BLASTX nr result
ID: Papaver27_contig00040734
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00040734
(891 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI22850.3| unnamed protein product [Vitis vinifera] 348 2e-93
ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containi... 348 2e-93
ref|XP_006338000.1| PREDICTED: pentatricopeptide repeat-containi... 333 4e-89
ref|XP_004229098.1| PREDICTED: pentatricopeptide repeat-containi... 326 6e-87
ref|XP_004295051.1| PREDICTED: pentatricopeptide repeat-containi... 326 8e-87
ref|XP_002314968.2| pentatricopeptide repeat-containing family p... 325 2e-86
ref|XP_006488802.1| PREDICTED: pentatricopeptide repeat-containi... 324 3e-86
ref|XP_006419330.1| hypothetical protein CICLE_v10004501mg [Citr... 323 4e-86
ref|XP_002519267.1| pentatricopeptide repeat-containing protein,... 323 4e-86
ref|XP_004498194.1| PREDICTED: pentatricopeptide repeat-containi... 318 2e-84
ref|XP_006842061.1| hypothetical protein AMTR_s00078p00041370 [A... 315 1e-83
ref|XP_006404215.1| hypothetical protein EUTSA_v10010184mg [Eutr... 311 3e-82
ref|XP_006290741.1| hypothetical protein CARUB_v10016837mg [Caps... 303 8e-80
ref|NP_190450.1| pentatricopeptide repeat-containing protein [Ar... 300 7e-79
ref|XP_003589699.1| Pentatricopeptide repeat-containing protein ... 298 1e-78
ref|XP_002875927.1| pentatricopeptide repeat-containing protein ... 297 4e-78
ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containi... 295 2e-77
ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containi... 295 2e-77
ref|XP_007035867.1| Pentatricopeptide repeat (PPR) superfamily p... 292 1e-76
ref|XP_007224442.1| hypothetical protein PRUPE_ppa022250mg [Prun... 281 2e-73
>emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 348 bits (893), Expect = 2e-93
Identities = 182/268 (67%), Positives = 215/268 (80%)
Frame = +2
Query: 74 MHLKEGCSLLLKVRKPQKISFLLNTQTQAIPKIILNTEKIGNPPQNEYHVVRRLNHEKDM 253
MHLKEGCSLLLKVRKP I F+L+T +P + E+ + + E V++RL HE D+
Sbjct: 1 MHLKEGCSLLLKVRKPS-IPFVLSTNP--VPNLKAENEEKSSVLK-EADVLKRLKHEHDI 56
Query: 254 LVALAYFKSVANGGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCS 433
+AL YFKS+AN FKHT LTY+ MI+KL E+E +D VQYLLQQMKLEGISCS
Sbjct: 57 TLALEYFKSIANSKS-----FKHTPLTYQMMIEKLASERE-MDCVQYLLQQMKLEGISCS 110
Query: 434 EDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYN 613
ED+FISVI SY+RAG +EQALKTFYR++DF KPTVKIYNH+LDALL+EN+FQMI PIY+
Sbjct: 111 EDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYS 170
Query: 614 NMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLG 793
NMKKDG+E NVFTYNILLKALCKNNRVDGAH LLVEMS KGC PD+VSYTT++SSLCKLG
Sbjct: 171 NMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLG 230
Query: 794 RLKEARELIARVNPIVPAYNALINGLCR 877
++KEAREL P VP YNALING+C+
Sbjct: 231 KVKEARELAMSFTPSVPVYNALINGVCK 258
Score = 95.9 bits (237), Expect = 2e-17
Identities = 60/218 (27%), Positives = 111/218 (50%), Gaps = 11/218 (5%)
Frame = +2
Query: 269 YFKSVANGGDAEVPHFKHTH------LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISC 430
Y K+ G +EV ++ TH + Y M+D L + F + L++ M++E
Sbjct: 396 YAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMF-NQAYCLIENMQVENCPP 454
Query: 431 SEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIY 610
+ F + I +G + A+K F ++ + C P YN +LD+LL + +F +
Sbjct: 455 NTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLV 514
Query: 611 NNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKL 790
+M+ G+ELN+ TYN ++ C + A LL +M +G PD ++ ++ + CK
Sbjct: 515 KDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQ 574
Query: 791 GRLKEARELIARV-----NPIVPAYNALINGLCRHLDI 889
G++ A +L+ R+ +P + AY +LI+G+C H+ +
Sbjct: 575 GKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGV 612
Score = 77.4 bits (189), Expect = 7e-12
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 5/187 (2%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+ Y ++ L ++ D V + QM++ G + + ++ID Y +AG + A + +
Sbjct: 352 VAYNALMHGLCSKRSLGDAVS-VFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWN 410
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
+ C P V Y ++D L + F + NM+ + N T+N +K LC +
Sbjct: 411 WMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSG 470
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELI-----ARVNPIVPAYN 853
RVD A + +M GC P+ +Y ++ SL K R EA L+ + + YN
Sbjct: 471 RVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYN 530
Query: 854 ALINGLC 874
+I G C
Sbjct: 531 TIIYGYC 537
Score = 76.3 bits (186), Expect = 2e-11
Identities = 51/186 (27%), Positives = 91/186 (48%), Gaps = 5/186 (2%)
Frame = +2
Query: 332 TYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYR 511
TY ++ L + +DG LL +M +G E + ++I S + G ++A R
Sbjct: 183 TYNILLKALCKNNR-VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA-----R 236
Query: 512 IRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNR 691
P+V +YN +++ + E F+ + + M G++ NV +Y ++ AL
Sbjct: 237 ELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGN 296
Query: 692 VDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIAR-----VNPIVPAYNA 856
V+ + +L +M +GCSP+ ++T+++ G EA + R V P V AYNA
Sbjct: 297 VELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNA 356
Query: 857 LINGLC 874
L++GLC
Sbjct: 357 LMHGLC 362
Score = 69.7 bits (169), Expect = 1e-09
Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 5/187 (2%)
