BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00043518
         (813 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   225   1e-56
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              221   2e-55
ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub...   214   4e-53
ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citr...   212   1e-52
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   209   7e-52
emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]   209   7e-52
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ...   208   2e-51
ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform ...   208   2e-51
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...   183   7e-44
gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus...   181   2e-43
gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus...   177   4e-42
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   173   6e-41
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...   173   6e-41
ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phas...   171   4e-40
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub...   169   1e-39
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub...   163   6e-38
ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I sub...   161   3e-37
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...   159   1e-36
ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arab...   152   1e-34
ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Caps...   149   2e-33

>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score =  225 bits (574), Expect = 1e-56
 Identities = 129/286 (45%), Positives = 175/286 (61%), Gaps = 16/286 (5%)
 Frame = -2

Query: 812  KGDITGAKNLDM---AECSAWEESDADQTACTSKP-SEVRYNNNQNSEQHHWTSLQYSEA 645
            KGD+ GAKNLD    +E S  E+SD    +C+S   S  R N + + +Q  WTSLQ  EA
Sbjct: 178  KGDVVGAKNLDSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQQEWTSLQCIEA 237

Query: 644  MSVLDGLLGSKPSACRRCSAKNPRISCPTFGWFYM-NMSKASTRANVIQGVELNESFDDG 468
            MSV+D  L  K   C+ C AK+P+++ PTFGWF+M  +S A TRANVI+G +L       
Sbjct: 238  MSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKLERPLSRV 297

Query: 467  AEQDVIGEVRH--------SGVSDSEDMESAGSVYNGTPSPGKKSRNKGVSGPPSEYLKQ 312
            AE+    EV +         GV   E   S         +  K+   KG    P E++KQ
Sbjct: 298  AEEKSSSEVENVNDMFPWGDGVDTDETHSSIAPTDGIQDTVTKRLERKGAQA-PIEFIKQ 356

Query: 311  SNFFSGVLLPSEAKDHMKLVWENENQICSLICDIQQQ--GMTQKRSSYSMFFIEALLVAP 138
             +FFSG LLPSE +D M+ +WENE ++CS I DI Q+  G +  ++ YSMFF+E +LV P
Sbjct: 357  KSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSMFFLETILVPP 416

Query: 137  VKFRPPSKGAM-VSDHPQTLLLGKVLESNIKLANAHMNSSEDTRFV 3
            +KFRPPSKG + V +HPQT+LLGKVL++NI L NAH N+SE ++ +
Sbjct: 417  IKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKII 462


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  221 bits (563), Expect = 2e-55
 Identities = 125/278 (44%), Positives = 177/278 (63%), Gaps = 8/278 (2%)
 Frame = -2

Query: 812 KGDITGAKNLDM---AECSAWEESDADQTACTSKP-SEVRYNNNQNSEQHHWTSLQYSEA 645
           KGD+ GAKNLD    +E S  E+SD    +C+S   S  R N + + +Q  WTSLQ  EA
Sbjct: 129 KGDVVGAKNLDSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQQEWTSLQCIEA 188

Query: 644 MSVLDGLLGSKPSACRRCSAKNPRISCPTFGWFYM-NMSKASTRANVIQGVELNESFDDG 468
           MSV+D  L  K   C+ C AK+P+++ PTFGWF+M  +S A TRANVI+G +L     +G
Sbjct: 189 MSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKLERPL-NG 247

Query: 467 AEQDVIGEVRHSGVSDSEDMESAGSVYNGTPSPGKKSRNKGVSGPPSEYLKQSNFFSGVL 288
            + D      HS ++ ++ ++   +         K+   KG    P E++KQ +FFSG L
Sbjct: 248 VDTD----ETHSSIAPTDGIQDTVT---------KRLERKGAQA-PIEFIKQKSFFSGPL 293

Query: 287 LPSEAKDHMKLVWENENQICSLICDIQQQ--GMTQKRSSYSMFFIEALLVAPVKFRPPSK 114
           LPSE +D M+ +WENE ++CS I DI Q+  G +  ++ YSMFF+E +LV P+KFRPPSK
Sbjct: 294 LPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSMFFLETILVPPIKFRPPSK 353

Query: 113 GAM-VSDHPQTLLLGKVLESNIKLANAHMNSSEDTRFV 3
           G + V +HPQT+LLGKVL++NI L NAH N+SE ++ +
Sbjct: 354 GQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKII 391


>ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus
           sinensis]
          Length = 1715

 Score =  214 bits (544), Expect = 4e-53
 Identities = 119/276 (43%), Positives = 172/276 (62%), Gaps = 6/276 (2%)
 Frame = -2

Query: 812 KGDITGAKNLDM---AECSAWEESD-ADQTACTSKPSEVRYNNNQNSEQHHWTSLQYSEA 645
           KGDI  AK+LD+   +E S  E+SD +++++C+       Y+N +N +   WTSLQ++EA
Sbjct: 129 KGDIIAAKSLDLDLPSESSNPEDSDVSNKSSCSMVTPRGNYDNVRNLKPQEWTSLQFAEA 188

Query: 644 MSVLDGLLGSKPSACRRCSAKNPRISCPTFGWFYMN-MSKASTRANVIQGVELNESFDDG 468
              L   L  + + C  C AKNPRIS PTFGW +MN M  A  RAN+I+G  L E+F  G
Sbjct: 189 KLALLQFLKIETTKCGNCKAKNPRISKPTFGWIHMNGMPHADIRANLIRGCNLGETFSGG 248

