BLASTX nr result
ID: Papaver27_contig00043664
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00043664
(601 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI19452.3| unnamed protein product [Vitis vinifera] 213 3e-53
ref|XP_007216378.1| hypothetical protein PRUPE_ppa020947mg [Prun... 135 1e-29
ref|XP_004290399.1| PREDICTED: pentatricopeptide repeat-containi... 130 2e-28
ref|XP_002515711.1| pentatricopeptide repeat-containing protein,... 129 5e-28
ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 129 6e-28
ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containi... 129 6e-28
gb|EXB75175.1| hypothetical protein L484_025954 [Morus notabilis] 128 1e-27
ref|XP_006395607.1| hypothetical protein EUTSA_v10005512mg [Eutr... 128 1e-27
ref|XP_002317690.2| pentatricopeptide repeat-containing family p... 127 2e-27
gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-... 127 2e-27
ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp.... 127 2e-27
gb|ABR17838.1| unknown [Picea sitchensis] 127 2e-27
ref|XP_006359230.1| PREDICTED: pentatricopeptide repeat-containi... 127 3e-27
ref|XP_007019372.1| Pentatricopeptide repeat superfamily protein... 127 3e-27
ref|XP_002525566.1| pentatricopeptide repeat-containing protein,... 127 3e-27
ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group] g... 126 5e-27
gb|EMT00934.1| hypothetical protein F775_15202 [Aegilops tauschii] 126 5e-27
ref|XP_003608008.1| Pentatricopeptide repeat-containing protein ... 126 5e-27
gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japo... 126 5e-27
gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indi... 126 5e-27
>emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 213 bits (542), Expect = 3e-53
Identities = 104/193 (53%), Positives = 139/193 (72%)
Frame = +3
Query: 15 LEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFK 194
LE +TSI+NSLIT YSK +EVGKA +FE+L +D+++WNSM+ G++QNE +C ++FK
Sbjct: 358 LEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFK 417
Query: 195 KMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILS 374
+M+ GI+ D H+ T I A S S Y + GKEIHGYILRR GV+ SNAIL
Sbjct: 418 RMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILK 477
Query: 375 MYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLT 554
MYAK +I +AEK+F GM +D+YSWNAMMDGYS N + ED + IFLD ++ P D+++
Sbjct: 478 MYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVS 537
Query: 555 FSIVLTACGRLVS 593
SI+LT+CGRLVS
Sbjct: 538 LSILLTSCGRLVS 550
Score = 98.6 bits (244), Expect = 1e-18
Identities = 61/196 (31%), Positives = 110/196 (56%), Gaps = 2/196 (1%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
IK+ LE T++ NSL+T Y K + AS +FE++ KD+V+WN+MI +Q E L
Sbjct: 252 IKAGLEA-TNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENAL 310
Query: 183 ELFKKMLSL--GIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFT 356
LF++ML + ++ + T+ ++L+A+S L + ++ G+EIH +I R ++ V T
Sbjct: 311 GLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSA----LRCGREIHAHIFRLSL--EVDTSI 364
Query: 357 SNAILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNL 536
+N++++ Y+K ++ A ++F + +D SWN+M+ GY N + IF +
Sbjct: 365 TNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGI 424
Query: 537 PFDYLTFSIVLTACGR 584
D + +I+ A R
Sbjct: 425 EPDSHSLTIIFNAASR 440
Score = 93.2 bits (230), Expect = 5e-17
Identities = 53/190 (27%), Positives = 102/190 (53%), Gaps = 7/190 (3%)
Frame = +3
Query: 30 SISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFKKMLSL 209
S+SN+++ MY+K+ + A +F+ + +D +WN+M+ G+ +N E L +F +L
Sbjct: 470 SVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQ 529
Query: 210 GIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTT-------FTSNAI 368
G D + + +L + L S ++LGK+ H + + + NG +NA+
Sbjct: 530 GFPLDHVSLSILLTSCGRLVS----LQLGKQFHAVVAK--LFNGQDCPHQDSLLSINNAL 583
Query: 369 LSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDY 548
+SMY+K I++A ++F M KD +SW AM+ G + +G +++++F + +
Sbjct: 584 ISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQ 643
Query: 549 LTFSIVLTAC 578
+TF +L AC
Sbjct: 644 VTFLALLMAC 653
Score = 58.9 bits (141), Expect = 1e-06
Identities = 41/188 (21%), Positives = 98/188 (52%), Gaps = 4/188 (2%)
Frame = +3
Query: 30 SISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFKKMLSL 209
S + + S+++ + A +F+ P +D+++W+++I + + + LF+KM+
Sbjct: 56 SACSKFLVSQSEHERLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGE 115
Query: 210 GIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILSMYAKS 389
G++ + + LA+L + + L +++HG+ +R G+ + A ++MY++
Sbjct: 116 GLQPNGFS----LASLLKVSCSTGEIGLCRQLHGWSIRTGF--GLDSGIRAAWITMYSRC 169
Query: 390 TQIENAEKLFNGMS--EKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNL--PFDYLTF 557
+E+A+++F+ S D WN+++ Y +G + +++F + P + LT+
Sbjct: 170 GVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTE-LTY 228
Query: 558 SIVLTACG 581
+ V+ ACG
Sbjct: 229 ASVVNACG 236
>ref|XP_007216378.1| hypothetical protein PRUPE_ppa020947mg [Prunus persica]
gi|462412528|gb|EMJ17577.1| hypothetical protein
PRUPE_ppa020947mg [Prunus persica]
Length = 710
Score = 135 bits (339), Expect = 1e-29
Identities = 67/195 (34%), Positives = 119/195 (61%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
+ S LE + ++N+L+ MYSK+ +G A ++F+++ +D+++WN+MI+G+ +N P K L
Sbjct: 162 VVSGLESDIYVANALLAMYSKFGHMGLARMLFDRMLERDLISWNTMISGYVKNNNPRKAL 221
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSN 362
E+F++M G+K D T IL+A + L + +KLGKEIH Y++R++V F +N
Sbjct: 222 EVFEEMGKAGLKADGTTLLGILSACAELLA----LKLGKEIHAYVVRKSV-EIHNEFLTN 276
Query: 363 AILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPF 542
+++ MY + + +LF+G+ KD SWN M+ GY NG +S+++F +
Sbjct: 277 SLIEMYCNCKSLAYSRRLFDGVKWKDTVSWNCMIRGYEQNGDAFESLRLFCRMVMEGAEV 336
Query: 543 DYLTFSIVLTACGRL 587
D +T +L AC ++
Sbjct: 337 DEVTIITILGACDQI 351
Score = 107 bits (266), Expect = 3e-21
Identities = 59/189 (31%), Positives = 101/189 (53%)
Frame = +3
Query: 27 TSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFKKMLS 206
T +S L Y+ + +A ++F+ + K+ WN MI G+ NE K L L+++MLS
Sbjct: 69 TYLSTKLAAFYANCGRMAQAQVIFDGILLKNSFLWNFMIRGYACNECSLKALVLYREMLS 128
Query: 207 LGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILSMYAK 386
G K D+ TY +L A L V+ G+ +H ++ + + + + +NA+L+MY+K
Sbjct: 129 FGQKADNFTYPFVLKACGDL----LLVETGRRVHSEVVVSGLESDI--YVANALLAMYSK 182
Query: 387 STQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLTFSIV 566
+ A LF+ M E+D SWN M+ GY N P ++++F + + L D T +
Sbjct: 183 FGHMGLARMLFDRMLERDLISWNTMISGYVKNNNPRKALEVFEEMGKAGLKADGTTLLGI 242
Query: 567 LTACGRLVS 593
L+AC L++
Sbjct: 243 LSACAELLA 251
Score = 95.9 bits (237), Expect = 8e-18
Identities = 52/182 (28%), Positives = 97/182 (53%)
Frame = +3
Query: 33 ISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFKKMLSLG 212
++NSLI MY K + + +F+ + +KD V+WN MI G++QN + L LF +M+ G
Sbjct: 274 LTNSLIEMYCNCKSLAYSRRLFDGVKWKDTVSWNCMIRGYEQNGDAFESLRLFCRMVMEG 333
Query: 213 IKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILSMYAKST 392
+ D+ T IL A + + ++ G +H ++++ G A++ MY+K
Sbjct: 334 AEVDEVTIITILGACDQINA----LQFGMSVHSCLVKKGF--GANIIVGTALIDMYSKCG 387
Query: 393 QIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLTFSIVLT 572
+ + ++F+ + K+ +W+AM+ GY +GR E++I + + N D + VL+
Sbjct: 388 SLSCSRRVFDEIPRKNLVAWSAMISGYGAHGRGEEAISCYHELVANNFTPDEGVLTSVLS 447
Query: 573 AC 578
AC
Sbjct: 448 AC 449
>ref|XP_004290399.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Fragaria vesca subsp. vesca]
Length = 672
Score = 130 bits (328), Expect = 2e-28
Identities = 69/192 (35%), Positives = 117/192 (60%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
+K L+ + +SLI MY+K V A LVF++L +D + WNSM+T + QN PE +
Sbjct: 302 LKHGLDKSFHVGSSLIGMYAKSGRVDLAHLVFKRLSERDAICWNSMLTSYSQNGKPEDAM 361
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSN 362
+LF+ M G+K D +++AIL+ ++LP+ + GKEIHG+I++ + + F +
Sbjct: 362 DLFRHMGMGGVKYDCVSFSAILSVCANLPA----LHYGKEIHGFIIKSEFSSDI--FAQS 415
Query: 363 AILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPF 542
