BLASTX nr result
ID: Papaver27_contig00045065
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00045065
(1083 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat... 483 e-134
ref|XP_007207055.1| hypothetical protein PRUPE_ppb002198mg [Prun... 470 e-130
ref|XP_004305093.1| PREDICTED: putative pentatricopeptide repeat... 464 e-128
ref|XP_007010336.1| Pentatricopeptide repeat (PPR) superfamily p... 464 e-128
ref|XP_006429514.1| hypothetical protein CICLE_v10011209mg [Citr... 457 e-126
ref|XP_003539649.2| PREDICTED: putative pentatricopeptide repeat... 444 e-122
ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat... 440 e-121
ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat... 440 e-121
ref|XP_006341113.1| PREDICTED: putative pentatricopeptide repeat... 439 e-120
ref|XP_002323645.2| pentatricopeptide repeat-containing family p... 438 e-120
ref|XP_004246883.1| PREDICTED: putative pentatricopeptide repeat... 437 e-120
gb|EXB41949.1| hypothetical protein L484_002200 [Morus notabilis] 427 e-117
ref|XP_007133846.1| hypothetical protein PHAVU_011G213900g [Phas... 425 e-116
ref|XP_002526706.1| pentatricopeptide repeat-containing protein,... 410 e-112
ref|XP_004487107.1| PREDICTED: putative pentatricopeptide repeat... 402 e-109
ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago t... 401 e-109
ref|XP_002884698.1| pentatricopeptide repeat-containing protein ... 398 e-108
ref|NP_187494.1| pentatricopeptide repeat-containing protein [Ar... 397 e-108
ref|XP_006418524.1| hypothetical protein EUTSA_v10002816mg [Eutr... 397 e-108
ref|XP_006299039.1| hypothetical protein CARUB_v10015176mg [Caps... 388 e-105
>ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 483 bits (1242), Expect = e-134
Identities = 228/358 (63%), Positives = 286/358 (79%)
Frame = +2
Query: 8 MRNEGTLPDNFTFPFALKACALLGDHGFGMEIHGDVVKCGYEMDVFVMTSLIRLYAKCRC 187
MR+EG LP+NFTFPF LKACA L D G++IH VVK G++ DVFV TSL+ LYAKC
Sbjct: 103 MRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGY 162
Query: 188 MKEAQRLFNEMPEPNVVAWTVIIAGYVESKGYNEALCMFTKMWHMGYRPDSYTMVRLISA 367
+++A ++F+++P+ NVV+WT II+GY+ + EA+ MF ++ M PDS+T+VR++SA
Sbjct: 163 LEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSA 222
Query: 368 ASNLGDARNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDVVAW 547
+ LGD + +WI K + +MGM NVFV TSL+DM KCG+ME ARSVFD + KD+V+W
Sbjct: 223 CTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSW 282
Query: 548 SAMIGGYSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFIEK 727
AMI GY+ NGLPKEAIDLFLQMQ+E +KPD +T+V VLSACARLGALELGEW SG +++
Sbjct: 283 GAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDR 342
Query: 728 NEFSLNPFLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKAAFGL 907
NEF NP LGTALID+YAKCGSM+RAWE FK MK +D VVWNA+ISGLAM G+VK +FGL
Sbjct: 343 NEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGL 402
Query: 908 FAQMEKLGIQPDDNTFLGLLCGCTHAGLVDEGLKYFDGMSRVYSLNPRVEHYGCMVDL 1081
F Q+EKLGI+PD NTF+GLLCGCTHAGLVDEG +YF+ M R +SL P +EHYGCMVDL
Sbjct: 403 FGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDL 460
Score = 200 bits (508), Expect = 1e-48
Identities = 108/301 (35%), Positives = 173/301 (57%)
Frame = +2
Query: 101 IHGDVVKCGYEMDVFVMTSLIRLYAKCRCMKEAQRLFNEMPEPNVVAWTVIIAGYVESKG 280
+H +++ G D +++ ++R + LF+++ +PN+ W +I G V +
Sbjct: 33 LHAHLLRFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDC 92
Query: 281 YNEALCMFTKMWHMGYRPDSYTMVRLISAASNLGDARNVDWIEKHVRKMGMENNVFVATS 460
+++A+ + M G+ P+++T ++ A + L D + I V K G + +VFV TS
Sbjct: 93 FDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTS 152
Query: 461 LLDMCVKCGSMEMARSVFDRLRAKDVVAWSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPD 640
L+ + KCG +E A VFD + K+VV+W+A+I GY G +EAID+F ++ + + PD
Sbjct: 153 LVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPD 212
Query: 641 SFTMVAVLSACARLGALELGEWASGFIEKNEFSLNPFLGTALIDMYAKCGSMNRAWEQFK 820
SFT+V VLSAC +LG L GEW I + N F+GT+L+DMYAKCG+M +A F
Sbjct: 213 SFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFD 272
Query: 821 EMKNRDSVVWNAVISGLAMTGHVKAAFGLFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDE 1000
M +D V W A+I G A+ G K A LF QM++ ++PD T +G+L C G ++
Sbjct: 273 GMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALEL 332
Query: 1001 G 1003
G
Sbjct: 333 G 333
Score = 108 bits (271), Expect = 3e-21
Identities = 57/205 (27%), Positives = 108/205 (52%)
Frame = +2
Query: 389 RNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDVVAWSAMIGGY 568
+++ + H+ + G+ ++ ++ +L R +F +++ ++ W+ MI G
Sbjct: 28 KHLKHLHAHLLRFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGL 87
Query: 569 SSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFIEKNEFSLNP 748
SN +AI+ + M+ E P++FT VL ACARL L+LG + K F +
Sbjct: 88 VSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDV 147
Query: 749 FLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKAAFGLFAQMEKL 928
F+ T+L+ +YAKCG + A + F ++ +++ V W A+ISG G + A +F ++ ++
Sbjct: 148 FVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEM 207
Query: 929 GIQPDDNTFLGLLCGCTHAGLVDEG 1003
+ PD T + +L CT G ++ G
Sbjct: 208 NLAPDSFTIVRVLSACTQLGDLNSG 232
>ref|XP_007207055.1| hypothetical protein PRUPE_ppb002198mg [Prunus persica]
gi|462402697|gb|EMJ08254.1| hypothetical protein
PRUPE_ppb002198mg [Prunus persica]
Length = 636
Score = 470 bits (1209), Expect = e-130
Identities = 220/359 (61%), Positives = 278/359 (77%)
Frame = +2
Query: 5 SMRNEGTLPDNFTFPFALKACALLGDHGFGMEIHGDVVKCGYEMDVFVMTSLIRLYAKCR 184
SMR EG LP++FTFPF LKACA D G+ IH VVK G+ DV+V TSL+ LYAKC
Sbjct: 52 SMRTEGILPNSFTFPFVLKACARRSDFPLGLNIHTLVVKTGFNFDVYVKTSLLCLYAKCG 111
Query: 185 CMKEAQRLFNEMPEPNVVAWTVIIAGYVESKGYNEALCMFTKMWHMGYRPDSYTMVRLIS 364
++ A ++F+++P+ NVV+WT II GY+ + Y EA+ F ++ MG RPDS+++VR++S
Sbjct: 112 YLEHAHKVFDDIPDKNVVSWTAIICGYIGAGQYREAIDTFRRLLEMGLRPDSFSLVRVLS 171
Query: 365 AASNLGDARNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDVVA 544
A LGD + +WI++++ ++GM NVFVATSL+D+ KCG ME AR +FD + KD+V+
Sbjct: 172 ACGKLGDLSSGEWIDRYITEIGMGKNVFVATSLVDLYAKCGQMEKARGIFDGMLEKDIVS 231
Query: 545 WSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFIE 724
WS+MI GY+SNGLPKEAIDLF QMQKE +KPD + MV VLSACARLGALELGEWA ++
Sbjct: 232 WSSMIQGYASNGLPKEAIDLFFQMQKENLKPDCYAMVGVLSACARLGALELGEWAGSLMD 291
Query: 725 KNEFSLNPFLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKAAFG 904
K+EF +NP LGTALIDMYAKCG M +AWE FK MK RD VVWNA +SGLAM GHVK FG
Sbjct: 292 KHEFFVNPVLGTALIDMYAKCGCMIQAWEVFKGMKKRDHVVWNAAMSGLAMNGHVKTVFG 351
Query: 905 LFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDEGLKYFDGMSRVYSLNPRVEHYGCMVDL 1081
LF Q+EK GI+PD NTF+GLLCGC+HAGLVDEG +YF+ M+ V+SL +EHYGCMVDL
Sbjct: 352 LFGQVEKNGIRPDGNTFMGLLCGCSHAGLVDEGRRYFNNMTSVFSLAHTIEHYGCMVDL 410
Score = 185 bits (470), Expect = 3e-44
Identities = 100/266 (37%), Positives = 151/266 (56%)
Frame = +2
Query: 206 LFNEMPEPNVVAWTVIIAGYVESKGYNEALCMFTKMWHMGYRPDSYTMVRLISAASNLGD 385
+F++ +PN+ W +I G V +++A+ F M G P+S+T ++ A + D
Sbjct: 18 VFDQTTQPNIFLWNTMIRGLVSDDCFDDAIEFFISMRTEGILPNSFTFPFVLKACARRSD 77
Query: 386 ARNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDVVAWSAMIGG 565
I V K G +V+V TSLL + KCG +E A VFD + K+VV+W+A+I G
Sbjct: 78 FPLGLNIHTLVVKTGFNFDVYVKTSLLCLYAKCGYLEHAHKVFDDIPDKNVVSWTAIICG 137
Query: 566 YSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFIEKNEFSLN 745
Y G +EAID F ++ + ++PDSF++V VLSAC +LG L GEW +I + N
Sbjct: 138 YIGAGQYREAIDTFRRLLEMGLRPDSFSLVRVLSACGKLGDLSSGEWIDRYITEIGMGKN 197
Query: 746 PFLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKAAFGLFAQMEK 925
F+ T+L+D+YAKCG M +A F M +D V W+++I G A G K A LF QM+K
Sbjct: 198 VFVATSLVDLYAKCGQMEKARGIFDGMLEKDIVSWSSMIQGYASNGLPKEAIDLFFQMQK 257
Query: 926 LGIQPDDNTFLGLLCGCTHAGLVDEG 1003
++PD +G+L C G ++ G
Sbjct: 258 ENLKPDCYAMVGVLSACARLGALELG 283
Score = 102 bits (253), Expect = 4e-19
Identities = 53/173 (30%), Positives = 92/173 (53%)
Frame = +2
Query: 485 GSMEMARSVFDRLRAKDVVAWSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVL 664
G +R VFD+ ++ W+ MI G S+ +AI+ F+ M+ E + P+SFT VL