Query: 467 AEQDVIGEVRHSGVSDSEDMESAGSVYNGTPSPGKKSRNKGVSGPPSEYLKQSNFFSGVL 288
            E+  +G    S   D+ +  S    + GT     +   KG    PS + KQ + FSG L
Sbjct: 249 EEEKDLGA---SSDVDAPETHSFNGTFPGTQDTAARRHQKGSGAVPSGFKKQKDLFSGPL 305

Query: 287 LPSEAKDHMKLVWENENQICSLICDIQQQGMTQKRSSYSMFFIEALLVAPVKFRPPSKGA 108
           LPS+ KD ++ +WENE ++CS I D+QQQG   K++ +S+FF+ A+LV P+KFR PSKG 
Sbjct: 306 LPSDVKDIIEKLWENEFELCSFISDMQQQGF-GKKAGHSIFFLGAVLVPPIKFRLPSKGG 364

Query: 107 -MVSDHPQTLLLGKVLESNIKLANAHMNSSEDTRFV 3
             V +HPQT+LL KVL++NI LANA++N  ++ + +
Sbjct: 365 DSVMEHPQTVLLSKVLQANIYLANAYVNQPDNAKII 400


>ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citrus clementina]
           gi|557523327|gb|ESR34694.1| hypothetical protein
           CICLE_v10004132mg [Citrus clementina]
          Length = 1715

 Score =  212 bits (539), Expect = 1e-52
 Identities = 118/276 (42%), Positives = 171/276 (61%), Gaps = 6/276 (2%)
 Frame = -2

Query: 812 KGDITGAKNLDM---AECSAWEESD-ADQTACTSKPSEVRYNNNQNSEQHHWTSLQYSEA 645
           KGDI  AK+LD+   +E S  E+SD +++++C+       Y+N +N +   WTSLQ++EA
Sbjct: 129 KGDIIAAKSLDLDLPSESSNPEDSDVSNKSSCSMVTPRGNYDNVRNLKPQEWTSLQFAEA 188

Query: 644 MSVLDGLLGSKPSACRRCSAKNPRISCPTFGWFYMN-MSKASTRANVIQGVELNESFDDG 468
              L   L  + + C  C AKNPRIS PTFGW +MN M  A  RAN+I+G  L E+F  G
Sbjct: 189 KLALLQFLKIETTKCGNCKAKNPRISKPTFGWIHMNGMPHADIRANLIRGCNLGETFSGG 248

Query: 467 AEQDVIGEVRHSGVSDSEDMESAGSVYNGTPSPGKKSRNKGVSGPPSEYLKQSNFFSGVL 288
            E+  +G    S   D+ +  S    + GT     +   KG    PS + KQ + FSG L
Sbjct: 249 EEEKDLGT---SSDVDAPETHSFNGAFPGTQDTAARRHQKGSGAVPSGFKKQKDLFSGPL 305

Query: 287 LPSEAKDHMKLVWENENQICSLICDIQQQGMTQKRSSYSMFFIEALLVAPVKFRPPSKGA 108
           LPS+ KD ++ +WENE ++CS I D+QQQG   K++ +S+FF+  +LV P+KFR PSKG 
Sbjct: 306 LPSDVKDIIEKLWENEFELCSFISDMQQQGF-GKKAGHSIFFLGVVLVPPIKFRLPSKGG 364

Query: 107 -MVSDHPQTLLLGKVLESNIKLANAHMNSSEDTRFV 3
             V +HPQT+LL KVL++NI LANA++N  ++ + +
Sbjct: 365 DSVMEHPQTVLLSKVLQANIYLANAYVNQPDNAKVI 400


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
           communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
           polymerase I largest subunit, putative [Ricinus
           communis]
          Length = 1686

 Score =  209 bits (533), Expect = 7e-52
 Identities = 117/267 (43%), Positives = 164/267 (61%), Gaps = 5/267 (1%)
 Frame = -2

Query: 812 KGDITGAKNLDM---AECSAWEESDADQTACTSKPSEVRYNNNQNSEQHHWTSLQYSEAM 642
           KGDI GAK L+    +E    EESD    +C +  S V+ N+ +++ Q  WTSLQ++EAM
Sbjct: 132 KGDIVGAKRLESVSPSEALYPEESDLSHESCPTIHSGVQCNDGEHTRQQGWTSLQFTEAM 191

Query: 641 SVLDGLLGSKPSACRRCSAKNPRISCPTFGWFYMN-MSKASTRANVIQGVELNESFDDGA 465
           SVL+  L  K   C+ C + NP I+ PTFGWF+ + MS AS RANVI G +L        
Sbjct: 192 SVLNNFLKPKFKKCKNCESSNPNITKPTFGWFHTSGMSDASIRANVITGHQLGGLLGSEI 251

Query: 464 EQDVIGEVRHSGVSDSEDMESAGSVYNGTPSPGKKSRNKGVSGPPSEYLKQSNFFSGVLL 285
           E          G +D ED    G  ++GT    KK R + +     E+ +Q + FS  LL
Sbjct: 252 E----------GTTDVEDAAEPGDQHSGTKKHKKKERKEVL-----EFTRQKSTFSKQLL 296

Query: 284 PSEAKDHMKLVWENENQICSLICDIQQQGMTQKRSSYSMFFIEALLVAPVKFRPPSKGA- 108
           PSE K+ ++L+W+NE +ICS I D+QQQ   ++++  +MFF+E +LV P+KFRPP+KG  
Sbjct: 297 PSEVKEKLELLWKNEARICSFISDLQQQEFGKRKAGPAMFFLETILVPPIKFRPPTKGGD 356