Frame = +2
Query: 335 YKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRI 514
Y +I+ + +E F + Q LL +M +GI + + ++I++ AG E +L ++
Sbjct: 249 YNALINGVCKEYTFEEAFQ-LLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKM 307
Query: 515 RDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRV 694
C P + + ++ + + ++ M ++GV NV YN L+ LC +
Sbjct: 308 FARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSL 367
Query: 695 DGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARE-----LIARVNPIVPAYNAL 859
A + +M GC P+ +Y+ ++ K G L A E + +P V AY +
Sbjct: 368 GDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCM 427
Query: 860 INGLCRH 880
++ LCR+
Sbjct: 428 VDVLCRN 434
Score = 67.8 bits (164), Expect = 5e-09
Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 5/187 (2%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
++Y T+I+ L ++ +L +M G S + F S+I + G + +AL +
Sbjct: 282 ISYTTIINALSDAGN-VELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWD 340
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
R+ P V YN ++ L ++ + ++N M+ +G NV TY+ L+ K
Sbjct: 341 RMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAG 400
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVN-----PIVPAYN 853
+DGA + M GC P+ V+YT +V LC+ +A LI + P +N
Sbjct: 401 DLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFN 460
Query: 854 ALINGLC 874
I GLC
Sbjct: 461 TFIKGLC 467
>ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 348 bits (893), Expect = 2e-93
Identities = 182/268 (67%), Positives = 215/268 (80%)
Frame = +2
Query: 74 MHLKEGCSLLLKVRKPQKISFLLNTQTQAIPKIILNTEKIGNPPQNEYHVVRRLNHEKDM 253
MHLKEGCSLLLKVRKP I F+L+T +P + E+ + + E V++RL HE D+
Sbjct: 1 MHLKEGCSLLLKVRKPS-IPFVLSTNP--VPNLKAENEEKSSVLK-EADVLKRLKHEHDI 56
Query: 254 LVALAYFKSVANGGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCS 433
+AL YFKS+AN FKHT LTY+ MI+KL E+E +D VQYLLQQMKLEGISCS
Sbjct: 57 TLALEYFKSIANSKS-----FKHTPLTYQMMIEKLASERE-MDCVQYLLQQMKLEGISCS 110
Query: 434 EDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYN 613
ED+FISVI SY+RAG +EQALKTFYR++DF KPTVKIYNH+LDALL+EN+FQMI PIY+
Sbjct: 111 EDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYS 170
Query: 614 NMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLG 793
NMKKDG+E NVFTYNILLKALCKNNRVDGAH LLVEMS KGC PD+VSYTT++SSLCKLG
Sbjct: 171 NMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLG 230
Query: 794 RLKEARELIARVNPIVPAYNALINGLCR 877
++KEAREL P VP YNALING+C+
Sbjct: 231 KVKEARELAMSFTPSVPVYNALINGVCK 258
Score = 95.9 bits (237), Expect = 2e-17
Identities = 60/218 (27%), Positives = 111/218 (50%), Gaps = 11/218 (5%)
Frame = +2
Query: 269 YFKSVANGGDAEVPHFKHTH------LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISC 430
Y K+ G +EV ++ TH + Y M+D L + F + L++ M++E
Sbjct: 396 YAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMF-NQAYCLIENMQVENCPP 454
Query: 431 SEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIY 610
+ F + I +G + A+K F ++ + C P YN +LD+LL + +F +
Sbjct: 455 NTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLV 514
Query: 611 NNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKL 790
+M+ G+ELN+ TYN ++ C + A LL +M +G PD ++ ++ + CK
Sbjct: 515 KDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQ 574
Query: 791 GRLKEARELIARV-----NPIVPAYNALINGLCRHLDI 889
G++ A +L+ R+ +P + AY +LI+G+C H+ +
Sbjct: 575 GKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGV 612
Score = 77.4 bits (189), Expect = 7e-12
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 5/187 (2%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+ Y ++ L ++ D V + QM++ G + + ++ID Y +AG + A + +
Sbjct: 352 VAYNALMHGLCSKRSLGDAVS-VFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWN 410
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
+ C P V Y ++D L + F + NM+ + N T+N +K LC +
Sbjct: 411 WMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSG 470
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELI-----ARVNPIVPAYN 853
RVD A + +M GC P+ +Y ++ SL K R EA L+ + + YN
Sbjct: 471 RVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYN 530
Query: 854 ALINGLC 874
+I G C
Sbjct: 531 TIIYGYC 537
Score = 76.3 bits (186), Expect = 2e-11
Identities = 51/186 (27%), Positives = 91/186 (48%), Gaps = 5/186 (2%)
Frame = +2
Query: 332 TYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYR 511
TY ++ L + +DG LL +M +G E + ++I S + G ++A R
Sbjct: 183 TYNILLKALCKNNR-VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA-----R 236
Query: 512 IRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNR 691
P+V +YN +++ + E F+ + + M G++ NV +Y ++ AL
Sbjct: 237 ELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGN 296
Query: 692 VDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIAR-----VNPIVPAYNA 856
V+ + +L +M +GCSP+ ++T+++ G EA + R V P V AYNA
Sbjct: 297 VELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNA 356
Query: 857 LINGLC 874
L++GLC
Sbjct: 357 LMHGLC 362
Score = 69.7 bits (169), Expect = 1e-09
Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 5/187 (2%)
Frame = +2
Query: 335 YKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRI 514
Y +I+ + +E F + Q LL +M +GI + + ++I++ AG E +L ++
Sbjct: 249 YNALINGVCKEYTFEEAFQ-LLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKM 307
Query: 515 RDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRV 694
C P + + ++ + + ++ M ++GV NV YN L+ LC +
