LAK AW ++ L+ ++ + +YF N L A + S S+ +
Sbjct: 849 QGGFGFKDLQCFNQALLAKQAWRVLQEKGSLFSRVFQSRYFSNSDFLSATRGSRPSYAWR 908
Query: 186 GIEVGLEIIRGNSIWEVRNGSSIHAFTDN*IPEAS--LPI-CHTYPNPDMLVADFIDPST 356
I G E++ + NG +TD + + S P+ + N D+ V+ IDP++
Sbjct: 909 SILFGRELLMQGLRTVIGNGQKTFVWTDKWLHDGSNRRPLNRRRFINVDLKVSQLIDPTS 968
Query: 357 RTWNVELINSFFTVENAQKICRTRVPLTGNDRLVLLHTKNGDFSVKTAYKALAGEL*F-I 533
R WN+ ++ F ++ + I + R D LH+ NG +SVKT Y+ L+ ++ +
Sbjct: 969 RNWNLNMLRDLFPWKDVEIILKQRPLFFKEDSFCWLHSHNGLYSVKTGYEFLSKQVHHRL 1028
Query: 534 QNPHPSQPT----YKAIWSFPTLPKIQLFFWKCIENILTTNARLMQYRTQT-DACCLCDT 698
+P+ + IW+ T PKI++F WK + + RL ++ D C +CDT
Sbjct: 1029 YQEAKVKPSVNSLFDKIWNLHTAPKIRIFLWKALHGAIPVEDRLRTRGIRSDDGCLMCDT 1088
Query: 699 NSIETAEHLLLFCPYAKSVWSNTSFGHYVTFEEEESSGIDIMNWFGNWLKSNNSVAI--- 869
+ ET H+L CP A+ VW+ T S+G + F N + +N S I
Sbjct: 1089 EN-ETINHILFECPLARQVWAITHL---------SSAGSE----FSNSVYTNMSRLIDLT 1134
Query: 870 ------KHAIFVTAWC---IWKDRCFRIFQNK 938
H FV+ W +WK+R +F+ K
Sbjct: 1135 QQNDLPHHLRFVSPWILWFLWKNRNALLFEGK 1166
>ref|XP_004293049.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 677
Score = 145 bits (365), Expect = 6e-32
Identities = 113/447 (25%), Positives = 186/447 (41%), Gaps = 19/447 (4%)
Frame = +3
Query: 9 GGLGFKDLRIFNRAMLAKLAWSLIHSPNELWVKILKCKYFKNCHPLHARKPSDSSWL*KG 188
GG+GFKDL +FN+A L K W LI +PN LW ++LK +YF+N + +HA+K S SW+
Sbjct: 227 GGIGFKDLAVFNKAFLGKQCWRLIKNPNSLWCRVLKGRYFENSNFVHAKKGSRPSWVWNS 286
Query: 189 IEVGLEIIRGNSIWEVRNGSSIHAFTDN*IPE----ASLPICHTYPNPDMLVADFIDPST 356
+ G + I N+ W+VRN SI + D +P + +PI + +LVA+ ID
Sbjct: 287 LLAGQDTITSNAFWQVRNRQSIEVWKDRWVPNSIGGSIIPIDTSNRFTPLLVAEVID-EN 345
Query: 357 RTWNVELINSFFTVENAQKICRTRVPL---TGNDRLVLLHTKNGDFSVKTA-YKALAGEL 524
R W ++ + F + I +P+ + D LV H+K+ ++SV++ YK L+ +
Sbjct: 346 REWQIDHLKPFLRDSDFNSI--KAIPIGAASERDVLVWPHSKSENYSVRSGYYKTLSAWV 403
Query: 525 ----*FIQNPHPSQP-TYKAIWSFPTLPKIQLFFWKCIENILTTNARLMQYRTQTDACCL 689
H P +K W PK+ F WK + N L T L + C
Sbjct: 404 PKASIKASTSHKVDPHVWKIAWGSKLAPKVSNFTWKALANALPTCENLHKRNIGNSPLCK 463