A++ MYAK + A +F+ M EK+ SWN+++ Y +GR +DS+ +F D + +
Sbjct: 416 ALIDMYAKCGNLVIARHVFDSMEEKNEVSWNSIISAYGYHGRLKDSLGLFRDMLDNGILP 475
Query: 543 DYLTFSIVLTAC 578
D+++F VL+AC
Sbjct: 476 DHVSFVGVLSAC 487
Score = 110 bits (275), Expect = 3e-22
Identities = 66/193 (34%), Positives = 107/193 (55%)
Frame = +3
Query: 15 LEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFK 194
LE +S++N+LI +YSK + A +F+ +P D+V WN MI+G+ QN + LF
Sbjct: 104 LESHSSVANTLIAVYSKCHILSDARKLFDMMPRTDVVRWNGMISGYIQNGFMSEASGLFD 163
Query: 195 KMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILS 374
+M+S G+K D T + + L S+ F +K KEIHGYI+R V V + +A++
Sbjct: 164 EMISAGVKPDSIT---LASFLPSVTQPFN-LKQAKEIHGYIIRHCVPFDV--YLKSALID 217
Query: 375 MYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLT 554
+Y+K ++ A +FN + D AM+ G +NG D+++IF +NL + LT
Sbjct: 218 VYSKCRSVDMARNIFNQRTRTDVVMCTAMISGLVLNGMNTDALEIFRWLLRENLRPNTLT 277
Query: 555 FSIVLTACGRLVS 593
+ +L AC L +
Sbjct: 278 MASILPACAGLAA 290
Score = 108 bits (270), Expect = 1e-21
Identities = 59/185 (31%), Positives = 106/185 (57%)
Frame = +3
Query: 33 ISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFKKMLSLG 212
+ ++LI +YSK + V A +F + D+V +MI+G N + LE+F+ +L
Sbjct: 211 LKSALIDVYSKCRSVDMARNIFNQRTRTDVVMCTAMISGLVLNGMNTDALEIFRWLLREN 270
Query: 213 IKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILSMYAKST 392
++ + T +IL A + L + +KLGKE+HG IL+ + + ++++ MYAKS
Sbjct: 271 LRPNTLTMASILPACAGLAA----LKLGKELHGNILKHGL--DKSFHVGSSLIGMYAKSG 324
Query: 393 QIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLTFSIVLT 572
+++ A +F +SE+D WN+M+ YS NG+PED++ +F + +D ++FS +L+
Sbjct: 325 RVDLAHLVFKRLSERDAICWNSMLTSYSQNGKPEDAMDLFRHMGMGGVKYDCVSFSAILS 384
Query: 573 ACGRL 587
C L
Sbjct: 385 VCANL 389
Score = 74.7 bits (182), Expect = 2e-11
Identities = 49/186 (26%), Positives = 92/186 (49%), Gaps = 2/186 (1%)
Frame = +3
Query: 18 EPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFKK 197
E + +SL+ +Y + A VF+K+ KD V+WN M+ G+ + + +F +
Sbjct: 4 EVDIYAGSSLLQLYVNNGCIRDARHVFDKMSHKDCVSWNVMLHGYAKKGEFSNAVGIFME 63
Query: 198 MLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTS--NAIL 371
M S IK + T++ +L+ +S + G ++HG + V G+ + +S N ++
Sbjct: 64 MRSSEIKANAVTFSCVLSVCAS----EAMINFGTQLHGLV----VAYGLESHSSVANTLI 115
Query: 372 SMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYL 551
++Y+K + +A KLF+ M D WN M+ GY NG ++ +F + + D +
Sbjct: 116 AVYSKCHILSDARKLFDMMPRTDVVRWNGMISGYIQNGFMSEASGLFDEMISAGVKPDSI 175
Query: 552 TFSIVL 569
T + L
Sbjct: 176 TLASFL 181
Score = 57.8 bits (138), Expect = 2e-06
Identities = 26/86 (30%), Positives = 46/86 (53%)
Frame = +3
Query: 342 VTTFTSNAILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDK 521
V + +++L +Y + I +A +F+ MS KD SWN M+ GY+ G +++ IF++
Sbjct: 5 VDIYAGSSLLQLYVNNGCIRDARHVFDKMSHKDCVSWNVMLHGYAKKGEFSNAVGIFMEM 64
Query: 522 HEKNLPFDYLTFSIVLTACGRLVSFN 599
+ + +TFS VL+ C N
Sbjct: 65 RSSEIKANAVTFSCVLSVCASEAMIN 90
>ref|XP_002515711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545148|gb|EEF46658.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 462
Score = 129 bits (325), Expect = 5e-28
Identities = 68/189 (35%), Positives = 111/189 (58%), Gaps = 2/189 (1%)
Frame = +3
Query: 33 ISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFKKMLSLG 212
+ NSL+ MYSK+ + A +VF+++P +D+ +WN+MI+G+ +N P + L +F M +G
Sbjct: 180 VGNSLLAMYSKFGNMKMARMVFDRMPVRDLTSWNTMISGYLKNGKPREVLAIFNLMKQIG 239
Query: 213 IKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYIL--RRAVLNGVTTFTSNAILSMYAK 386
+ DD T +L + L +E K GKEIHGY++ R +V N F N+++ MY K
Sbjct: 240 LSVDDMTLIGLLCTCAELFAE----KQGKEIHGYVVRNRHSVFN---HFLINSLIEMYCK 292
Query: 387 STQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLTFSIV 566
+ +A KLF M+ KD SWN+M+ GY+ N +S+++F + D +TF V
Sbjct: 293 CNSMVDARKLFEHMAWKDTVSWNSMISGYARNRDAFESLRVFCRMVLEGTKPDKITFITV 352
Query: 567 LTACGRLVS 593
L AC ++ +
Sbjct: 353 LGACEQITA 361
Score = 100 bits (249), Expect = 3e-19
Identities = 52/158 (32%), Positives = 89/158 (56%)
Frame = +3
Query: 39 NSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFKKMLSLGIK 218
NSLI MY K + A +FE + +KD V+WNSMI+G+ +N + L +F +M+ G K
Sbjct: 284 NSLIEMYCKCNSMVDARKLFEHMAWKDTVSWNSMISGYARNRDAFESLRVFCRMVLEGTK 343
Query: 219 TDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILSMYAKSTQI 398
D T+ +L A + + ++ G+ +H Y+ ++ T F + A++ MYAK +
Sbjct: 344 PDKITFITVLGACEQITA----MEFGRSVHSYLSKKGF--SATIFVATALIDMYAKCGNL 397
Query: 399 ENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIF 512
A +F M EK+ + W+AM+ GY ++G ++I +F
Sbjct: 398 ACAHLVFEEMPEKNLFCWSAMISGYGIHGMGREAISLF 435
Score = 95.9 bits (237), Expect = 8e-18
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 2/193 (1%)
Frame = +3
Query: 15 LEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFK 194
L+ T +S L Y+ + A ++F+ + K+ WN MI G+ N P K L L++
Sbjct: 73 LQNNTYLSTKLAAFYASCGLMAAAQIIFDGIVLKNSFLWNFMIRGYACNGFPVKALFLYQ 132
Query: 195 KMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNG--VTTFTSNAI 368
M S G K D TY ++ A L R V+ G +H + V+ G + + N++
Sbjct: 133 DMSSFGQKADKFTYPFVIKACGDL----RDVEFGWRVHCEV----VITGFNLDIYVGNSL 184
Query: 369 LSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDY 548
L+MY+K ++ A +F+ M +D SWN M+ GY NG+P + + IF + L D
Sbjct: 185 LAMYSKFGNMKMARMVFDRMPVRDLTSWNTMISGYLKNGKPREVLAIFNLMKQIGLSVDD 244
Query: 549 LTFSIVLTACGRL 587
+T +L C L
Sbjct: 245 MTLIGLLCTCAEL 257
>ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 129 bits (324), Expect = 6e-28
Identities = 67/192 (34%), Positives = 118/192 (61%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
IK++ E S++ +L+ Y K V +++ VF +P KD+V W++M+TG Q EK +
Sbjct: 431 IKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAM 490
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSN 362
E+F +++ G+K +++T+++++ A SS + V+ GK+IH ++ N + S+
Sbjct: 491 EVFIQLVKEGVKPNEYTFSSVINACSSSAAT---VEHGKQIHATAVKSGKSNALCV--SS 545
Query: 363 AILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPF 542
A+L+MY+K IE+AEK+F E+D SWN+M+ GY +G + ++++F + LP
Sbjct: 546 ALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPL 605
Query: 543 DYLTFSIVLTAC 578
D +TF VLTAC
Sbjct: 606 DDVTFIGVLTAC 617
Score = 94.4 bits (233), Expect = 2e-17
Identities = 51/199 (25%), Positives = 101/199 (50%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
+KS + S+ SL+ MY K ++ +F+++ K++V+W S+++G+ +N L ++ +
Sbjct: 131 LKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVI 190
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSN 362
L +M G+ + T+ +L AL+ + ++ G ++H I++ TTF N
Sbjct: 191 HLINQMQMEGVNPNGFTFATVLGALA----DESIIEGGVQVHAMIVKNGF--EFTTFVCN 244
Query: 363 AILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPF 542
A++ MY KS + +AE +F+ M +D+ +WN M+ GY+ G + ++F +
Sbjct: 245 ALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKL 304
Query: 543 DYLTFSIVLTACGRLVSFN 599
F L C + N
Sbjct: 305 SRTVFCTALKLCSQQRELN 323
Score = 79.3 bits (194), Expect = 7e-13
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 1/193 (0%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFK-DMVTWNSMITGFDQNELPEKC 179
+K+ E I +L+ YSK V +A +F ++VTW +MI GF QN +K
Sbjct: 333 VKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKA 392
Query: 180 LELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTS 359
++LF +M G++ + TY+ +LA S L ++H I+ +A V + +
Sbjct: 393 VDLFCQMSREGVRPNHFTYSTVLAGKPS--------SLLSQLHAQII-KAYYEKVPS-VA 442
Query: 360 NAILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLP 539
A+L Y K+ + + ++F + KD +W+AM+ G + E ++++F+ ++ +
Sbjct: 443 TALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVK 502
Query: 540 FDYLTFSIVLTAC 578
+ TFS V+ AC
Sbjct: 503 PNEYTFSSVINAC 515
Score = 75.9 bits (185), Expect = 8e-12
Identities = 50/191 (26%), Positives = 90/191 (47%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
IK FL P + + + S A +F++ P KD+ +N ++ F +N + L
Sbjct: 30 IKHFLHPHGFLYHQSLPFISLPSRPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREAL 89