Sbjct: 308 FARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSL 367
Query: 695 DGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARE-----LIARVNPIVPAYNAL 859
A + +M GC P+ +Y+ ++ K G L A E + +P V AY +
Sbjct: 368 GDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCM 427
Query: 860 INGLCRH 880
++ LCR+
Sbjct: 428 VDVLCRN 434
Score = 67.8 bits (164), Expect = 5e-09
Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 5/187 (2%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
++Y T+I+ L ++ +L +M G S + F S+I + G + +AL +
Sbjct: 282 ISYTTIINALSDAGN-VELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWD 340
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
R+ P V YN ++ L ++ + ++N M+ +G NV TY+ L+ K
Sbjct: 341 RMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAG 400
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVN-----PIVPAYN 853
+DGA + M GC P+ V+YT +V LC+ +A LI + P +N
Sbjct: 401 DLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFN 460
Query: 854 ALINGLC 874
I GLC
Sbjct: 461 TFIKGLC 467
>ref|XP_006338000.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Solanum tuberosum]
Length = 663
Score = 333 bits (855), Expect = 4e-89
Identities = 179/269 (66%), Positives = 211/269 (78%), Gaps = 1/269 (0%)
Frame = +2
Query: 74 MHLKEGCSLLLKVRKPQKISFLLNTQTQAIPKIILNTEKIGNPPQ-NEYHVVRRLNHEKD 250
M+LKEGCSLLLKV K + + +LN + LN K NP + E V++RL +E++
Sbjct: 1 MYLKEGCSLLLKVHK-KSLPLILNNVNPSFNVDQLNGGK--NPVELKESDVLKRLKYEEN 57
Query: 251 MLVALAYFKSVANGGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISC 430
+ A+ YFK VAN FKHT LTYK M++KLGQ++E +D VQYLLQQMKLE ISC
Sbjct: 58 ISNAIEYFKWVANS-----TFFKHTPLTYKIMMEKLGQQQE-MDTVQYLLQQMKLECISC 111
Query: 431 SEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIY 610
SEDIFISVIDSY+R +AEQALKTFYRI+DF CKPTV+IYNH+LDALL+EN+F MI PIY
Sbjct: 112 SEDIFISVIDSYRRGNMAEQALKTFYRIQDFGCKPTVRIYNHLLDALLSENRFHMINPIY 171
Query: 611 NNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKL 790
+NMKKDGV NV+TYNILLKALCKNNRVDGA LLVEMS KGCSPD+VSYTTIVSSLCK
Sbjct: 172 SNMKKDGVVPNVYTYNILLKALCKNNRVDGAMKLLVEMSNKGCSPDEVSYTTIVSSLCKF 231
Query: 791 GRLKEARELIARVNPIVPAYNALINGLCR 877
G++KEARE+ R P VP YNALINGLC+
Sbjct: 232 GKVKEAREVAMRFTPTVPVYNALINGLCK 260
Score = 78.2 bits (191), Expect = 4e-12
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 5/187 (2%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+ Y M+D L + F + LL M +E + F + I + E A+ +
Sbjct: 424 VVYTCMVDVLCRNFMF-EQAYSLLDDMVIENCPPNTITFNTFIKGLCCSVRIEWAVMLYN 482
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
++ F C YN +LD L N + + + M+K +E N+ TYN + LC
Sbjct: 483 QMERFGCSGNTTTYNELLDGLFKCNNLTVALQLVREMEKKNIEFNLVTYNTIASGLCHME 542
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELI-----ARVNPIVPAYN 853
++ A L+ +M +G PD +++ ++++ CK G+++ A++L+ + P +Y
Sbjct: 543 MLEEAVKLVAKMLVRGIRPDVLTFNILMNAYCKGGKVESAKQLLNAMSQVGLRPGFISYT 602
Query: 854 ALINGLC 874
LI+GLC
Sbjct: 603 CLIDGLC 609
Score = 77.0 bits (188), Expect = 9e-12
Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 5/186 (2%)
Frame = +2
Query: 332 TYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYR 511
TY ++ L + +DG LL +M +G S E + +++ S + G ++A + R
Sbjct: 185 TYNILLKALCKNNR-VDGAMKLLVEMSNKGCSPDEVSYTTIVSSLCKFGKVKEAREVAMR 243
Query: 512 IRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNR 691
PTV +YN +++ L + + + + M GV+ NV TY +L A
Sbjct: 244 FT-----PTVPVYNALINGLCKVYNTKEAVDLLDEMACKGVDPNVITYTTILNAFADQGN 298
Query: 692 VDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARE-----LIARVNPIVPAYNA 856
+ + +L +M GCSP+ S+T ++ LG+ EA + + P V AYNA
Sbjct: 299 IGLSFAMLSKMFVSGCSPNIHSFTCLIKGNSLLGQWYEALHVWDGMIKEGILPNVVAYNA 358
Query: 857 LINGLC 874
L++GLC
Sbjct: 359 LLHGLC 364
Score = 69.7 bits (169), Expect = 1e-09
Identities = 40/166 (24%), Positives = 82/166 (49%), Gaps = 5/166 (3%)
Frame = +2
Query: 407 MKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENK 586
M+ G + + ++ID + ++G +A + + R+ + C+P V +Y ++D L
Sbjct: 379 METSGCLPNSTTYSTLIDGFAKSGDVIKASEIWNRMINHGCRPNVVVYTCMVDVLCRNFM 438
Query: 587 FQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTT 766
F+ + ++M + N T+N +K LC + R++ A L +M + GCS + +Y
Sbjct: 439 FEQAYSLLDDMVIENCPPNTITFNTFIKGLCCSVRIEWAVMLYNQMERFGCSGNTTTYNE 498
Query: 767 IVSSLCKLGRLKEARELIARVNP-----IVPAYNALINGLCRHLDI 889
++ L K L A +L+ + + YN + +GLC H+++
Sbjct: 499 LLDGLFKCNNLTVALQLVREMEKKNIEFNLVTYNTIASGLC-HMEM 543
Score = 60.5 bits (145), Expect = 9e-07
Identities = 49/188 (26%), Positives = 79/188 (42%), Gaps = 6/188 (3%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQY-LLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTF 505
+TY T+++ + G+ + +L +M + G S + F +I G +AL +
Sbjct: 284 ITYTTILNAFADQGNI--GLSFAMLSKMFVSGCSPNIHSFTCLIKGNSLLGQWYEALHVW 341
Query: 506 YRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKN 685
+ P V YN +L L M + +Y+ M+ G N TY+ L+ K+
Sbjct: 342 DGMIKEGILPNVVAYNALLHGLCLAGNMNMALSVYSAMETSGCLPNSTTYSTLIDGFAKS 401
Query: 686 NRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEAREL-----IARVNPIVPAY 850
V A + M GC P+ V YT +V LC+ ++A L I P +
Sbjct: 402 GDVIKASEIWNRMINHGCRPNVVVYTCMVDVLCRNFMFEQAYSLLDDMVIENCPPNTITF 461
Query: 851 NALINGLC 874
N I GLC
Sbjct: 462 NTFIKGLC 469
Score = 60.5 bits (145), Expect = 9e-07
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 7/185 (3%)
Frame = +2
