BLASTX nr result

ID: Papaver27_contig00040998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00040998
         (427 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis th...    55   8e-06
ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citr...    55   8e-06
ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citr...    55   8e-06
ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citr...    55   8e-06
ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citr...    55   8e-06
ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citr...    55   8e-06
gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]     55   8e-06
ref|NP_190914.1| chloroplast RNA-binding protein 29 [Arabidopsis...    55   1e-05
dbj|BAA06519.1| RNA-binding protein cp29 [Arabidopsis thaliana]        55   1e-05
dbj|BAA06518.1| RNA-binding protein cp29 [Arabidopsis thaliana]        55   1e-05
ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Caps...    55   1e-05
ref|XP_006291486.1| hypothetical protein CARUB_v10017634mg [Caps...    55   1e-05
ref|NP_001190079.1| chloroplast RNA-binding protein 29 [Arabidop...    55   1e-05
ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arab...    55   1e-05
ref|XP_002877921.1| hypothetical protein ARALYDRAFT_348440 [Arab...    55   1e-05

>ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis thaliana]
           gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName:
           Full=Ribonucleoprotein At2g37220, chloroplastic; Flags:
           Precursor gi|13877809|gb|AAK43982.1|AF370167_1 putative
           RNA-binding protein [Arabidopsis thaliana]
           gi|4056477|gb|AAC98043.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|15081717|gb|AAK82513.1|
           At2g37220/F3G5.1 [Arabidopsis thaliana]
           gi|16323482|gb|AAL15235.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|20197716|gb|AAM15222.1|
           putative RNA-binding protein [Arabidopsis thaliana]
           gi|330254275|gb|AEC09369.1| chloroplast RNA binding
           protein [Arabidopsis thaliana]
          Length = 289

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = -1

Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
           A++ +L  +AGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 105 AQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVT 138


>ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|568855826|ref|XP_006481497.1| PREDICTED:
           ribonucleoprotein At2g37220, chloroplastic-like [Citrus
           sinensis] gi|557530828|gb|ESR42011.1| hypothetical
           protein CICLE_v10012331mg [Citrus clementina]
          Length = 282

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = -1

Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
           A++  L  TAGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 108 AQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVT 141


>ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|557530827|gb|ESR42010.1| hypothetical protein
           CICLE_v10012331mg [Citrus clementina]
          Length = 266

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = -1

Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
           A++  L  TAGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 108 AQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVT 141


>ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|557530826|gb|ESR42009.1| hypothetical protein
           CICLE_v10012331mg [Citrus clementina]
          Length = 263

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = -1

Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
           A++  L  TAGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 108 AQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVT 141


>ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|557530825|gb|ESR42008.1| hypothetical protein
           CICLE_v10012331mg [Citrus clementina]
          Length = 271

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = -1

Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
           A++  L  TAGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 108 AQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVT 141


>ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|557530824|gb|ESR42007.1| hypothetical protein
           CICLE_v10012331mg [Citrus clementina]
          Length = 297

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = -1

Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
           A++  L  TAGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 108 AQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVT 141


>gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
          Length = 289

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = -1

Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
           A++ +L  +AGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 105 AQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVT 138


>ref|NP_190914.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
           gi|186511018|ref|NP_850692.2| chloroplast RNA-binding
           protein 29 [Arabidopsis thaliana]
           gi|334185948|ref|NP_001190078.1| chloroplast RNA-binding
           protein 29 [Arabidopsis thaliana]
           gi|30316379|sp|Q43349.2|ROC2_ARATH RecName: Full=29 kDa
           ribonucleoprotein, chloroplastic; AltName:
           Full=RNA-binding protein cp29; Flags: Precursor
           gi|6729497|emb|CAB67653.1| RNA-binding protein cp29
           protein [Arabidopsis thaliana]
           gi|14532570|gb|AAK64013.1| AT3g53460/F4P12_160
           [Arabidopsis thaliana] gi|18655393|gb|AAL76152.1|
           AT3g53460/F4P12_160 [Arabidopsis thaliana]
           gi|21593426|gb|AAM65393.1| RNA-binding protein cp29
           protein [Arabidopsis thaliana]
           gi|332645568|gb|AEE79089.1| chloroplast RNA-binding
           protein 29 [Arabidopsis thaliana]
           gi|332645569|gb|AEE79090.1| chloroplast RNA-binding
           protein 29 [Arabidopsis thaliana]
           gi|332645570|gb|AEE79091.1| chloroplast RNA-binding
           protein 29 [Arabidopsis thaliana]
          Length = 342

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = -1

Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
           A++ +L  +AGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 113 AQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVT 146


>dbj|BAA06519.1| RNA-binding protein cp29 [Arabidopsis thaliana]
          Length = 326

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = -1

Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
           A++ +L  +AGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 105 AQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVT 138


>dbj|BAA06518.1| RNA-binding protein cp29 [Arabidopsis thaliana]
          Length = 334

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = -1

Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
           A++ +L  +AGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 113 AQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVT 146


>ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Capsella rubella]
           gi|482563453|gb|EOA27643.1| hypothetical protein
           CARUB_v10023790mg [Capsella rubella]
          Length = 284

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = -1

Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
           A++ +L  +AGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 104 AQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVT 137


>ref|XP_006291486.1| hypothetical protein CARUB_v10017634mg [Capsella rubella]
           gi|482560193|gb|EOA24384.1| hypothetical protein
           CARUB_v10017634mg [Capsella rubella]
          Length = 327

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = -1

Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
           A++ +L  +AGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 107 AQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVT 140


>ref|NP_001190079.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
           gi|332645571|gb|AEE79092.1| chloroplast RNA-binding
           protein 29 [Arabidopsis thaliana]
          Length = 363

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = -1

Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
           A++ +L  +AGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 113 AQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVT 146


>ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
           lyrata] gi|297327336|gb|EFH57756.1| hypothetical protein
           ARALYDRAFT_482714 [Arabidopsis lyrata subsp. lyrata]
          Length = 289

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = -1

Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
           A++ +L  +AGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 105 AQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVT 138


>ref|XP_002877921.1| hypothetical protein ARALYDRAFT_348440 [Arabidopsis lyrata subsp.
           lyrata] gi|297323759|gb|EFH54180.1| hypothetical protein
           ARALYDRAFT_348440 [Arabidopsis lyrata subsp. lyrata]
          Length = 339

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = -1

Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
           A++ +L  +AGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 113 AQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVT 146


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