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSN 362
LFK + S G+ D T + L L + +G+++H L+ L V+ TS
Sbjct: 90 HLFKDLHSSGLGVDGLTLSCALKVCGVLFDQV----VGRQVHCQSLKSGFLEDVSVGTS- 144
Query: 363 AILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPF 542
++ MY K+ E+ +F+ M K+ SW +++ GY+ NG ++ I + + +
Sbjct: 145 -LVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNP 203
Query: 543 DYLTFSIVLTA 575
+ TF+ VL A
Sbjct: 204 NGFTFATVLGA 214
>ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 129 bits (324), Expect = 6e-28
Identities = 67/192 (34%), Positives = 118/192 (61%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
IK++ E S++ +L+ Y K V +++ VF +P KD+V W++M+TG Q EK +
Sbjct: 431 IKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAM 490
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSN 362
E+F +++ G+K +++T+++++ A SS + V+ GK+IH ++ N + S+
Sbjct: 491 EVFIQLVKEGVKPNEYTFSSVINACSSSAAT---VEHGKQIHATAVKSGKSNALCV--SS 545
Query: 363 AILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPF 542
A+L+MY+K IE+AEK+F E+D SWN+M+ GY +G + ++++F + LP
Sbjct: 546 ALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPL 605
Query: 543 DYLTFSIVLTAC 578
D +TF VLTAC
Sbjct: 606 DDVTFIGVLTAC 617
Score = 94.4 bits (233), Expect = 2e-17
Identities = 51/199 (25%), Positives = 101/199 (50%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
+KS + S+ SL+ MY K ++ +F+++ K++V+W S+++G+ +N L ++ +
Sbjct: 131 LKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVI 190
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSN 362
L +M G+ + T+ +L AL+ + ++ G ++H I++ TTF N
Sbjct: 191 HLINQMQMEGVNPNGFTFATVLGALA----DESIIEGGVQVHAMIVKNGF--EFTTFVCN 244
Query: 363 AILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPF 542
A++ MY KS + +AE +F+ M +D+ +WN M+ GY+ G + ++F +
Sbjct: 245 ALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKL 304
Query: 543 DYLTFSIVLTACGRLVSFN 599
F L C + N
Sbjct: 305 SRTVFCTALKLCSQQRELN 323
Score = 80.9 bits (198), Expect = 3e-13
Identities = 54/193 (27%), Positives = 98/193 (50%), Gaps = 1/193 (0%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFK-DMVTWNSMITGFDQNELPEKC 179
+K+ E I +L+ YSK V +A +F ++VTW +MI GF QN EK
Sbjct: 333 VKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKA 392
Query: 180 LELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTS 359
++LF +M G++ + TY+ +LA S L ++H I+ +A V + +
Sbjct: 393 VDLFCQMSREGVRPNHFTYSTVLAGKPS--------SLLSQLHAQII-KAYYEKVPS-VA 442
Query: 360 NAILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLP 539
A+L Y K+ + + ++F + KD +W+AM+ G + E ++++F+ ++ +
Sbjct: 443 TALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVK 502
Query: 540 FDYLTFSIVLTAC 578
+ TFS V+ AC
Sbjct: 503 PNEYTFSSVINAC 515
Score = 75.9 bits (185), Expect = 8e-12
Identities = 50/191 (26%), Positives = 90/191 (47%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
IK FL P + + + S A +F++ P KD+ +N ++ F +N + L
Sbjct: 30 IKHFLHPHGFLYHQSLPFISLPSRPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREAL 89
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSN 362
LFK + S G+ D T + L L + +G+++H L+ L V+ TS
Sbjct: 90 HLFKDLHSSGLGVDGLTLSCALKVCGVLFDQV----VGRQVHCQSLKSGFLEDVSVGTS- 144
Query: 363 AILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPF 542
++ MY K+ E+ +F+ M K+ SW +++ GY+ NG ++ I + + +
Sbjct: 145 -LVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNP 203
Query: 543 DYLTFSIVLTA 575
+ TF+ VL A
Sbjct: 204 NGFTFATVLGA 214
>gb|EXB75175.1| hypothetical protein L484_025954 [Morus notabilis]
Length = 850
Score = 128 bits (321), Expect = 1e-27
Identities = 71/193 (36%), Positives = 120/193 (62%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
IK+ L+ + +S+ MY+K + A VF+++P KD V WN+MIT QN PE+ +
Sbjct: 480 IKNGLDRWCYVGSSITGMYAKCGRLDLARQVFKRIPKKDAVCWNTMITSCSQNGKPEETI 539
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSN 362
+LF +M G K D + +A L++ ++LP+ + GKEIH +++RRA ++ V F +
Sbjct: 540 DLFCQMGMEGTKYDCVSLSATLSSCANLPA----LHYGKEIHAFMIRRAFISDV--FAGS 593
Query: 363 AILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPF 542
A++ MYAK +E A K+FN M K++ SWN+++ Y +GR ++S+ +F EK +
Sbjct: 594 ALIDMYAKCGNLEFARKVFNLMLVKNDVSWNSIIAAYGNHGRLKESLALFHQMLEKGILP 653
Query: 543 DYLTFSIVLTACG 581
D++TF +++ACG
Sbjct: 654 DHVTFLGIISACG 666
Score = 99.8 bits (247), Expect = 5e-19
Identities = 57/197 (28%), Positives = 105/197 (53%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
+ S LE ++ ++N+L+ MYSK + + A +F+ +P D+VTWN MI+G+ QN +
Sbjct: 278 VNSGLELDSPVANTLLAMYSKCQHLSDAHKLFDLMPKTDLVTWNGMISGYVQNGFMIEAS 337
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSN 362
F +M+S G+K D T+ + + +++ S + GKEIHGYI+R V + F +
Sbjct: 338 NCFHEMISAGVKPDSITFASFIPSVTESAS----LHKGKEIHGYIIRHGV--PLDVFLKS 391
Query: 363 AILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPF 542
A++ +Y K + A + + D AM+ G+ +NG ++++ F + +
Sbjct: 392 ALIDLYFKCRNVAMARNILKQSTTVDVIVCTAMISGFVLNGMDTNALETFRWLLKNKMRP 451
Query: 543 DYLTFSIVLTACGRLVS 593
+ +T + VL A L +
Sbjct: 452 NSVTLASVLPAFAGLAA 468
Score = 96.3 bits (238), Expect = 6e-18
Identities = 54/187 (28%), Positives = 102/187 (54%), Gaps = 2/187 (1%)
Frame = +3
Query: 33 ISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFKKMLSLG 212
+ ++LI +Y K + V A + ++ D++ +MI+GF N + LE F+ +L
Sbjct: 389 LKSALIDLYFKCRNVAMARNILKQSTTVDVIVCTAMISGFVLNGMDTNALETFRWLLKNK 448
Query: 213 IKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTT--FTSNAILSMYAK 386
++ + T ++L A + L + +KLGKE+HG I++ NG+ + ++I MYAK
Sbjct: 449 MRPNSVTLASVLPAFAGLAA----LKLGKELHGNIIK----NGLDRWCYVGSSITGMYAK 500
Query: 387 STQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLTFSIV 566
+++ A ++F + +KD WN M+ S NG+PE++I +F + +D ++ S
Sbjct: 501 CGRLDLARQVFKRIPKKDAVCWNTMITSCSQNGKPEETIDLFCQMGMEGTKYDCVSLSAT 560
Query: 567 LTACGRL 587
L++C L
Sbjct: 561 LSSCANL 567
Score = 92.8 bits (229), Expect = 6e-17
Identities = 51/182 (28%), Positives = 99/182 (54%)
Frame = +3
Query: 15 LEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFK 194
LE + + +SLI +Y++ + A +F+K+P +D V WN M+ GF +N + +E+F
Sbjct: 181 LEVDVFVGSSLIKLYAENGFIQDARQLFDKMPHRDSVLWNVMLNGFVKNGDGKNAVEMFL 240
Query: 195 KMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILS 374
K+ +K + T+ +L+ +S + V+ G ++HG ++ + + + +N +L+
Sbjct: 241 KLRISDVKPNSVTFACMLSVCAS----EQLVRFGTQLHGLVVNSGL--ELDSPVANTLLA 294
Query: 375 MYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLT 554
MY+K + +A KLF+ M + D +WN M+ GY NG ++ F + + D +T
Sbjct: 295 MYSKCQHLSDAHKLFDLMPKTDLVTWNGMISGYVQNGFMIEASNCFHEMISAGVKPDSIT 354
Query: 555 FS 560
F+
Sbjct: 355 FA 356
Score = 81.3 bits (199), Expect = 2e-13
Identities = 50/190 (26%), Positives = 98/190 (51%), Gaps = 2/190 (1%)
Frame = +3
Query: 33 ISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFKKMLSLG 212
I ++ +Y A VF +L + WN MI F L + + L+ KML G
Sbjct: 86 IGTKILAVYVLCGSFLYAKNVFYRLDLRFASPWNWMIRWFTMMGLFDVAIMLYFKMLCYG 145
Query: 213 IKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILSMYAKST 392
D +T+ ++ A L + V+L K +H + + + V F ++++ +YA++
Sbjct: 146 TSPDKYTFPPVIKACGGLNN----VRLAKRVHSTV--KLIGLEVDVFVGSSLIKLYAENG 199
Query: 393 QIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLTFSIVLT 572
I++A +LF+ M +D+ WN M++G+ NG ++++++FL ++ + +TF+ +L+
Sbjct: 200 FIQDARQLFDKMPHRDSVLWNVMLNGFVKNGDGKNAVEMFLKLRISDVKPNSVTFACMLS 259
Query: 573 ACG--RLVSF 596
C +LV F
Sbjct: 260 VCASEQLVRF 269
>ref|XP_006395607.1| hypothetical protein EUTSA_v10005512mg [Eutrema salsugineum]
gi|557092246|gb|ESQ32893.1| hypothetical protein
EUTSA_v10005512mg [Eutrema salsugineum]
Length = 706
Score = 128 bits (321), Expect = 1e-27
Identities = 78/200 (39%), Positives = 112/200 (56%), Gaps = 3/200 (1%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLP-FKDMVTWNSMITGFDQNELPEKC 179
+K LE E ++ N+LIT Y+ V A VF+ L KD+VTWNSMI GF ++E E
Sbjct: 230 LKLGLEQEITVRNALITSYADCGSVSDAKRVFDGLRGSKDLVTWNSMIAGFSKHEQKESA 289
Query: 180 LELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTS 359
ELF KM I+TD +TYT+IL+A S E GK +HG +L++ + T S