Query: 107 MVSDHPQTLLLGKVLESNIKLANAHMN 27
            V +HPQT+LL KVL+SNI L +AH+N
Sbjct: 357 SVMEHPQTVLLSKVLQSNISLGDAHIN 383


>emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]
          Length = 1350

 Score =  209 bits (533), Expect = 7e-52
 Identities = 128/314 (40%), Positives = 180/314 (57%), Gaps = 44/314 (14%)
 Frame = -2

Query: 812  KGDITGAKNLDM---AECSAWEESDADQTACTSKP-SEVRYNNNQNSEQHHWTSLQYSEA 645
            KGD+ GAKNLD    +E S  E+SD    +C+S   S  R N + + +Q  WTSLQ  EA
Sbjct: 198  KGDVVGAKNLDSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQQEWTSLQCIEA 257

Query: 644  MSVLDGLLGSKPSACRRCSAKNPRISCPTFGWFYM-NMSKASTRANVIQGVELNESFDDG 468
            MSV+D  L  K   C+ C AK+P+++ PTFGWF+M  +S A TRANVI+G +L       
Sbjct: 258  MSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKLERPLSRV 317

Query: 467  AEQDVIGEVRH--------SGVSDSEDMESAGSVYNGTPSPGKKSRNKGVSGPPSEYLKQ 312
            AE+    EV +         GV D+++  S+ +  +G      K   +  +  P E++KQ
Sbjct: 318  AEEKSSSEVENVNDMFPWGDGV-DTDETHSSIAPTDGIQDTVTKXLERKGAQAPIEFIKQ 376

Query: 311  SNFFSGVLLPSE----------------------------AKDHMKLVWENENQICSLIC 216
             +FFSG LLPSE                             +D M+ +WENE ++CS I 
Sbjct: 377  KSFFSGPLLPSEVCFLXALEHHHQLPWLMSVVVVNYVVTKVRDIMERLWENEAELCSFIS 436

Query: 215  DIQQQ--GMTQKRSSYSMFFIEALLVAPVKFRPPSKGAM-VSDHPQTLLLGKVLESNIKL 45
            DI Q+  G +  ++ YSMFF+E +LV P+KFRPPSKG + V +HPQT+LLGKVL++NI L
Sbjct: 437  DILQERLGASGNKAGYSMFFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIAL 496

Query: 44   ANAHMNSSEDTRFV 3
             NAH N+SE ++ +
Sbjct: 497  GNAHANNSERSKII 510


>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
           gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
           putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score =  208 bits (530), Expect = 2e-51
 Identities = 123/283 (43%), Positives = 169/283 (59%), Gaps = 14/283 (4%)
 Frame = -2

Query: 809 GDITGAKNLDMAECSAWEESDADQTACTSKPSEVRYNNNQNSEQHHWTSLQYSEAMSVLD 630
           GDI GAK LD     A   SD ++    S+ S    +N++  +   WTSLQ  EAMSVL+
Sbjct: 130 GDIVGAKRLDSDSADASSYSDYNEG---SQESGSIVHNSEAVKPKEWTSLQLMEAMSVLN 186

Query: 629 GLLGSKPSACRRCSAKNPRISCPTFGWFYMN-MSKASTRANVIQGVELNESFDDGAEQDV 453
             L  K + C+ C AKNP I+ P FGW +MN M  A  R NVI+G ++ ++F D A    
Sbjct: 187 NFLKLKYNKCKNCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVDTFSDEAG--- 243

Query: 452 IGEVRHSGVSDSEDMESAGSV------------YNGTPSPGKKSRNKGVSGPPSEYLKQS 309
                 SG+ D++D+ S+G+             + G+   G K+R K     P E++KQ 
Sbjct: 244 ------SGLEDADDVSSSGNGVDIAEMDTSEIGFTGSEGNGAKARKKKAQ-VPLEFMKQK 296

Query: 308 NFFSGVLLPSEAKDHMKLVWENENQICSLICDIQQQGMTQKRSSYSMFFIEALLVAPVKF 129
           N FSG LLPSE K   KL+WENE ++CS+I DIQQQG   K+  YSMFF+E +LV P+KF
Sbjct: 297 NLFSGPLLPSEVKKITKLLWENEVELCSIISDIQQQGF-GKKVGYSMFFLETILVPPIKF 355

Query: 128 RPPSKGA-MVSDHPQTLLLGKVLESNIKLANAHMNSSEDTRFV 3
           R P+KG   V +HPQT+LL KVL++NI L NA+ N+ + ++ V
Sbjct: 356 RAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYTNNLQSSKAV 398


>ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
           gi|508717458|gb|EOY09355.1| Nuclear RNA polymerase A1,
           putative isoform 1 [Theobroma cacao]
          Length = 1665

 Score =  208 bits (530), Expect = 2e-51
 Identities = 123/283 (43%), Positives = 169/283 (59%), Gaps = 14/283 (4%)
 Frame = -2

Query: 809 GDITGAKNLDMAECSAWEESDADQTACTSKPSEVRYNNNQNSEQHHWTSLQYSEAMSVLD 630
           GDI GAK LD     A   SD ++    S+ S    +N++  +   WTSLQ  EAMSVL+
Sbjct: 130 GDIVGAKRLDSDSADASSYSDYNEG---SQESGSIVHNSEAVKPKEWTSLQLMEAMSVLN 186

Query: 629 GLLGSKPSACRRCSAKNPRISCPTFGWFYMN-MSKASTRANVIQGVELNESFDDGAEQDV 453
             L  K + C+ C AKNP I+ P FGW +MN M  A  R NVI+G ++ ++F D A    
Sbjct: 187 NFLKLKYNKCKNCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVDTFSDEAG--- 243