Sbjct: 10 GHASYSRLVFDQTTQPNIFLWNTMIRGLVSDDCFDDAIEFFISMRTEGILPNSFTFPFVL 69
Query: 665 SACARLGALELGEWASGFIEKNEFSLNPFLGTALIDMYAKCGSMNRAWEQFKEMKNRDSV 844
ACAR LG + K F+ + ++ T+L+ +YAKCG + A + F ++ +++ V
Sbjct: 70 KACARRSDFPLGLNIHTLVVKTGFNFDVYVKTSLLCLYAKCGYLEHAHKVFDDIPDKNVV 129
Query: 845 VWNAVISGLAMTGHVKAAFGLFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDEG 1003
W A+I G G + A F ++ ++G++PD + + +L C G + G
Sbjct: 130 SWTAIICGYIGAGQYREAIDTFRRLLEMGLRPDSFSLVRVLSACGKLGDLSSG 182
>ref|XP_004305093.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Fragaria vesca subsp. vesca]
Length = 688
Score = 464 bits (1194), Expect = e-128
Identities = 219/359 (61%), Positives = 275/359 (76%)
Frame = +2
Query: 5 SMRNEGTLPDNFTFPFALKACALLGDHGFGMEIHGDVVKCGYEMDVFVMTSLIRLYAKCR 184
SMR EG PD++TFPF LKACA D G+ +H VVK G++ DV+V TSL+ LYAKC
Sbjct: 104 SMRTEGLFPDSYTFPFVLKACARRLDLQIGLSVHTLVVKTGFDFDVYVKTSLLCLYAKCG 163
Query: 185 CMKEAQRLFNEMPEPNVVAWTVIIAGYVESKGYNEALCMFTKMWHMGYRPDSYTMVRLIS 364
M+ A ++F+++PE +VV+WT I++GY+ + + EA+ F ++ MG RPDS ++VR IS
Sbjct: 164 YMEHAHKVFDDLPEKSVVSWTAIVSGYIGAGKFREAIDAFLRLLEMGLRPDSLSLVRAIS 223
Query: 365 AASNLGDARNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDVVA 544
A S LGD R+ +WI+ ++ ++GM NVFVATSL+D+ KCG+ME AR VFD + KDVV
Sbjct: 224 ACSQLGDLRSGEWIDDYITEIGMARNVFVATSLVDLYAKCGNMEKARFVFDGIAEKDVVV 283
Query: 545 WSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFIE 724
WS+MI GY+ NGLPKEA+DLF QMQKE +KPD + MV VLSACARLGAL LGEWAS ++
Sbjct: 284 WSSMIQGYALNGLPKEAVDLFFQMQKENLKPDCYAMVGVLSACARLGALGLGEWASNLVD 343
Query: 725 KNEFSLNPFLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKAAFG 904
+NE NP LGTALIDMYAKCGS+ +AWE FK MK +D VVWNA +SGLAM GHVKA FG
Sbjct: 344 RNEIFNNPVLGTALIDMYAKCGSIVQAWEVFKGMKKKDHVVWNAAMSGLAMNGHVKAVFG 403
Query: 905 LFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDEGLKYFDGMSRVYSLNPRVEHYGCMVDL 1081
LF Q+EK G++ NTF+GLLCGC HAGLVDEG YF+ M+RVYSL P +EHYGCMVDL
Sbjct: 404 LFGQVEKYGVRATGNTFMGLLCGCCHAGLVDEGRSYFNSMTRVYSLTPTIEHYGCMVDL 462
Score = 198 bits (503), Expect = 4e-48
Identities = 109/300 (36%), Positives = 170/300 (56%)
Frame = +2
Query: 104 HGDVVKCGYEMDVFVMTSLIRLYAKCRCMKEAQRLFNEMPEPNVVAWTVIIAGYVESKGY 283
H +++ G + D ++T L+R R A +F+ EPNV + II G V + +
Sbjct: 36 HARLLRLGLDQDNHLLTLLLRSAFDFRQTNYALLVFHRTAEPNVYLFNTIIRGLVSHECW 95
Query: 284 NEALCMFTKMWHMGYRPDSYTMVRLISAASNLGDARNVDWIEKHVRKMGMENNVFVATSL 463
+A+ ++ M G PDSYT ++ A + D + + V K G + +V+V TSL
Sbjct: 96 EDAIRLYGSMRTEGLFPDSYTFPFVLKACARRLDLQIGLSVHTLVVKTGFDFDVYVKTSL 155
Query: 464 LDMCVKCGSMEMARSVFDRLRAKDVVAWSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPDS 643
L + KCG ME A VFD L K VV+W+A++ GY G +EAID FL++ + ++PDS
Sbjct: 156 LCLYAKCGYMEHAHKVFDDLPEKSVVSWTAIVSGYIGAGKFREAIDAFLRLLEMGLRPDS 215
Query: 644 FTMVAVLSACARLGALELGEWASGFIEKNEFSLNPFLGTALIDMYAKCGSMNRAWEQFKE 823
++V +SAC++LG L GEW +I + + N F+ T+L+D+YAKCG+M +A F
Sbjct: 216 LSLVRAISACSQLGDLRSGEWIDDYITEIGMARNVFVATSLVDLYAKCGNMEKARFVFDG 275
Query: 824 MKNRDSVVWNAVISGLAMTGHVKAAFGLFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDEG 1003
+ +D VVW+++I G A+ G K A LF QM+K ++PD +G+L C G + G
Sbjct: 276 IAEKDVVVWSSMIQGYALNGLPKEAVDLFFQMQKENLKPDCYAMVGVLSACARLGALGLG 335
>ref|XP_007010336.1| Pentatricopeptide repeat (PPR) superfamily protein, putative isoform
1 [Theobroma cacao] gi|590566803|ref|XP_007010337.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508727249|gb|EOY19146.1| Pentatricopeptide repeat
(PPR) superfamily protein, putative isoform 1 [Theobroma
cacao] gi|508727250|gb|EOY19147.1| Pentatricopeptide
repeat (PPR) superfamily protein, putative isoform 1
[Theobroma cacao]
Length = 688
Score = 464 bits (1193), Expect = e-128
Identities = 218/360 (60%), Positives = 283/360 (78%)
Frame = +2
Query: 2 ASMRNEGTLPDNFTFPFALKACALLGDHGFGMEIHGDVVKCGYEMDVFVMTSLIRLYAKC 181
ASMR++G LP++FTFPF LKA A L D G+ IH VVK G++ D+FV T L+ LYAKC
Sbjct: 103 ASMRSQGFLPNSFTFPFVLKAYARLLDLQLGIRIHALVVKLGFDCDIFVKTGLLCLYAKC 162
Query: 182 RCMKEAQRLFNEMPEPNVVAWTVIIAGYVESKGYNEALCMFTKMWHMGYRPDSYTMVRLI 361
C+ A ++F+++PE NVV+WT +I+GY++ Y EA+ MF+K+ MG RPDS+++VR++
Sbjct: 163 GCLDRAIKVFDDIPEKNVVSWTAMISGYIDVGRYREAVNMFSKLLEMGLRPDSFSLVRVL 222
Query: 362 SAASNLGDARNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDVV 541
+A ++LGD + +WI++ + + G+ +VFVATS++DM KCG+ME AR FD + KD+V
Sbjct: 223 AACAHLGDLNSGEWIDRSITQFGLSRDVFVATSVVDMYAKCGNMEKARLAFDGIPEKDIV 282
Query: 542 AWSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFI 721
WS MI GY+SNGLPKEA+DLF QMQKEK+ PD + MV VLSACARLGALELG+WAS +
Sbjct: 283 TWSTMIQGYASNGLPKEALDLFFQMQKEKLAPDCYVMVGVLSACARLGALELGDWASKLM 342
Query: 722 EKNEFSLNPFLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKAAF 901
++ EF NP LGTALIDM+AKCGS+ +A+E FK MK +D VVWNA ISGLAM GHVKAAF
Sbjct: 343 DRAEFLSNPVLGTALIDMFAKCGSIAQAFEIFKRMKEKDLVVWNAAISGLAMNGHVKAAF 402
Query: 902 GLFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDEGLKYFDGMSRVYSLNPRVEHYGCMVDL 1081
GLF+QMEK G+ P+ NTF+GLLC CTH GLVD+G +YFD MSRV+SL P +EHYGCMVDL
Sbjct: 403 GLFSQMEKSGVLPNGNTFIGLLCCCTHVGLVDDGHRYFDSMSRVFSLTPTIEHYGCMVDL 462
Score = 190 bits (482), Expect = 1e-45
Identities = 101/302 (33%), Positives = 166/302 (54%)
Frame = +2
Query: 98 EIHGDVVKCGYEMDVFVMTSLIRLYAKCRCMKEAQRLFNEMPEPNVVAWTVIIAGYVESK 277
++H + + G +++ +++ A +FN+ +PN+ W +I G V
Sbjct: 34 QVHAALFRLGLHQHNYLLNIILKATFHFGQTNYACLIFNQTKQPNIYLWNTMIQGLVSGD 93
Query: 278 GYNEALCMFTKMWHMGYRPDSYTMVRLISAASNLGDARNVDWIEKHVRKMGMENNVFVAT 457
+ EA + M G+ P+S+T ++ A + L D + I V K+G + ++FV T
Sbjct: 94 CFLEAAQFYASMRSQGFLPNSFTFPFVLKAYARLLDLQLGIRIHALVVKLGFDCDIFVKT 153
Query: 458 SLLDMCVKCGSMEMARSVFDRLRAKDVVAWSAMIGGYSSNGLPKEAIDLFLQMQKEKMKP 637
LL + KCG ++ A VFD + K+VV+W+AMI GY G +EA+++F ++ + ++P
Sbjct: 154 GLLCLYAKCGCLDRAIKVFDDIPEKNVVSWTAMISGYIDVGRYREAVNMFSKLLEMGLRP 213
Query: 638 DSFTMVAVLSACARLGALELGEWASGFIEKNEFSLNPFLGTALIDMYAKCGSMNRAWEQF 817
DSF++V VL+ACA LG L GEW I + S + F+ T+++DMYAKCG+M +A F
Sbjct: 214 DSFSLVRVLAACAHLGDLNSGEWIDRSITQFGLSRDVFVATSVVDMYAKCGNMEKARLAF 273
Query: 818 KEMKNRDSVVWNAVISGLAMTGHVKAAFGLFAQMEKLGIQPDDNTFLGLLCGCTHAGLVD 997
+ +D V W+ +I G A G K A LF QM+K + PD +G+L C G ++
Sbjct: 274 DGIPEKDIVTWSTMIQGYASNGLPKEALDLFFQMQKEKLAPDCYVMVGVLSACARLGALE 333
Query: 998 EG 1003
G
Sbjct: 334 LG 335
Score = 107 bits (266), Expect = 1e-20
Identities = 57/205 (27%), Positives = 107/205 (52%)
Frame = +2
Query: 389 RNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDVVAWSAMIGGY 568
R++ + + ++G+ + ++ +L G A +F++ + ++ W+ MI G
Sbjct: 30 RHLKQVHAALFRLGLHQHNYLLNIILKATFHFGQTNYACLIFNQTKQPNIYLWNTMIQGL 89
Query: 569 SSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFIEKNEFSLNP 748
S EA + M+ + P+SFT VL A ARL L+LG + K F +
Sbjct: 90 VSGDCFLEAAQFYASMRSQGFLPNSFTFPFVLKAYARLLDLQLGIRIHALVVKLGFDCDI 149
Query: 749 FLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKAAFGLFAQMEKL 928
F+ T L+ +YAKCG ++RA + F ++ ++ V W A+ISG G + A +F+++ ++
Sbjct: 150 FVKTGLLCLYAKCGCLDRAIKVFDDIPEKNVVSWTAMISGYIDVGRYREAVNMFSKLLEM 209
Query: 929 GIQPDDNTFLGLLCGCTHAGLVDEG 1003
G++PD + + +L C H G ++ G
Sbjct: 210 GLRPDSFSLVRVLAACAHLGDLNSG 234
>ref|XP_006429514.1| hypothetical protein CICLE_v10011209mg [Citrus clementina]
gi|568855070|ref|XP_006481133.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At3g08820-like [Citrus sinensis]
gi|557531571|gb|ESR42754.1| hypothetical protein
CICLE_v10011209mg [Citrus clementina]
Length = 688
Score = 457 bits (1177), Expect = e-126
Identities = 213/359 (59%), Positives = 274/359 (76%)
Frame = +2
Query: 5 SMRNEGTLPDNFTFPFALKACALLGDHGFGMEIHGDVVKCGYEMDVFVMTSLIRLYAKCR 184
SMRNEG LP NFTFPF LKACA D G+ H +VK G + D FV TSL+ LY C
Sbjct: 104 SMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLLNLYVHCG 163
Query: 185 CMKEAQRLFNEMPEPNVVAWTVIIAGYVESKGYNEALCMFTKMWHMGYRPDSYTMVRLIS 364
+ +A ++F+++P+ NVV+WT II+GY+ EA+ MF ++ H G +PDS+++VR+++
Sbjct: 164 YLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSFSIVRVLT 223
Query: 365 AASNLGDARNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDVVA 544