Query: 690 CDTNSIETAEHLLLFCPYAKSVWSNTSFGHYVTFEEEESSGIDIMNWF------GNWLKS 851
ET EH LL C + + VW FG + + S + W G +L
Sbjct: 464 ICGLFPETIEHCLLLCEWTELVW----FGSLAGYSLNKQSITTLEKWLLETDKKGAFLAD 519
Query: 852 NNSVAIKHAIFVTAWCIWKDRCFRIFQNKNVTPISTANSAMKLIADIDRSMPAVQTXXXX 1031
+ ++ I W IWK R + + P + + +
Sbjct: 520 DKQFCLQ-LILWHLWEIWKHRYEIVMSHGKPNPKVVIEKIKHNFGEWGAAQVSNLKSLNM 578
Query: 1032 XXXXXXXXXXXGLPDMCSILHCDASFDKDTNETGSGLVLNDMTGTFKGCKLIKGVARTAE 1211
P+ ++ D ++D T +G G+V+ + G + G +
Sbjct: 579 TSSQSASNDWCPPPNHVVKVNMDGAWDDQTKISGIGIVIRNHRGACLAGASLYGKYNSTI 638
Query: 1212 EARCIAILEGIKWMEDKGISSFCIRSD 1292
E A++ G++ + S + D
Sbjct: 639 EMEAEAVVRGLQLAKRLRFQSIVVEGD 665
>ref|XP_007207799.1| hypothetical protein PRUPE_ppa024472mg, partial [Prunus persica]
gi|462403441|gb|EMJ08998.1| hypothetical protein
PRUPE_ppa024472mg, partial [Prunus persica]
Length = 920
Score = 144 bits (364), Expect = 8e-32
Identities = 123/481 (25%), Positives = 198/481 (41%), Gaps = 19/481 (3%)
Frame = +3
Query: 9 GGLGFKDLRIFNRAMLAKLAWSLIHSPNELWVKILKCKYFKNCHPLHARKPSDSSWL*KG 188
GGLGF+DL FN A+L K AW LIH PN W K++K +
Sbjct: 432 GGLGFRDLNTFNLALLGKQAWRLIHEPNSYWAKLIKASLLE------------------- 472
Query: 189 IEVGLEIIRGNSIWEVRNGSSIHAFTDN*I--PEAS--LPICHTYPNPDMLVADFIDPST 356
G E+I+ N +V NG + + D + P +P+ N LV++ +D T
Sbjct: 473 ---GREVIKENIRHQVFNGHNTKIWEDRWLLPPHQGYVVPLITVPLNAPQLVSEILDGQT 529
Query: 357 RTWNVELINSFFTVENAQKICRTRVPLTGN----DRLVLLHTKNGDFSVKTAYKALAGEL 524
RTWN + + + + + + I VP+ GN DR+V K+G +SVK+ Y
Sbjct: 530 RTWNTQALAQYVSQDTIKLI--NEVPI-GNLHREDRIVWPWNKSGLYSVKSGYNLQVVSA 586
Query: 525 *FIQNPHPS-----QPTYKAIWSFPTLPKIQLFFWKCIENILTTNARLMQYRTQTDACCL 689
+I + S + +K IW+ PTLPK++ F W+ + L T L + R + C
Sbjct: 587 SYIGGYNRSSHVIERGVWKDIWASPTLPKVKFFLWRMMVRALPTKLNLYRRRIISSPFCP 646
Query: 690 CDTNSIETAEHLLLFCPYAKSVWSNTSFGHYVTFEEEESSGIDIMNWFGNWLKS-----N 854
E+ EH + CP+ ++VW FG + + S WF L S +
Sbjct: 647 ICNQYEESEEHAIFLCPWTQAVW----FGSPLNYRVNPQSITTFDRWFTGLLNSQMFSKS 702
