BLASTX nr result
ID: Papaver27_contig00040998
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00040998
(427 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis th... 55 8e-06
ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citr... 55 8e-06
ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citr... 55 8e-06
ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citr... 55 8e-06
ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citr... 55 8e-06
ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citr... 55 8e-06
gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana] 55 8e-06
ref|NP_190914.1| chloroplast RNA-binding protein 29 [Arabidopsis... 55 1e-05
dbj|BAA06519.1| RNA-binding protein cp29 [Arabidopsis thaliana] 55 1e-05
dbj|BAA06518.1| RNA-binding protein cp29 [Arabidopsis thaliana] 55 1e-05
ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Caps... 55 1e-05
ref|XP_006291486.1| hypothetical protein CARUB_v10017634mg [Caps... 55 1e-05
ref|NP_001190079.1| chloroplast RNA-binding protein 29 [Arabidop... 55 1e-05
ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arab... 55 1e-05
ref|XP_002877921.1| hypothetical protein ARALYDRAFT_348440 [Arab... 55 1e-05
>ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis thaliana]
gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName:
Full=Ribonucleoprotein At2g37220, chloroplastic; Flags:
Precursor gi|13877809|gb|AAK43982.1|AF370167_1 putative
RNA-binding protein [Arabidopsis thaliana]
gi|4056477|gb|AAC98043.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|15081717|gb|AAK82513.1|
At2g37220/F3G5.1 [Arabidopsis thaliana]
gi|16323482|gb|AAL15235.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|20197716|gb|AAM15222.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|330254275|gb|AEC09369.1| chloroplast RNA binding
protein [Arabidopsis thaliana]
Length = 289
Score = 55.5 bits (132), Expect = 8e-06
Identities = 25/34 (73%), Positives = 31/34 (91%)
Frame = -1
Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
A++ +L +AGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 105 AQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVT 138
>ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|568855826|ref|XP_006481497.1| PREDICTED:
ribonucleoprotein At2g37220, chloroplastic-like [Citrus
sinensis] gi|557530828|gb|ESR42011.1| hypothetical
protein CICLE_v10012331mg [Citrus clementina]
Length = 282
Score = 55.5 bits (132), Expect = 8e-06
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = -1
Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
A++ L TAGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 108 AQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVT 141
>ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530827|gb|ESR42010.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 266
Score = 55.5 bits (132), Expect = 8e-06
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = -1
Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
A++ L TAGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 108 AQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVT 141
>ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530826|gb|ESR42009.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 263
Score = 55.5 bits (132), Expect = 8e-06
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = -1
Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
A++ L TAGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 108 AQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVT 141
>ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530825|gb|ESR42008.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 271
Score = 55.5 bits (132), Expect = 8e-06
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = -1
Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
A++ L TAGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 108 AQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVT 141
>ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530824|gb|ESR42007.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 297
Score = 55.5 bits (132), Expect = 8e-06
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = -1
Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
A++ L TAGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 108 AQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVT 141
>gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 289
Score = 55.5 bits (132), Expect = 8e-06
Identities = 25/34 (73%), Positives = 31/34 (91%)
Frame = -1
Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
A++ +L +AGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 105 AQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVT 138
>ref|NP_190914.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|186511018|ref|NP_850692.2| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
gi|334185948|ref|NP_001190078.1| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
gi|30316379|sp|Q43349.2|ROC2_ARATH RecName: Full=29 kDa
ribonucleoprotein, chloroplastic; AltName:
Full=RNA-binding protein cp29; Flags: Precursor
gi|6729497|emb|CAB67653.1| RNA-binding protein cp29
protein [Arabidopsis thaliana]
gi|14532570|gb|AAK64013.1| AT3g53460/F4P12_160
[Arabidopsis thaliana] gi|18655393|gb|AAL76152.1|
AT3g53460/F4P12_160 [Arabidopsis thaliana]
gi|21593426|gb|AAM65393.1| RNA-binding protein cp29
protein [Arabidopsis thaliana]
gi|332645568|gb|AEE79089.1| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
gi|332645569|gb|AEE79090.1| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
gi|332645570|gb|AEE79091.1| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
Length = 342
Score = 55.1 bits (131), Expect = 1e-05
Identities = 25/34 (73%), Positives = 31/34 (91%)
Frame = -1
Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
A++ +L +AGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 113 AQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVT 146
>dbj|BAA06519.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 326
Score = 55.1 bits (131), Expect = 1e-05
Identities = 25/34 (73%), Positives = 31/34 (91%)
Frame = -1
Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
A++ +L +AGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 105 AQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVT 138
>dbj|BAA06518.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 334
Score = 55.1 bits (131), Expect = 1e-05
Identities = 25/34 (73%), Positives = 31/34 (91%)
Frame = -1
Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
A++ +L +AGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 113 AQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVT 146
>ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Capsella rubella]
gi|482563453|gb|EOA27643.1| hypothetical protein
CARUB_v10023790mg [Capsella rubella]
Length = 284
Score = 55.1 bits (131), Expect = 1e-05
Identities = 25/34 (73%), Positives = 31/34 (91%)
Frame = -1
Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
A++ +L +AGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 104 AQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVT 137
>ref|XP_006291486.1| hypothetical protein CARUB_v10017634mg [Capsella rubella]
gi|482560193|gb|EOA24384.1| hypothetical protein
CARUB_v10017634mg [Capsella rubella]
Length = 327
Score = 55.1 bits (131), Expect = 1e-05
Identities = 25/34 (73%), Positives = 31/34 (91%)
Frame = -1
Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
A++ +L +AGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 107 AQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVT 140
>ref|NP_001190079.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645571|gb|AEE79092.1| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
Length = 363
Score = 55.1 bits (131), Expect = 1e-05
Identities = 25/34 (73%), Positives = 31/34 (91%)
Frame = -1
Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
A++ +L +AGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 113 AQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVT 146
>ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
lyrata] gi|297327336|gb|EFH57756.1| hypothetical protein
ARALYDRAFT_482714 [Arabidopsis lyrata subsp. lyrata]
Length = 289
Score = 55.1 bits (131), Expect = 1e-05
Identities = 25/34 (73%), Positives = 31/34 (91%)
Frame = -1
Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
A++ +L +AGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 105 AQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVT 138
>ref|XP_002877921.1| hypothetical protein ARALYDRAFT_348440 [Arabidopsis lyrata subsp.
lyrata] gi|297323759|gb|EFH54180.1| hypothetical protein
ARALYDRAFT_348440 [Arabidopsis lyrata subsp. lyrata]
Length = 339
Score = 55.1 bits (131), Expect = 1e-05
Identities = 25/34 (73%), Positives = 31/34 (91%)
Frame = -1
Query: 103 AEVVRLLLTAGNVQMVEVIYDKLTGRSRGFGFVT 2
A++ +L +AGNV+MVEVIYDK+TGRSRGFGFVT
Sbjct: 113 AQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVT 146