A + LGD WI +V + GM NVFVATSL+D+ KCG+ME AR VFD++ KD+V+
Sbjct: 224 ACTQLGDLSTAKWIHGYVNEAGMGRNVFVATSLVDLYAKCGNMEKARRVFDQMPEKDIVS 283
Query: 545 WSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFIE 724
WS+MI GY+SNG PKEA+D+F MQ+E +KPD +TMV VLSACA LGALELG WAS F+E
Sbjct: 284 WSSMIQGYASNGFPKEALDMFYNMQRENLKPDRYTMVGVLSACASLGALELGVWASSFME 343
Query: 725 KNEFSLNPFLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKAAFG 904
+NEF NP LGT LIDMYAKCG M +A + F+EMK++D VVWNAV+SGL+M G+VK AFG
Sbjct: 344 RNEFLSNPVLGTTLIDMYAKCGRMAQACKVFREMKDKDQVVWNAVVSGLSMNGYVKVAFG 403
Query: 905 LFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDEGLKYFDGMSRVYSLNPRVEHYGCMVDL 1081
+F Q+EK GIQP+ NTF+GLLCGCTHAGLVDEG ++F+ MSRV+SL P +EHYGCMVDL
Sbjct: 404 VFGQLEKCGIQPNGNTFVGLLCGCTHAGLVDEGRQFFNSMSRVFSLTPMIEHYGCMVDL 462
Score = 189 bits (481), Expect = 1e-45
Identities = 95/302 (31%), Positives = 171/302 (56%)
Frame = +2
Query: 101 IHGDVVKCGYEMDVFVMTSLIRLYAKCRCMKEAQRLFNEMPEPNVVAWTVIIAGYVESKG 280
+H +++ G + D +++ L+R +F++ EPN+ + +I G+V +
Sbjct: 35 VHAILLRVGLDQDSYLLNLLLRSCFHFGQTNYTHLIFSQTKEPNIFLYNTMIRGFVSNDC 94
Query: 281 YNEALCMFTKMWHMGYRPDSYTMVRLISAASNLGDARNVDWIEKHVRKMGMENNVFVATS 460
+ A+ + M + G+ P ++T ++ A + D + + K G++ + FV TS
Sbjct: 95 FQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTS 154
Query: 461 LLDMCVKCGSMEMARSVFDRLRAKDVVAWSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPD 640
LL++ V CG + A VFD + K+VV+W+A+I GY + G +EAI++F ++ +KPD
Sbjct: 155 LLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPD 214
Query: 641 SFTMVAVLSACARLGALELGEWASGFIEKNEFSLNPFLGTALIDMYAKCGSMNRAWEQFK 820
SF++V VL+AC +LG L +W G++ + N F+ T+L+D+YAKCG+M +A F
Sbjct: 215 SFSIVRVLTACTQLGDLSTAKWIHGYVNEAGMGRNVFVATSLVDLYAKCGNMEKARRVFD 274
Query: 821 EMKNRDSVVWNAVISGLAMTGHVKAAFGLFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDE 1000
+M +D V W+++I G A G K A +F M++ ++PD T +G+L C G ++
Sbjct: 275 QMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPDRYTMVGVLSACASLGALEL 334
Query: 1001 GL 1006
G+
Sbjct: 335 GV 336
Score = 103 bits (257), Expect = 1e-19
Identities = 52/200 (26%), Positives = 104/200 (52%)
Frame = +2
Query: 389 RNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDVVAWSAMIGGY 568
+ + ++ + ++G++ + ++ LL C G +F + + ++ ++ MI G+
Sbjct: 30 KQLKYVHAILLRVGLDQDSYLLNLLLRSCFHFGQTNYTHLIFSQTKEPNIFLYNTMIRGF 89
Query: 569 SSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFIEKNEFSLNP 748
SN + AI+ + M+ E P +FT VL ACAR +LG + I K +
Sbjct: 90 VSNDCFQHAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDE 149
Query: 749 FLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKAAFGLFAQMEKL 928
F+ T+L+++Y CG + A + F ++ +++ V W A+ISG G+++ A +F ++
Sbjct: 150 FVKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHR 209
Query: 929 GIQPDDNTFLGLLCGCTHAG 988
G++PD + + +L CT G
Sbjct: 210 GLKPDSFSIVRVLTACTQLG 229
>ref|XP_003539649.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like isoform X1 [Glycine max]
gi|571494895|ref|XP_006592973.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At3g08820-like isoform X2 [Glycine max]
Length = 681
Score = 444 bits (1141), Expect = e-122
Identities = 216/362 (59%), Positives = 275/362 (75%), Gaps = 2/362 (0%)
Frame = +2
Query: 2 ASMRNEGTLPDNFTFPFALKACALLGDHGF--GMEIHGDVVKCGYEMDVFVMTSLIRLYA 175
ASMR G PDNFTFPF LKAC L H F G+ +H V+K G++ DVFV T L+ LY+
Sbjct: 95 ASMRQHGFAPDNFTFPFVLKACTRL-PHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYS 153
Query: 176 KCRCMKEAQRLFNEMPEPNVVAWTVIIAGYVESKGYNEALCMFTKMWHMGYRPDSYTMVR 355
K + +A+++F+E+PE NVV+WT II GY+ES + EAL +F + MG RPDS+T+VR
Sbjct: 154 KNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVR 213
Query: 356 LISAASNLGDARNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKD 535
++ A S +GD + WI+ ++R+ G NVFVATSL+DM KCGSME AR VFD + KD
Sbjct: 214 ILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKD 273
Query: 536 VVAWSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASG 715
VV WSA+I GY+SNG+PKEA+D+F +MQ+E ++PD + MV V SAC+RLGALELG WA G
Sbjct: 274 VVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARG 333
Query: 716 FIEKNEFSLNPFLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKA 895
++ +EF NP LGTALID YAKCGS+ +A E FK M+ +D VV+NAVISGLAM GHV A
Sbjct: 334 LMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGA 393
Query: 896 AFGLFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDEGLKYFDGMSRVYSLNPRVEHYGCMV 1075
AFG+F QM K+G+QPD NTF+GLLCGCTHAGLVD+G +YF GMS V+S+ P +EHYGCMV
Sbjct: 394 AFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMV 453
Query: 1076 DL 1081
DL
Sbjct: 454 DL 455
Score = 185 bits (470), Expect = 3e-44
Identities = 99/303 (32%), Positives = 168/303 (55%), Gaps = 1/303 (0%)
Frame = +2
Query: 98 EIHGDVVKCGYEMDVFVMTSLIRLYAKCRCMKEAQRLFNEMPEPNVVAWTVIIAGYVESK 277
+ H +++ G D +++ L+R + A +F + P PN+ + +I G V +
Sbjct: 26 QCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSND 85
Query: 278 GYNEALCMFTKMWHMGYRPDSYTMVRLISAASNLGDARNVDW-IEKHVRKMGMENNVFVA 454
+ +A+ ++ M G+ PD++T ++ A + L +V + V K G + +VFV
Sbjct: 86 AFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVK 145
Query: 455 TSLLDMCVKCGSMEMARSVFDRLRAKDVVAWSAMIGGYSSNGLPKEAIDLFLQMQKEKMK 634
T L+ + K G + AR VFD + K+VV+W+A+I GY +G EA+ LF + + ++
Sbjct: 146 TGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLR 205
Query: 635 PDSFTMVAVLSACARLGALELGEWASGFIEKNEFSLNPFLGTALIDMYAKCGSMNRAWEQ 814
PDSFT+V +L AC+R+G L G W G++ ++ N F+ T+L+DMYAKCGSM A
Sbjct: 206 PDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRV 265
Query: 815 FKEMKNRDSVVWNAVISGLAMTGHVKAAFGLFAQMEKLGIQPDDNTFLGLLCGCTHAGLV 994
F M +D V W+A+I G A G K A +F +M++ ++PD +G+ C+ G +
Sbjct: 266 FDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGAL 325
Query: 995 DEG 1003
+ G
Sbjct: 326 ELG 328
>ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 440 bits (1131), Expect = e-121
Identities = 203/359 (56%), Positives = 270/359 (75%)
Frame = +2
Query: 5 SMRNEGTLPDNFTFPFALKACALLGDHGFGMEIHGDVVKCGYEMDVFVMTSLIRLYAKCR 184
SMR G LP+NFT PF LKACA D G++IH +VK GY+ DVFV TSL+ LY KC
Sbjct: 104 SMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCD 163
Query: 185 CMKEAQRLFNEMPEPNVVAWTVIIAGYVESKGYNEALCMFTKMWHMGYRPDSYTMVRLIS 364
+A ++F+++P+ NVV+WT II GY+ S + EA+ F K+ MG +PDS+++V++++
Sbjct: 164 NFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLA 223
Query: 365 AASNLGDARNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDVVA 544
A + LGD + +WI++++ GM NVFVATSLLDM VKCG++E A +F + KD+V+
Sbjct: 224 ACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVS 283
Query: 545 WSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFIE 724
WS MI GY+ NGLP++A+DLF QMQ E +KPD +TMV VLSACA LGAL+LG WAS ++
Sbjct: 284 WSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMD 343
Query: 725 KNEFSLNPFLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKAAFG 904
+NEF NP LGTALIDMY+KCGS+ +AWE F MK +D VVWNA++ GL+M GH KA F
Sbjct: 344 RNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFS 403
Query: 905 LFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDEGLKYFDGMSRVYSLNPRVEHYGCMVDL 1081
LF+ +EK GI+PD+NTF+GLLCGCTH G V+EG ++F+ M RV+SL P +EHYGCMVDL
Sbjct: 404 LFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDL 462
Score = 194 bits (492), Expect = 7e-47
Identities = 103/302 (34%), Positives = 173/302 (57%)
Frame = +2
Query: 101 IHGDVVKCGYEMDVFVMTSLIRLYAKCRCMKEAQRLFNEMPEPNVVAWTVIIAGYVESKG 280
IH +++ + D +++ ++ ++ +F+++ EPN+ W +I G V
Sbjct: 35 IHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDC 94
Query: 281 YNEALCMFTKMWHMGYRPDSYTMVRLISAASNLGDARNVDWIEKHVRKMGMENNVFVATS 460
+++A+ ++ M G+ P+++T+ ++ A + D R I + K G +++VFV TS
Sbjct: 95 FDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTS 154
Query: 461 LLDMCVKCGSMEMARSVFDRLRAKDVVAWSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPD 640
LL + VKC + + A VFD + K+VV+W+A+I GY S+G +EAI F ++ + +KPD
Sbjct: 155 LLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPD 214
Query: 641 SFTMVAVLSACARLGALELGEWASGFIEKNEFSLNPFLGTALIDMYAKCGSMNRAWEQFK 820
