BLASTX nr result
ID: Papaver27_contig00041406
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00041406
(1206 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB40470.1| hypothetical protein L484_013773 [Morus notabilis] 201 5e-49
ref|XP_007049519.1| Mediator of RNA polymerase II transcription ... 200 9e-49
ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II tra... 198 3e-48
ref|XP_004510745.1| PREDICTED: mediator of RNA polymerase II tra... 194 5e-47
gb|EYU40679.1| hypothetical protein MIMGU_mgv1a013493mg [Mimulus... 194 6e-47
ref|XP_006469363.1| PREDICTED: mediator of RNA polymerase II tra... 194 8e-47
ref|XP_002532456.1| RNA binding protein, putative [Ricinus commu... 191 4e-46
ref|XP_004290106.1| PREDICTED: mediator of RNA polymerase II tra... 189 2e-45
ref|XP_003528804.1| PREDICTED: mediator of RNA polymerase II tra... 189 2e-45
ref|XP_006384719.1| hypothetical protein POPTR_0004s20480g [Popu... 189 3e-45
ref|XP_003577391.1| PREDICTED: uncharacterized protein LOC100845... 189 3e-45
ref|XP_007199481.1| hypothetical protein PRUPE_ppb009396mg [Prun... 187 6e-45
ref|XP_006344343.1| PREDICTED: mediator of RNA polymerase II tra... 187 1e-44
ref|XP_006344342.1| PREDICTED: mediator of RNA polymerase II tra... 187 1e-44
ref|XP_006344340.1| PREDICTED: mediator of RNA polymerase II tra... 187 1e-44
ref|XP_003548527.1| PREDICTED: mediator of RNA polymerase II tra... 187 1e-44
ref|XP_006664203.1| PREDICTED: mediator of RNA polymerase II tra... 186 2e-44
ref|XP_006664202.1| PREDICTED: mediator of RNA polymerase II tra... 186 2e-44
ref|NP_001132375.1| uncharacterized protein LOC100193821 [Zea ma... 186 2e-44
ref|XP_004246249.1| PREDICTED: mediator of RNA polymerase II tra... 185 3e-44
>gb|EXB40470.1| hypothetical protein L484_013773 [Morus notabilis]
Length = 219
Score = 201 bits (511), Expect = 5e-49
Identities = 112/217 (51%), Positives = 124/217 (57%), Gaps = 11/217 (5%)
Frame = +2
Query: 116 MDSEGKKFGRGPRELTGAVDLINHYKLWAHHDFFCKRSLPLSISDTHYLHSVVGDTEIRK 295
MD E KKFGRGPRELTGAVDLI+HYKL AHHDFFCKRSLPL+I+DTHYLH+VVGDTEIRK
Sbjct: 1 MDPEIKKFGRGPRELTGAVDLISHYKLLAHHDFFCKRSLPLAIADTHYLHNVVGDTEIRK 60
Query: 296 GEGMELDQLCQTTSYTRETKTRIQPFDMDILKQAFLLKETTPIDLPSEEKGIPTIAGXXX 475
GEGM+LDQL Q TSY+R+T RIQPFD+DIL++AF L+ET PIDLP EKGI TIAG
Sbjct: 61 GEGMQLDQLIQNTSYSRDTNARIQPFDLDILQEAFQLRETGPIDLPPAEKGILTIAGKSK 120
Query: 476 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHHD--------- 628
GHHD
Sbjct: 121 SEFKDKERKHKKHKDRDKEKDKEHKKHKHHHKDRSKDKDKDKKKDKSGHHDSGADHTKKH 180