Sbjct: 290 FELFIKMQRTWIETDVYTYTSILSACSGEEHEI----FGKSLHGLVLKKGLEQ--ITSVS 343
Query: 360 NAILSMYAK--STQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKN 533
NA++SMY + + I++A LF + KD SWN+++ G S G ED++K F +
Sbjct: 344 NALISMYIQFPTGAIKDALSLFESLESKDLVSWNSILTGLSQKGPSEDAVKFFRCLRSSD 403
Query: 534 LPFDYLTFSIVLTACGRLVS 593
+ D FS VL +C L +
Sbjct: 404 IEVDDYAFSAVLRSCSDLAT 423
Score = 118 bits (296), Expect = 1e-24
Identities = 66/195 (33%), Positives = 116/195 (59%), Gaps = 3/195 (1%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKE--VGKASLVFEKLPFKDMVTWNSMITGFDQNELPEK 176
+K LE TS+SN+LI+MY ++ + A +FE L KD+V+WNS++TG Q E
Sbjct: 332 LKKGLEQITSVSNALISMYIQFPTGAIKDALSLFESLESKDLVSWNSILTGLSQKGPSED 391
Query: 177 CLELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFT 356
++ F+ + S I+ DD+ ++A+L + S L + ++LG++IH + + F
Sbjct: 392 AVKFFRCLRSSDIEVDDYAFSAVLRSCSDLAT----LQLGQQIHALATKSSF--ETNEFV 445
Query: 357 SNAILSMYAKSTQIENAEKLFNGMSEKDN-YSWNAMMDGYSMNGRPEDSIKIFLDKHEKN 533
+++++ MY+K IENA K F +S K + +WN M+ GY+ +G + S+ +F +N
Sbjct: 446 TSSLILMYSKCGVIENARKCFEQISSKHSTVAWNTMILGYAQHGSGQVSLDLFSQMCSQN 505
Query: 534 LPFDYLTFSIVLTAC 578
+ D++TF+ +LTAC
Sbjct: 506 VKLDHVTFTAILTAC 520
Score = 78.6 bits (192), Expect = 1e-12
Identities = 42/157 (26%), Positives = 86/157 (54%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
IK + +SN ++ Y+K + A +F+++P +D V+WN+MI+G+ E
Sbjct: 27 IKCGYMADVYVSNRILDSYTKLGFLSHAHKLFDEMPERDSVSWNTMISGYTSCVRLESAW 86
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSN 362
LF M G K D ++ + +L ++ + + LG+++H +L+ + + +
Sbjct: 87 RLFTSMRRSGCKGDGYSLSRLLKGVAFA----KRLDLGQQLHSLVLKGSY--ECNLYVGS 140
Query: 363 AILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGY 473
+++ MYAK ++E+A + F +SE ++ SWNA++ G+
Sbjct: 141 SLVDMYAKCERVEDAFEAFQEISEPNSVSWNALIAGF 177
Score = 59.7 bits (143), Expect = 6e-07
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +3
Query: 6 KSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFK-DMVTWNSMITGFDQNELPEKCL 182
KS E +++SLI MYSK + A FE++ K V WN+MI G+ Q+ + L
Sbjct: 436 KSSFETNEFVTSSLILMYSKCGVIENARKCFEQISSKHSTVAWNTMILGYAQHGSGQVSL 495
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALS 260
+LF +M S +K D T+TAIL A S
Sbjct: 496 DLFSQMCSQNVKLDHVTFTAILTACS 521
>ref|XP_002317690.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550328506|gb|EEE98302.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 757
Score = 127 bits (319), Expect = 2e-27
Identities = 65/193 (33%), Positives = 121/193 (62%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
IK+ LE + + ++++ MY+K + A L+F ++ KD + WNS+IT F Q+ PE+ +
Sbjct: 391 IKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAI 450
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSN 362
LF++M G+K D T +A L+A +++P+ + GKEIHG++++ A + + F +
Sbjct: 451 YLFRQMGMEGVKYDCVTVSAALSACANIPA----LHYGKEIHGFMIKGAFESDL--FDMS 504
Query: 363 AILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPF 542
A+++MYAK ++ A +FN M EK+ +WN+++ Y +G DS+ +F + E+ +
Sbjct: 505 ALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQP 564
Query: 543 DYLTFSIVLTACG 581
D++TF +L++CG
Sbjct: 565 DHITFLTILSSCG 577
Score = 122 bits (305), Expect = 1e-25
Identities = 70/197 (35%), Positives = 117/197 (59%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
++S L+ + N+L+T+YSK +++G A +F+ +P D+V WN MI G+ QN +
Sbjct: 189 VRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDAS 248
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSN 362
LF +M+S GIK D T+T+ L +L+ S +K KEIHGYI+R V+ + + ++
Sbjct: 249 MLFNEMISAGIKPDSITFTSFLPSLAESSS----LKQIKEIHGYIVRHGVI--LDVYLNS 302
Query: 363 AILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPF 542
A++ +Y K A K+FN ++ D + AM+ GY +NG +D+++IF +K +
Sbjct: 303 ALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIP 362
Query: 543 DYLTFSIVLTACGRLVS 593
+ LTFS +L AC L +
Sbjct: 363 NALTFSSILPACAGLAA 379
Score = 99.0 bits (245), Expect = 9e-19
Identities = 54/185 (29%), Positives = 108/185 (58%)
Frame = +3
Query: 33 ISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFKKMLSLG 212
++++LI +Y K ++ A +F D+V + +MI+G+ N + + LE+F+ +L
Sbjct: 300 LNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKK 359
Query: 213 IKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILSMYAKST 392
+ + T+++IL A + L + +KLG+E+HGYI++ + +AI++MYAK
Sbjct: 360 MIPNALTFSSILPACAGLAA----IKLGRELHGYIIKNELEEKCPV--GSAIMNMYAKCG 413
Query: 393 QIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLTFSIVLT 572
+++ A +F +S KD WN+++ +S +G+PE++I +F + + +D +T S L+
Sbjct: 414 RLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALS 473
Query: 573 ACGRL 587
AC +
Sbjct: 474 ACANI 478
Score = 93.2 bits (230), Expect = 5e-17
Identities = 54/179 (30%), Positives = 94/179 (52%)
Frame = +3
Query: 33 ISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFKKMLSLG 212
+++SLI +Y+ + A F+K+ KD V WN MI G+ Q + ++LFK M+S
Sbjct: 98 VASSLIKLYADNGCIEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSE 157
Query: 213 IKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILSMYAKST 392
K D T+ +L S+ V+ G+++HG ++R + N ++++Y+K
Sbjct: 158 AKPDSVTFACVL----SISCSEAMVEYGRQLHGLVVRSGL--DFVPLVGNTLVTVYSKGR 211
Query: 393 QIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLTFSIVL 569
Q+ +A KLF+ M + D WN M+ GY NG +D+ +F + + D +TF+ L
Sbjct: 212 QLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFL 270
Score = 79.3 bits (194), Expect = 7e-13
Identities = 51/176 (28%), Positives = 87/176 (49%)
Frame = +3
Query: 45 LITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFKKMLSLGIKTD 224
++ MY A +F +L F + WN MI G + + L + KML G+ D
Sbjct: 1 MLGMYVLCNSFVDAKKLFYQLEFYYAMPWNWMIRGLVKLGCFDFALLFYFKMLGCGVFPD 60
Query: 225 DHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILSMYAKSTQIEN 404
+T+ ++ + L + V+LGK I IL + F +++++ +YA + IE+
Sbjct: 61 KYTFPPVIKCCTGLNN----VRLGKVIQDMILEMGF--DLDMFVASSLIKLYADNGCIED 114
Query: 405 AEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLTFSIVLT 572
A + F+ M +KD WN M++GY G + +IK+F D D +TF+ VL+
Sbjct: 115 ARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLS 170
>gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 127 bits (319), Expect = 2e-27
Identities = 67/192 (34%), Positives = 119/192 (61%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
I++ LE ++ + SL+++Y E+ A ++F+ + K +V+WN+M+ G+ QN PE+ L
Sbjct: 521 IRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERAL 580
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSN 362
LF++M+ G++ + + ++ A S LPS ++LG+E HGY L+ + + F +
Sbjct: 581 SLFRQMVLYGVQPCEISMMSVFGACSLLPS----LRLGREAHGYALKCLLEDNA--FIAC 634
Query: 363 AILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPF 542
+++ MYAK+ + + K+FNG+ E+ SWNAM+ GY ++GR +++IK+F +
Sbjct: 635 SVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCP 694
Query: 543 DYLTFSIVLTAC 578
D LTF VLTAC
Sbjct: 695 DELTFLGVLTAC 706
Score = 97.1 bits (240), Expect = 3e-18
Identities = 53/169 (31%), Positives = 93/169 (55%)
Frame = +3
Query: 6 KSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLE 185
+ F+ ++N+ + Y+K + A VF + K + +WN++I G+ Q+ P L+
Sbjct: 421 QEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLD 480
Query: 186 LFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNA 365
+ +M S G+ D T ++L+A S + S +KLGKE+HG I+R + +F +
Sbjct: 481 AYFQMKSSGLLPDLFTVCSLLSACSQIKS----LKLGKEVHGLIIRNRLER--DSFVYIS 534
Query: 366 ILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIF 512
+LS+Y ++ A LF+ M +K SWN M++GY NG PE ++ +F
Sbjct: 535 LLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLF 583
Score = 90.5 bits (223), Expect = 3e-16
Identities = 57/195 (29%), Positives = 104/195 (53%), Gaps = 5/195 (2%)
Frame = +3
Query: 15 LEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFK 194
L + + +ITMYS + VF+ L K++ WN++I+ + +NEL LE+F
Sbjct: 113 LSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFV 172
Query: 195 KMLS-LGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAIL 371
KM++ G+ D+ T+ ++ A + + V++G +HG +++ ++ V F SNA++