SF++V VL+ACARLG GEW +I + N F+ T+L+DMY KCG++ RA F
Sbjct: 215 SFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFS 274
Query: 821 EMKNRDSVVWNAVISGLAMTGHVKAAFGLFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDE 1000
M +D V W+ +I G A G + A LF QM+ ++PD T +G+L C G +D
Sbjct: 275 AMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDL 334
Query: 1001 GL 1006
G+
Sbjct: 335 GI 336
>ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 440 bits (1131), Expect = e-121
Identities = 203/359 (56%), Positives = 270/359 (75%)
Frame = +2
Query: 5 SMRNEGTLPDNFTFPFALKACALLGDHGFGMEIHGDVVKCGYEMDVFVMTSLIRLYAKCR 184
SMR G LP+NFT PF LKACA D G++IH +VK GY+ DVFV TSL+ LY KC
Sbjct: 104 SMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCD 163
Query: 185 CMKEAQRLFNEMPEPNVVAWTVIIAGYVESKGYNEALCMFTKMWHMGYRPDSYTMVRLIS 364
+A ++F+++P+ NVV+WT II GY+ S + EA+ F K+ MG +PDS+++V++++
Sbjct: 164 NFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLA 223
Query: 365 AASNLGDARNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDVVA 544
A + LGD + +WI++++ GM NVFVATSLLDM VKCG++E A +F + KD+V+
Sbjct: 224 ACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVS 283
Query: 545 WSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFIE 724
WS MI GY+ NGLP++A+DLF QMQ E +KPD +TMV VLSACA LGAL+LG WAS ++
Sbjct: 284 WSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMD 343
Query: 725 KNEFSLNPFLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKAAFG 904
+NEF NP LGTALIDMY+KCGS+ +AWE F MK +D VVWNA++ GL+M GH KA F
Sbjct: 344 RNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFS 403
Query: 905 LFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDEGLKYFDGMSRVYSLNPRVEHYGCMVDL 1081
LF+ +EK GI+PD+NTF+GLLCGCTH G V+EG ++F+ M RV+SL P +EHYGCMVDL
Sbjct: 404 LFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDL 462
Score = 194 bits (492), Expect = 7e-47
Identities = 103/302 (34%), Positives = 173/302 (57%)
Frame = +2
Query: 101 IHGDVVKCGYEMDVFVMTSLIRLYAKCRCMKEAQRLFNEMPEPNVVAWTVIIAGYVESKG 280
IH +++ + D +++ ++ ++ +F+++ EPN+ W +I G V
Sbjct: 35 IHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDC 94
Query: 281 YNEALCMFTKMWHMGYRPDSYTMVRLISAASNLGDARNVDWIEKHVRKMGMENNVFVATS 460
+++A+ ++ M G+ P+++T+ ++ A + D R I + K G +++VFV TS
Sbjct: 95 FDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTS 154
Query: 461 LLDMCVKCGSMEMARSVFDRLRAKDVVAWSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPD 640
LL + VKC + + A VFD + K+VV+W+A+I GY S+G +EAI F ++ + +KPD
Sbjct: 155 LLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPD 214
Query: 641 SFTMVAVLSACARLGALELGEWASGFIEKNEFSLNPFLGTALIDMYAKCGSMNRAWEQFK 820
SF++V VL+ACARLG GEW +I + N F+ T+L+DMY KCG++ RA F
Sbjct: 215 SFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFS 274
Query: 821 EMKNRDSVVWNAVISGLAMTGHVKAAFGLFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDE 1000
M +D V W+ +I G A G + A LF QM+ ++PD T +G+L C G +D
Sbjct: 275 AMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDL 334
Query: 1001 GL 1006
G+
Sbjct: 335 GI 336
>ref|XP_006341113.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Solanum tuberosum]
Length = 687
Score = 439 bits (1128), Expect = e-120
Identities = 206/358 (57%), Positives = 268/358 (74%)
Frame = +2
Query: 8 MRNEGTLPDNFTFPFALKACALLGDHGFGMEIHGDVVKCGYEMDVFVMTSLIRLYAKCRC 187
MRNEG LP+NFTFPF LK+C L D G++ HG VVK G++ DVFV T L+ YA+C
Sbjct: 104 MRNEGFLPNNFTFPFLLKSCTRLSDFELGVKAHGLVVKGGFDYDVFVKTGLVCFYARCGF 163
Query: 188 MKEAQRLFNEMPEPNVVAWTVIIAGYVESKGYNEALCMFTKMWHMGYRPDSYTMVRLISA 367
+ +A ++F+++PE NVV+WT I+ GY++ + EA+ +F + MG PDS+T+VR++SA
Sbjct: 164 LDDAHQMFDDIPEKNVVSWTAIMTGYIDFGKFKEAIGLFRRSLEMGLSPDSFTLVRVLSA 223
Query: 368 ASNLGDARNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDVVAW 547
S +GD +WI ++ +M M NVFV T L+DM KCG M AR VFD + KDVV+W
Sbjct: 224 CSRVGDVSAGEWIHRYAVEMDMGRNVFVNTGLVDMYAKCGEMAKAREVFDEMVEKDVVSW 283
Query: 548 SAMIGGYSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFIEK 727
SAMI GY+ NGLPKEA+++F +MQ+E ++PD ++MV VLSACARLGALE+GEWA ++
Sbjct: 284 SAMIQGYAVNGLPKEAMEVFYRMQRENVRPDCYSMVGVLSACARLGALEVGEWACKLMDM 343
Query: 728 NEFSLNPFLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKAAFGL 907
NEF N LGTALIDMYAKCG M AWE FK+M +D V+WNAV+SGLAM G+VK+AF
Sbjct: 344 NEFLSNAVLGTALIDMYAKCGRMVSAWEIFKQMLVKDRVIWNAVVSGLAMHGYVKSAFCC 403
Query: 908 FAQMEKLGIQPDDNTFLGLLCGCTHAGLVDEGLKYFDGMSRVYSLNPRVEHYGCMVDL 1081
F Q+EKLGI+P+ NTF+GLLC CTHAGLVD+G KYF M+ +YSL P +EHYGCMVDL
Sbjct: 404 FGQVEKLGIKPNGNTFIGLLCACTHAGLVDDGRKYFQSMTHLYSLEPAIEHYGCMVDL 461
Score = 192 bits (487), Expect = 3e-46
Identities = 105/319 (32%), Positives = 177/319 (55%), Gaps = 3/319 (0%)
Frame = +2
Query: 56 LKACALLGDHGFGM--EIHGDVVKCGYEMDVFVMTSLIRLYAK-CRCMKEAQRLFNEMPE 226
LKA G F IH +++ G++ + +++ L++ A+ +FN+ E
Sbjct: 16 LKAALFHGFQSFNQLKHIHARLIRTGFDQNNYLLNLLLKFTLNNFNNPNYAKLVFNQTQE 75
Query: 227 PNVVAWTVIIAGYVESKGYNEALCMFTKMWHMGYRPDSYTMVRLISAASNLGDARNVDWI 406
PN+ + +I G V + +++++ F M + G+ P+++T L+ + + L D
Sbjct: 76 PNIFLYNTMIRGLVSNNCFHQSIAYFHGMRNEGFLPNNFTFPFLLKSCTRLSDFELGVKA 135
Query: 407 EKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDVVAWSAMIGGYSSNGLP 586
V K G + +VFV T L+ +CG ++ A +FD + K+VV+W+A++ GY G
Sbjct: 136 HGLVVKGGFDYDVFVKTGLVCFYARCGFLDDAHQMFDDIPEKNVVSWTAIMTGYIDFGKF 195
Query: 587 KEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFIEKNEFSLNPFLGTAL 766
KEAI LF + + + PDSFT+V VLSAC+R+G + GEW + + + N F+ T L
Sbjct: 196 KEAIGLFRRSLEMGLSPDSFTLVRVLSACSRVGDVSAGEWIHRYAVEMDMGRNVFVNTGL 255
Query: 767 IDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKAAFGLFAQMEKLGIQPDD 946
+DMYAKCG M +A E F EM +D V W+A+I G A+ G K A +F +M++ ++PD
Sbjct: 256 VDMYAKCGEMAKAREVFDEMVEKDVVSWSAMIQGYAVNGLPKEAMEVFYRMQRENVRPDC 315
Query: 947 NTFLGLLCGCTHAGLVDEG 1003
+ +G+L C G ++ G
Sbjct: 316 YSMVGVLSACARLGALEVG 334
Score = 162 bits (410), Expect = 2e-37
Identities = 98/306 (32%), Positives = 164/306 (53%), Gaps = 3/306 (0%)
Frame = +2
Query: 20 GTLPDNFTFPFALKACALLGDHGFGMEIHGDVVKCGYEMDVFVMTSLIRLYAKCRCMKEA 199
G PD+FT L AC+ +GD G IH V+ +VFV T L+ +YAKC M +A
Sbjct: 209 GLSPDSFTLVRVLSACSRVGDVSAGEWIHRYAVEMDMGRNVFVNTGLVDMYAKCGEMAKA 268
Query: 200 QRLFNEMPEPNVVAWTVIIAGYVESKGYNEALCMFTKMWHMGYRPDSYTMVRLISAASNL 379
+ +F+EM E +VV+W+ +I GY + EA+ +F +M RPD Y+MV ++SA + L
Sbjct: 269 REVFDEMVEKDVVSWSAMIQGYAVNGLPKEAMEVFYRMQRENVRPDCYSMVGVLSACARL 328
Query: 380 GDARNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDVVAWSAMI 559
G +W K + +N + T+L+DM KCG M A +F ++ KD V W+A++
Sbjct: 329 GALEVGEWACKLMDMNEFLSNAVLGTALIDMYAKCGRMVSAWEIFKQMLVKDRVIWNAVV 388
Query: 560 GGYSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFIEKNEFS 739
G + +G K A F Q++K +KP+ T + +L AC G ++ G + + +S
Sbjct: 389 SGLAMHGYVKSAFCCFGQVEKLGIKPNGNTFIGLLCACTHAGLVDDGRKYFQSMT-HLYS 447
Query: 740 LNPFLGT--ALIDMYAKCGSMNRAWEQFKEMKNR-DSVVWNAVISGLAMTGHVKAAFGLF 910
L P + ++D+ + G ++ A + M + ++V+W A++SG + K A +
Sbjct: 448 LEPAIEHYGCMVDLLGRAGLLDEAHSLIESMPMKANAVIWGALLSGCRLHRDTKLAEHVL 507
Query: 911 AQMEKL 928
Q+ +L
Sbjct: 508 KQLIEL 513
>ref|XP_002323645.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550321449|gb|EEF05406.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 682
Score = 438 bits (1127), Expect = e-120
Identities = 210/359 (58%), Positives = 266/359 (74%)
Frame = +2
Query: 5 SMRNEGTLPDNFTFPFALKACALLGDHGFGMEIHGDVVKCGYEMDVFVMTSLIRLYAKCR 184
SMR EG PD+FTFPF LKACA + D G+++H VVK G E D FV SLI LY KC
Sbjct: 98 SMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCG 157
Query: 185 CMKEAQRLFNEMPEPNVVAWTVIIAGYVESKGYNEALCMFTKMWHMGYRPDSYTMVRLIS 364
+ A ++F+++P+ N +WT I+GYV EA+ MF ++ MG RPDS+++V ++S
Sbjct: 158 FIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLS 217
Query: 365 AASNLGDARNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDVVA 544
A GD R+ +WI++++ + GM NVFVAT+L+D KCG+ME ARSVFD + K++V+
Sbjct: 218 ACKRTGDLRSGEWIDEYITENGMARNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVS 277
Query: 545 WSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFIE 724