Query: 855 NSVAIKHAIFVTAWCIWKDRCFRIFQNKNVTPISTANSAMKLIADID-RSMPAVQTXXXX 1031
V + + +W IWK RC +F++ + P A + D + T
Sbjct: 703 ERVWVLSLVSFISWEIWKARCKFLFEDITIDPRCVVERAASAAEEFDVLRRHEISTRNGA 762
Query: 1032 XXXXXXXXXXXGLPDMCSILHCDASFDKDTNETGSGLVLNDMTGTFKGCKLIKGVARTAE 1211
+ ++ DA++ +E G G+V+ + F K +A
Sbjct: 763 GVFSQPTDIWKPPVNGAIKINFDAAW--KNHEAGLGVVMRNHNKDFCYGFASKRCCNSAL 820
Query: 1212 EARCIAILEGIKWMEDKGISSFCIRSDAKNAIT*LINNNNQLCWFSKTILDDCQFLLNNF 1391
A A +E ++ +G S + SD+K I + N W +LD+ + L F
Sbjct: 821 NAETEAAIEALRCASLRGYSKIEMESDSKVLIDSIKGNVCTKAWTILPLLDEIRRLSAGF 880
Query: 1392 S 1394
S
Sbjct: 881 S 881
>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 765
Score = 144 bits (363), Expect = 1e-31
Identities = 123/494 (24%), Positives = 208/494 (42%), Gaps = 7/494 (1%)
Frame = +3
Query: 6 QGGLGFKDLRIFNRAMLAKLAWSLIHSPNELWVKILKCKYFKNCHPLHARKPSDSSWL*K 185
+GGLGF+DL FN+A++AK W L+ PN L +++K +Y+KN +A+ S+ S++ +
Sbjct: 257 RGGLGFRDLPSFNQALVAKQGWRLVRYPNSLMARVMKARYYKNSTFWNAKVGSNPSFIWR 316
Query: 186 GIEVGLEIIRGNSIWEVRNGSSIHAFTDN*IPEASL--PICHTYPNPDMLVADFIDPSTR 359
I G ++I+ W + +G + + D IP + PI + +VAD ID S
Sbjct: 317 SILWGSQVIKKGVRWRIGDGKKVLVYKDKWIPRPATFQPISPKTLPHETVVADLID-SEN 375
Query: 360 TWNVELINSFFTVENAQKICRTRVPLTGNDRLVLLH-TKNGDFSVKTAYKALAGEL*FIQ 536
W V+ + F E+ + I + +P + VL H K G++SVK+ Y+ LA F
Sbjct: 376 KWRVDRLEQHFMKEDIEAILKILLPSGKEEDEVLWHFDKKGEYSVKSGYQ-LALNQNFPN 434
Query: 537 NPHPSQPT---YKAIWSFPTLPKIQLFFWKCIENILTTNARLMQYRTQTDACCLCDTNSI 707
P S + +K W K+++F W+ ++NIL T L + R+ + C +
Sbjct: 435 EPESSNSSSRLWKIPWMLDLPEKVKIFMWRALKNILPTAENLWKRRSLQEPICQRCKLQV 494
Query: 708 ETAEHLLLFCPYAKSVWSNTSFGHYVTFEEEESSGIDIMNWFGNWLKSNNSVAIKHAIFV 887
ET H+L+ C A+ +W + + + D + + S +S A + V
Sbjct: 495 ETVSHVLIECKAARKIWDLAP----LIVQPSKDHNQDFFSAIQE-MWSRSSTAEAELMIV 549
Query: 888 TAWCIWKDRCFRIFQNKNVTPISTANSAMKLIADIDRSMPAVQTXXXXXXXXXXXXXXXG 1067
W IW R IF+ K A A ++ R
Sbjct: 550 YCWVIWSARNKFIFEGKKSDSRFLAAKADSVLKAYQRVSKPGNVHGAKDRGIDQQKWKPP 609