Query: 356 LGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKP 535
LGQ E L ++ M EGI + + +++ AG AL + + C P
Sbjct: 331 LGQWYEAL----HVWDGMIKEGILPNVVAYNALLHGLCLAGNMNMALSVYSAMETSGCLP 386
Query: 536 TVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLL 715
Y+ ++D I+N M G NV Y ++ LC+N + A+ LL
Sbjct: 387 NSTTYSTLIDGFAKSGDVIKASEIWNRMINHGCRPNVVVYTCMVDVLCRNFMFEQAYSLL 446
Query: 716 VEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVNPI-----VPAYNALINGL--C 874
+M + C P+ +++ T + LC R++ A L ++ YN L++GL C
Sbjct: 447 DDMVIENCPPNTITFNTFIKGLCCSVRIEWAVMLYNQMERFGCSGNTTTYNELLDGLFKC 506
Query: 875 RHLDI 889
+L +
Sbjct: 507 NNLTV 511
>ref|XP_004229098.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Solanum lycopersicum]
Length = 663
Score = 326 bits (836), Expect = 6e-87
Identities = 174/269 (64%), Positives = 210/269 (78%), Gaps = 1/269 (0%)
Frame = +2
Query: 74 MHLKEGCSLLLKVRKPQKISFLLNTQTQAIPKIILNTEKIGNPPQ-NEYHVVRRLNHEKD 250
M+LK+GCSLLLKV+K + + +LN + N K P + E+ V++RL ++++
Sbjct: 1 MYLKDGCSLLLKVQK-RSLPLILNNVNASFNVDQFNGGK--TPVELKEFDVLKRLKYDEN 57
Query: 251 MLVALAYFKSVANGGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISC 430
+ AL YFK VAN FKHT LTYK M++KLGQ +E +D VQYLLQQMKLEGISC
Sbjct: 58 ISNALEYFKWVANS-----TFFKHTPLTYKIMMEKLGQHQE-MDSVQYLLQQMKLEGISC 111
Query: 431 SEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIY 610
SEDIFISVIDSY+R AEQALKTFYRI+DF CKPTV+IYNH+LDALL+E++F MI PIY
Sbjct: 112 SEDIFISVIDSYRRGNTAEQALKTFYRIQDFGCKPTVRIYNHLLDALLSEDRFHMINPIY 171
Query: 611 NNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKL 790
NNMKKDGV NV+T+NILLKALCKNNRVDGA LL+EMS K CSPD+VSYTTIVSSLCK
Sbjct: 172 NNMKKDGVVPNVYTHNILLKALCKNNRVDGALKLLMEMSNKVCSPDEVSYTTIVSSLCKF 231
Query: 791 GRLKEARELIARVNPIVPAYNALINGLCR 877
G+++EARE+ R P VPAYNALINGLC+
Sbjct: 232 GKVREAREVAMRFTPTVPAYNALINGLCK 260
Score = 80.9 bits (198), Expect = 6e-13
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 5/187 (2%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+ Y M+D L + F + LL M +E + F + I +G E A+ +
Sbjct: 424 VVYTCMVDVLCRNFMF-EQAYSLLDHMVIENCPPNTITFNTFIKGLCCSGRIEWAVMLYN 482
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
++ F C YN +LD L N + + + M++ +E N+ TYN + LC
Sbjct: 483 QMERFGCSGNTTSYNELLDGLFKCNNLTVALQLVREMEEKNIEFNLVTYNTIASGLCHMG 542
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELI-----ARVNPIVPAYN 853
++ A L+ +M KG PD +++ ++++ CK G+++ A++L+ + P +Y
Sbjct: 543 MLEEAVKLVAKMLVKGIRPDVLTFNILMNAYCKGGKVESAKQLLNAMSQVGLRPGFISYT 602
Query: 854 ALINGLC 874
LI+GLC
Sbjct: 603 CLIDGLC 609
Score = 77.4 bits (189), Expect = 7e-12
Identities = 69/254 (27%), Positives = 109/254 (42%), Gaps = 10/254 (3%)
Frame = +2
Query: 143 NTQTQAIPKIILNTEKIGNPPQNEYHVVRRLNHEKDMLVALAYFKSVAN-----GGDAEV 307
NT QA+ K + G P VR NH D L++ F + D V
Sbjct: 127 NTAEQAL-KTFYRIQDFGCKP-----TVRIYNHLLDALLSEDRFHMINPIYNNMKKDGVV 180
Query: 308 PHFKHTHLTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAE 487
P+ ++ K + + +DG LL +M + S E + +++ S + G
Sbjct: 181 PNVYTHNILLKALC-----KNNRVDGALKLLMEMSNKVCSPDEVSYTTIVSSLCKFGKVR 235
Query: 488 QALKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILL 667
+A + R PTV YN +++ L E + + + N M GV+ NV TY LL
Sbjct: 236 EAREVAMRFT-----PTVPAYNALINGLCKEYNTKEAVDLLNEMAYKGVDPNVITYTTLL 290
Query: 668 KALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARE-----LIARVN 832
A + + +L +M GCSP+ S+T ++ LG+ EA + +
Sbjct: 291 NAFADQGNIGLSFAMLSKMFVSGCSPNIHSFTCLIKGNSLLGQWYEALHVWDGMIKEGIL 350
Query: 833 PIVPAYNALINGLC 874
P V AYNAL++GLC
Sbjct: 351 PNVVAYNALLHGLC 364
Score = 68.9 bits (167), Expect = 2e-09
Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Frame = +2
Query: 443 FISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMK 622
+ ++ID + ++G +A + + R+ + C P V +Y ++D L F+ + ++M
Sbjct: 391 YSTLIDGFAKSGDVIKASEIWNRMINHGCHPNVVVYTCMVDVLCRNFMFEQAYSLLDHMV 450
Query: 623 KDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLK 802
+ N T+N +K LC + R++ A L +M + GCS + SY ++ L K L
Sbjct: 451 IENCPPNTITFNTFIKGLCCSGRIEWAVMLYNQMERFGCSGNTTSYNELLDGLFKCNNLT 510
Query: 803 EARELIARVNP-----IVPAYNALINGLC 874
A +L+ + + YN + +GLC
Sbjct: 511 VALQLVREMEEKNIEFNLVTYNTIASGLC 539
Score = 66.2 bits (160), Expect = 2e-08
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 7/185 (3%)
Frame = +2
Query: 356 LGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKP 535
LGQ E L ++ M EGI + + +++ AG AL + + DC P
Sbjct: 331 LGQWYEAL----HVWDGMIKEGILPNVVAYNALLHGLCLAGNMNMALSVYSAMETSDCLP 386
Query: 536 TVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLL 715
Y+ ++D I+N M G NV Y ++ LC+N + A+ LL
Sbjct: 387 NSTTYSTLIDGFAKSGDVIKASEIWNRMINHGCHPNVVVYTCMVDVLCRNFMFEQAYSLL 446
Query: 716 VEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVNPI-----VPAYNALINGL--C 874
M + C P+ +++ T + LC GR++ A L ++ +YN L++GL C
Sbjct: 447 DHMVIENCPPNTITFNTFIKGLCCSGRIEWAVMLYNQMERFGCSGNTTSYNELLDGLFKC 506
Query: 875 RHLDI 889
+L +
Sbjct: 507 NNLTV 511
Score = 58.2 bits (139), Expect = 4e-06
Identities = 48/188 (25%), Positives = 78/188 (41%), Gaps = 6/188 (3%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQY-LLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTF 505
+TY T+++ + G+ + +L +M + G S + F +I G +AL +
Sbjct: 284 ITYTTLLNAFADQGNI--GLSFAMLSKMFVSGCSPNIHSFTCLIKGNSLLGQWYEALHVW 341
Query: 506 YRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKN 685
+ P V YN +L L M + +Y+ M+ N TY+ L+ K+