Query: 629 --KKRKHDGGEDTGDXXXXXXXXXXXXXTSEMVGIKV 733
KKRKH+G ED D EM IKV
Sbjct: 181 HEKKRKHEGDEDINDVHRHKKSKHKSSKIDEMGAIKV 217
>ref|XP_007049519.1| Mediator of RNA polymerase II transcription subunit 19 [Theobroma
cacao] gi|508701780|gb|EOX93676.1| Mediator of RNA
polymerase II transcription subunit 19 [Theobroma cacao]
Length = 221
Score = 200 bits (509), Expect = 9e-49
Identities = 93/117 (79%), Positives = 106/117 (90%)
Frame = +2
Query: 116 MDSEGKKFGRGPRELTGAVDLINHYKLWAHHDFFCKRSLPLSISDTHYLHSVVGDTEIRK 295
MD EGKKFG+GPREL+GAVDLI+HYKL HHDFFCKR LPLSISDTHYLH+VVGDTEIRK
Sbjct: 1 MDPEGKKFGKGPRELSGAVDLISHYKLLPHHDFFCKRPLPLSISDTHYLHNVVGDTEIRK 60
Query: 296 GEGMELDQLCQTTSYTRETKTRIQPFDMDILKQAFLLKETTPIDLPSEEKGIPTIAG 466
GEGM+LDQL Q TS+ R+T RIQPFD+DILK+AF L+E+TP++LPS EKGIPTIAG
Sbjct: 61 GEGMQLDQLIQNTSHNRDTNARIQPFDLDILKEAFQLRESTPVELPSSEKGIPTIAG 117
>ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like [Cucumis sativus]
gi|449502064|ref|XP_004161533.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 19a-like
[Cucumis sativus]
Length = 219
Score = 198 bits (504), Expect = 3e-48
Identities = 110/217 (50%), Positives = 122/217 (56%), Gaps = 11/217 (5%)
Frame = +2
Query: 116 MDSEGKKFGRGPRELTGAVDLINHYKLWAHHDFFCKRSLPLSISDTHYLHSVVGDTEIRK 295
M+SE KKFGRGPRELTGAVDLI+HYKL HHDFFCK+SLPLSISDTHYLH+VVGDTEIRK
Sbjct: 1 MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRK 60
Query: 296 GEGMELDQLCQTTSYTRETKTRIQPFDMDILKQAFLLKETTPIDLPSEEKGIPTIAGXXX 475
GEGM+L+QL Q TSY RET RIQPFD DIL +AF L+ET P+DLPS EKG+PTI G
Sbjct: 61 GEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSK 120
Query: 476 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGH----------- 622
GH
Sbjct: 121 SESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKH 180
Query: 623 HDKKRKHDGGEDTGDXXXXXXXXXXXXXTSEMVGIKV 733
H+KKRKHDG +D D EM IKV
Sbjct: 181 HEKKRKHDGEDDINDIHRHKKSKHKASKIEEMGVIKV 217
>ref|XP_004510745.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like, partial [Cicer arietinum]
Length = 184
Score = 194 bits (494), Expect = 5e-47
Identities = 91/117 (77%), Positives = 105/117 (89%)
Frame = +2
Query: 116 MDSEGKKFGRGPRELTGAVDLINHYKLWAHHDFFCKRSLPLSISDTHYLHSVVGDTEIRK 295
MD EGKKFG GPRELTGAVDLINH+KL H++FFCKR LP+SI+DTHYLH+VVGDTEIRK
Sbjct: 1 MDPEGKKFGGGPRELTGAVDLINHFKLIPHYEFFCKRPLPVSIADTHYLHNVVGDTEIRK 60
Query: 296 GEGMELDQLCQTTSYTRETKTRIQPFDMDILKQAFLLKETTPIDLPSEEKGIPTIAG 466
G+GM+LDQL Q TS+ R+T RIQPFD+DILK+AF L+ETTPIDLP+ EKGIPTIAG