Query: 452 IGEVRHSGVSDSEDMESAGSV------------YNGTPSPGKKSRNKGVSGPPSEYLKQS 309
                 SG+ D++D+ S+G+             + G+   G K+R K     P E++KQ 
Sbjct: 244 ------SGLEDADDVSSSGNGVDIAEMDTSEIGFTGSEGNGAKARKKKAQ-VPLEFMKQK 296

Query: 308 NFFSGVLLPSEAKDHMKLVWENENQICSLICDIQQQGMTQKRSSYSMFFIEALLVAPVKF 129
           N FSG LLPSE K   KL+WENE ++CS+I DIQQQG   K+  YSMFF+E +LV P+KF
Sbjct: 297 NLFSGPLLPSEVKKITKLLWENEVELCSIISDIQQQGF-GKKVGYSMFFLETILVPPIKF 355

Query: 128 RPPSKGA-MVSDHPQTLLLGKVLESNIKLANAHMNSSEDTRFV 3
           R P+KG   V +HPQT+LL KVL++NI L NA+ N+ + ++ V
Sbjct: 356 RAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYTNNLQSSKAV 398


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
           max]
          Length = 1651

 Score =  183 bits (464), Expect = 7e-44
 Identities = 117/280 (41%), Positives = 160/280 (57%), Gaps = 12/280 (4%)
 Frame = -2

Query: 812 KGDITGAKNLDMAECSAWEES----------DADQTACTSKPSEVRYNNNQNSEQHHWTS 663
           KGDI  AK L+        +S          D D++ C        Y+  Q  E  +WTS
Sbjct: 129 KGDIIRAKRLESIIPGKSVDSFNPDESIHPGDGDESQC--------YSAEQLGE--NWTS 178

Query: 662 LQYSEAMSVLDGLLGSKPSACRRCSAKNPRISCPTFGWFYMN-MSKASTRANVIQGVELN 486
           LQ+SEAMSVL  LL  K   C++C AKNP+IS PTFGWF+MN +S   TRA+ I+ VE  
Sbjct: 179 LQFSEAMSVLRKLLTKKHKKCQKCGAKNPKISKPTFGWFHMNVLSADETRADTIRSVESE 238

Query: 485 ESFDDGAEQDVIGEVRHSGVSDSEDMESAGSVYNGTPSPGKKSRNKGVSGPPSEYLKQSN 306
            + DD +       +     +D ED+ SAG+            R+K      S  L + N
Sbjct: 239 TTNDDIS-------LGGGDTTDVEDITSAGTA----------KRDKRKKEKLSYKLAEQN 281

Query: 305 FFSGVLLPSEAKDHMKLVWENENQICSLICDIQQQGMTQKRSSYSMFFIEALLVAPVKFR 126
             SG LLPS+ K  ++L+WENE ++CS I DIQ QG   K++ +SMFF+E + V P+KFR
Sbjct: 282 KLSGSLLPSQVKGILELLWENEARLCSYINDIQDQGF-GKKAGHSMFFLENIFVPPIKFR 340

Query: 125 PPSKGA-MVSDHPQTLLLGKVLESNIKLANAHMNSSEDTR 9
           PP+KG   V +HPQT+LL KVL+ NI L +AH+N S+ ++
Sbjct: 341 PPTKGGDNVMEHPQTVLLTKVLQCNISLGDAHLNKSDPSK 380


>gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus guttatus]
          Length = 1719

 Score =  181 bits (460), Expect = 2e-43
 Identities = 120/298 (40%), Positives = 166/298 (55%), Gaps = 33/298 (11%)
 Frame = -2

Query: 812 KGDITGAKNL----------DMAECSAWEESDADQTACTSKPSEVRY-----NNNQNSEQ 678
           KGD+ GAK L           M   S  +++D  + +  S  S         N+ ++ EQ
Sbjct: 128 KGDLAGAKKLALGSSFKGKKKMVFVSTDDDTDEREDSQGSHMSHSAVLSDGENHFKDDEQ 187

Query: 677 HHWTSLQYSEAMSVLDGLLGSKPSACRRCSAKNPRISCPTFGWFYMN--MSKASTRANVI 504
             W+S Q +EA+SV++  L  K   C  C  + P+IS PTFGWF +    S  + R NVI
Sbjct: 188 ASWSSAQLAEAISVMNEYLRRKGKKCMNCEMRCPKISKPTFGWFQVGGATSAKAIRENVI 247

Query: 503 QGVELNESFDDGAEQDVIGEV----RHSGVSDSEDMESAGSVYNGTPSPGKKSRNKGV-- 342
           +  +L+ES  DG E +   EV     HS   DSE +ES  + +  T +  KKS+ KGV  
Sbjct: 248 RSHKLDESDSDGGEDNFSSEVVNAGDHSMNDDSETVES--NSFIATSNSTKKSKKKGVNR 305

Query: 341 -------SGPPSEYLKQSNFFSGVLLPSEAKDHMKLVWENENQICSLICDIQQQGMTQ-- 189
                  SG P+ YL      SG LLPS+ +D +KL+WE E   CS I DIQ+Q      
Sbjct: 306 AKKLNPGSGDPNFYL------SGPLLPSQVRDILKLLWEKEASFCSYISDIQRQKCKPFG 359

Query: 188 KRSSYSMFFIEALLVAPVKFRPPSKGA-MVSDHPQTLLLGKVLESNIKLANAHMNSSE 18
            ++ YSMFF+E +LV P++FRPP+KG   V +HPQT+LLGKVL+SNI L NAH+N+ +
Sbjct: 360 NKTGYSMFFLETVLVPPIRFRPPAKGGDSVMEHPQTVLLGKVLQSNIALGNAHVNAEK 417


>gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus notabilis]
          Length = 1770

 Score =  177 bits (449), Expect = 4e-42
 Identities = 115/281 (40%), Positives = 159/281 (56%), Gaps = 11/281 (3%)
 Frame = -2

Query: 812 KGDITGAKNLDMAECSAWEESDADQTACTSKPSEVRYNNNQN-----SEQHHWTSLQYSE 648
           KGD+  AK+L+    S            +S   +  Y  +++     S Q   TSLQ SE
Sbjct: 71  KGDVARAKDLNSRPSSE-----------SSHLKDYGYRGSKDRSAKPSTQPKLTSLQLSE 119

Query: 647 AMSVLDGLLGSKPSACRRCSAKNPRISCPTFGWFYMN-MSKASTRANVIQGVELNESFDD 471
           AMSVL+  L    + CR C A    I+ P FGW  M  +S A  RANVI+  +L   F D
Sbjct: 120 AMSVLNNFLKPNHTKCRNCEAHRLTITQPVFGWLNMERISGARARANVIRNSKLEGPFSD 179

Query: 470 GA---EQDVIGEVRHSGVSDSEDMESAGSVYNGTPSPGKKSRNKGVSGPPSEYLKQSNFF 300
           G    E+++I +V  S  SD++           TP+   KS        P EYLKQ+  F
Sbjct: 180 GESLPEEEIINDVT-SPDSDAD---------TDTPATSTKSHRSKGGKVPREYLKQTETF 229

Query: 299 SG-VLLPSEAKDHMKLVWENENQICSLICDIQQQGMTQKRSSYSMFFIEALLVAPVKFRP 123
           SG  +LPS+ K+ ++L+WENE ++C+ I DIQ QG+  K + +SMFF+E +LV P+KFRP
Sbjct: 230 SGGPMLPSDVKEMIRLLWENEIELCTYITDIQHQGIGNK-ADHSMFFLETILVPPIKFRP 288

Query: 122 PSKGA-MVSDHPQTLLLGKVLESNIKLANAHMNSSEDTRFV 3
           PSKG   V +HP T+LL KVL++NI+L NAH+N  E T+ V
Sbjct: 289 PSKGGDSVMEHPHTVLLNKVLQANIELGNAHVNKLEYTKIV 329


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I
           subunit RPA1-like [Cucumis sativus]
          Length = 1652

 Score =  173 bits (439), Expect = 6e-41
 Identities = 105/262 (40%), Positives = 143/262 (54%), Gaps = 2/262 (0%)
 Frame = -2

Query: 782 DMAECSAWEESDADQTACTSKPSEVRYNNNQNSEQHHWTSLQYSEAMSVLDGLLGSKPSA 603
           ++A+    EE   +  + T     +     +N +   WTSLQ+SEA+SV+   L  K S 
Sbjct: 137 EIAKAKELEEEWMNSKSRTKSSHSMYTYERKNGQPETWTSLQFSEAISVVTKFLKPKQSN 196

Query: 602 CRRCSAKNPRISCPTFGWFYM-NMSKASTRANVIQGVELNESFDDGAEQDVIGEVRHSGV 426
           C+ C AK+P+I+ PTFGWF+M  ++    RAN I+                    R   V
Sbjct: 197 CKYCGAKSPKITKPTFGWFHMKGLAGVQKRANAIR--------------------RSKPV 236

Query: 425 SDSEDMESAGSVYNGTPSPGKKSRNKGVSGPPSEYLKQSNFFSGVLLPSEAKDHMKLVWE 246
           S S   E   S+   T +       + VS    E   Q NF SG LLPSE KD +K +W+
Sbjct: 237 SVSSGAEGVSSLEEETTTEATVEDFEDVS---PEVFMQKNFSSGHLLPSEVKDILKRLWK 293

Query: 245 NENQICSLICDIQQQGMTQKRSSYSMFFIEALLVAPVKFRPPSKGA-MVSDHPQTLLLGK 69
           NE  +CS I DI QQG   K + +SMFF+E++LV P+KFRPP+KG   V +HPQT+LL K
Sbjct: 294 NEALLCSFISDISQQGHGNK-AGHSMFFLESVLVPPIKFRPPAKGGDSVMEHPQTVLLNK 352

Query: 68  VLESNIKLANAHMNSSEDTRFV 3
           VL+SNI L N H N SE ++ V
Sbjct: 353 VLQSNISLGNGHANKSEHSKIV 374


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
           sativus]
          Length = 1650

 Score =  173 bits (439), Expect = 6e-41
 Identities = 105/262 (40%), Positives = 143/262 (54%), Gaps = 2/262 (0%)
 Frame = -2

Query: 782 DMAECSAWEESDADQTACTSKPSEVRYNNNQNSEQHHWTSLQYSEAMSVLDGLLGSKPSA 603
           ++A+    EE   +  + T     +     +N +   WTSLQ+SEA+SV+   L  K S 
Sbjct: 131 EIAKAKELEEEWMNSKSRTKSSHSMYTYERKNGQPETWTSLQFSEAISVVTKFLKPKQSN 190

Query: 602 CRRCSAKNPRISCPTFGWFYM-NMSKASTRANVIQGVELNESFDDGAEQDVIGEVRHSGV 426
           C+ C AK+P+I+ PTFGWF+M  ++    RAN I+                    R   V
Sbjct: 191 CKYCGAKSPKITKPTFGWFHMKGLAGVQKRANAIR--------------------RSKPV 230