Sbjct: 173 KMITESGLLPDNFTFPCVVKACAGVSE----VQVGLAVHGLVVKTRLVEDV--FVSNALV 226
Query: 372 SMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKN--LPF- 542
S Y + + +A ++F M E++ SWN+M+ +S NG E+ + EK+ + F
Sbjct: 227 SFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFT 286
Query: 543 -DYLTFSIVLTACGR 584
D T + VL C R
Sbjct: 287 PDVATLATVLPVCAR 301
Score = 87.0 bits (214), Expect = 4e-15
Identities = 52/164 (31%), Positives = 91/164 (55%), Gaps = 3/164 (1%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
+K+ L + +SN+L++ Y V A VF+ +P +++V+WNSMI F N L E+C
Sbjct: 211 VKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECF 270
Query: 183 ELFKKMLSLGIKTDDHTYT---AILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTF 353
L +M+ K D+ +T A LA + + + R + +GK +HG ++ ++ V
Sbjct: 271 LLLGQMME---KDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVV-- 325
Query: 354 TSNAILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNG 485
+NA++ MY+K I +A+ +F + K+ SWN M+ G+S G
Sbjct: 326 VNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAG 369
Score = 87.0 bits (214), Expect = 4e-15
Identities = 58/201 (28%), Positives = 104/201 (51%), Gaps = 4/201 (1%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
+K L+ E ++N+L+ MYSK + A ++F+ K++V+WN+M+ GF K
Sbjct: 316 MKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTF 375
Query: 183 ELFKKMLSLG--IKTDDHTYTAILAALSSLPSEFRYVKLG--KEIHGYILRRAVLNGVTT 350
+L ++ML+ G ++ D+ T L+++P F L KE+H Y L++ ++
Sbjct: 376 DLLRQMLAGGGDLRADEVTI------LNAVPVCFEESVLPNLKELHCYSLKQEFVHN-NE 428
Query: 351 FTSNAILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEK 530
+NA ++ YAK + A ++F + K SWNA++ GYS + P S+ +
Sbjct: 429 LVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSS 488
Query: 531 NLPFDYLTFSIVLTACGRLVS 593
L D T +L+AC ++ S
Sbjct: 489 GLLPDLFTVCSLLSACSQIKS 509
>ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322779|gb|EFH53200.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 652
Score = 127 bits (319), Expect = 2e-27
Identities = 71/195 (36%), Positives = 120/195 (61%), Gaps = 3/195 (1%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKE--VGKASLVFEKLPFKDMVTWNSMITGFDQNELPEK 176
IK LE TS+SN+LI+MY ++ + A +FE L KD+V+WNS++TGF QN L E
Sbjct: 278 IKKGLEQVTSVSNALISMYIQFPTGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSED 337
Query: 177 CLELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFT 356
++ F+ + S I+ DD+ ++A+L + S L + ++LG++ H + + + F
Sbjct: 338 AVKFFRYLRSSNIEVDDYAFSAVLRSCSDLAT----LQLGQQTHALATKSSFES--NEFV 391
Query: 357 SNAILSMYAKSTQIENAEKLFNGMSEKDN-YSWNAMMDGYSMNGRPEDSIKIFLDKHEKN 533
+++++ MY+K IENA K F +S K N +WNAM+ GY+ +G + S+ +F +N
Sbjct: 392 TSSLILMYSKCGVIENARKCFEQISSKHNTIAWNAMILGYAQHGSGQVSLDLFSQMCNQN 451
Query: 534 LPFDYLTFSIVLTAC 578
+ D++TF+ +LTAC
Sbjct: 452 VKLDHVTFTAILTAC 466
Score = 120 bits (302), Expect = 2e-25
Identities = 72/200 (36%), Positives = 112/200 (56%), Gaps = 3/200 (1%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLP-FKDMVTWNSMITGFDQNELPEKC 179
+K LE E +I N++I+ Y+ V A VF+ L KD+++WNSMI G ++E E
Sbjct: 176 LKLGLEHEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESA 235
Query: 180 LELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTS 359
ELF +M I+TD +TYT I++A S + GK +HG ++++ + T S
Sbjct: 236 FELFTEMHRNWIETDIYTYTGIVSACSGEEHQ----SFGKSLHGLVIKKGLEQ--VTSVS 289
Query: 360 NAILSMYAK--STQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKN 533
NA++SMY + + +++A LF + KD SWN++M G+S NG ED++K F N
Sbjct: 290 NALISMYIQFPTGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSN 349
Query: 534 LPFDYLTFSIVLTACGRLVS 593
+ D FS VL +C L +
Sbjct: 350 IEVDDYAFSAVLRSCSDLAT 369
Score = 84.0 bits (206), Expect = 3e-14
Identities = 52/194 (26%), Positives = 101/194 (52%), Gaps = 2/194 (1%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
+K E + +SL+ MY+K + V A F ++ + V+WN++I GF Q +
Sbjct: 74 VKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIAGFVQVRDTKTAF 133
Query: 183 ELFKKM-LSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTS 359
L M + + DD T+ +L L + + L K++H +L+ + + +T
Sbjct: 134 WLLGLMEMKAAVTMDDGTFAPLLTLL----DDPMFCNLLKQVHAKVLKLGLEHEIT--IC 187
Query: 360 NAILSMYAKSTQIENAEKLFNGM-SEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNL 536
NA++S YA + +A+++F+G+ KD SWN+M+ G S + + E + ++F + H +
Sbjct: 188 NAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFTEMHRNWI 247
Query: 537 PFDYLTFSIVLTAC 578
D T++ +++AC
Sbjct: 248 ETDIYTYTGIVSAC 261
Score = 67.0 bits (162), Expect = 4e-09
Identities = 35/127 (27%), Positives = 72/127 (56%)
Frame = +3
Query: 93 VFEKLPFKDMVTWNSMITGFDQNELPEKCLELFKKMLSLGIKTDDHTYTAILAALSSLPS 272
+F+++P +D V+WN+MI+G+ E LF M G D ++++ +L ++S
Sbjct: 3 LFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASA-- 60
Query: 273 EFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILSMYAKSTQIENAEKLFNGMSEKDNYSW 452
+ LG+++HG +++ V + ++++ MYAK ++E+A F + E ++ SW
Sbjct: 61 --KRFDLGEQVHGLVVKGGYECNV--YVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSW 116
Query: 453 NAMMDGY 473
NA++ G+
Sbjct: 117 NALIAGF 123
Score = 58.5 bits (140), Expect = 1e-06
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +3
Query: 6 KSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFK-DMVTWNSMITGFDQNELPEKCL 182
KS E +++SLI MYSK + A FE++ K + + WN+MI G+ Q+ + L
Sbjct: 382 KSSFESNEFVTSSLILMYSKCGVIENARKCFEQISSKHNTIAWNAMILGYAQHGSGQVSL 441
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALS 260
+LF +M + +K D T+TAIL A S
Sbjct: 442 DLFSQMCNQNVKLDHVTFTAILTACS 467
>gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 127 bits (319), Expect = 2e-27
Identities = 66/192 (34%), Positives = 108/192 (56%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
I+S E + N+L+ MY+K V A +FE++P K++V WN++I+G+ Q+ P + L
Sbjct: 349 IRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEAL 408
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSN 362
LF +M + GIK D ++L A + F ++ GK+IHGY +R + V T
Sbjct: 409 ALFIEMQAQGIKPDSFAIVSVLPAC----AHFLALEQGKQIHGYTIRSGFESNVVVGT-- 462
Query: 363 AILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPF 542
++ +YAK + A+KLF M E+D SW M+ Y ++G ED++ +F E
Sbjct: 463 GLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKL 522
Query: 543 DYLTFSIVLTAC 578
D++ F+ +LTAC
Sbjct: 523 DHIAFTAILTAC 534
Score = 119 bits (299), Expect = 5e-25
Identities = 61/197 (30%), Positives = 110/197 (55%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
I+S +E + + N L+ MY+K V A +FE++P +D+ +WN++I G+ N + L
Sbjct: 248 IRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEAL 307
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSN 362
F +M GIK + T ++L A + L + ++ G++IHGY +R + N
Sbjct: 308 AFFNRMQVRGIKPNSITMVSVLPACAHLFA----LEQGQQIHGYAIRSGFES--NDVVGN 361
Query: 363 AILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPF 542
A+++MYAK + +A KLF M +K+ +WNA++ GYS +G P +++ +F++ + +
Sbjct: 362 ALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKP 421
Query: 543 DYLTFSIVLTACGRLVS 593
D VL AC ++
Sbjct: 422 DSFAIVSVLPACAHFLA 438
Score = 111 bits (278), Expect = 1e-22
Identities = 60/190 (31%), Positives = 105/190 (55%)
Frame = +3
Query: 18 EPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFKK 197
E + + +L +MY+K + A VF+++P +D+V+WN++I G+ QN P + L LF +
Sbjct: 152 ESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSE 211
Query: 198 MLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILSM 377
M GIK + T +++ + L + ++ GK+IH Y +R + + V N +++M
Sbjct: 212 MQVNGIKPNSSTLVSVMPVCAHLLA----LEQGKQIHCYAIRSGIESDV--LVVNGLVNM 265
Query: 378 YAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLTF 557
YAK + A KLF M +D SWNA++ GYS+N + +++ F + + + +T
Sbjct: 266 YAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITM 325
Query: 558 SIVLTACGRL 587
VL AC L
Sbjct: 326 VSVLPACAHL 335
Score = 82.0 bits (201), Expect = 1e-13
Identities = 46/157 (29%), Positives = 81/157 (51%)
Frame = +3
Query: 123 VTWNSMITGFDQNELPEKCLELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKE 302