Sbjct: 342 DGMIKEGILPNVVAYNALLHGLCLAGNMNMALSVYSAMETSDCLPNSTTYSTLIDGFAKS 401
Query: 686 NRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEAREL-----IARVNPIVPAY 850
V A + M GC P+ V YT +V LC+ ++A L I P +
Sbjct: 402 GDVIKASEIWNRMINHGCHPNVVVYTCMVDVLCRNFMFEQAYSLLDHMVIENCPPNTITF 461
Query: 851 NALINGLC 874
N I GLC
Sbjct: 462 NTFIKGLC 469
>ref|XP_004295051.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Fragaria vesca subsp. vesca]
Length = 666
Score = 326 bits (835), Expect = 8e-87
Identities = 168/271 (61%), Positives = 207/271 (76%), Gaps = 3/271 (1%)
Frame = +2
Query: 74 MHLKEGCSLLLKVRKPQKISFLLNTQTQAIPKIILNTEKIGNPPQ---NEYHVVRRLNHE 244
M+LKEGCSLLLK+ KP + +L++ +P LN + P Q E V +RL HE
Sbjct: 1 MYLKEGCSLLLKIHKPTR-PLVLSSNPNLVPS--LNPKPQTEPTQPILKESEVFQRLKHE 57
Query: 245 KDMLVALAYFKSVANGGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGI 424
+ +AL YF+S++N FKHT LTY MI+KLG + E +DGVQYL+ QMKLEG+
Sbjct: 58 PQLGLALEYFRSISNSRA-----FKHTQLTYTAMIEKLGSQCE-MDGVQYLMHQMKLEGV 111
Query: 425 SCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIP 604
SCSED+FISV+ +Y+RAGLAEQALK FYRIR+F CKP+VKIYNH+LDALL EN+F+MI P
Sbjct: 112 SCSEDLFISVVKAYRRAGLAEQALKVFYRIREFGCKPSVKIYNHLLDALLCENRFRMINP 171
Query: 605 IYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLC 784
+Y NMKKDG+ NVFTYNILLKALCKN+RVDGAH LLVEMSKKGC PD VSYTT+VS+LC
Sbjct: 172 VYVNMKKDGMVPNVFTYNILLKALCKNDRVDGAHKLLVEMSKKGCCPDTVSYTTVVSALC 231
Query: 785 KLGRLKEARELIARVNPIVPAYNALINGLCR 877
+LG++ EAREL + P V YNAL+NGLC+
Sbjct: 232 RLGKVDEARELACKFEPNVAVYNALVNGLCK 262
Score = 86.7 bits (213), Expect = 1e-14
Identities = 52/193 (26%), Positives = 94/193 (48%), Gaps = 5/193 (2%)
Frame = +2
Query: 314 FKHTHLTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQA 493
F+ + Y T+I L + +L +M+ +G S + + ++ID + +AG +A
Sbjct: 351 FEPNVVAYTTVIHGLCSVGNMRKAIS-VLHEMQKKGCSPNVTTYSTLIDGFAKAGNLVRA 409
Query: 494 LKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKA 673
+T+ + D C+P V Y ++D L + F + NM +G N+ T+N +K
Sbjct: 410 SETWNNMMDCGCRPNVIAYTCMVDVLCRKYMFNQAQCLLENMTAEGCPPNIVTFNTFIKG 469
Query: 674 LCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVNP-----I 838
LC+ VD A +L +M G P+ +Y ++ L K+ + KEA L+ ++
Sbjct: 470 LCEGGEVDWAVKVLNKMRDNGSLPNITTYNELLYGLFKVNKFKEAFGLVREIHDKGLKLN 529
Query: 839 VPAYNALINGLCR 877
+ YN ++NG CR
Sbjct: 530 LVTYNTILNGFCR 542
Score = 84.3 bits (207), Expect = 6e-14
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 6/193 (3%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+ Y M+D L ++ F + Q LL+ M EG + F + I G + A+K
Sbjct: 426 IAYTCMVDVLCRKYMF-NQAQCLLENMTAEGCPPNIVTFNTFIKGLCEGGEVDWAVKVLN 484
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
++RD P + YN +L L NKF+ + + G++LN+ TYN +L C+
Sbjct: 485 KMRDNGSLPNITTYNELLYGLFKVNKFKEAFGLVREIHDKGLKLNLVTYNTILNGFCRAG 544
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVN------PIVPAY 850
+ + +M K G PD ++Y ++ CK GR++ A +L P V Y
Sbjct: 545 MTNETMQVFGDMLKCGTKPDTITYNILIYFFCKQGRIESAIQLFNSTGAAKEWCPDVITY 604
Query: 851 NALINGLCRHLDI 889
+L+ G+C + +
Sbjct: 605 TSLLWGICSSIGL 617
Score = 80.5 bits (197), Expect = 8e-13
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 5/193 (2%)
Frame = +2
Query: 314 FKHTHLTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQA 493
F+ Y +++ L +E +F + + LL +M +G+ + + +VI S E A
Sbjct: 246 FEPNVAVYNALVNGLCKEFKFEEAL-VLLVEMADKGLDPNVITYSTVISSLSDMRNVESA 304
Query: 494 LKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKA 673
L ++ C+P + + ++ E + + ++N M +G E NV Y ++
Sbjct: 305 LAVLAKMFVRGCRPNIHTFTSLIKGYFMEGRVSEALDLWNRMVCEGFEPNVVAYTTVIHG 364
Query: 674 LCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARE-----LIARVNPI 838
LC + A +L EM KKGCSP+ +Y+T++ K G L A E + P
Sbjct: 365 LCSVGNMRKAISVLHEMQKKGCSPNVTTYSTLIDGFAKAGNLVRASETWNNMMDCGCRPN 424
Query: 839 VPAYNALINGLCR 877
V AY +++ LCR
Sbjct: 425 VIAYTCMVDVLCR 437
Score = 71.6 bits (174), Expect = 4e-10
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 5/176 (2%)
Frame = +2
Query: 359 GQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPT 538
G+ E LD L +M EG + + +VI G +A+ + ++ C P
Sbjct: 334 GRVSEALD----LWNRMVCEGFEPNVVAYTTVIHGLCSVGNMRKAISVLHEMQKKGCSPN 389
Query: 539 VKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLV 718
V Y+ ++D +NNM G NV Y ++ LC+ + A LL
Sbjct: 390 VTTYSTLIDGFAKAGNLVRASETWNNMMDCGCRPNVIAYTCMVDVLCRKYMFNQAQCLLE 449
Query: 719 EMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVN-----PIVPAYNALINGL 871
M+ +GC P+ V++ T + LC+ G + A +++ ++ P + YN L+ GL
Sbjct: 450 NMTAEGCPPNIVTFNTFIKGLCEGGEVDWAVKVLNKMRDNGSLPNITTYNELLYGL 505
Score = 71.2 bits (173), Expect = 5e-10
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 5/187 (2%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+TY T+I L + ++ +L +M + G + F S+I Y G +AL +
Sbjct: 286 ITYSTVISSLSDMRN-VESALAVLAKMFVRGCRPNIHTFTSLIKGYFMEGRVSEALDLWN 344
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
R+ +P V Y V+ L + + I + + M+K G NV TY+ L+ K
Sbjct: 345 RMVCEGFEPNVVAYTTVIHGLCSVGNMRKAISVLHEMQKKGCSPNVTTYSTLIDGFAKAG 404
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVN-----PIVPAYN 853
+ A M GC P+ ++YT +V LC+ +A+ L+ + P + +N
Sbjct: 405 NLVRASETWNNMMDCGCRPNVIAYTCMVDVLCRKYMFNQAQCLLENMTAEGCPPNIVTFN 464
Query: 854 ALINGLC 874
I GLC
Sbjct: 465 TFIKGLC 471
>ref|XP_002314968.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550329900|gb|EEF01139.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 662
