BLASTX nr result
ID: Papaver27_contig00046112
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver27_contig00046112 (600 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_189164.1| ribonuclease H-like protein [Arabidopsis thalia... 47 3e-07 ref|XP_006487438.1| PREDICTED: putative ribonuclease H protein A... 41 9e-06 >ref|NP_189164.1| ribonuclease H-like protein [Arabidopsis thaliana] gi|9294184|dbj|BAB02086.1| reverse transcriptase-like protein [Arabidopsis thaliana] gi|332643482|gb|AEE77003.1| ribonuclease H-like protein [Arabidopsis thaliana] Length = 343 Score = 47.4 bits (111), Expect(2) = 3e-07 Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 11/116 (9%) Frame = -1 Query: 591 FILGSCLLWNIWKMRNDMVFSDVQFSKERCMKLA------WDDYRKHCHQQSPSQHNLSQ 430 F L +LW +WK RN +VF S + ++ A W+D + + H+ Sbjct: 117 FNLAIWILWRLWKSRNQLVFQQKSISWQNTLQRARNDVQEWEDTNTYVQSLNQQVHSSRH 176 Query: 429 EI*YIEAETWVPPPAFYVKVNVDAAF-----KLNKGVVAQIEKGIFLVASHTVLQT 277 + + W PP+ ++K N D AF G + + E G+++ + + T Sbjct: 177 QQPTMARTKWQRPPSTWIKYNYDGAFNHQTRNAKAGWLMRDENGVYMGSGQAIGST 232 Score = 33.1 bits (74), Expect(2) = 3e-07 Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 1/94 (1%) Frame = -3 Query: 283 TDTSSLKDEVRAYNLGV*LVKILYLEKVIVEGDAKSVSTAINGP-MNQAPANIKMEILKA 107 T + SL+ E +A + + KVI EGD+K V +N +N N I + Sbjct: 232 TTSDSLESEFQALIIAMQHAWSQGYRKVIFEGDSKQVEELMNNEKLNFGRFNW---IREG 288 Query: 106 KESCSEFENIVFKSVPRSANEITHVLCQYANEEN 5 + FE VFK VPR+ N+ +L ++ + N Sbjct: 289 RFWQKRFEEAVFKWVPRTNNQPADILAKHHLQPN 322 >ref|XP_006487438.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis] Length = 335 Score = 40.8 bits (94), Expect(2) = 9e-06 Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 6/79 (7%) Frame = -1 Query: 573 LLWNIWKMRNDMVFSDVQF------SKERCMKLAWDDYRKHCHQQSPSQHNLSQEI*YIE 412 LLW IW RN VF ++ +K +K A+ R + +++L QE Sbjct: 121 LLWIIWYARNKFVFEGMKIDPGISVAKAEAIKEAYK--RTQFPEMLVGKNSLRQE----- 173 Query: 411 AETWVPPPAFYVKVNVDAA 355 W PPP +VK+NVDAA Sbjct: 174 QNKWAPPPPRWVKINVDAA 192 Score = 34.7 bits (78), Expect(2) = 9e-06 Identities = 25/81 (30%), Positives = 36/81 (44%) Frame = -3 Query: 259 EVRAYNLGV*LVKILYLEKVIVEGDAKSVSTAINGPMNQAPANIKMEILKAKESCSEFEN 80 E A G L K ++ VI+E D+K+ IN N + I + S+F + Sbjct: 231 EAEADEWGTYLAKEEGMQAVILETDSKATVDLINNNGNYM-TEVHWIISDIQSLMSQFSH 289 Query: 79 IVFKSVPRSANEITHVLCQYA 17 V K +PRS N H L + A Sbjct: 290 FVAKFIPRSCNTCAHKLAKIA 310