Query: 425 SDSEDMESAGSVYNGTPSPGKKSRNKGVSGPPSEYLKQSNFFSGVLLPSEAKDHMKLVWE 246
           S S   E   S+   T +       + VS    E   Q NF SG LLPSE KD +K +W+
Sbjct: 231 SVSSGAEGVSSLEEETTTEATVEDFEDVS---PEVFMQKNFSSGHLLPSEVKDILKRLWK 287

Query: 245 NENQICSLICDIQQQGMTQKRSSYSMFFIEALLVAPVKFRPPSKGA-MVSDHPQTLLLGK 69
           NE  +CS I DI QQG   K + +SMFF+E++LV P+KFRPP+KG   V +HPQT+LL K
Sbjct: 288 NEALLCSFISDISQQGHGNK-AGHSMFFLESVLVPPIKFRPPAKGGDSVMEHPQTVLLNK 346

Query: 68  VLESNIKLANAHMNSSEDTRFV 3
           VL+SNI L N H N SE ++ V
Sbjct: 347 VLQSNISLGNGHANKSEHSKIV 368


>ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
           gi|561018822|gb|ESW17626.1| hypothetical protein
           PHAVU_007G255400g [Phaseolus vulgaris]
          Length = 1637

 Score =  171 bits (432), Expect = 4e-40
 Identities = 108/271 (39%), Positives = 149/271 (54%), Gaps = 3/271 (1%)
 Frame = -2

Query: 812 KGDITGAKNLDMAECSAWEES-DADQTACTSKPSEVRYNNNQNSEQHHWTSLQYSEAMSV 636
           KGDI  AK+LD         S D D++    +  E            +W+SLQ+SEAMSV
Sbjct: 129 KGDIIRAKSLDSIISDESNHSGDGDESQGVEQLGE------------NWSSLQFSEAMSV 176

Query: 635 LDGLLGSKPSACRRCSAKNPRISCPTFGWFYMN-MSKASTRANVIQGVELNESFDDGAEQ 459
           L   L  K   C+ C   NPRIS PTFGWF+MN +S    RAN ++ +E     DD +  
Sbjct: 177 LRKFLLRKYKKCQNCGVVNPRISKPTFGWFHMNVLSDDEARANTMRALESETINDDMS-- 234

Query: 458 DVIGEVRHSGVSDSEDMESAGSVYNGTPSPGKKSRNKGVSGPPSEYLKQSNFFSGVLLPS 279
                +     ++ ED+ S G+            R+K   G  S  L   N  SG LLPS
Sbjct: 235 -----LGGGETTEEEDITSTGTA----------KRDKRKKGKLSSKLAAQNKLSGSLLPS 279

Query: 278 EAKDHMKLVWENENQICSLICDIQQQGMTQKRSSYSMFFIEALLVAPVKFRPPSKGA-MV 102
           + K  ++L+WENE ++CS I DIQ QG   K++ +SMFF+E + V P+KFRPP+KG   V
Sbjct: 280 QVKGILELLWENEARLCSYISDIQDQGF-GKKAGHSMFFLENIFVPPIKFRPPTKGGDDV 338

Query: 101 SDHPQTLLLGKVLESNIKLANAHMNSSEDTR 9
            +HPQT+LL KVL+ NI L +AH+N  + ++
Sbjct: 339 MEHPQTVLLTKVLQGNISLGDAHINKLDPSK 369


>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
           arietinum]
          Length = 1650

 Score =  169 bits (428), Expect = 1e-39
 Identities = 109/268 (40%), Positives = 153/268 (57%), Gaps = 3/268 (1%)
 Frame = -2

Query: 812 KGDITGAKNLDMAECSAWEE-SDADQTACTSKPSEVRYNNNQNSEQHHWTSLQYSEAMSV 636
           KG+I  AKNLD        + SD + + C+S        + Q  E  +WTSLQ+SEAMSV
Sbjct: 129 KGNIAKAKNLDAINLDESADLSDGNDSQCSS--------DEQLGE--NWTSLQFSEAMSV 178

Query: 635 LDGLLGSKPSACRRCSAKNPRISCPTFGWFYMN-MSKASTRANVIQGVELNESFDDGAEQ 459
           L   L  +   C+ C   NP+I+ PTFGWF++  +S A  RANVI G+      D     
Sbjct: 179 LRKFLKKEFRKCQNCGNINPKITKPTFGWFHVKALSAAQARANVISGI------DASLAS 232

Query: 458 DVIGEVRHSGVSDSEDMESAGSVYNGTPSPGKKSRNKGVSGPPSEYLKQSNFFSGVLLPS 279
           ++I +    G  D+ D+E   S    T +   K +NK         L + N  SG LLPS
Sbjct: 233 EIIHDDISLGNGDTTDVEDITS--GDTANSNAKRQNK---------LARHNKLSGSLLPS 281

Query: 278 EAKDHMKLVWENENQICSLICDIQQQGMTQKRSSYSMFFIEALLVAPVKFRPPSKG-AMV 102
           + +  ++L+WENE ++C  I DIQ QG   K++ +SMFF++ + V P+KFRPP+KG   V
Sbjct: 282 QVQGILELLWENEARLCLYISDIQGQGF-GKKAGHSMFFLDNIYVPPIKFRPPTKGDDKV 340

Query: 101 SDHPQTLLLGKVLESNIKLANAHMNSSE 18
           S+H QT+LL +VLESNI L  AH+N S+
Sbjct: 341 SEHAQTVLLTRVLESNISLGQAHLNKSD 368


>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
           lycopersicum]
          Length = 1677