Score = 325 bits (832), Expect = 2e-86
Identities = 169/268 (63%), Positives = 207/268 (77%)
Frame = +2
Query: 74 MHLKEGCSLLLKVRKPQKISFLLNTQTQAIPKIILNTEKIGNPPQNEYHVVRRLNHEKDM 253
M+LKEGCSLLLK +KP + F+LNT L E+ E V+ +L +E ++
Sbjct: 1 MYLKEGCSLLLKKQKPL-VPFVLNTINP------LQNEQKDLNLLKESEVLNKLKNEPNI 53
Query: 254 LVALAYFKSVANGGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCS 433
L+AL +FKS+AN FKHT LTY TMI +LG E++ +DG+QYLLQ MKLEGISC+
Sbjct: 54 LLALHFFKSIANSNS-----FKHTPLTYTTMIKRLGYERD-IDGIQYLLQLMKLEGISCN 107
Query: 434 EDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYN 613
ED+F+ VI++Y+RAGLAEQALKTFYRI +F CKP+VKIYNHVLDALL+ENKFQMI IYN
Sbjct: 108 EDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYN 167
Query: 614 NMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLG 793
NMK+DG+ELNV+TYN+LLKALCKNNRVD A LL EMS KGC PD VSYTT+VSS+C+LG
Sbjct: 168 NMKRDGIELNVYTYNMLLKALCKNNRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLG 227
Query: 794 RLKEARELIARVNPIVPAYNALINGLCR 877
+++EAREL R+ VP YNALING CR
Sbjct: 228 KVEEARELSMRIKSFVPVYNALINGFCR 255
Score = 88.6 bits (218), Expect = 3e-15
Identities = 62/226 (27%), Positives = 114/226 (50%), Gaps = 7/226 (3%)
Frame = +2
Query: 224 VRRLNHEKDMLVALAYFKSVANG--GDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGVQYL 397
V+ NH D L++ F+ + NG + + + TY ++ L + +D + L
Sbjct: 143 VKIYNHVLDALLSENKFQMI-NGIYNNMKRDGIELNVYTYNMLLKALCKNNR-VDAARKL 200
Query: 398 LQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLN 577
L +M +G + +V+ S R G E+A + RI+ F V +YN +++
Sbjct: 201 LAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSF-----VPVYNALINGFCR 255
Query: 578 ENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVS 757
E+K + + ++N M +G++ +V TY+ ++ L + V+ A +L +M +GCSP+ +
Sbjct: 256 EHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHT 315
Query: 758 YTTIVSSLCKLGRLKEARELIARV-----NPIVPAYNALINGLCRH 880
+T+++ GRL EA +L R+ P AYN LI+GLC +
Sbjct: 316 FTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSY 361
Score = 85.9 bits (211), Expect = 2e-14
Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 6/193 (3%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+ Y M+D L + F + +L++ M + F + I +G E A+K
Sbjct: 419 VVYTCMVDVLCRNSMFNHAL-HLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLN 477
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
++R + C P V YN VLD L N + + + I +++ ++ N+ TYN +L C
Sbjct: 478 QMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAG 537
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVN------PIVPAY 850
GA + ++ G PD ++Y T++ + CK G +K A +L+ R+ P V Y
Sbjct: 538 MFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTY 597
Query: 851 NALINGLCRHLDI 889
+L+ G+C + +
Sbjct: 598 TSLLWGVCNWIGV 610
Score = 80.9 bits (198), Expect = 6e-13
Identities = 44/187 (23%), Positives = 92/187 (49%), Gaps = 5/187 (2%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+ Y T+I L + ++ V + Q+M+ G+ +E + ++ID + +AG A + +
Sbjct: 349 VAYNTLIHGLCSYGKMVEAVS-VSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWN 407
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
++ C P V +Y ++D L + F + + NM N T+N +K LC +
Sbjct: 408 KMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSG 467
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVNPI-----VPAYN 853
+ + A +L +M + GC+P+ +Y ++ L R +EA +++ + + + YN
Sbjct: 468 KTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYN 527
Query: 854 ALINGLC 874
+++G C
Sbjct: 528 TILSGFC 534
Score = 71.2 bits (173), Expect = 5e-10
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 5/187 (2%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+TY T+I+ L E ++ +L +M L G S + F S++ Y G +AL +
Sbjct: 279 ITYSTVINTLS-EMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWN 337
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
R+ +P YN ++ L + K + + M+++GV N TY+ L+ K
Sbjct: 338 RMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAG 397
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARV-----NPIVPAYN 853
+ GA + +M GC P+ V YT +V LC+ A LI + P +N
Sbjct: 398 DLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFN 457
Query: 854 ALINGLC 874
I GLC
Sbjct: 458 TFIKGLC 464
Score = 70.9 bits (172), Expect = 6e-10
Identities = 45/187 (24%), Positives = 87/187 (46%), Gaps = 5/187 (2%)
Frame = +2
Query: 335 YKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRI 514
Y +I+ +E + ++ V L +M +EGI + +VI++ G E AL ++
Sbjct: 246 YNALINGFCREHK-MEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKM 304
Query: 515 RDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRV 694
C P V + ++ + + ++N M ++G E N YN L+ LC ++
Sbjct: 305 FLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKM 364
Query: 695 DGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARV-----NPIVPAYNAL 859
A + +M + G P++ +Y+T++ K G L A E+ ++ P V Y +
Sbjct: 365 VEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCM 424
Query: 860 INGLCRH 880
++ LCR+
Sbjct: 425 VDVLCRN 431
>ref|XP_006488802.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Citrus sinensis]
Length = 661
Score = 324 bits (830), Expect = 3e-86
Identities = 172/268 (64%), Positives = 208/268 (77%)
Frame = +2
Query: 74 MHLKEGCSLLLKVRKPQKISFLLNTQTQAIPKIILNTEKIGNPPQNEYHVVRRLNHEKDM 253
M+LK+GCSL+LK +KP I F+LNT IP + K + +E+ V +RL E ++
