BLASTX nr result

ID: Papaver27_contig00046041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00046041
         (520 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004424623.1| PREDICTED: ubiquitin-40S ribosomal protein S...    56   6e-06

>ref|XP_004424623.1| PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Ceratotherium
           simum simum]
          Length = 155

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
 Frame = -3

Query: 512 KRKIEEKETFPIQQQKFIFAGKELRD-----SFNIDKFYNEATIYLTSGLCGGSRRRGKD 348
           K KI+ KE  P+ QQ+ IFAGK+L D      +NI K   E+T++L   LCGG+++R K 
Sbjct: 27  KAKIQNKEGIPLDQQRLIFAGKQLEDGRTLSDYNIQK---ESTLHLVLRLCGGAKKRKKS 83

Query: 347 ISKGQRNIFK 318
            +  ++N+ K
Sbjct: 84  YTTSKKNMRK 93


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