Query: 1068 LPDMCSILHCDASFDKDTNETGSGLVLNDMTGTFKGCKLIKGVAR-TAEEARCIAILEGI 1244
++ L+ DA+ + G G ++ D G + + R A AI G+
Sbjct: 610 SQNVLK-LNVDAAVSTKXQKVGLGAIVRDAEGKILAVGIKQAQFRERVSLAEAEAIHWGL 668
Query: 1245 KWMEDKGISSFCIRSDAKNAIT*LINNNNQLCWFSKTILDDCQFLLNNFSFSRLDYVNRK 1424
+ SS + SD K + L+NN IL D + +F + ++ R
Sbjct: 669 QVANQISSSSLIVESDCKEVVE-LLNNTKGSRTEIHWILSDVRRESKDFKQVQFSFIPRT 727
Query: 1425 FISSADKAAKYCKR 1466
+ A AK+ R
Sbjct: 728 CNTYAHALAKFALR 741
>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
Length = 1452
Score = 144 bits (362), Expect = 1e-31
Identities = 123/494 (24%), Positives = 207/494 (41%), Gaps = 7/494 (1%)
Frame = +3
Query: 6 QGGLGFKDLRIFNRAMLAKLAWSLIHSPNELWVKILKCKYFKNCHPLHARKPSDSSWL*K 185
+GGLGF+DL FN+A++AK W L+ PN L +++K +Y+KN +A+ S+ S++ +
Sbjct: 944 RGGLGFRDLPSFNQALVAKQGWRLVRYPNSLMARVMKARYYKNSTFWNAKVGSNPSFIWR 1003
Query: 186 GIEVGLEIIRGNSIWEVRNGSSIHAFTDN*IPEASL--PICHTYPNPDMLVADFIDPSTR 359
I G ++I+ W + +G + + D IP + PI + +VAD ID S
Sbjct: 1004 SILWGSQVIKKGVRWRIGDGKKVLVYKDKWIPRPATFQPISPKTLPHETVVADLID-SEN 1062
Query: 360 TWNVELINSFFTVENAQKICRTRVPLTGNDRLVLLH-TKNGDFSVKTAYKALAGEL*FIQ 536
W V+ + F E+ + I + +P + VL H K G++SVK+ Y+ LA F
Sbjct: 1063 KWRVDRLEQHFMKEDIEAILKILLPSGKEEDEVLWHFDKKGEYSVKSGYQ-LALNQNFPN 1121
Query: 537 NPHPSQPT---YKAIWSFPTLPKIQLFFWKCIENILTTNARLMQYRTQTDACCLCDTNSI 707
P S + +K W K+++F W+ ++NIL T L + R+ + C +
Sbjct: 1122 EPESSNSSSRLWKIPWMLDLPEKVKIFMWRALKNILPTAENLWKRRSLQEPICQRCKLQV 1181
Query: 708 ETAEHLLLFCPYAKSVWSNTSFGHYVTFEEEESSGIDIMNWFGNWLKSNNSVAIKHAIFV 887
ET H+L+ C A+ +W + + + D + + S +S A + V
Sbjct: 1182 ETVSHVLIECKAARKIWDLAP----LIVQPSKDHNQDFFSAIQE-MWSRSSTAEAELMIV 1236
Query: 888 TAWCIWKDRCFRIFQNKNVTPISTANSAMKLIADIDRSMPAVQTXXXXXXXXXXXXXXXG 1067
W IW R IF+ K A A ++ R
Sbjct: 1237 YCWVIWSARNKFIFEGKKSDSRFLAAKADSVLKAYQRVSKPGNVHGAKDRGIDQQKWKPP 1296
Query: 1068 LPDMCSILHCDASFDKDTNETGSGLVLNDMTGTFKGCKLIKGVAR-TAEEARCIAILEGI 1244
++ L+ DA+ + G G ++ D G + + R A AI G+
Sbjct: 1297 SQNVLK-LNVDAAVSTKDQKVGLGAIVRDAEGKILAVGIKQAQFRERVSLAEAEAIHWGL 1355