Sbjct: 1 MYLKKGCSLILKTQKPS-IPFVLNTNP--IPNSTNDENKYTHV--DEFRVSKRLRQEPNI 55
Query: 254 LVALAYFKSVANGGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCS 433
AL YFKS+AN FKHT LTY+ MI+KLG++ E +DGVQYLLQQMK+EG+SCS
Sbjct: 56 ASALNYFKSIANSNT-----FKHTALTYQVMIEKLGEKCE-IDGVQYLLQQMKVEGVSCS 109
Query: 434 EDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYN 613
E +FISVI+SY+R GLAEQALK FYRIR+F KPTVKIYNH+LDALL EN+F MI PIY+
Sbjct: 110 EGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYS 169
Query: 614 NMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLG 793
NMK+DG+E NVFTYNILLKALCKNNRVDGA+ LLVEM KGC+PD VSYTTIVSS+CKLG
Sbjct: 170 NMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSMCKLG 229
Query: 794 RLKEARELIARVNPIVPAYNALINGLCR 877
+++EAREL R V YNALINGLC+
Sbjct: 230 QVEEARELAMRFGSGVSVYNALINGLCK 257
Score = 90.1 bits (222), Expect = 1e-15
Identities = 51/188 (27%), Positives = 95/188 (50%), Gaps = 6/188 (3%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+ Y M+ L Q F L+++M E + F + I G + A+K
Sbjct: 421 VAYTCMVKVLCQNNMFHQA-HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 479
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
+++ ++C P + YN +LD LL N+ + + ++K G++LN+ TYN +L +C+
Sbjct: 480 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 539
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARV------NPIVPAY 850
V A LL +M +G D +++ I+ + CK G++ A +L+ R+ NP + +Y
Sbjct: 540 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 599
Query: 851 NALINGLC 874
+L+ G+C
Sbjct: 600 TSLLWGIC 607
Score = 84.0 bits (206), Expect = 7e-14
Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 5/166 (3%)
Frame = +2
Query: 395 LLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALL 574
L +M EG + + ++I G ++A+ Y++ + C P V Y+ ++D
Sbjct: 337 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 396
Query: 575 NENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDV 754
I+N M +G NV Y ++K LC+NN AH L+ +M+ + C P+ V
Sbjct: 397 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 456
Query: 755 SYTTIVSSLCKLGRLKEARELIARVN-----PIVPAYNALINGLCR 877
++ T + LC GR+ A +L+ ++ P + YN L++GL R
Sbjct: 457 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 502
Score = 79.0 bits (193), Expect = 2e-12
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 7/190 (3%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDI--FISVIDSYKRAGLAEQALKT 502
+ Y T+I L + V Q +E SC ++ + ++ID + +AG A +
Sbjct: 351 VAYSTLIHGLCSNGSMDEAVSVSYQ---MEENSCPPNVTTYSALIDGFAKAGNLLGASQI 407
Query: 503 FYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCK 682
+ R+ C P V Y ++ L N F + M + N T+N +K LC
Sbjct: 408 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 467
Query: 683 NNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVNPI-----VPA 847
RVD A LL +M + C P+ +Y ++ L ++ R+KEA EL+ + +
Sbjct: 468 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 527
Query: 848 YNALINGLCR 877
YN +++G+CR
Sbjct: 528 YNTILHGVCR 537
Score = 77.8 bits (190), Expect = 5e-12
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 5/186 (2%)
Frame = +2
Query: 332 TYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYR 511
TY ++ L + +DG LL +M +G + + +++ S + G E+A + R
Sbjct: 182 TYNILLKALCKNNR-VDGAYKLLVEMGNKGCAPDAVSYTTIVSSMCKLGQVEEARELAMR 240
Query: 512 IRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNR 691
V +YN +++ L E+K + + M G++ NV TY+ ++ +LC
Sbjct: 241 FGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 295
Query: 692 VDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARV-----NPIVPAYNA 856
V+ + G+L +M +GC+P+ S+T+++ GR EA +L R+ P V AY+
Sbjct: 296 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 355
Query: 857 LINGLC 874
LI+GLC
Sbjct: 356 LIHGLC 361
Score = 68.2 bits (165), Expect = 4e-09
Identities = 45/187 (24%), Positives = 87/187 (46%), Gaps = 5/187 (2%)
Frame = +2
Query: 335 YKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRI 514
Y +I+ L +E + ++ +LL +M GI + + ++I S G E +L ++
Sbjct: 248 YNALINGLCKEHK-IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 306
Query: 515 RDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRV 694
C P + + +L L + ++N M ++G NV Y+ L+ LC N +
Sbjct: 307 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 366
Query: 695 DGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARV-----NPIVPAYNAL 859
D A + +M + C P+ +Y+ ++ K G L A ++ R+ +P V AY +
Sbjct: 367 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 426
Query: 860 INGLCRH 880
+ LC++
Sbjct: 427 VKVLCQN 433
Score = 67.4 bits (163), Expect = 7e-09
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 8/190 (4%)
Frame = +2
Query: 329 LTYKTMIDKL---GQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALK 499
+TY T+I L G + L +L QM + G + + F S++ Y G +A
Sbjct: 281 ITYSTIISSLCDVGNVETSLG----ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 336
Query: 500 TFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALC 679
+ R+ P V Y+ ++ L + + + M+++ NV TY+ L+
Sbjct: 337 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 396
Query: 680 KNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARV-----NPIVP 844
K + GA + M GCSP+ V+YT +V LC+ +A LI ++ P
Sbjct: 397 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 456
Query: 845 AYNALINGLC 874
+N I GLC
Sbjct: 457 TFNTFIKGLC 466
Score = 60.1 bits (144), Expect = 1e-06
Identities = 41/166 (24%), Positives = 75/166 (45%)