 Score =  163 bits (413), Expect = 6e-38
 Identities = 101/280 (36%), Positives = 160/280 (57%), Gaps = 10/280 (3%)
 Frame = -2

Query: 812 KGDITGAKNLDMAE---CSAWEESDADQTACTSKPSEVRYNNNQNSEQHHWTSLQYSEAM 642
           KGD+ GAK +D       +  EES+    +CT     VR +   N ++  W + Q++EAM
Sbjct: 124 KGDVVGAKMIDALSPDNSTDREESEGSHMSCTMDDLNVRDHCEYN-KRPSWDNFQFTEAM 182

Query: 641 SVLDGLLGSKPSACRRCSAKNPRISCPTFGWFYMNMSKASTRANVI-QGVELNESFDDGA 465
           +V+D +L +K   C  C AKNP+I  P+FG F+M++S    R N I  G   N     G+
Sbjct: 183 AVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHMDISNKQIRENYINSGRRFNLHDTGGS 242

Query: 464 EQDVIGEVRHSGVSDSEDMESAGSVYNGTPSPGKKSR--NKGVSGPPSEYL-KQSNFFSG 294
           E++   EV    V+ +E +  A +    T + G ++    K   G  S+ + +Q + FS 
Sbjct: 243 EENPSPEV----VNATEPLGEAETSLCVTSTDGVENSKGRKRQGGDQSDVVEQQKDSFSV 298

Query: 293 VLLPSEAKDHMKLVWENENQICSLICDIQQQ--GMTQKRSSYSMFFIEALLVAPVKFRPP 120
             LPS+ +  ++ +WENE  +C+  CDIQ Q    + K +  SMFF++++LV PVKFRPP
Sbjct: 299 AHLPSQVRSIIEHLWENEAPLCTFFCDIQSQHRNTSGKVAGPSMFFLDSILVPPVKFRPP 358

Query: 119 SKGA-MVSDHPQTLLLGKVLESNIKLANAHMNSSEDTRFV 3
           +KG   + +HP T+LLGKV+++NI L NAH+N +  ++ +
Sbjct: 359 AKGGDSIMEHPHTVLLGKVIQANIALGNAHINRAGRSKII 398


>ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
           arietinum]
          Length = 1660

 Score =  161 bits (407), Expect = 3e-37
 Identities = 103/270 (38%), Positives = 153/270 (56%), Gaps = 5/270 (1%)
 Frame = -2

Query: 812 KGDITGAKNLDMAECSAWEE-SDADQTACTSKPSEVRYNNNQNSEQ--HHWTSLQYSEAM 642
           KG+I  AKNLD        +  D D + C+S            +EQ   +WTSLQ+SEAM
Sbjct: 129 KGNIAKAKNLDEINLDESADLCDGDDSQCSS------------AEQLGENWTSLQFSEAM 176

Query: 641 SVLDGLLGSKPSACRRCSAKNPRISCPTFGWFYMN-MSKASTRANVIQGVELNESFDDGA 465
           SVL   L  +   C+ C   NP+I+ PTFGWF++  +S A  RANVI G +++       
Sbjct: 177 SVLRKFLKKEYRKCQNCGYINPKITIPTFGWFHVKALSAAQARANVISGNDVS------L 230

Query: 464 EQDVIGEVRHSGVSDSEDMESAGSVYNGTPSPGKKSRNKGVSGPPSEYLKQSNFFSGVLL 285
             ++I +    G  D+ D+E   S      +  + ++ K +S         S+  +G LL
Sbjct: 231 ASEIIHDDISLGNGDTTDVEDITSGDIANSNAKRHNKEKQIS---------SHTLAGSLL 281

Query: 284 PSEAKDHMKLVWENENQICSLICDIQQQGMTQKRSSYSMFFIEALLVAPVKFRPPSKG-A 108
           PS+ +  ++L+WEN+ ++C  I DIQ  G+  K++ +SMFF+E + V P+KFRPP+KG  
Sbjct: 282 PSQVQRILELLWENDARLCLYISDIQGLGI-GKKAGHSMFFLENIYVPPIKFRPPTKGDD 340

Query: 107 MVSDHPQTLLLGKVLESNIKLANAHMNSSE 18
            VS+H QT+LL +VLESNI L  AH+N S+
Sbjct: 341 KVSEHAQTVLLTRVLESNISLGQAHLNKSD 370


>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
           tuberosum]
          Length = 1675

 Score =  159 bits (402), Expect = 1e-36
 Identities = 96/280 (34%), Positives = 156/280 (55%), Gaps = 10/280 (3%)
 Frame = -2

Query: 812 KGDITGAKNLDMAE---CSAWEESDADQTACTSKPSEVRYNNNQNSEQHHWTSLQYSEAM 642
           KGD+ GAK +D       +  EES+    +C      ++ +   N ++  W + Q++EAM
Sbjct: 124 KGDVVGAKMIDALSPDNSTDREESEGSHMSCAMDDLNMQDHREYN-KRPSWDNFQFTEAM 182

Query: 641 SVLDGLLGSKPSACRRCSAKNPRISCPTFGWFYMNMSKASTRANVI-QGVELNESFDDGA 465
           +V+D +L +K   C  C AKNP+I  P+FG F+M++S    R N I  G   N     G+
Sbjct: 183 AVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHMDISNKQIRENYINSGRRFNLHDTGGS 242

Query: 464 EQDVIGEVRHSGVSDSEDMESAGSVYNGTPSPG---KKSRNKGVSGPPSEYLKQSNFFSG 294
           E++   EV    V+ +E +  A +    T + G    K+R +          +Q + FS 
Sbjct: 243 EENPSPEV----VNATEPLGEAETSLCVTSTDGVENSKARKRQGGDQSDVVEQQKDSFSV 298

