BLASTX nr result

ID: Papaver27_contig00046386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00046386
         (1867 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004247637.1| PREDICTED: F-box/kelch-repeat protein At3g23...    48   4e-06
ref|XP_004247638.1| PREDICTED: F-box/kelch-repeat protein At3g23...    48   4e-06
ref|XP_006362187.1| PREDICTED: F-box/kelch-repeat protein At3g23...    49   9e-06

>ref|XP_004247637.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like isoform 1
           [Solanum lycopersicum]
          Length = 381

 Score = 47.8 bits (112), Expect(3) = 4e-06
 Identities = 27/86 (31%), Positives = 42/86 (48%)
 Frame = +2

Query: 140 SGVLVNGDLHWLGKCQSNFSLLSFDINHETFKEMQLPGEILGMNNDXXXXXXXXXXXXXX 319
           S   VNG  HWL K   +++++S D+  E ++E+  P    G                  
Sbjct: 232 SAKFVNGKFHWLDK---HWNIISMDLAGEKWEEVDQPCCFKGCG-----FLKLGVFESDL 283

Query: 320 STYLNPVKIHVELWEMRDYGVQESWT 397
           S + N    HV++W M++YGV+ESWT
Sbjct: 284 SVFCNYAWTHVDVWVMKEYGVKESWT 309



 Score = 26.9 bits (58), Expect(3) = 4e-06
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +1

Query: 61  VQVYSLASNSWKIAQNY 111
           V++YSL S+SWK  +NY
Sbjct: 207 VKIYSLKSDSWKRVKNY 223



 Score = 23.9 bits (50), Expect(3) = 4e-06
 Identities = 14/56 (25%), Positives = 25/56 (44%)
 Frame = +3

Query: 402 TKRYVIDHESIICDQEYFRLVSSFKNGEILLLGCNRLFLYEPKLGSARELKIDNVS 569
           TK + +        + ++ ++     GEILL   +R   Y PK  S R L +  ++
Sbjct: 309 TKMFTVKSPEDSGGRIFYPIILMSNEGEILLKFGSRFVKYNPKDDSIRYLDVTKLA 364


>ref|XP_004247638.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like isoform 2
           [Solanum lycopersicum]
          Length = 356

 Score = 47.8 bits (112), Expect(3) = 4e-06
 Identities = 27/86 (31%), Positives = 42/86 (48%)
 Frame = +2

Query: 140 SGVLVNGDLHWLGKCQSNFSLLSFDINHETFKEMQLPGEILGMNNDXXXXXXXXXXXXXX 319
           S   VNG  HWL K   +++++S D+  E ++E+  P    G                  
Sbjct: 207 SAKFVNGKFHWLDK---HWNIISMDLAGEKWEEVDQPCCFKGCG-----FLKLGVFESDL 258

Query: 320 STYLNPVKIHVELWEMRDYGVQESWT 397
           S + N    HV++W M++YGV+ESWT
Sbjct: 259 SVFCNYAWTHVDVWVMKEYGVKESWT 284



 Score = 26.9 bits (58), Expect(3) = 4e-06
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +1

Query: 61  VQVYSLASNSWKIAQNY 111
           V++YSL S+SWK  +NY
Sbjct: 182 VKIYSLKSDSWKRVKNY 198



 Score = 23.9 bits (50), Expect(3) = 4e-06
 Identities = 14/56 (25%), Positives = 25/56 (44%)
 Frame = +3

Query: 402 TKRYVIDHESIICDQEYFRLVSSFKNGEILLLGCNRLFLYEPKLGSARELKIDNVS 569
           TK + +        + ++ ++     GEILL   +R   Y PK  S R L +  ++
Sbjct: 284 TKMFTVKSPEDSGGRIFYPIILMSNEGEILLKFGSRFVKYNPKDDSIRYLDVTKLA 339


>ref|XP_006362187.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like isoform X3
           [Solanum tuberosum] gi|565393030|ref|XP_006362188.1|
           PREDICTED: F-box/kelch-repeat protein At3g23880-like
           isoform X4 [Solanum tuberosum]
           gi|565393032|ref|XP_006362189.1| PREDICTED:
           F-box/kelch-repeat protein At3g23880-like isoform X5
           [Solanum tuberosum]
          Length = 382

 Score = 48.5 bits (114), Expect(3) = 9e-06
 Identities = 27/82 (32%), Positives = 41/82 (50%)
 Frame = +2

Query: 152 VNGDLHWLGKCQSNFSLLSFDINHETFKEMQLPGEILGMNNDXXXXXXXXXXXXXXSTYL 331
           VNG LHWL K   +++++S D+  E + E+  P    G                  S + 
Sbjct: 236 VNGKLHWLDK---HWNIISMDLADEKWAEVDQPCCFKGCG-----FLKLGVFESDLSVFC 287

Query: 332 NPVKIHVELWEMRDYGVQESWT 397
           N    HV++W M++YGV+ESWT
Sbjct: 288 NYAWTHVDIWVMKEYGVKESWT 309



 Score = 25.0 bits (53), Expect(3) = 9e-06
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +1

Query: 61  VQVYSLASNSWKIAQNY 111
           V++YSL S+SWK  ++Y
Sbjct: 207 VKIYSLKSDSWKRVKDY 223



 Score = 23.9 bits (50), Expect(3) = 9e-06
 Identities = 13/56 (23%), Positives = 25/56 (44%)
 Frame = +3

Query: 402 TKRYVIDHESIICDQEYFRLVSSFKNGEILLLGCNRLFLYEPKLGSARELKIDNVS 569
           TK + +        + ++ ++     GEILL   +R   Y PK  S R + +  ++
Sbjct: 309 TKMFTVKSPEDSMGRIFYPIILMSNEGEILLKFGSRFMKYNPKDDSIRYVDVTKLA 364


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