V W I G+ +N K L L+ +M GI D + +++ A S ++ G++
Sbjct: 86 VVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSD----LQAGRK 141
Query: 303 IHGYILRRAVLNGVTTFTSNAILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMN 482
+H I+ R + V T A+ SMY K +ENA ++F+ M ++D SWNA++ GYS N
Sbjct: 142 VHEDIIARGFESDVIVGT--ALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQN 199
Query: 483 GRPEDSIKIFLDKHEKNLPFDYLTFSIVLTACGRLVS 593
G+P +++ +F + + + T V+ C L++
Sbjct: 200 GQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLA 236
Score = 58.9 bits (141), Expect = 1e-06
Identities = 31/86 (36%), Positives = 46/86 (53%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
I+S E + L+ +Y+K V A +FE++P +D+V+W +MI + + E L
Sbjct: 450 IRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDAL 509
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALS 260
LF KM G K D +TAIL A S
Sbjct: 510 ALFSKMQETGTKLDHIAFTAILTACS 535
>ref|XP_006359230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Solanum tuberosum]
Length = 680
Score = 127 bits (318), Expect = 3e-27
Identities = 66/179 (36%), Positives = 113/179 (63%)
Frame = +3
Query: 42 SLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFKKMLSLGIKT 221
+++T Y + V A +F+++ K MVTWN+MI+G+ +N E ++L KKM+ LGIK
Sbjct: 247 AIVTGYMRSGNVEMAEKMFQEMEEKSMVTWNTMISGYIENGRAEDGMKLVKKMMGLGIKV 306
Query: 222 DDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILSMYAKSTQIE 401
+D T +++L S+L + +KLGK++H ++++ + +T TS ++SMY+K +E
Sbjct: 307 NDSTLSSLLLGCSNLSA----LKLGKQVHQHVVKSPLYVDMTVGTS--LISMYSKCGVLE 360
Query: 402 NAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLTFSIVLTAC 578
+A KLF M KD +WNAM+ GY+ +G E ++ +F + K + D++TF VL+AC
Sbjct: 361 DAWKLFREMPRKDVVTWNAMISGYAQHGESEKALNLFDEMRRKGIKPDWITFVGVLSAC 419
Score = 93.2 bits (230), Expect = 5e-17
Identities = 61/191 (31%), Positives = 98/191 (51%), Gaps = 1/191 (0%)
Frame = +3
Query: 18 EPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFKK 197
EP N+++ Y + ++ A F+++P KD+ +WN+MI+GF QN L + ELF+
Sbjct: 146 EPNVVSYNTMLACYWRNADIQAAKSFFDQMPDKDVASWNTMISGFSQNGLMGEAEELFRV 205
Query: 198 MLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGK-EIHGYILRRAVLNGVTTFTSNAILS 374
M ++ T+ A++A YV+ G+ E + + A + GV T AI++
Sbjct: 206 MPV----RNEVTWNAMVAG---------YVESGELESALELFKEAPVKGVIAKT--AIVT 250
Query: 375 MYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLT 554
Y +S +E AEK+F M EK +WN M+ GY NGR ED +K+ + + T
Sbjct: 251 GYMRSGNVEMAEKMFQEMEEKSMVTWNTMISGYIENGRAEDGMKLVKKMMGLGIKVNDST 310
Query: 555 FSIVLTACGRL 587
S +L C L
Sbjct: 311 LSSLLLGCSNL 321
Score = 68.2 bits (165), Expect = 2e-09
Identities = 36/84 (42%), Positives = 54/84 (64%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
+KS L + ++ SLI+MYSK + A +F ++P KD+VTWN+MI+G+ Q+ EK L
Sbjct: 335 VKSPLYVDMTVGTSLISMYSKCGVLEDAWKLFREMPRKDVVTWNAMISGYAQHGESEKAL 394
Query: 183 ELFKKMLSLGIKTDDHTYTAILAA 254
LF +M GIK D T+ +L+A
Sbjct: 395 NLFDEMRRKGIKPDWITFVGVLSA 418
>ref|XP_007019372.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508724700|gb|EOY16597.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 578
Score = 127 bits (318), Expect = 3e-27
Identities = 65/180 (36%), Positives = 113/180 (62%)
Frame = +3
Query: 39 NSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFKKMLSLGIK 218
+S+I+ Y K +V +A +F+++P +++V WNS+I+G+ QN EK LE+F+KM S G +
Sbjct: 237 SSMISGYCKRGDVKEARNIFDRIPVRNLVNWNSLISGYAQNGFCEKALEMFRKMQSEGFE 296
Query: 219 TDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILSMYAKSTQI 398
D+ T T+IL+A + L + +GKEIH I + ++ V F NA+L MYAK +
Sbjct: 297 PDEVTITSILSACAQLGE----LDVGKEIHYLIKEKGIV--VNQFVLNALLDMYAKCGDL 350
Query: 399 ENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLTFSIVLTAC 578
+A +F GMS + + WN+M+ G++++G+ ++++ F + N D +TF +L+AC
Sbjct: 351 AHARLIFEGMSRRTSACWNSMISGFALHGQSSEALEYFRRMEQSNEMPDEITFLSLLSAC 410
Score = 75.9 bits (185), Expect = 8e-12
Identities = 48/218 (22%), Positives = 111/218 (50%), Gaps = 23/218 (10%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
IK+ + + ++SL+ MYSK + + VF+++P +++VTWN+MI G+ +N + L
Sbjct: 98 IKAGVAFDLHTASSLLNMYSKCGNLIDSRKVFDEMPERNVVTWNAMIGGYLKNGDTKSAL 157
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALS----SLPSEFRYVKLGKEIHGYILRRAVLNGVTT 350
+LF+ +L + + T+ ++ + +L + + K+ E+ + +++G T
Sbjct: 158 DLFENIL---VGRNSVTWIEMINGFAKNGDTLKARRFFDKVPLELRNVVTWTVMVDGYTA 214
Query: 351 -------------------FTSNAILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGY 473
+ ++++S Y K ++ A +F+ + ++ +WN+++ GY
Sbjct: 215 NGELEAARELFEMMPEKNFYVWSSMISGYCKRGDVKEARNIFDRIPVRNLVNWNSLISGY 274
Query: 474 SMNGRPEDSIKIFLDKHEKNLPFDYLTFSIVLTACGRL 587
+ NG E ++++F + D +T + +L+AC +L
Sbjct: 275 AQNGFCEKALEMFRKMQSEGFEPDEVTITSILSACAQL 312
>ref|XP_002525566.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535145|gb|EEF36825.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 563
Score = 127 bits (318), Expect = 3e-27
Identities = 71/188 (37%), Positives = 111/188 (59%)
Frame = +3
Query: 15 LEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFK 194
L+ S+ NSLI+MYSK K+V A+ +FE L + +V+WN+MI G+ QN + L F
Sbjct: 375 LDSNVSVMNSLISMYSKCKQVDFAANLFENLQNRTLVSWNAMILGYAQNGRLNEALNFFC 434
Query: 195 KMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILS 374
+M S IK D T +++ AL +E + K IHG ++RR L T F A++
Sbjct: 435 EMQSQNIKPDSFTMVSVIPAL----AELSIPRQAKWIHGLVIRR--LLDDTVFVMTALVD 488
Query: 375 MYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLT 554
MYAK I A KLFN MSE+ +WN+M+D Y +G ++++++F++ + + + +T
Sbjct: 489 MYAKCGAIHTARKLFNMMSERHVITWNSMIDAYGTHGLGKEAVQLFVEMQKGTIKPNDVT 548
Query: 555 FSIVLTAC 578
F VL+AC
Sbjct: 549 FLCVLSAC 556
Score = 107 bits (268), Expect = 2e-21
Identities = 61/186 (32%), Positives = 102/186 (54%)
Frame = +3
Query: 30 SISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFKKMLSL 209
+IS +L+ MYSK +G A ++F+ + + +VTWNSMI G +N PE+ LFKKM+
Sbjct: 279 NISTALVDMYSKCDSLGTARVIFDGMGSRTVVTWNSMIAGCVENGDPEEAKVLFKKMMDE 338
Query: 210 GIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILSMYAKS 389
G++ D T +L A + ++ GK +H + + + V+ N+++SMY+K
Sbjct: 339 GLQPTDVTVMEVLHACADSGD----LEQGKFVHKLVEDLKLDSNVSVM--NSLISMYSKC 392
Query: 390 TQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLTFSIVL 569
Q++ A LF + + SWNAM+ GY+ NGR +++ F + +N+ D T V+
Sbjct: 393 KQVDFAANLFENLQNRTLVSWNAMILGYAQNGRLNEALNFFCEMQSQNIKPDSFTMVSVI 452
Query: 570 TACGRL 587
A L
Sbjct: 453 PALAEL 458
Score = 99.0 bits (245), Expect = 9e-19
Identities = 55/179 (30%), Positives = 102/179 (56%)
Frame = +3
Query: 42 SLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFKKMLSLGIKT 221
+++++Y K + +G A +F+++ +D+V WN++I+G+ QN L + LEL K+ G +
Sbjct: 182 AVVSLYCKCRVIGDAYKMFDRMTERDLVCWNTIISGYAQNGLTKVALELVPKIFEEGHRP 241
Query: 222 DDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILSMYAKSTQIE 401
D T ++L A+ ++ R ++ GK IH Y++ RA + + S A++ MY+K +
Sbjct: 242 DSVTIVSVLPAV----ADIRSLRFGKAIHAYVI-RAGFDWLVNI-STALVDMYSKCDSLG 295
Query: 402 NAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLTFSIVLTAC 578
A +F+GM + +WN+M+ G NG PE++ +F ++ L +T VL AC
Sbjct: 296 TARVIFDGMGSRTVVTWNSMIAGCVENGDPEEAKVLFKKMMDEGLQPTDVTVMEVLHAC 354
Score = 75.5 bits (184), Expect = 1e-11
Identities = 51/191 (26%), Positives = 95/191 (49%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
IK+ E LI+++ Y + +A+ VFE + K +++M+ GF +N + L
Sbjct: 68 IKNGFYSEELFQTKLISLFCNYGSLTEAARVFEPIENKLEALYHTMLKGFAKNSSLDSAL 127
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSN 362
F +M ++ + +T +L +L + ++ GKEIHG ++ F
Sbjct: 128 LFFCRMKHDNVRPVVYNFTYLL----TLCGDNFDLRRGKEIHGQLITSGF--SWNLFAMT 181
Query: 363 AILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPF 542
A++S+Y K I +A K+F+ M+E+D WN ++ GY+ NG + ++++ E+
Sbjct: 182 AVVSLYCKCRVIGDAYKMFDRMTERDLVCWNTIISGYAQNGLTKVALELVPKIFEEGHRP 241
Query: 543 DYLTFSIVLTA 575
D +T VL A
Sbjct: 242 DSVTIVSVLPA 252
>ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|27260973|dbj|BAC45090.1| selenium-binding
protein-like [Oryza sativa Japonica Group]