Query: 293 VLLPSEAKDHMKLVWENENQICSLICDIQQQ--GMTQKRSSYSMFFIEALLVAPVKFRPP 120
             LPS+ +  ++ +WENE  +C+  CDIQ Q    + K +  SMFF++++LV P+KFRPP
Sbjct: 299 AHLPSQVRSIIEHLWENEAPLCTFFCDIQSQHHNTSGKVAGPSMFFLDSILVPPIKFRPP 358

Query: 119 SKGA-MVSDHPQTLLLGKVLESNIKLANAHMNSSEDTRFV 3
           +KG   + +HP T+LLGKV+++NI L NAH+N +  ++ +
Sbjct: 359 AKGGDSIMEHPHTVLLGKVVQANIALGNAHINRAGRSKII 398


>ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arabidopsis lyrata subsp.
           lyrata] gi|297322267|gb|EFH52688.1| hypothetical protein
           ARALYDRAFT_486216 [Arabidopsis lyrata subsp. lyrata]
          Length = 1678

 Score =  152 bits (384), Expect = 1e-34
 Identities = 95/274 (34%), Positives = 144/274 (52%), Gaps = 4/274 (1%)
 Frame = -2

Query: 812 KGDITGAKNLDMAECSAWEESDADQTACTSKPSEVRYNNNQNS--EQHHWTSLQYSEAMS 639
           KGDI  AK L   E +   +SD+   +C S  +       ++S  E   WTSLQ++E  +
Sbjct: 144 KGDIVSAKQL---ESNTPTKSDSSDVSCESGVTTDSSEGCEDSDMEDQRWTSLQFAEVTA 200

Query: 638 VLDGLLGSKPSACRRCSAKNPRISCPTFGWFYMNMSKAS-TRANVIQGVELNESFDDGAE 462
           V+   +     +C RC A NP++  P FGW  M   K S   ANVI+G++L +S      
Sbjct: 201 VMKNFMRLSSKSCNRCKAVNPQLEKPMFGWVRMKAMKGSDIVANVIRGLKLKKS------ 254

Query: 461 QDVIGEVRHSGVSDSEDMESAGSVYNGTPSPGKKSRNKGVSGPPSEYLKQSNFFSGVLLP 282
                    S V + +D + +G         G K   +  +    E+ + +N     LLP
Sbjct: 255 --------TSSVENPDDFDDSGIDALSEVEDGDKETREKSTEVVKEFEEHNNSSKRDLLP 306

Query: 281 SEAKDHMKLVWENENQICSLICDIQQQGMTQKRSSYSMFFIEALLVAPVKFRPPSKGA-M 105
           +E ++ +K +WENE+  CS I D+ Q G   ++  YSMFF+E++LV P+KFRP +KG   
Sbjct: 307 TEVREILKDLWENEHDFCSFIGDLWQSG--SEKIDYSMFFLESVLVPPIKFRPSTKGGDS 364

Query: 104 VSDHPQTLLLGKVLESNIKLANAHMNSSEDTRFV 3
           V +HPQT+ L KVL SNI+L NA  N  + ++ +
Sbjct: 365 VMEHPQTVGLNKVLGSNIQLGNACTNKLDQSKII 398


>ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Capsella rubella]
           gi|482559195|gb|EOA23386.1| hypothetical protein
           CARUB_v10016563mg [Capsella rubella]
          Length = 1651

 Score =  149 bits (375), Expect = 2e-33
 Identities = 95/274 (34%), Positives = 146/274 (53%), Gaps = 4/274 (1%)
 Frame = -2

Query: 812 KGDITGAKNLDMAECSAWEESDADQTACTSKPSEVRYNN--NQNSEQHHWTSLQYSEAMS 639
           KGDI  AK L++   S    S+  + +C S  +        + + E   WTSLQ++E  +
Sbjct: 131 KGDIVSAKQLEVKSDSTSTNSEDIEVSCESGVTNDSSQECEDPDMEDQRWTSLQFAEVTA 190

Query: 638 VLDGLLGSKPSACRRCSAKNPRISCPTFGWFYM-NMSKASTRANVIQGVELNESFDDGAE 462
           V+   +      C +C AKNP++  P FGW  M  M+ ++  AN+I+G+++ +S      
Sbjct: 191 VMKNFMKLTSKECNKCKAKNPKLEKPMFGWVRMKGMNASAVGANLIRGLKVKKSTSSVEN 250

Query: 461 QDVIGEVRHSGVSDSEDMESAGSVYNGTPSPGKKSRNKGVSGPPSEYLKQSNFFSGVLLP 282
            D  G      +S++ED +             K+ R K       E+ KQ +     LLP
Sbjct: 251 PDDSG---IDALSEAEDSD-------------KEKREKSTE-IAKEFEKQKD-TKRDLLP 292

Query: 281 SEAKDHMKLVWENENQICSLICDIQQQGMTQKRSSYSMFFIEALLVAPVKFRPPSKGA-M 105
           SE +  +K +WENE++ CS I D+ Q G   ++  YSMFF+E++LV P+KFRPP+KG   
Sbjct: 293 SEVRAILKNLWENEHEYCSFIGDLWQSG--SEKIDYSMFFLESVLVPPIKFRPPTKGGDS 350

Query: 104 VSDHPQTLLLGKVLESNIKLANAHMNSSEDTRFV 3
           V +HPQT+ L KVL SNI L NA  N  + ++ +
Sbjct: 351 VMEHPQTVGLNKVLLSNITLGNACTNKLDQSKVI 384