WS+MI GY+SNGLPKEA+DLF +M E +KPD + MV VL +CARLGALELG+WAS I
Sbjct: 278 WSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLIN 337
Query: 725 KNEFSLNPFLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKAAFG 904
NEF N LGTALIDMYAKCG M+RAWE F+ M+ +D VVWNA ISGLAM+GHVK A G
Sbjct: 338 GNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALG 397
Query: 905 LFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDEGLKYFDGMSRVYSLNPRVEHYGCMVDL 1081
LF QMEK GI+PD NTF+GLLC CTHAGLV+EG +YF+ M VY+L P +EHYGCMVDL
Sbjct: 398 LFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVYTLTPEIEHYGCMVDL 456
Score = 191 bits (485), Expect = 5e-46
Identities = 101/301 (33%), Positives = 167/301 (55%)
Frame = +2
Query: 101 IHGDVVKCGYEMDVFVMTSLIRLYAKCRCMKEAQRLFNEMPEPNVVAWTVIIAGYVESKG 280
IH +++ G + D +++ ++R + R+ ++ EPN+ + +I G V +
Sbjct: 29 IHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDC 88
Query: 281 YNEALCMFTKMWHMGYRPDSYTMVRLISAASNLGDARNVDWIEKHVRKMGMENNVFVATS 460
+ E++ ++ M G PDS+T ++ A + + D+ + V K G E + FV S
Sbjct: 89 FQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKIS 148
Query: 461 LLDMCVKCGSMEMARSVFDRLRAKDVVAWSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPD 640
L+++ KCG ++ A VFD + K+ +W+A I GY G +EAID+F ++ + ++PD
Sbjct: 149 LINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPD 208
Query: 641 SFTMVAVLSACARLGALELGEWASGFIEKNEFSLNPFLGTALIDMYAKCGSMNRAWEQFK 820
SF++V VLSAC R G L GEW +I +N + N F+ TAL+D Y KCG+M RA F
Sbjct: 209 SFSLVEVLSACKRTGDLRSGEWIDEYITENGMARNVFVATALVDFYGKCGNMERARSVFD 268
Query: 821 EMKNRDSVVWNAVISGLAMTGHVKAAFGLFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDE 1000
M ++ V W+++I G A G K A LF +M G++PD +G+LC C G ++
Sbjct: 269 GMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALEL 328
Query: 1001 G 1003
G
Sbjct: 329 G 329
Score = 107 bits (267), Expect = 9e-21
Identities = 66/245 (26%), Positives = 127/245 (51%), Gaps = 7/245 (2%)
Frame = +2
Query: 353 RLISAASNLGDARNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAK 532
RLI S L +++ I + ++G++ + ++ +L G+ + + D+ +
Sbjct: 15 RLIQGFSCL---KHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEP 71
Query: 533 DVVAWSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWAS 712
++ ++ MI G N +E+I+++ M+KE + PDSFT VL ACAR+ ELG
Sbjct: 72 NIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMH 131
Query: 713 GFIEKNEFSLNPFLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVK 892
+ K + F+ +LI++Y KCG ++ A++ F ++ +++ W A ISG G +
Sbjct: 132 SLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCR 191
Query: 893 AAFGLFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDEGLKYFD------GMSR-VYSLNPR 1051
A +F ++ ++G++PD + + +L C G + G ++ D GM+R V+
Sbjct: 192 EAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSG-EWIDEYITENGMARNVFVATAL 250
Query: 1052 VEHYG 1066
V+ YG
Sbjct: 251 VDFYG 255
>ref|XP_004246883.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Solanum lycopersicum]
Length = 688
Score = 437 bits (1125), Expect = e-120
Identities = 208/359 (57%), Positives = 269/359 (74%), Gaps = 1/359 (0%)
Frame = +2
Query: 8 MRNEGTLPDNFTFPFALKACALLGDHGFGMEIHGDVVKCGYEMDVFVMTSLIRLYAKCRC 187
MRNEG LP+NFTFPF LK+C L D G++ HG VVK G++ DVFV T L+ YA+C
Sbjct: 104 MRNEGFLPNNFTFPFLLKSCTRLSDFELGVKAHGLVVKGGFDYDVFVKTGLVCFYARCGF 163
Query: 188 MKEAQRLFNEMPEPNVVAWTVIIAGYVESKGYNEALCMFTKMWHMGYRPDSYTMVRLISA 367
+ +A ++F+++PE NVV+WT II GY++ + EA+ +F + MG PDS+T+VR++SA
Sbjct: 164 LDDAHQMFDDIPEKNVVSWTAIITGYIDFGKFKEAIDLFRRSLEMGLSPDSFTLVRVLSA 223
Query: 368 ASNLGDARNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDVVAW 547
S +GD +WI + +MG+ NVFV T L+DM KCG M AR VFD + KDVV+W
Sbjct: 224 CSRVGDVSAGEWIHGYAVEMGIGRNVFVNTGLVDMYAKCGEMAKAREVFDEMVEKDVVSW 283
Query: 548 SAMIGGYSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFIEK 727
SAMI GY+ NGLPKEA+++F MQ+E ++PD ++MV VLSAC+RLGALE+GEWAS ++
Sbjct: 284 SAMIQGYAVNGLPKEALEVFYTMQRENVRPDCYSMVGVLSACSRLGALEVGEWASKLMDM 343
Query: 728 NEFSLNPFLGTALIDMYAKCGSMNRAWEQFKEM-KNRDSVVWNAVISGLAMTGHVKAAFG 904
NEF N LGTALIDMYAKCG M AWE FK+M +D V+WNAV+SGLAM G+VK+AF
Sbjct: 344 NEFLSNAVLGTALIDMYAKCGRMVSAWEIFKQMLVKKDRVIWNAVLSGLAMHGYVKSAFC 403
Query: 905 LFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDEGLKYFDGMSRVYSLNPRVEHYGCMVDL 1081
F+Q+EKLGI+P+ NTF+GLLC CTHAGLVDEG KYF M+ +YSL P +EHYGCMVDL
Sbjct: 404 CFSQVEKLGIKPNGNTFIGLLCACTHAGLVDEGRKYFQSMTHLYSLEPSIEHYGCMVDL 462
Score = 194 bits (494), Expect = 4e-47
Identities = 107/319 (33%), Positives = 177/319 (55%), Gaps = 3/319 (0%)
Frame = +2
Query: 56 LKACALLGDHGFGM--EIHGDVVKCGYEMDVFVMTSLIRLYAK-CRCMKEAQRLFNEMPE 226
LK G F IH +++ G++ + +++ L++ A+ +FN+ E
Sbjct: 16 LKTALFNGFQSFNQLKHIHARLIRAGFDQNNYLLNLLLKFTLNNFNNPNYAKLVFNQAQE 75
Query: 227 PNVVAWTVIIAGYVESKGYNEALCMFTKMWHMGYRPDSYTMVRLISAASNLGDARNVDWI 406
PN+ + +I G V + +++++ F M + G+ P+++T L+ + + L D
Sbjct: 76 PNIFLYNTMIRGLVSNNCFHQSIEFFHGMRNEGFLPNNFTFPFLLKSCTRLSDFELGVKA 135
Query: 407 EKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDVVAWSAMIGGYSSNGLP 586
V K G + +VFV T L+ +CG ++ A +FD + K+VV+W+A+I GY G
Sbjct: 136 HGLVVKGGFDYDVFVKTGLVCFYARCGFLDDAHQMFDDIPEKNVVSWTAIITGYIDFGKF 195
Query: 587 KEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFIEKNEFSLNPFLGTAL 766
KEAIDLF + + + PDSFT+V VLSAC+R+G + GEW G+ + N F+ T L
Sbjct: 196 KEAIDLFRRSLEMGLSPDSFTLVRVLSACSRVGDVSAGEWIHGYAVEMGIGRNVFVNTGL 255
Query: 767 IDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKAAFGLFAQMEKLGIQPDD 946
+DMYAKCG M +A E F EM +D V W+A+I G A+ G K A +F M++ ++PD
Sbjct: 256 VDMYAKCGEMAKAREVFDEMVEKDVVSWSAMIQGYAVNGLPKEALEVFYTMQRENVRPDC 315
Query: 947 NTFLGLLCGCTHAGLVDEG 1003
+ +G+L C+ G ++ G
Sbjct: 316 YSMVGVLSACSRLGALEVG 334
Score = 167 bits (422), Expect = 9e-39
Identities = 103/307 (33%), Positives = 165/307 (53%), Gaps = 4/307 (1%)
Frame = +2
Query: 20 GTLPDNFTFPFALKACALLGDHGFGMEIHGDVVKCGYEMDVFVMTSLIRLYAKCRCMKEA 199
G PD+FT L AC+ +GD G IHG V+ G +VFV T L+ +YAKC M +A
Sbjct: 209 GLSPDSFTLVRVLSACSRVGDVSAGEWIHGYAVEMGIGRNVFVNTGLVDMYAKCGEMAKA 268
Query: 200 QRLFNEMPEPNVVAWTVIIAGYVESKGYNEALCMFTKMWHMGYRPDSYTMVRLISAASNL 379
+ +F+EM E +VV+W+ +I GY + EAL +F M RPD Y+MV ++SA S L
Sbjct: 269 REVFDEMVEKDVVSWSAMIQGYAVNGLPKEALEVFYTMQRENVRPDCYSMVGVLSACSRL 328
Query: 380 GDARNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAK-DVVAWSAM 556
G +W K + +N + T+L+DM KCG M A +F ++ K D V W+A+
Sbjct: 329 GALEVGEWASKLMDMNEFLSNAVLGTALIDMYAKCGRMVSAWEIFKQMLVKKDRVIWNAV 388
Query: 557 IGGYSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFIEKNEF 736
+ G + +G K A F Q++K +KP+ T + +L AC G ++ G + + +
Sbjct: 389 LSGLAMHGYVKSAFCCFSQVEKLGIKPNGNTFIGLLCACTHAGLVDEGRKYFQSMT-HLY 447
Query: 737 SLNPFLGT--ALIDMYAKCGSMNRAWEQFKEMKNR-DSVVWNAVISGLAMTGHVKAAFGL 907
SL P + ++D+ + G ++ A + M + ++VVW A++SG + K A +
Sbjct: 448 SLEPSIEHYGCMVDLLGRAGLLDEAHSLIESMPMKANAVVWGALLSGCRLHRDTKLAEHV 507
Query: 908 FAQMEKL 928
Q+ +L
Sbjct: 508 LKQLIEL 514
>gb|EXB41949.1| hypothetical protein L484_002200 [Morus notabilis]
Length = 688
Score = 427 bits (1099), Expect = e-117
Identities = 205/359 (57%), Positives = 263/359 (73%)
Frame = +2
Query: 5 SMRNEGTLPDNFTFPFALKACALLGDHGFGMEIHGDVVKCGYEMDVFVMTSLIRLYAKCR 184
SMR +G LP+ FTFPF LKACA L D G+ IH VVK G++ DVFV TSL+ LYA+
Sbjct: 104 SMRRQGFLPNGFTFPFVLKACARLSDFQLGLRIHTHVVKVGFDCDVFVKTSLLSLYAQTG 163
Query: 185 CMKEAQRLFNEMPEPNVVAWTVIIAGYVESKGYNEALCMFTKMWHMGYRPDSYTMVRLIS 364
+ A ++F+E+PE ++V+WT II+GY+ ++EA+ MF + +G RPD Y +VR++S
Sbjct: 164 YLDRAHQVFDEIPEKSIVSWTSIISGYIGVGRFSEAVSMFRRSIEIGLRPDGYNLVRVLS 223
Query: 365 AASNLGDARNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDVVA 544
A + GD + +WI++++ + G+ N+FVATSL+DM KCG+ME AR VFD + KDVV
Sbjct: 224 ACTQSGDLSSAEWIDRYLTENGLGRNLFVATSLVDMYAKCGNMEKARIVFDGMPEKDVVC 283
Query: 545 WSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFIE 724
WS+MI GY NG KEA++LFLQM KE +KPD F +V + SACARLGALELG WA I+
Sbjct: 284 WSSMIQGYVLNGPAKEAVELFLQMLKEGLKPDCFALVGLFSACARLGALELGNWARSLID 343
Query: 725 KNEFSLNPFLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKAAFG 904
+E P LGT LIDMYAKCGS+ +AWE FKE+K +D V WNA ISGLAM GHVKAAFG