Sbjct: 61 GDGMQLDQLIQNTSFFRDTSARIQPFDLDILKEAFQLRETTPIDLPAAEKGIPTIAG 117
>gb|EYU40679.1| hypothetical protein MIMGU_mgv1a013493mg [Mimulus guttatus]
Length = 219
Score = 194 bits (493), Expect = 6e-47
Identities = 107/217 (49%), Positives = 120/217 (55%), Gaps = 11/217 (5%)
Frame = +2
Query: 116 MDSEGKKFGRGPRELTGAVDLINHYKLWAHHDFFCKRSLPLSISDTHYLHSVVGDTEIRK 295
MD + KKFGRGPRELTGAVDLI+HYKL HHDFFCK+ LPLSISDTHYLH+VVGDTEIRK
Sbjct: 1 MDPDYKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKPLPLSISDTHYLHNVVGDTEIRK 60
Query: 296 GEGMELDQLCQTTSYTRETKTRIQPFDMDILKQAFLLKETTPIDLPSEEKGIPTIAGXXX 475
GEGM+L QL Q +RET TRIQPFD+DIL++AF L+ET P+DLP EKG PTIAG
Sbjct: 61 GEGMQLSQLIQDKPLSRETSTRIQPFDLDILREAFQLRETAPVDLPPSEKGTPTIAGKSK 120
Query: 476 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGH----------- 622
GH
Sbjct: 121 SESKDKEKKHKKHKDKDRDKDKEHKKHKHRHKDRSKDKDKEKKKDKSGHHESGNDHSKRH 180
Query: 623 HDKKRKHDGGEDTGDXXXXXXXXXXXXXTSEMVGIKV 733
H+KKRKHDG E+ D EM GIKV
Sbjct: 181 HEKKRKHDGDEEGNDIHKHKKSKHKSSKIDEMGGIKV 217
>ref|XP_006469363.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like isoform X1 [Citrus sinensis]
gi|568830137|ref|XP_006469364.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 19a-like isoform
X2 [Citrus sinensis] gi|568830139|ref|XP_006469365.1|
PREDICTED: mediator of RNA polymerase II transcription
subunit 19a-like isoform X3 [Citrus sinensis]
gi|568830141|ref|XP_006469366.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 19a-like isoform
X4 [Citrus sinensis]
Length = 219
Score = 194 bits (492), Expect = 8e-47
Identities = 91/117 (77%), Positives = 104/117 (88%)
Frame = +2
Query: 116 MDSEGKKFGRGPRELTGAVDLINHYKLWAHHDFFCKRSLPLSISDTHYLHSVVGDTEIRK 295
MD EGK FGRGPRELTGAVDLI+HYKL HHDFFCKRSLPLSISDTHYLH+VVGDTEIRK
Sbjct: 1 MDPEGKNFGRGPRELTGAVDLISHYKLLPHHDFFCKRSLPLSISDTHYLHNVVGDTEIRK 60
Query: 296 GEGMELDQLCQTTSYTRETKTRIQPFDMDILKQAFLLKETTPIDLPSEEKGIPTIAG 466
GEGM+LDQL Q TS R+T RIQPFD+D+L++AF L+ET+P+DLP EKG+PT+AG
Sbjct: 61 GEGMQLDQLIQNTS--RDTSARIQPFDLDVLREAFQLRETSPVDLPPAEKGVPTLAG 115
>ref|XP_002532456.1| RNA binding protein, putative [Ricinus communis]
gi|223527846|gb|EEF29942.1| RNA binding protein,
putative [Ricinus communis]
Length = 221
Score = 191 bits (486), Expect = 4e-46
Identities = 89/116 (76%), Positives = 103/116 (88%)
Frame = +2
Query: 116 MDSEGKKFGRGPRELTGAVDLINHYKLWAHHDFFCKRSLPLSISDTHYLHSVVGDTEIRK 295
MD E KKFG GPRELTGAVDLI+H+KL HH+FFCKRSLPLSISDTHYLH+VVGD+EIRK
Sbjct: 1 MDPESKKFGSGPRELTGAVDLISHFKLVPHHEFFCKRSLPLSISDTHYLHNVVGDSEIRK 60