Query: 1245 KWMEDKGISSFCIRSDAKNAIT*LINNNNQLCWFSKTILDDCQFLLNNFSFSRLDYVNRK 1424
+ SS + SD K + L+NN IL D + F + ++ R
Sbjct: 1356 QVANQISSSSLIVESDCKEVVE-LLNNTKGSRTEIHWILSDVRRESKEFKQVQFSFIPRT 1414
Query: 1425 FISSADKAAKYCKR 1466
+ A AK+ R
Sbjct: 1415 CNTYAHALAKFALR 1428
>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
Japonica Group]
Length = 1382
Score = 143 bits (360), Expect = 2e-31
Identities = 122/488 (25%), Positives = 207/488 (42%), Gaps = 17/488 (3%)
Frame = +3
Query: 9 GGLGFKDLRIFNRAMLAKLAWSLIHSPNELWVKILKCKYFKNCHPLHARKPSDSSWL*KG 188
GG+GF++ FN+AML + W L+ P+ L ++LK +YF N A +P S+ +
Sbjct: 866 GGMGFREFTTFNQAMLGRQCWRLLTDPDSLCSRVLKGRYFPNSSFWEAAQPKSPSFTWRS 925
Query: 189 IEVGLEIIRGNSIWEVRNGSSIHAFTDN*IPEASLPICHTY-PNP-DMLVADFIDPSTRT 362
+ G E++ W V +G +I F+DN IP + T P P D V+ ++ R
Sbjct: 926 LLFGRELLAKGVRWGVGDGKTIKIFSDNWIPGFRPQLVTTLSPFPTDATVSCLMNEDARC 985
Query: 363 WNVELINSFFTVENAQKICRTRVPLTGN-DRLVLLHTKNGDFSVKTAYKALAGEL*FIQN 539
W+ +LI S F V+ A++I + + G+ D H K G +SV++AY E F
Sbjct: 986 WDGDLIRSLFPVDIAKEILQIPISRHGDADFASWPHDKLGLYSVRSAYNLARSEAFFADQ 1045
Query: 540 PH----------PSQPTYKAIWSFPTLPKIQLFFWKCIENILTTNARL-MQYRTQTDACC 686
+ SQ +K +W K+++ W+ L T +L ++ TD C
Sbjct: 1046 SNSGRGMASRLLESQKDWKGLWKINAPGKMKITLWRAAHECLATGFQLRRRHIPSTDGCV 1105
Query: 687 LCDTNSIETAEHLLLFCPYAKSVWSNTSFGHYVTFEEEESSGIDIMNWFGNWLKSNNSVA 866
C N +T EH+ LFCP+A +W V S + W ++LK +S A
Sbjct: 1106 FC--NRDDTVEHVFLFCPFAAQIWEEIKGKCAVKLGRNGFS--TMRQWIFDFLKRGSSHA 1161
Query: 867 IKHAIFVTAWCIWKDRCFRIFQNKNVTPISTANSAMKLIADIDRSMPAVQTXXXXXXXXX 1046
+ VT W IW+ R +N N T + +K+++ +D +
Sbjct: 1162 -NTLLAVTFWHIWEAR--NNTKNNNGT-VHPQRVVIKILSYVDMILKHNTKTVDGQRGGN 1217
Query: 1047 XXXXXXGLPDMCSI--LHCDASFDKDTNETGSGLVLNDMTG-TFKGCKLIKGVARTAEEA 1217
P S+ ++ DA+ + G G ++ D TG C + E A
Sbjct: 1218 TQAIPRWQPPPASVWMINSDAAIFSSSRTMGVGALIRDNTGKCLVACSEMISDVVLPELA 1277
Query: 1218 RCIAILEGIKWMEDKGISSFCIRSDAKNAIT*LINNNNQLCWFSKTILDDCQFLLNNFSF 1397
+AI + +++G+ + SD I + + +++D + L + F