Sbjct: 344 NDEILSVPALGTTLIDMYAKCGSVVQAWEVFKELKEKDLVSWNAAISGLAMNGHVKAAFG 403
Query: 905 LFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDEGLKYFDGMSRVYSLNPRVEHYGCMVDL 1081
LF +MEK IQP+ NTF+GLL GC HAGLVDEG +YF+ M ++L P +EHYGCMVDL
Sbjct: 404 LFGKMEKSAIQPNGNTFVGLLSGCAHAGLVDEGRRYFNNMGSFFALAPSIEHYGCMVDL 462
Score = 191 bits (484), Expect = 6e-46
Identities = 97/301 (32%), Positives = 160/301 (53%)
Frame = +2
Query: 101 IHGDVVKCGYEMDVFVMTSLIRLYAKCRCMKEAQRLFNEMPEPNVVAWTVIIAGYVESKG 280
+H +++ G + D F++ R +F +PN+ W +I G V S
Sbjct: 35 VHASLLRLGLDQDNFLLNLFFRYAFDFGNTSYPLLVFRHTKQPNIYVWNTVIRGLVSSHC 94
Query: 281 YNEALCMFTKMWHMGYRPDSYTMVRLISAASNLGDARNVDWIEKHVRKMGMENNVFVATS 460
+++A+ + M G+ P+ +T ++ A + L D + I HV K+G + +VFV TS
Sbjct: 95 FDDAIDFYFSMRRQGFLPNGFTFPFVLKACARLSDFQLGLRIHTHVVKVGFDCDVFVKTS 154
Query: 461 LLDMCVKCGSMEMARSVFDRLRAKDVVAWSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPD 640
LL + + G ++ A VFD + K +V+W+++I GY G EA+ +F + + ++PD
Sbjct: 155 LLSLYAQTGYLDRAHQVFDEIPEKSIVSWTSIISGYIGVGRFSEAVSMFRRSIEIGLRPD 214
Query: 641 SFTMVAVLSACARLGALELGEWASGFIEKNEFSLNPFLGTALIDMYAKCGSMNRAWEQFK 820
+ +V VLSAC + G L EW ++ +N N F+ T+L+DMYAKCG+M +A F
Sbjct: 215 GYNLVRVLSACTQSGDLSSAEWIDRYLTENGLGRNLFVATSLVDMYAKCGNMEKARIVFD 274
Query: 821 EMKNRDSVVWNAVISGLAMTGHVKAAFGLFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDE 1000
M +D V W+++I G + G K A LF QM K G++PD +GL C G ++
Sbjct: 275 GMPEKDVVCWSSMIQGYVLNGPAKEAVELFLQMLKEGLKPDCFALVGLFSACARLGALEL 334
Query: 1001 G 1003
G
Sbjct: 335 G 335
>ref|XP_007133846.1| hypothetical protein PHAVU_011G213900g [Phaseolus vulgaris]
gi|561006846|gb|ESW05840.1| hypothetical protein
PHAVU_011G213900g [Phaseolus vulgaris]
Length = 690
Score = 425 bits (1093), Expect = e-116
Identities = 206/361 (57%), Positives = 268/361 (74%), Gaps = 1/361 (0%)
Frame = +2
Query: 2 ASMRNEGTL-PDNFTFPFALKACALLGDHGFGMEIHGDVVKCGYEMDVFVMTSLIRLYAK 178
ASMR PDNFTFPF LKACA L + G+ IH V++ G+E DVFV T L+ Y+K
Sbjct: 104 ASMRQRSAFAPDNFTFPFVLKACARLRNTHVGLTIHSLVIRTGFEKDVFVNTGLVCFYSK 163
Query: 179 CRCMKEAQRLFNEMPEPNVVAWTVIIAGYVESKGYNEALCMFTKMWHMGYRPDSYTMVRL 358
+ A+R+F+E+PE NVV+WT II GYVE EA+ +F + MG +PDS+T+VR+
Sbjct: 164 NGFLSHARRVFDEIPEKNVVSWTAIICGYVEFGYCEEAVGLFRGLLEMGVKPDSFTLVRV 223
Query: 359 ISAASNLGDARNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDV 538
+ A S GD + WI+ ++R+ G+ NVFVATSL+DM KCGSME AR VFD + +DV
Sbjct: 224 LYACSRTGDLASGRWIDGYMRETGLCGNVFVATSLVDMYTKCGSMEEARRVFDGMVERDV 283
Query: 539 VAWSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGF 718
V WSA+I GY++NG+PK+A+++F +MQ+E ++PD + MV LS CARLGALELG WA G
Sbjct: 284 VCWSALIQGYAANGMPKKALEVFFEMQRENVRPDCYAMVGFLSGCARLGALELGNWARGL 343
Query: 719 IEKNEFSLNPFLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKAA 898
++ +EF NP LGTALID YAKCG++ RA E F M+ +D VV+NAVISGLAM GHV AA
Sbjct: 344 VDGDEFLCNPVLGTALIDFYAKCGNVARAVEVFNSMRRKDCVVFNAVISGLAMCGHVGAA 403
Query: 899 FGLFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDEGLKYFDGMSRVYSLNPRVEHYGCMVD 1078
FG+F+QM K+G+QPD NTF+GLLCGCTHAGLVD+G +YF+ MS V+ + P +EHYGCMVD
Sbjct: 404 FGVFSQMGKVGMQPDGNTFVGLLCGCTHAGLVDDGRRYFNRMSCVFDVTPTIEHYGCMVD 463
Query: 1079 L 1081
L
Sbjct: 464 L 464
Score = 195 bits (495), Expect = 3e-47
Identities = 110/326 (33%), Positives = 171/326 (52%), Gaps = 3/326 (0%)
Frame = +2
Query: 35 NFTFPFALKACALLGDHGFG--MEIHGDVVKCGYEMDVFVMTSLIRLYAKCRCMKEAQRL 208
N LK C G + H +++ G D F++ +L+R R + A +
Sbjct: 12 NMNMGLELKKCLASGFRWLQEVKQCHCRLLRLGLHHDTFLINTLLRSSLNLRATQYATVV 71
Query: 209 FNEMPEPNVVAWTVIIAGYVESKGYNEALCMFTKM-WHMGYRPDSYTMVRLISAASNLGD 385
F + P PN+ + +I G V ++ ++EA+ ++ M + PD++T ++ A + L +
Sbjct: 72 FAQTPNPNIFLYNTLIRGLVSNEAFHEAVSLYASMRQRSAFAPDNFTFPFVLKACARLRN 131
Query: 386 ARNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDVVAWSAMIGG 565
I V + G E +VFV T L+ K G + AR VFD + K+VV+W+A+I G
Sbjct: 132 THVGLTIHSLVIRTGFEKDVFVNTGLVCFYSKNGFLSHARRVFDEIPEKNVVSWTAIICG 191
Query: 566 YSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFIEKNEFSLN 745
Y G +EA+ LF + + +KPDSFT+V VL AC+R G L G W G++ + N
Sbjct: 192 YVEFGYCEEAVGLFRGLLEMGVKPDSFTLVRVLYACSRTGDLASGRWIDGYMRETGLCGN 251
Query: 746 PFLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKAAFGLFAQMEK 925
F+ T+L+DMY KCGSM A F M RD V W+A+I G A G K A +F +M++
Sbjct: 252 VFVATSLVDMYTKCGSMEEARRVFDGMVERDVVCWSALIQGYAANGMPKKALEVFFEMQR 311
Query: 926 LGIQPDDNTFLGLLCGCTHAGLVDEG 1003
++PD +G L GC G ++ G
Sbjct: 312 ENVRPDCYAMVGFLSGCARLGALELG 337
>ref|XP_002526706.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223534006|gb|EEF35728.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 461
Score = 410 bits (1055), Expect = e-112
Identities = 195/342 (57%), Positives = 253/342 (73%)
Frame = +2
Query: 5 SMRNEGTLPDNFTFPFALKACALLGDHGFGMEIHGDVVKCGYEMDVFVMTSLIRLYAKCR 184
SMR +G LP+NFTFPF +KACA L D G+ +H VVK G++ ++FV TSL+ LYAKC
Sbjct: 104 SMRKKGFLPNNFTFPFVIKACARLLDFQLGIMMHTLVVKLGFDCNLFVNTSLVSLYAKCG 163
Query: 185 CMKEAQRLFNEMPEPNVVAWTVIIAGYVESKGYNEALCMFTKMWHMGYRPDSYTMVRLIS 364
+ +A ++ + +PE N+V+WT II+GY+ Y EA+ +F +M G RPDS+T+V+++S
Sbjct: 164 SIDDALKMLDLIPESNIVSWTAIISGYIGVGKYREAIDLFRRMLETGLRPDSFTIVQVLS 223
Query: 365 AASNLGDARNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDVVA 544
A +GD N +WI++++ + M NVFV TSL+D+ K G+ME AR +FD + +D+V+
Sbjct: 224 ACIQIGDLANGEWIDRYITENVMARNVFVTTSLVDLYAKHGNMEKARCLFDGMAERDIVS 283
Query: 545 WSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFIE 724
WSAMI GY+SNGLPK+A+DLF +M +KPD + MV L ACARLGALELG+W S ++
Sbjct: 284 WSAMIQGYASNGLPKDALDLFFKMLNAGLKPDHYAMVGFLCACARLGALELGDWGSNLMD 343
Query: 725 KNEFSLNPFLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKAAFG 904
+ EF N LGTALIDMYAKCGSM +AWE FK +K +D VWNA ISGLAM GH KAAFG
Sbjct: 344 RTEFFTNHVLGTALIDMYAKCGSMAKAWEVFKGIKGKDRAVWNAAISGLAMNGHEKAAFG 403
Query: 905 LFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDEGLKYFDGMSR 1030
LF QME+ GIQPD NTF+GLLCGCTHAGLVDEG KYF M R
Sbjct: 404 LFGQMERFGIQPDGNTFVGLLCGCTHAGLVDEGRKYFHSMGR 445
Score = 200 bits (509), Expect = 8e-49
Identities = 106/301 (35%), Positives = 174/301 (57%)
Frame = +2
Query: 101 IHGDVVKCGYEMDVFVMTSLIRLYAKCRCMKEAQRLFNEMPEPNVVAWTVIIAGYVESKG 280
+H +++ G++ ++ + +IR + +FN++ EP+VV + +I G V S
Sbjct: 35 VHAALLRLGFDQGSYLWSMIIRSSFDFNDTTYTRLIFNQIKEPDVVLYNTMIRGLVSSDC 94
Query: 281 YNEALCMFTKMWHMGYRPDSYTMVRLISAASNLGDARNVDWIEKHVRKMGMENNVFVATS 460
+ E++ + M G+ P+++T +I A + L D + + V K+G + N+FV TS
Sbjct: 95 FTESIEFYYSMRKKGFLPNNFTFPFVIKACARLLDFQLGIMMHTLVVKLGFDCNLFVNTS 154
Query: 461 LLDMCVKCGSMEMARSVFDRLRAKDVVAWSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPD 640
L+ + KCGS++ A + D + ++V+W+A+I GY G +EAIDLF +M + ++PD
Sbjct: 155 LVSLYAKCGSIDDALKMLDLIPESNIVSWTAIISGYIGVGKYREAIDLFRRMLETGLRPD 214
Query: 641 SFTMVAVLSACARLGALELGEWASGFIEKNEFSLNPFLGTALIDMYAKCGSMNRAWEQFK 820
SFT+V VLSAC ++G L GEW +I +N + N F+ T+L+D+YAK G+M +A F
Sbjct: 215 SFTIVQVLSACIQIGDLANGEWIDRYITENVMARNVFVTTSLVDLYAKHGNMEKARCLFD 274
Query: 821 EMKNRDSVVWNAVISGLAMTGHVKAAFGLFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDE 1000
M RD V W+A+I G A G K A LF +M G++PD +G LC C G ++
Sbjct: 275 GMAERDIVSWSAMIQGYASNGLPKDALDLFFKMLNAGLKPDHYAMVGFLCACARLGALEL 334
Query: 1001 G 1003
G
Sbjct: 335 G 335
>ref|XP_004487107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like isoform X1 [Cicer arietinum]
gi|502082246|ref|XP_004487108.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At3g08820-like isoform X2 [Cicer arietinum]
Length = 668
Score = 402 bits (1034), Expect = e-109
Identities = 195/360 (54%), Positives = 256/360 (71%)
Frame = +2
Query: 2 ASMRNEGTLPDNFTFPFALKACALLGDHGFGMEIHGDVVKCGYEMDVFVMTSLIRLYAKC 181
+SM +PDNFTFPF LKACA L G+ IH V+K G++ DVFV T+++ Y+KC
Sbjct: 94 SSMHKASLIPDNFTFPFVLKACARLNLFQLGIAIHSLVIKTGFDYDVFVKTNIVCFYSKC 153
Query: 182 RCMKEAQRLFNEMPEPNVVAWTVIIAGYVESKGYNEALCMFTKMWHMGYRPDSYTMVRLI 361
+ +A+++F+++ + NVV+WT II G +F + MG RPD + +VR++
Sbjct: 154 GFLTDARKVFDDIRDKNVVSWTAIIGGE-----------LFRGLLEMGLRPDGFVIVRVL 202
Query: 362 SAASNLGDARNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDVV 541