gi|40253357|dbj|BAD05289.1| selenium-binding
protein-like [Oryza sativa Japonica Group]
gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa
Japonica Group] gi|215715200|dbj|BAG94951.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 696
Score = 126 bits (316), Expect = 5e-27
Identities = 68/195 (34%), Positives = 115/195 (58%), Gaps = 3/195 (1%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKE---VGKASLVFEKLPFKDMVTWNSMITGFDQNELPE 173
IKS LE T + N+LI MY++Y E + A F L KD V+WNSM+TG+ Q+ L
Sbjct: 324 IKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSA 383
Query: 174 KCLELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTF 353
L+ F+ M S ++TD++ ++A L + SE ++LGK+IHG ++ + F
Sbjct: 384 DALKFFRCMCSENVRTDEYAFSAALRS----SSELAVLQLGKQIHGLVIHSGFASN--DF 437
Query: 354 TSNAILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKN 533
S++++ MY+KS I++A K F + + WNAM+ GY+ +G+ E+ +F + ++
Sbjct: 438 VSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRK 497
Query: 534 LPFDYLTFSIVLTAC 578
P D++TF ++T+C
Sbjct: 498 APLDHITFVGLITSC 512
Score = 94.4 bits (233), Expect = 2e-17
Identities = 55/194 (28%), Positives = 112/194 (57%), Gaps = 2/194 (1%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
+KS L +++L+ +Y+K V A VF+ +P ++ V+WN++I G+ ++ L
Sbjct: 120 LKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASAL 179
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSN 362
ELF +M G+ D+ T+ ++L A+ PS F L ++HG I++ G+T N
Sbjct: 180 ELFLEMEREGLAPDEATFASLLTAVEG-PSCF----LMHQLHGKIVKYGSALGLTVL--N 232
Query: 363 AILSMYAKSTQIENAEKLFNGMSE-KDNYSWNAMMDGYSMNGRPEDSIKIFLD-KHEKNL 536
A ++ Y++ ++++ ++F+G+ + +D SWNAM+ Y+ NG ++++K F+ E +
Sbjct: 233 AAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGV 292
Query: 537 PFDYLTFSIVLTAC 578
D +F+ ++++C
Sbjct: 293 HPDMYSFTSIISSC 306
Score = 94.4 bits (233), Expect = 2e-17
Identities = 55/191 (28%), Positives = 107/191 (56%), Gaps = 5/191 (2%)
Frame = +3
Query: 30 SISNSLITMYSKYKEVGKASLVFEKL-PFKDMVTWNSMITGFDQNELPEKCLELFKKMLS 206
++ N+ IT YS+ + + +F+ + +D+++WN+M+ + N + ++ ++ F +M+
Sbjct: 229 TVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQ 288
Query: 207 -LGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILSMYA 383
G+ D +++T+I+++ S + G+ IHG +++ A L GVT NA+++MY
Sbjct: 289 ESGVHPDMYSFTSIISSCSEHGHDDHQ---GRVIHGLVIKSA-LEGVTP-VCNALIAMYT 343
Query: 384 KSTQ---IENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLT 554
+ + +E+A K FN + KD SWN+M+ GYS +G D++K F +N+ D
Sbjct: 344 RYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYA 403
Query: 555 FSIVLTACGRL 587
FS L + L
Sbjct: 404 FSAALRSSSEL 414
Score = 88.6 bits (218), Expect = 1e-15
Identities = 52/183 (28%), Positives = 103/183 (56%), Gaps = 4/183 (2%)
Frame = +3
Query: 39 NSLITMYSKYKEVGKASL--VFEKLPFKDMVTWNSMITGFDQNELPEKCLELFKKMLSLG 212
N L+T YS+ G A+ VF+++P +D V+WN+++ + + L + M + G
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQG 88
Query: 213 IKTDDHTYTAIL--AALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILSMYAK 386
+ ++ + L AA++ P+ +G ++ L+ + N V F ++A+L +YAK
Sbjct: 89 LASNTFALGSALRSAAVARRPA------IGAQLQSLALKSGLANNV--FAASALLDVYAK 140
Query: 387 STQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLTFSIV 566
++ +A ++F+GM E++ SWNA++ GY+ +G ++++FL+ + L D TF+ +
Sbjct: 141 CGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASL 200
Query: 567 LTA 575
LTA
Sbjct: 201 LTA 203
>gb|EMT00934.1| hypothetical protein F775_15202 [Aegilops tauschii]
Length = 731
Score = 126 bits (316), Expect = 5e-27
Identities = 66/192 (34%), Positives = 113/192 (58%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
+K+ E + ++L+ MY+K + + +F K+ KD VTWNSMI+ F QN PE+ L
Sbjct: 356 LKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKMSAKDEVTWNSMISSFAQNGEPEEAL 415
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSN 362
ELF++M G+K + T ++IL+A + LP+ + GKEIHG I++ + V F +
Sbjct: 416 ELFRQMSMEGVKYSNVTISSILSACAGLPA----IYYGKEIHGIIIKGPIRADV--FAES 469
Query: 363 AILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPF 542
A++ MY K +E A ++F M EK+ +WN+++ Y +G E+S+ + E+
Sbjct: 470 ALIDMYGKCGNLELAFRVFEFMPEKNEVTWNSIISAYGAHGLVEESVSLLCRMQEEGFNA 529
Query: 543 DYLTFSIVLTAC 578
D++TF +++AC
Sbjct: 530 DHVTFLALISAC 541
Score = 110 bits (274), Expect = 4e-22
Identities = 65/192 (33%), Positives = 106/192 (55%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
+K LEPE +++N+L++MY+K + + A +F+ +P D+VTWN MI+G QN L + L
Sbjct: 154 VKYGLEPEVAVANTLVSMYAKCQCLDDAWRLFDLMPRDDLVTWNGMISGCVQNGLVDDAL 213
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSN 362
LF M G++ D T ++L AL+ L K GKEIHGYI+R V + F +
Sbjct: 214 RLFCDMQKSGLQPDSVTLASLLPALTDLNG----FKQGKEIHGYIVRNCV--HLDVFLVS 267
Query: 363 AILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPF 542
A++ +Y K + A+ +F+ D + M+ GY +NG E ++K+F E +
Sbjct: 268 ALVDIYFKCRDVRMAQNVFDATKTIDVVIGSTMISGYVLNGMSEAAVKMFRYLLEVGIKP 327
Query: 543 DYLTFSIVLTAC 578
+ + + L AC
Sbjct: 328 NAVMVASTLPAC 339
Score = 108 bits (269), Expect = 1e-21
Identities = 54/195 (27%), Positives = 115/195 (58%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
+++ + + + ++L+ +Y K ++V A VF+ D+V ++MI+G+ N + E +
Sbjct: 255 VRNCVHLDVFLVSALVDIYFKCRDVRMAQNVFDATKTIDVVIGSTMISGYVLNGMSEAAV 314
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSN 362
++F+ +L +GIK + + L A + + + +KLG+E+HGY+L+ A + +
Sbjct: 315 KMFRYLLEVGIKPNAVMVASTLPACACMAA----MKLGQELHGYVLKNAYEG--RCYVES 368
Query: 363 AILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPF 542
A++ MYAK +++ + +F+ MS KD +WN+M+ ++ NG PE+++++F + + +
Sbjct: 369 ALMDMYAKCGRLDLSHYIFSKMSAKDEVTWNSMISSFAQNGEPEEALELFRQMSMEGVKY 428
Query: 543 DYLTFSIVLTACGRL 587
+T S +L+AC L
Sbjct: 429 SNVTISSILSACAGL 443
Score = 73.6 bits (179), Expect = 4e-11
Identities = 52/194 (26%), Positives = 95/194 (48%)
Frame = +3
Query: 15 LEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFK 194
L+ + + ++LI MY+ +G A VF+ + +D V WN M+ G+ + + LF
Sbjct: 57 LDRDMYVGSALIKMYADAGLLGGAREVFDGMAERDCVLWNVMMDGYVKGGDVASAVGLFG 116
Query: 195 KMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILS 374
M + D + + LS +E + G ++H ++ + V +N ++S
Sbjct: 117 AMRA---SRCDPNFATLACFLSVCATEADLLS-GLQLHTLAVKYGLEPEVAV--ANTLVS 170
Query: 375 MYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLT 554
MYAK +++A +LF+ M D +WN M+ G NG +D++++F D + L D +T
Sbjct: 171 MYAKCQCLDDAWRLFDLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVT 230
Query: 555 FSIVLTACGRLVSF 596
+ +L A L F
Sbjct: 231 LASLLPALTDLNGF 244
>ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 126 bits (316), Expect = 5e-27
Identities = 73/192 (38%), Positives = 111/192 (57%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
IK+ + ++N+LI MY+K V +A LVF K+P KD+V+WN+MI G+ QN LP + L
Sbjct: 699 IKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEAL 758
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSN 362
ELF M K DD T +L A + L + + G+EIHG+ILRR + + +
Sbjct: 759 ELFLDM-QKQFKPDDITMACVLPACAGLAA----LDKGREIHGHILRRGYFSDL--HVAC 811
Query: 363 AILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPF 542
A++ MYAK + A+ LF+ + +KD SW M+ GY M+G ++I F + +
Sbjct: 812 ALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEP 871
Query: 543 DYLTFSIVLTAC 578
D +FS++L AC
Sbjct: 872 DESSFSVILNAC 883
Score = 114 bits (284), Expect = 3e-23
Identities = 64/199 (32%), Positives = 111/199 (55%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
+K+ E SN+L+ MYSK + A+ VF K+ +V+W S I + + L +
Sbjct: 598 VKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAI 657
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSN 362
LF +M S G++ D +T T+I+ A + S + G+++H Y+++ + G +N
Sbjct: 658 GLFDEMQSKGVRPDIYTVTSIVHACACSSS----LDKGRDVHSYVIKNGM--GSNLPVTN 711
Query: 363 AILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPF 542
A+++MYAK +E A +F+ + KD SWN M+ GYS N P +++++FLD ++ P
Sbjct: 712 ALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQFKP- 770
Query: 543 DYLTFSIVLTACGRLVSFN 599
D +T + VL AC L + +