Query: 296 GEGMELDQLCQTTSYTRETKTRIQPFDMDILKQAFLLKETTPIDLPSEEKGIPTIA 463
G+GM+LDQL Q TSY+R++ RIQPFD+D+L++AF LKETTPIDLP EKG PTIA
Sbjct: 61 GDGMQLDQLIQNTSYSRDSNARIQPFDLDVLREAFQLKETTPIDLPPAEKGTPTIA 116
>ref|XP_004290106.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like [Fragaria vesca subsp. vesca]
Length = 218
Score = 189 bits (480), Expect = 2e-45
Identities = 89/117 (76%), Positives = 104/117 (88%)
Frame = +2
Query: 116 MDSEGKKFGRGPRELTGAVDLINHYKLWAHHDFFCKRSLPLSISDTHYLHSVVGDTEIRK 295
MD EG KFGRGPRELTGAVDLI HYKL AHH+FFCKRSLP+SISDTHY+++VVGDTEIRK
Sbjct: 1 MDPEGAKFGRGPRELTGAVDLITHYKLHAHHEFFCKRSLPVSISDTHYIYNVVGDTEIRK 60
Query: 296 GEGMELDQLCQTTSYTRETKTRIQPFDMDILKQAFLLKETTPIDLPSEEKGIPTIAG 466
GEGM+LDQL Q+T Y+R+TK RIQPFD+D L++AF KET P+DLP+ +KG PTIAG
Sbjct: 61 GEGMQLDQLIQST-YSRDTKPRIQPFDLDSLREAFQFKETAPVDLPAADKGTPTIAG 116
>ref|XP_003528804.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like [Glycine max]
Length = 223
Score = 189 bits (480), Expect = 2e-45
Identities = 88/117 (75%), Positives = 104/117 (88%)
Frame = +2
Query: 116 MDSEGKKFGRGPRELTGAVDLINHYKLWAHHDFFCKRSLPLSISDTHYLHSVVGDTEIRK 295
MD EGKKFG GPRELTGAVDLI+H+KL H++FFCKRSLP+SI+DTHYLH+VVGDTEIRK
Sbjct: 1 MDPEGKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRSLPVSIADTHYLHNVVGDTEIRK 60
Query: 296 GEGMELDQLCQTTSYTRETKTRIQPFDMDILKQAFLLKETTPIDLPSEEKGIPTIAG 466
G+GM+L+QL Q TS R+T RIQPFD+D+LK+AF L+ET PIDLP+ EKGIPTIAG
Sbjct: 61 GDGMQLEQLIQNTSSFRDTNARIQPFDLDVLKEAFQLRETAPIDLPAAEKGIPTIAG 117
>ref|XP_006384719.1| hypothetical protein POPTR_0004s20480g [Populus trichocarpa]
gi|566167587|ref|XP_006384720.1| hypothetical protein
POPTR_0004s20480g [Populus trichocarpa]
gi|550341487|gb|ERP62516.1| hypothetical protein
POPTR_0004s20480g [Populus trichocarpa]
gi|550341488|gb|ERP62517.1| hypothetical protein
POPTR_0004s20480g [Populus trichocarpa]
Length = 221
Score = 189 bits (479), Expect = 3e-45
Identities = 90/117 (76%), Positives = 103/117 (88%)
Frame = +2
Query: 116 MDSEGKKFGRGPRELTGAVDLINHYKLWAHHDFFCKRSLPLSISDTHYLHSVVGDTEIRK 295
MD E KKFGRGPRELTGAVDLI+H+KL HH+FFCKRSLPLSI+DTHYLH+VVGDTEIRK
Sbjct: 1 MDPESKKFGRGPRELTGAVDLISHFKLLPHHEFFCKRSLPLSIADTHYLHNVVGDTEIRK 60
Query: 296 GEGMELDQLCQTTSYTRETKTRIQPFDMDILKQAFLLKETTPIDLPSEEKGIPTIAG 466
GEGM+LDQL Q TS R++ I+PFD+D+L++AF LKETTPIDLPS EKG PTIAG
Sbjct: 61 GEGMQLDQLIQNTS--RDSNAHIEPFDLDVLREAFQLKETTPIDLPSAEKGTPTIAG 115
>ref|XP_003577391.1| PREDICTED: uncharacterized protein LOC100845126 [Brachypodium
distachyon]
Length = 205
Score = 189 bits (479), Expect = 3e-45