A + LGD + WI+ + + G+ NVFVATSL+DM KCGSME AR VFD + KDVV
Sbjct: 203 RACARLGDLESGRWIDWCMSECGLHRNVFVATSLVDMYAKCGSMEEARCVFDGMVEKDVV 262
Query: 542 AWSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFI 721
WSAMI GY+SNGLP+EA++LF +M+K ++PD + MV LSACARLGALE+G WA G +
Sbjct: 263 CWSAMIHGYASNGLPREALELFFEMRKVNVRPDCYAMVGFLSACARLGALEMGIWAKGLM 322
Query: 722 EKNEFSLNPFLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKAAF 901
+ EF NP LGT+LID+YAKCGS+ A +K MK +D VV+NAVISGLAM GHV AF
Sbjct: 323 DDEEFLSNPVLGTSLIDLYAKCGSVEEALGVYKMMKEKDRVVFNAVISGLAMYGHVGTAF 382
Query: 902 GLFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDEGLKYFDGMSRVYSLNPRVEHYGCMVDL 1081
G+F QM K GI PD+NTF+GLLCGCTHAGLVD+G +YF+ MS +S+ P +EHYGCMVDL
Sbjct: 383 GVFGQMGKCGIWPDENTFVGLLCGCTHAGLVDDGRRYFNSMSCAFSVTPTIEHYGCMVDL 442
Score = 164 bits (416), Expect = 5e-38
Identities = 96/302 (31%), Positives = 159/302 (52%), Gaps = 1/302 (0%)
Frame = +2
Query: 104 HGDVVKCGYEMDVFVMTSLIRLYAKCRCMKEAQRLFNEMPE-PNVVAWTVIIAGYVESKG 280
H +++ + D ++ ++R + + +F++ P PN + +I G V +
Sbjct: 26 HCRLLRLNLQQDNYLPNIILRSSLTLSNTQYSNLVFHKTPTYPNTFLYNTMIRGMVSNDR 85
Query: 281 YNEALCMFTKMWHMGYRPDSYTMVRLISAASNLGDARNVDWIEKHVRKMGMENNVFVATS 460
+++A+ +++ M PD++T ++ A + L + I V K G + +VFV T+
Sbjct: 86 FHDAVQLYSSMHKASLIPDNFTFPFVLKACARLNLFQLGIAIHSLVIKTGFDYDVFVKTN 145
Query: 461 LLDMCVKCGSMEMARSVFDRLRAKDVVAWSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPD 640
++ KCG + AR VFD +R K+VV+W+A+IGG +LF + + ++PD
Sbjct: 146 IVCFYSKCGFLTDARKVFDDIRDKNVVSWTAIIGG-----------ELFRGLLEMGLRPD 194
Query: 641 SFTMVAVLSACARLGALELGEWASGFIEKNEFSLNPFLGTALIDMYAKCGSMNRAWEQFK 820
F +V VL ACARLG LE G W + + N F+ T+L+DMYAKCGSM A F
Sbjct: 195 GFVIVRVLRACARLGDLESGRWIDWCMSECGLHRNVFVATSLVDMYAKCGSMEEARCVFD 254
Query: 821 EMKNRDSVVWNAVISGLAMTGHVKAAFGLFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDE 1000
M +D V W+A+I G A G + A LF +M K+ ++PD +G L C G ++
Sbjct: 255 GMVEKDVVCWSAMIHGYASNGLPREALELFFEMRKVNVRPDCYAMVGFLSACARLGALEM 314
Query: 1001 GL 1006
G+
Sbjct: 315 GI 316
>ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 678
Score = 401 bits (1031), Expect = e-109
Identities = 195/360 (54%), Positives = 256/360 (71%)
Frame = +2
Query: 2 ASMRNEGTLPDNFTFPFALKACALLGDHGFGMEIHGDVVKCGYEMDVFVMTSLIRLYAKC 181
ASM +PD+FTF F LKACA L G+ IH V K G++ DVFV T+++ Y+KC
Sbjct: 93 ASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKC 152
Query: 182 RCMKEAQRLFNEMPEPNVVAWTVIIAGYVESKGYNEALCMFTKMWHMGYRPDSYTMVRLI 361
+++A ++F++M NVV+WT +I G +E + EA+ +F + G RPD + +VR++
Sbjct: 153 GFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVL 212
Query: 362 SAASNLGDARNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDVV 541
A + LGD + WI++ +R+ G+ NVFVATSL+DM KCGSME AR VFD + KD+V
Sbjct: 213 RACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIV 272
Query: 542 AWSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFI 721
WSAMI GY+SNGLP+EAI+LF +M+K ++PD + MV LS+CA LGALELG WA G +
Sbjct: 273 CWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLM 332
Query: 722 EKNEFSLNPFLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKAAF 901
EF NP LGT+LID YAKCGSM A +K MK +D VV+NAVISGLAM G V AAF
Sbjct: 333 NYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAF 392
Query: 902 GLFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDEGLKYFDGMSRVYSLNPRVEHYGCMVDL 1081
G+F QM K GI P+++TF+GLLCGCTHAGLVD+G YF+ MS +S+ P +EHYGCMVDL
Sbjct: 393 GVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDL 452
Score = 92.0 bits (227), Expect = 4e-16
Identities = 55/179 (30%), Positives = 86/179 (48%)
Frame = +2
Query: 545 WSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFIE 724
++ MI G S A+ L+ M K + PDSFT VL ACARL LG +
Sbjct: 72 YNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVF 131
Query: 725 KNEFSLNPFLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKAAFG 904
K F + F+ T ++ Y+KCG + AW+ F +M ++ V W +I G G + A
Sbjct: 132 KTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVD 191
Query: 905 LFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDEGLKYFDGMSRVYSLNPRVEHYGCMVDL 1081
LF + + G++PD + +L C G ++ G ++ D R L+ V +VD+
Sbjct: 192 LFRGLLESGLRPDGFVIVRVLRACARLGDLESG-RWIDRCMRECGLSRNVFVATSLVDM 249
>ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330538|gb|EFH60957.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 685
Score = 398 bits (1022), Expect = e-108
Identities = 188/359 (52%), Positives = 252/359 (70%)
Frame = +2
Query: 5 SMRNEGTLPDNFTFPFALKACALLGDHGFGMEIHGDVVKCGYEMDVFVMTSLIRLYAKCR 184
S+R G FTFP LKAC + G+++H VVKCG+ DV MTSL+ +Y+
Sbjct: 101 SIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSG 160
Query: 185 CMKEAQRLFNEMPEPNVVAWTVIIAGYVESKGYNEALCMFTKMWHMGYRPDSYTMVRLIS 364
+ +A ++F E+PE +VV WT + +GY + + EA+ +F KM MG RPDSY +V+++S
Sbjct: 161 RLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLS 220
Query: 365 AASNLGDARNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDVVA 544
A ++GD + +WI KH+ +M M+ N FV T+L+++ KCG ME ARSVFD + KD+V
Sbjct: 221 ACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVT 280
Query: 545 WSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFIE 724
WS MI GY+SN PKE I+ FLQM +E +KPD F++V LS+CA LGAL+LGEW I+
Sbjct: 281 WSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLID 340
Query: 725 KNEFSLNPFLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKAAFG 904
++EF N F+ ALIDMYAKCG+M R +E FKEMK +D V+ NA ISGLA GHVK +F
Sbjct: 341 RHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFA 400
Query: 905 LFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDEGLKYFDGMSRVYSLNPRVEHYGCMVDL 1081
+F Q EKLGI PD +TFLGLLCGC HAGL+ +GL++F+ +S VY+L VEHYGCMVDL
Sbjct: 401 VFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDL 459
Score = 164 bits (416), Expect = 5e-38
Identities = 91/302 (30%), Positives = 153/302 (50%)
Frame = +2
Query: 98 EIHGDVVKCGYEMDVFVMTSLIRLYAKCRCMKEAQRLFNEMPEPNVVAWTVIIAGYVESK 277
++H ++ D F++ L++ R + LF+ PN+ + +I G+V +
Sbjct: 31 QVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLINGFVNNH 90
Query: 278 GYNEALCMFTKMWHMGYRPDSYTMVRLISAASNLGDARNVDWIEKHVRKMGMENNVFVAT 457
++E L +F + G +T ++ A + + + + V K G ++V T
Sbjct: 91 LFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMT 150
Query: 458 SLLDMCVKCGSMEMARSVFDRLRAKDVVAWSAMIGGYSSNGLPKEAIDLFLQMQKEKMKP 637
SLL + G + A VF+ + + VV W+A+ GY++ G +EAIDLF +M + ++P
Sbjct: 151 SLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRP 210
Query: 638 DSFTMVAVLSACARLGALELGEWASGFIEKNEFSLNPFLGTALIDMYAKCGSMNRAWEQF 817
DS+ +V VLSAC +G L+ GEW +E+ E N F+ T L+++YAKCG M +A F
Sbjct: 211 DSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVF 270
Query: 818 KEMKNRDSVVWNAVISGLAMTGHVKAAFGLFAQMEKLGIQPDDNTFLGLLCGCTHAGLVD 997
M +D V W+ +I G A K F QM + ++PD + +G L C G +D
Sbjct: 271 DSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALD 330
Query: 998 EG 1003
G
Sbjct: 331 LG 332
>ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing protein
At3g08820 gi|6403507|gb|AAF07847.1|AC010871_23 unknown
protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein;
90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 397 bits (1021), Expect = e-108
Identities = 188/359 (52%), Positives = 253/359 (70%)
Frame = +2
Query: 5 SMRNEGTLPDNFTFPFALKACALLGDHGFGMEIHGDVVKCGYEMDVFVMTSLIRLYAKCR 184
S+R G FTFP LKAC G+++H VVKCG+ DV MTSL+ +Y+
Sbjct: 101 SIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSG 160
Query: 185 CMKEAQRLFNEMPEPNVVAWTVIIAGYVESKGYNEALCMFTKMWHMGYRPDSYTMVRLIS 364
+ +A +LF+E+P+ +VV WT + +GY S + EA+ +F KM MG +PDSY +V+++S
Sbjct: 161 RLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLS 220
Query: 365 AASNLGDARNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDVVA 544
A ++GD + +WI K++ +M M+ N FV T+L+++ KCG ME ARSVFD + KD+V
Sbjct: 221 ACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVT 280
Query: 545 WSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFIE 724
WS MI GY+SN PKE I+LFLQM +E +KPD F++V LS+CA LGAL+LGEW I+
Sbjct: 281 WSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLID 340