Sbjct: 771 DDITMACVLPACAGLAALD 789
Score = 92.8 bits (229), Expect = 6e-17
Identities = 57/184 (30%), Positives = 96/184 (52%)
Frame = +3
Query: 27 TSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCLELFKKMLS 206
T++ NSLI Y K+ V A +F++L D+V+WNSMI G N LE+F +ML
Sbjct: 505 TAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLI 564
Query: 207 LGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILSMYAK 386
LG++ D T ++L A +++ + + LG+ +HG+ ++ V SN +L MY+K
Sbjct: 565 LGVEVDLTTLVSVLVAWANIGN----LSLGRALHGFGVKACFSEEVV--FSNTLLDMYSK 618
Query: 387 STQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLTFSIV 566
+ A ++F M + SW + + Y G D+I +F + K + D T + +
Sbjct: 619 CGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSI 678
Query: 567 LTAC 578
+ AC
Sbjct: 679 VHAC 682
Score = 85.5 bits (210), Expect = 1e-14
Identities = 52/191 (27%), Positives = 99/191 (51%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
I + + + ++ L+ MY ++ + +F+K+ + WN +++ + + + +
Sbjct: 396 ISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESV 455
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSN 362
LFKKM LG+ + +T+T +L ++L VK K +HGY+L+ G T N
Sbjct: 456 SLFKKMQKLGVVGNCYTFTCVLKCFAALGK----VKECKRVHGYVLKLGF--GSNTAVVN 509
Query: 363 AILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPF 542
++++ Y K +E+A LF+ +SE D SWN+M++G +NG + ++IF+ +
Sbjct: 510 SLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEV 569
Query: 543 DYLTFSIVLTA 575
D T VL A
Sbjct: 570 DLTTLVSVLVA 580
>gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
Length = 696
Score = 126 bits (316), Expect = 5e-27
Identities = 68/195 (34%), Positives = 115/195 (58%), Gaps = 3/195 (1%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKE---VGKASLVFEKLPFKDMVTWNSMITGFDQNELPE 173
IKS LE T + N+LI MY++Y E + A F L KD V+WNSM+TG+ Q+ L
Sbjct: 324 IKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSA 383
Query: 174 KCLELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTF 353
L+ F+ M S ++TD++ ++A L + SE ++LGK+IHG ++ + F
Sbjct: 384 DALKFFRCMCSENVRTDEYAFSAALRS----SSELAVLQLGKQIHGLVIHSGFASN--DF 437
Query: 354 TSNAILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKN 533
S++++ MY+KS I++A K F + + WNAM+ GY+ +G+ E+ +F + ++
Sbjct: 438 VSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRK 497
Query: 534 LPFDYLTFSIVLTAC 578
P D++TF ++T+C
Sbjct: 498 APLDHITFVGLITSC 512
Score = 94.4 bits (233), Expect = 2e-17
Identities = 55/194 (28%), Positives = 112/194 (57%), Gaps = 2/194 (1%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
+KS L +++L+ +Y+K V A VF+ +P ++ V+WN++I G+ ++ L
Sbjct: 120 LKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASAL 179
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSN 362
ELF +M G+ D+ T+ ++L A+ PS F L ++HG I++ G+T N
Sbjct: 180 ELFLEMEREGLAPDEATFASLLTAVEG-PSCF----LMHQLHGKIVKYGSALGLTVL--N 232
Query: 363 AILSMYAKSTQIENAEKLFNGMSE-KDNYSWNAMMDGYSMNGRPEDSIKIFLD-KHEKNL 536
A ++ Y++ ++++ ++F+G+ + +D SWNAM+ Y+ NG ++++K F+ E +
Sbjct: 233 AAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGV 292
Query: 537 PFDYLTFSIVLTAC 578
D +F+ ++++C
Sbjct: 293 HPDMYSFTSIISSC 306
Score = 94.4 bits (233), Expect = 2e-17
Identities = 55/191 (28%), Positives = 107/191 (56%), Gaps = 5/191 (2%)
Frame = +3
Query: 30 SISNSLITMYSKYKEVGKASLVFEKL-PFKDMVTWNSMITGFDQNELPEKCLELFKKMLS 206
++ N+ IT YS+ + + +F+ + +D+++WN+M+ + N + ++ ++ F +M+
Sbjct: 229 TVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQ 288
Query: 207 -LGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILSMYA 383
G+ D +++T+I+++ S + G+ IHG +++ A L GVT NA+++MY
Sbjct: 289 ESGVHPDMYSFTSIISSCSEHGHDDHQ---GRVIHGLVIKSA-LEGVTP-VCNALIAMYT 343
Query: 384 KSTQ---IENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLT 554
+ + +E+A K FN + KD SWN+M+ GYS +G D++K F +N+ D
Sbjct: 344 RYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYA 403
Query: 555 FSIVLTACGRL 587
FS L + L
Sbjct: 404 FSAALRSSSEL 414
Score = 88.6 bits (218), Expect = 1e-15
Identities = 52/183 (28%), Positives = 103/183 (56%), Gaps = 4/183 (2%)
Frame = +3
Query: 39 NSLITMYSKYKEVGKASL--VFEKLPFKDMVTWNSMITGFDQNELPEKCLELFKKMLSLG 212
N L+T YS+ G A+ VF+++P +D V+WN+++ + + L + M + G
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQG 88
Query: 213 IKTDDHTYTAIL--AALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILSMYAK 386
+ ++ + L AA++ P+ +G ++ L+ + N V F ++A+L +YAK
Sbjct: 89 LASNTFALGSALRSAAVARRPA------IGAQLQSLALKSGLANNV--FAASALLDVYAK 140
Query: 387 STQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLTFSIV 566
++ +A ++F+GM E++ SWNA++ GY+ +G ++++FL+ + L D TF+ +
Sbjct: 141 CGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASL 200
Query: 567 LTA 575
LTA
Sbjct: 201 LTA 203
>gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
Length = 696
Score = 126 bits (316), Expect = 5e-27
Identities = 68/195 (34%), Positives = 115/195 (58%), Gaps = 3/195 (1%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKE---VGKASLVFEKLPFKDMVTWNSMITGFDQNELPE 173
IKS LE T + N+LI MY++Y E + A F L KD V+WNSM+TG+ Q+ L
Sbjct: 324 IKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSA 383
Query: 174 KCLELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTF 353
L+ F+ M S ++TD++ ++A L + SE ++LGK+IHG ++ + F
Sbjct: 384 DALKFFRCMCSENVRTDEYAFSAALRS----SSELAVLQLGKQIHGLVIHSGFASN--DF 437
Query: 354 TSNAILSMYAKSTQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKN 533
S++++ MY+KS I++A K F + + WNAM+ GY+ +G+ E+ +F + ++
Sbjct: 438 VSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRK 497
Query: 534 LPFDYLTFSIVLTAC 578
P D++TF ++T+C
Sbjct: 498 APLDHITFVGLITSC 512
Score = 94.4 bits (233), Expect = 2e-17
Identities = 55/191 (28%), Positives = 107/191 (56%), Gaps = 5/191 (2%)
Frame = +3
Query: 30 SISNSLITMYSKYKEVGKASLVFEKL-PFKDMVTWNSMITGFDQNELPEKCLELFKKMLS 206
++ N+ IT YS+ + + +F+ + +D+++WN+M+ + N + ++ ++ F +M+
Sbjct: 229 TVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQ 288
Query: 207 -LGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILSMYA 383
G+ D +++T+I+++ S + G+ IHG +++ A L GVT NA+++MY
Sbjct: 289 ESGVHPDMYSFTSIISSCSEHGHDDHQ---GRVIHGLVIKSA-LEGVTP-VCNALIAMYT 343
Query: 384 KSTQ---IENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLT 554
+ + +E+A K FN + KD SWN+M+ GYS +G D++K F +N+ D
Sbjct: 344 RYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYA 403
Query: 555 FSIVLTACGRL 587
FS L + L
Sbjct: 404 FSAALRSSSEL 414
Score = 94.0 bits (232), Expect = 3e-17
Identities = 55/194 (28%), Positives = 112/194 (57%), Gaps = 2/194 (1%)
Frame = +3
Query: 3 IKSFLEPETSISNSLITMYSKYKEVGKASLVFEKLPFKDMVTWNSMITGFDQNELPEKCL 182
+KS L +++L+ +Y+K V A VF+ +P ++ V+WN++I G+ ++ L
Sbjct: 120 LKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASAL 179
Query: 183 ELFKKMLSLGIKTDDHTYTAILAALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSN 362
ELF +M G+ D+ T+ ++L A+ PS F L ++HG I++ G+T N
Sbjct: 180 ELFLEMEREGLVPDEATFASLLTAVEG-PSCF----LMHQLHGKIVKYGSALGLTVL--N 232
Query: 363 AILSMYAKSTQIENAEKLFNGMSE-KDNYSWNAMMDGYSMNGRPEDSIKIFLD-KHEKNL 536
A ++ Y++ ++++ ++F+G+ + +D SWNAM+ Y+ NG ++++K F+ E +
Sbjct: 233 AAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGV 292
Query: 537 PFDYLTFSIVLTAC 578
D +F+ ++++C
Sbjct: 293 HPDMYSFTSIISSC 306
Score = 89.0 bits (219), Expect = 9e-16
Identities = 52/183 (28%), Positives = 103/183 (56%), Gaps = 4/183 (2%)
Frame = +3
Query: 39 NSLITMYSKYKEVGKASL--VFEKLPFKDMVTWNSMITGFDQNELPEKCLELFKKMLSLG 212
N L+T YS+ G A+ VF+++P +D V+WN+++ + + L + M + G
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHAASGAHPEAWRLLRAMHAQG 88
Query: 213 IKTDDHTYTAIL--AALSSLPSEFRYVKLGKEIHGYILRRAVLNGVTTFTSNAILSMYAK 386
+ ++ + L AA++ P+ +G ++ L+ + N V F ++A+L +YAK
Sbjct: 89 LASNTFALGSALRSAAVARRPA------IGAQLQSLALKSGLANNV--FAASALLDVYAK 140
Query: 387 STQIENAEKLFNGMSEKDNYSWNAMMDGYSMNGRPEDSIKIFLDKHEKNLPFDYLTFSIV 566
++ +A ++F+GM E++ SWNA++ GY+ +G ++++FL+ + L D TF+ +
Sbjct: 141 CGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLVPDEATFASL 200
Query: 567 LTA 575
LTA
Sbjct: 201 LTA 203