Identities = 99/184 (53%), Positives = 113/184 (61%)
Frame = +2
Query: 116 MDSEGKKFGRGPRELTGAVDLINHYKLWAHHDFFCKRSLPLSISDTHYLHSVVGDTEIRK 295
MD +GKKFG GPRELTGAVDLI+ YKL HHDFFCKR LPL+ISDTHYLH+VVGDTEIRK
Sbjct: 1 MDPDGKKFGTGPRELTGAVDLISQYKLQPHHDFFCKRPLPLAISDTHYLHNVVGDTEIRK 60
Query: 296 GEGMELDQLCQTTSYTRETKTRIQPFDMDILKQAFLLKETTPIDLPSEEKGIPTIAGXXX 475
GEGMELDQL Q +Y R+ IQPFDM+ L QAF L+ET P+DLPS EKG+PTI+G
Sbjct: 61 GEGMELDQLIQ-NAYLRDKPAYIQPFDMETLGQAFQLRETAPVDLPSAEKGVPTISGKSK 119
Query: 476 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHHDKKRKHDGGE 655
GHH+KKRKH+G E
Sbjct: 120 SESKDKEKKHKKHKDRDKDKEHKKHKHRHKDRSKDKDKDKDKKKDKSGHHEKKRKHEGME 179
Query: 656 DTGD 667
D+ D
Sbjct: 180 DSVD 183
>ref|XP_007199481.1| hypothetical protein PRUPE_ppb009396mg [Prunus persica]
gi|462394881|gb|EMJ00680.1| hypothetical protein
PRUPE_ppb009396mg [Prunus persica]
Length = 217
Score = 187 bits (476), Expect = 6e-45
Identities = 105/217 (48%), Positives = 122/217 (56%), Gaps = 11/217 (5%)
Frame = +2
Query: 116 MDSEGKKFGRGPRELTGAVDLINHYKLWAHHDFFCKRSLPLSISDTHYLHSVVGDTEIRK 295
MD EG KFG+GP+ELTGAVDLI+HYKL HH+FFCKRSLP+SISDTHYLH+VVGDTEIRK
Sbjct: 1 MDPEGTKFGQGPKELTGAVDLISHYKLLPHHEFFCKRSLPVSISDTHYLHNVVGDTEIRK 60
Query: 296 GEGMELDQLCQTTSYTRETKTRIQPFDMDILKQAFLLKETTPIDLPSEEKGIPTIAGXXX 475
G+GM+LDQL Q+TSY +K RIQPFD+DIL++AF L+ET PIDLP +KGIPTIA
Sbjct: 61 GDGMQLDQLIQSTSYF--SKPRIQPFDLDILREAFHLRETAPIDLPLADKGIPTIAAKSK 118
Query: 476 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGH----------- 622
GH
Sbjct: 119 SESKDKEKKHKKHKDRDKEKDKEHKKHKRRHKDRSKDKDKEKKKEKSGHHESTGDHSKKH 178
Query: 623 HDKKRKHDGGEDTGDXXXXXXXXXXXXXTSEMVGIKV 733
H+KKRKHDG ED D EM I+V
Sbjct: 179 HEKKRKHDGDEDLNDVHRHKKSKHKSAKIDEMGAIRV 215
>ref|XP_006344343.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like isoform X4 [Solanum tuberosum]
Length = 218
Score = 187 bits (474), Expect = 1e-44
Identities = 86/117 (73%), Positives = 101/117 (86%)
Frame = +2
Query: 116 MDSEGKKFGRGPRELTGAVDLINHYKLWAHHDFFCKRSLPLSISDTHYLHSVVGDTEIRK 295
MD + K+FGRGPRELTGAVDLI+H+KL H +FFCKRSLPLSISDTHYLH+VVGDTEIRK
Sbjct: 1 MDPDNKRFGRGPRELTGAVDLISHFKLLPHQEFFCKRSLPLSISDTHYLHNVVGDTEIRK 60
Query: 296 GEGMELDQLCQTTSYTRETKTRIQPFDMDILKQAFLLKETTPIDLPSEEKGIPTIAG 466
GEGM+LDQL Q TS +RET +RIQPFD+D+L + F L+E P+DLP EKGIPT+AG
Sbjct: 61 GEGMQLDQLIQDTSLSRETSSRIQPFDLDVLGEVFRLREAAPVDLPPSEKGIPTVAG 117
>ref|XP_006344342.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like isoform X3 [Solanum tuberosum]
Length = 219
Score = 187 bits (474), Expect = 1e-44