Query: 725 KNEFSLNPFLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKAAFG 904
++EF N F+ ALIDMYAKCG+M R +E FKEMK +D V+ NA ISGLA GHVK +F
Sbjct: 341 RHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFA 400
Query: 905 LFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDEGLKYFDGMSRVYSLNPRVEHYGCMVDL 1081
+F Q EKLGI PD +TFLGLLCGC HAGL+ +GL++F+ +S VY+L VEHYGCMVDL
Sbjct: 401 VFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDL 459
Score = 172 bits (435), Expect = 3e-40
Identities = 95/302 (31%), Positives = 156/302 (51%)
Frame = +2
Query: 98 EIHGDVVKCGYEMDVFVMTSLIRLYAKCRCMKEAQRLFNEMPEPNVVAWTVIIAGYVESK 277
+IH ++ D F++ L++ R K + LF+ PN+ + +I G+V +
Sbjct: 31 QIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNH 90
Query: 278 GYNEALCMFTKMWHMGYRPDSYTMVRLISAASNLGDARNVDWIEKHVRKMGMENNVFVAT 457
++E L +F + G +T ++ A + + + V K G ++V T
Sbjct: 91 LFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMT 150
Query: 458 SLLDMCVKCGSMEMARSVFDRLRAKDVVAWSAMIGGYSSNGLPKEAIDLFLQMQKEKMKP 637
SLL + G + A +FD + + VV W+A+ GY+++G +EAIDLF +M + +KP
Sbjct: 151 SLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKP 210
Query: 638 DSFTMVAVLSACARLGALELGEWASGFIEKNEFSLNPFLGTALIDMYAKCGSMNRAWEQF 817
DS+ +V VLSAC +G L+ GEW ++E+ E N F+ T L+++YAKCG M +A F
Sbjct: 211 DSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVF 270
Query: 818 KEMKNRDSVVWNAVISGLAMTGHVKAAFGLFAQMEKLGIQPDDNTFLGLLCGCTHAGLVD 997
M +D V W+ +I G A K LF QM + ++PD + +G L C G +D
Sbjct: 271 DSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALD 330
Query: 998 EG 1003
G
Sbjct: 331 LG 332
>ref|XP_006418524.1| hypothetical protein EUTSA_v10002816mg [Eutrema salsugineum]
gi|557096452|gb|ESQ36960.1| hypothetical protein
EUTSA_v10002816mg [Eutrema salsugineum]
Length = 685
Score = 397 bits (1019), Expect = e-108
Identities = 187/359 (52%), Positives = 254/359 (70%)
Frame = +2
Query: 5 SMRNEGTLPDNFTFPFALKACALLGDHGFGMEIHGDVVKCGYEMDVFVMTSLIRLYAKCR 184
S R G FTFPF LKAC + G+++H VVKCG+ DV MTSL+ +Y+
Sbjct: 101 STRKHGLSLHGFTFPFVLKACTRSQNLKLGIDLHSLVVKCGFSHDVCAMTSLLSVYSGSG 160
Query: 185 CMKEAQRLFNEMPEPNVVAWTVIIAGYVESKGYNEALCMFTKMWHMGYRPDSYTMVRLIS 364
+ +A +LF+E+PE +VV+WT ++GY+ + + EA+ +F +M MG RPDSY +VR+++
Sbjct: 161 RLDDAHKLFDEIPERSVVSWTAFVSGYISAGKHREAIDLFREMVEMGVRPDSYLIVRVLT 220
Query: 365 AASNLGDARNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDVVA 544
A +GD + +WI+K V ++GM N FV T+L+++ K G ME ARSVFD + KD+V
Sbjct: 221 ACVRVGDLDSAEWIDKLVEEIGMPKNCFVCTTLVNLYAKRGKMEKARSVFDSMAEKDIVT 280
Query: 545 WSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFIE 724
WS MI GY+SN LPKE ++LFLQM +E +KPD +++V LS+CA LGAL+LGEW S I+
Sbjct: 281 WSTMIQGYASNSLPKEGVELFLQMLRENLKPDQYSIVGFLSSCASLGALDLGEWGSSLID 340
Query: 725 KNEFSLNPFLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKAAFG 904
++EF N +G ALIDMYAKCG+M R ++ FK+MK RD V+ N I+GLA GHVK +F
Sbjct: 341 RHEFLNNLVMGNALIDMYAKCGAMARGFQVFKDMKERDRVIMNTAITGLAKNGHVKLSFA 400
Query: 905 LFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDEGLKYFDGMSRVYSLNPRVEHYGCMVDL 1081
+F Q EKLGI PD TFLGLLCGC HAGL+ +GL++F+ MS +YSL VEHYGCMVDL
Sbjct: 401 VFGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRFFNAMSCIYSLKRTVEHYGCMVDL 459
Score = 159 bits (401), Expect = 3e-36
Identities = 91/301 (30%), Positives = 152/301 (50%)
Frame = +2
Query: 101 IHGDVVKCGYEMDVFVMTSLIRLYAKCRCMKEAQRLFNEMPEPNVVAWTVIIAGYVESKG 280
IH +++ D F++ L++ R + LF+ PN+ + +I G+V +
Sbjct: 32 IHASLIRHDLHHDTFLINLLLKRTLFFRQNHYSFLLFSHTQFPNIFLYDTLINGFVNNHL 91
Query: 281 YNEALCMFTKMWHMGYRPDSYTMVRLISAASNLGDARNVDWIEKHVRKMGMENNVFVATS 460
++E L +F G +T ++ A + + + + V K G ++V TS
Sbjct: 92 FHETLGLFLSTRKHGLSLHGFTFPFVLKACTRSQNLKLGIDLHSLVVKCGFSHDVCAMTS 151
Query: 461 LLDMCVKCGSMEMARSVFDRLRAKDVVAWSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPD 640
LL + G ++ A +FD + + VV+W+A + GY S G +EAIDLF +M + ++PD
Sbjct: 152 LLSVYSGSGRLDDAHKLFDEIPERSVVSWTAFVSGYISAGKHREAIDLFREMVEMGVRPD 211
Query: 641 SFTMVAVLSACARLGALELGEWASGFIEKNEFSLNPFLGTALIDMYAKCGSMNRAWEQFK 820
S+ +V VL+AC R+G L+ EW +E+ N F+ T L+++YAK G M +A F
Sbjct: 212 SYLIVRVLTACVRVGDLDSAEWIDKLVEEIGMPKNCFVCTTLVNLYAKRGKMEKARSVFD 271
Query: 821 EMKNRDSVVWNAVISGLAMTGHVKAAFGLFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDE 1000
M +D V W+ +I G A K LF QM + ++PD + +G L C G +D
Sbjct: 272 SMAEKDIVTWSTMIQGYASNSLPKEGVELFLQMLRENLKPDQYSIVGFLSSCASLGALDL 331
Query: 1001 G 1003
G
Sbjct: 332 G 332
Score = 87.0 bits (214), Expect = 1e-14
Identities = 57/214 (26%), Positives = 100/214 (46%)
Frame = +2
Query: 356 LISAASNLGDARNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKD 535
LIS AS + ++ I + + + ++ F+ LL + + +F + +
Sbjct: 19 LISIASTVNHLKH---IHASLIRHDLHHDTFLINLLLKRTLFFRQNHYSFLLFSHTQFPN 75
Query: 536 VVAWSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASG 715
+ + +I G+ +N L E + LFL +K + FT VL AC R L+LG
Sbjct: 76 IFLYDTLINGFVNNHLFHETLGLFLSTRKHGLSLHGFTFPFVLKACTRSQNLKLGIDLHS 135
Query: 716 FIEKNEFSLNPFLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKA 895
+ K FS + T+L+ +Y+ G ++ A + F E+ R V W A +SG G +
Sbjct: 136 LVVKCGFSHDVCAMTSLLSVYSGSGRLDDAHKLFDEIPERSVVSWTAFVSGYISAGKHRE 195
Query: 896 AFGLFAQMEKLGIQPDDNTFLGLLCGCTHAGLVD 997
A LF +M ++G++PD + +L C G +D
Sbjct: 196 AIDLFREMVEMGVRPDSYLIVRVLTACVRVGDLD 229
>ref|XP_006299039.1| hypothetical protein CARUB_v10015176mg [Capsella rubella]
gi|482567748|gb|EOA31937.1| hypothetical protein
CARUB_v10015176mg [Capsella rubella]
Length = 685
Score = 388 bits (997), Expect = e-105
Identities = 184/359 (51%), Positives = 251/359 (69%)
Frame = +2
Query: 5 SMRNEGTLPDNFTFPFALKACALLGDHGFGMEIHGDVVKCGYEMDVFVMTSLIRLYAKCR 184
S+R G FTFP LKAC + G+E+H VVKCGY DV MTSL+ +Y+
Sbjct: 101 SIRRHGLSLHGFTFPLVLKACTRSRNLKLGIELHSLVVKCGYYHDVSAMTSLLSIYSGSG 160
Query: 185 CMKEAQRLFNEMPEPNVVAWTVIIAGYVESKGYNEALCMFTKMWHMGYRPDSYTMVRLIS 364
+ +A ++F ++P+ +VV WT + +GY+ + Y EA+ +F KM M +PDSY +V+ +S
Sbjct: 161 RLNDAHKVFEDIPDRSVVTWTALFSGYITAGKYREAIGLFKKMVEMDVKPDSYFIVKFLS 220
Query: 365 AASNLGDARNVDWIEKHVRKMGMENNVFVATSLLDMCVKCGSMEMARSVFDRLRAKDVVA 544
A +LGD + +WI K + +MG++ N FV T+L+++ KCG ME ARS+FD + KD+V
Sbjct: 221 ACVHLGDLDSGEWIVKIMEEMGIQRNSFVRTTLVNLFAKCGKMEKARSIFDSMVEKDIVT 280
Query: 545 WSAMIGGYSSNGLPKEAIDLFLQMQKEKMKPDSFTMVAVLSACARLGALELGEWASGFIE 724
WS MI GY+SN PKE ++LFLQM +E +KPD F++V LS+CA LGAL+LGEW I+
Sbjct: 281 WSTMIQGYASNSFPKEGVELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLID 340
Query: 725 KNEFSLNPFLGTALIDMYAKCGSMNRAWEQFKEMKNRDSVVWNAVISGLAMTGHVKAAFG 904
++EF N F+ ALIDMYAKCG+M R +E FKEMK +D V+ NA ISGLA G+VK +F
Sbjct: 341 RHEFLNNLFMANALIDMYAKCGAMTRGFEVFKEMKEKDIVIMNAAISGLAKNGYVKLSFA 400
Query: 905 LFAQMEKLGIQPDDNTFLGLLCGCTHAGLVDEGLKYFDGMSRVYSLNPRVEHYGCMVDL 1081
+F Q EKLGI PD +TFLGLLCGC HAGL+ +GL++F+ +S Y+L VEHYGCMVDL
Sbjct: 401 VFGQTEKLGISPDGSTFLGLLCGCVHAGLIKDGLRFFNAISCDYALKRTVEHYGCMVDL 459
Score = 157 bits (397), Expect = 7e-36
Identities = 97/305 (31%), Positives = 155/305 (50%), Gaps = 3/305 (0%)
Frame = +2
Query: 98 EIHGDVVKCGYEMDVFVMTSLIRLYAKCRCMKEAQRLFNEMPEPNVVAWTVIIAGYVESK 277
+IH +V D F++ L++ R + + LF+ PN+ + +I G+V +
Sbjct: 31 QIHVSLVGHHLHHDTFLINLLLKRTLFFRQTRYSFLLFSHTQFPNIFLYNTLINGFVNNH 90
Query: 278 GYNEALCMFTKMWHMGYRPDSYTMVRLISAASNLGDARNVDW-IEKH--VRKMGMENNVF 448
++E L +F + G +T ++ A + +RN+ IE H V K G ++V
Sbjct: 91 LFHETLDLFVSIRRHGLSLHGFTFPLVLKACTR---SRNLKLGIELHSLVVKCGYYHDVS 147
Query: 449 VATSLLDMCVKCGSMEMARSVFDRLRAKDVVAWSAMIGGYSSNGLPKEAIDLFLQMQKEK 628
TSLL + G + A VF+ + + VV W+A+ GY + G +EAI LF +M +
Sbjct: 148 AMTSLLSIYSGSGRLNDAHKVFEDIPDRSVVTWTALFSGYITAGKYREAIGLFKKMVEMD 207
Query: 629 MKPDSFTMVAVLSACARLGALELGEWASGFIEKNEFSLNPFLGTALIDMYAKCGSMNRAW 808
+KPDS+ +V LSAC LG L+ GEW +E+ N F+ T L++++AKCG M +A
Sbjct: 208 VKPDSYFIVKFLSACVHLGDLDSGEWIVKIMEEMGIQRNSFVRTTLVNLFAKCGKMEKAR 267
Query: 809 EQFKEMKNRDSVVWNAVISGLAMTGHVKAAFGLFAQMEKLGIQPDDNTFLGLLCGCTHAG 988
F M +D V W+ +I G A K LF QM + ++PD + +G L C G
Sbjct: 268 SIFDSMVEKDIVTWSTMIQGYASNSFPKEGVELFLQMLQENLKPDQFSIVGFLSSCASLG 327
Query: 989 LVDEG 1003
+D G
Sbjct: 328 ALDLG 332