Sbjct: 1278 EALAIRRALGLAKEEGLEHIVMASDCLTVIRRIQTSGRDRSGVG-CVIEDIKKLASTFVL 1336
Query: 1398 SRLDYVNR 1421
+VNR
Sbjct: 1337 CSFMHVNR 1344
>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
protein OsJ_32156 [Oryza sativa Japonica Group]
Length = 1339
Score = 143 bits (360), Expect = 2e-31
Identities = 122/488 (25%), Positives = 207/488 (42%), Gaps = 17/488 (3%)
Frame = +3
Query: 9 GGLGFKDLRIFNRAMLAKLAWSLIHSPNELWVKILKCKYFKNCHPLHARKPSDSSWL*KG 188
GG+GF++ FN+AML + W L+ P+ L ++LK +YF N A +P S+ +
Sbjct: 823 GGMGFREFTTFNQAMLGRQCWRLLTDPDSLCSRVLKGRYFPNSSFWEAAQPKSPSFTWRS 882
Query: 189 IEVGLEIIRGNSIWEVRNGSSIHAFTDN*IPEASLPICHTY-PNP-DMLVADFIDPSTRT 362
+ G E++ W V +G +I F+DN IP + T P P D V+ ++ R
Sbjct: 883 LLFGRELLAKGVRWGVGDGKTIKIFSDNWIPGFRPQLVTTLSPFPTDATVSCLMNEDARC 942
Query: 363 WNVELINSFFTVENAQKICRTRVPLTGN-DRLVLLHTKNGDFSVKTAYKALAGEL*FIQN 539
W+ +LI S F V+ A++I + + G+ D H K G +SV++AY E F
Sbjct: 943 WDGDLIRSLFPVDIAKEILQIPISRHGDADFASWPHDKLGLYSVRSAYNLARSEAFFADQ 1002
Query: 540 PH----------PSQPTYKAIWSFPTLPKIQLFFWKCIENILTTNARL-MQYRTQTDACC 686
+ SQ +K +W K+++ W+ L T +L ++ TD C
Sbjct: 1003 SNSGRGMASRLLESQKDWKGLWKINAPGKMKITLWRAAHECLATGFQLRRRHIPSTDGCV 1062
Query: 687 LCDTNSIETAEHLLLFCPYAKSVWSNTSFGHYVTFEEEESSGIDIMNWFGNWLKSNNSVA 866
C N +T EH+ LFCP+A +W V S + W ++LK +S A
Sbjct: 1063 FC--NRDDTVEHVFLFCPFAAQIWEEIKGKCAVKLGRNGFS--TMRQWIFDFLKRGSSHA 1118
Query: 867 IKHAIFVTAWCIWKDRCFRIFQNKNVTPISTANSAMKLIADIDRSMPAVQTXXXXXXXXX 1046
+ VT W IW+ R +N N T + +K+++ +D +
Sbjct: 1119 -NTLLAVTFWHIWEAR--NNTKNNNGT-VHPQRVVIKILSYVDMILKHNTKTVDGQRGGN 1174
Query: 1047 XXXXXXGLPDMCSI--LHCDASFDKDTNETGSGLVLNDMTG-TFKGCKLIKGVARTAEEA 1217
P S+ ++ DA+ + G G ++ D TG C + E A
Sbjct: 1175 TQAIPRWQPPPASVWMINSDAAIFSSSRTMGVGALIRDNTGKCLVACSEMISDVVLPELA 1234
Query: 1218 RCIAILEGIKWMEDKGISSFCIRSDAKNAIT*LINNNNQLCWFSKTILDDCQFLLNNFSF 1397
+AI + +++G+ + SD I + + +++D + L + F
Sbjct: 1235 EALAIRRALGLAKEEGLEHIVMASDCLTVIRRIQTSGRDRSGVG-CVIEDIKKLASTFVL 1293
Query: 1398 SRLDYVNR 1421
+VNR
Sbjct: 1294 CSFMHVNR 1301