Identities = 86/117 (73%), Positives = 101/117 (86%)
Frame = +2
Query: 116 MDSEGKKFGRGPRELTGAVDLINHYKLWAHHDFFCKRSLPLSISDTHYLHSVVGDTEIRK 295
MD + K+FGRGPRELTGAVDLI+H+KL H +FFCKRSLPLSISDTHYLH+VVGDTEIRK
Sbjct: 1 MDPDNKRFGRGPRELTGAVDLISHFKLLPHQEFFCKRSLPLSISDTHYLHNVVGDTEIRK 60
Query: 296 GEGMELDQLCQTTSYTRETKTRIQPFDMDILKQAFLLKETTPIDLPSEEKGIPTIAG 466
GEGM+LDQL Q TS +RET +RIQPFD+D+L + F L+E P+DLP EKGIPT+AG
Sbjct: 61 GEGMQLDQLIQDTSLSRETSSRIQPFDLDVLGEVFRLREAAPVDLPPSEKGIPTVAG 117
>ref|XP_006344340.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like isoform X1 [Solanum tuberosum]
gi|565354889|ref|XP_006344341.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 19a-like isoform
X2 [Solanum tuberosum]
Length = 220
Score = 187 bits (474), Expect = 1e-44
Identities = 86/117 (73%), Positives = 101/117 (86%)
Frame = +2
Query: 116 MDSEGKKFGRGPRELTGAVDLINHYKLWAHHDFFCKRSLPLSISDTHYLHSVVGDTEIRK 295
MD + K+FGRGPRELTGAVDLI+H+KL H +FFCKRSLPLSISDTHYLH+VVGDTEIRK
Sbjct: 1 MDPDNKRFGRGPRELTGAVDLISHFKLLPHQEFFCKRSLPLSISDTHYLHNVVGDTEIRK 60
Query: 296 GEGMELDQLCQTTSYTRETKTRIQPFDMDILKQAFLLKETTPIDLPSEEKGIPTIAG 466
GEGM+LDQL Q TS +RET +RIQPFD+D+L + F L+E P+DLP EKGIPT+AG
Sbjct: 61 GEGMQLDQLIQDTSLSRETSSRIQPFDLDVLGEVFRLREAAPVDLPPSEKGIPTVAG 117
>ref|XP_003548527.1| PREDICTED: mediator of RNA polymerase II transcription subunit 19a
isoform X1 [Glycine max]
gi|571525134|ref|XP_006598920.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 19a isoform X2
[Glycine max] gi|571525137|ref|XP_006598921.1|
PREDICTED: mediator of RNA polymerase II transcription
subunit 19a isoform X3 [Glycine max]
Length = 222
Score = 187 bits (474), Expect = 1e-44
Identities = 88/117 (75%), Positives = 104/117 (88%)
Frame = +2
Query: 116 MDSEGKKFGRGPRELTGAVDLINHYKLWAHHDFFCKRSLPLSISDTHYLHSVVGDTEIRK 295
MD EGKKFG GPRELTGAVDLI+H+KL H++FFCKR LP+SI+DTHYLH+VVGDTEIRK
Sbjct: 1 MDPEGKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRPLPVSIADTHYLHNVVGDTEIRK 60
Query: 296 GEGMELDQLCQTTSYTRETKTRIQPFDMDILKQAFLLKETTPIDLPSEEKGIPTIAG 466
G+GM+LDQL Q TS+ R+T RIQPFD+D+LK+AF L+ET PIDLP+ EKGIPTIAG
Sbjct: 61 GDGMQLDQLIQNTSF-RDTNARIQPFDLDVLKEAFQLRETAPIDLPAAEKGIPTIAG 116
>ref|XP_006664203.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like isoform X2 [Oryza brachyantha]
Length = 214
Score = 186 bits (472), Expect = 2e-44
Identities = 90/117 (76%), Positives = 101/117 (86%)
Frame = +2
Query: 116 MDSEGKKFGRGPRELTGAVDLINHYKLWAHHDFFCKRSLPLSISDTHYLHSVVGDTEIRK 295
MDS+ KKFG+GPRELTGAVDLI+HYKL AHHDFFCKR LPL+ISDTHYLH+VVGDTEIRK
Sbjct: 1 MDSDDKKFGKGPRELTGAVDLISHYKLLAHHDFFCKRPLPLAISDTHYLHNVVGDTEIRK 60
Query: 296 GEGMELDQLCQTTSYTRETKTRIQPFDMDILKQAFLLKETTPIDLPSEEKGIPTIAG 466
GEGMELDQL Q +Y R+ IQPFDM+ L QAF L+ET P+DLPS EKGIPTI+G
Sbjct: 61 GEGMELDQLVQ-NAYLRDKPAYIQPFDMETLGQAFQLRETAPVDLPSAEKGIPTISG 116
>ref|XP_006664202.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like isoform X1 [Oryza brachyantha]
Length = 264
Score = 186 bits (472), Expect = 2e-44
Identities = 90/117 (76%), Positives = 101/117 (86%)
Frame = +2
Query: 116 MDSEGKKFGRGPRELTGAVDLINHYKLWAHHDFFCKRSLPLSISDTHYLHSVVGDTEIRK 295
MDS+ KKFG+GPRELTGAVDLI+HYKL AHHDFFCKR LPL+ISDTHYLH+VVGDTEIRK
Sbjct: 1 MDSDDKKFGKGPRELTGAVDLISHYKLLAHHDFFCKRPLPLAISDTHYLHNVVGDTEIRK 60
Query: 296 GEGMELDQLCQTTSYTRETKTRIQPFDMDILKQAFLLKETTPIDLPSEEKGIPTIAG 466
GEGMELDQL Q +Y R+ IQPFDM+ L QAF L+ET P+DLPS EKGIPTI+G
Sbjct: 61 GEGMELDQLVQ-NAYLRDKPAYIQPFDMETLGQAFQLRETAPVDLPSAEKGIPTISG 116
>ref|NP_001132375.1| uncharacterized protein LOC100193821 [Zea mays]
gi|195655369|gb|ACG47152.1| hypothetical protein [Zea
mays]
Length = 205
Score = 186 bits (472), Expect = 2e-44
Identities = 101/201 (50%), Positives = 115/201 (57%)
Frame = +2
Query: 116 MDSEGKKFGRGPRELTGAVDLINHYKLWAHHDFFCKRSLPLSISDTHYLHSVVGDTEIRK 295
MDS+ KKFG GPRELTGAVDLI+HYKL HHDFFCK+ LPL+ISDTHYLH+VVGDTEIRK
Sbjct: 1 MDSDDKKFGNGPRELTGAVDLISHYKLLPHHDFFCKKPLPLAISDTHYLHNVVGDTEIRK 60
Query: 296 GEGMELDQLCQTTSYTRETKTRIQPFDMDILKQAFLLKETTPIDLPSEEKGIPTIAGXXX 475
GEGMELDQL +Y R+ IQPFDM+ L QAF L+ET +DLPS EKGIPTI+G
Sbjct: 61 GEGMELDQLVH-NAYLRDKPAYIQPFDMETLGQAFQLRETALVDLPSTEKGIPTISGKPK 119
Query: 476 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHHDKKRKHDGGE 655
GHH+KKRKH+G E
Sbjct: 120 SESKDKEKKHKRHKDKDKEHKKHKHRHKDRSKDKDKDKDKDKKKDKSGHHEKKRKHEGTE 179
Query: 656 DTGDXXXXXXXXXXXXXTSEM 718
D+ D T EM
Sbjct: 180 DSVDVHKHKKSKHKSSKTDEM 200
>ref|XP_004246249.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like isoform 2 [Solanum lycopersicum]
Length = 186
Score = 185 bits (470), Expect = 3e-44
Identities = 86/117 (73%), Positives = 101/117 (86%)
Frame = +2
Query: 116 MDSEGKKFGRGPRELTGAVDLINHYKLWAHHDFFCKRSLPLSISDTHYLHSVVGDTEIRK 295
MD + K+FGRGPRELTGAVDLI+H+KL H +FFCKRSLPLSISDTHYLH+VVGDTEIRK
Sbjct: 1 MDPDNKRFGRGPRELTGAVDLISHFKLLPHQEFFCKRSLPLSISDTHYLHNVVGDTEIRK 60
Query: 296 GEGMELDQLCQTTSYTRETKTRIQPFDMDILKQAFLLKETTPIDLPSEEKGIPTIAG 466
GEGM+LDQL Q TS +RET + IQPFD+D+L +AF L+E P+DLP EKGIPT+AG
Sbjct: 61 GEGMQLDQLIQDTSLSRETSSCIQPFDLDVLGEAFRLREAAPVDLPPSEKGIPTVAG 117