Frame = +2
Query: 332 TYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYR 511
TY +ID + L G + +M G S + + ++ + + QA +
Sbjct: 387 TYSALIDGFAKAGNLL-GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 445
Query: 512 IRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNR 691
+ +C P +N + L + + + + MK+ N+ TYN LL L + NR
Sbjct: 446 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 505
Query: 692 VDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARV 829
V A L+ E+ K G + V+Y TI+ +C+ G + EA +L+ ++
Sbjct: 506 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 551
>ref|XP_006419330.1| hypothetical protein CICLE_v10004501mg [Citrus clementina]
gi|557521203|gb|ESR32570.1| hypothetical protein
CICLE_v10004501mg [Citrus clementina]
Length = 661
Score = 323 bits (829), Expect = 4e-86
Identities = 171/268 (63%), Positives = 208/268 (77%)
Frame = +2
Query: 74 MHLKEGCSLLLKVRKPQKISFLLNTQTQAIPKIILNTEKIGNPPQNEYHVVRRLNHEKDM 253
M+LK+GCSL+LK +KP I F+LNT IP + K + +E+ V +RL E ++
Sbjct: 1 MYLKKGCSLILKTQKPS-IPFVLNTNP--IPNSTNDENKYTHV--DEFRVSKRLRQEPNI 55
Query: 254 LVALAYFKSVANGGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCS 433
AL YFKS+AN FKHT LTY+ MI+KLG++ E +DGVQYLLQQMK+EG+SCS
Sbjct: 56 ASALNYFKSIANSNT-----FKHTALTYQVMIEKLGEKCE-IDGVQYLLQQMKVEGVSCS 109
Query: 434 EDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYN 613
E +F+SVI+SY+R GLAEQALK FYRIR+F KPTVKIYNH+LDALL EN+F MI PIY+
Sbjct: 110 EGVFVSVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYS 169
Query: 614 NMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLG 793
NMK+DG+E NVFTYNILLKALCKNNRVDGA+ LLVEM KGC+PD VSYTTIVSS+CKLG
Sbjct: 170 NMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSMCKLG 229
Query: 794 RLKEARELIARVNPIVPAYNALINGLCR 877
+++EAREL R V YNALINGLC+
Sbjct: 230 QVEEARELAMRFGSGVSVYNALINGLCK 257
Score = 90.1 bits (222), Expect = 1e-15
Identities = 51/188 (27%), Positives = 95/188 (50%), Gaps = 6/188 (3%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+ Y M+ L Q F L+++M E + F + I G + A+K
Sbjct: 421 VAYTCMVKVLCQNNMFHQA-HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 479
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
+++ ++C P + YN +LD LL N+ + + ++K G++LN+ TYN +L +C+
Sbjct: 480 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 539
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARV------NPIVPAY 850
V A LL +M +G D +++ I+ + CK G++ A +L+ R+ NP + +Y
Sbjct: 540 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 599
Query: 851 NALINGLC 874
+L+ G+C
Sbjct: 600 TSLLWGIC 607
Score = 84.0 bits (206), Expect = 7e-14
Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 5/166 (3%)
Frame = +2
Query: 395 LLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALL 574
L +M EG + + ++I G ++A+ Y++ + C P V Y+ ++D
Sbjct: 337 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 396
Query: 575 NENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDV 754
I+N M +G NV Y ++K LC+NN AH L+ +M+ + C P+ V
Sbjct: 397 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 456
Query: 755 SYTTIVSSLCKLGRLKEARELIARVN-----PIVPAYNALINGLCR 877
++ T + LC GR+ A +L+ ++ P + YN L++GL R
Sbjct: 457 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 502
Score = 79.0 bits (193), Expect = 2e-12
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 7/190 (3%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDI--FISVIDSYKRAGLAEQALKT 502
+ Y T+I L + V Q +E SC ++ + ++ID + +AG A +
Sbjct: 351 VAYSTLIHGLCSNGSMDEAVSVSYQ---MEENSCPPNVTTYSALIDGFAKAGNLLGASQI 407
Query: 503 FYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCK 682
+ R+ C P V Y ++ L N F + M + N T+N +K LC
Sbjct: 408 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 467
Query: 683 NNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVNPI-----VPA 847
RVD A LL +M + C P+ +Y ++ L ++ R+KEA EL+ + +
Sbjct: 468 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 527
Query: 848 YNALINGLCR 877
YN +++G+CR
Sbjct: 528 YNTILHGVCR 537
Score = 76.6 bits (187), Expect = 1e-11
Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 5/186 (2%)
Frame = +2
Query: 332 TYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYR 511
TY ++ L + +DG LL +M +G + + +++ S + G E+A + R
Sbjct: 182 TYNILLKALCKNNR-VDGAYKLLVEMGNKGCAPDAVSYTTIVSSMCKLGQVEEARELAMR 240
Query: 512 IRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNR 691
V +YN +++ L E++ + + M G++ NV TY+ ++ +LC
Sbjct: 241 FGS-----GVSVYNALINGLCKEHRIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 295
Query: 692 VDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARV-----NPIVPAYNA 856
V+ + G+L +M +GC+P+ S+T+++ GR EA +L R+ P V AY+
Sbjct: 296 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 355
Query: 857 LINGLC 874
LI+GLC
Sbjct: 356 LIHGLC 361
Score = 67.8 bits (164), Expect = 5e-09
Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 5/187 (2%)
Frame = +2
Query: 335 YKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRI 514
Y +I+ L +E ++ +LL +M GI + + ++I S G E +L ++
Sbjct: 248 YNALINGLCKEHR-IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 306
Query: 515 RDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRV 694
C P + + +L L + ++N M ++G NV Y+ L+ LC N +
Sbjct: 307 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 366
Query: 695 DGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARV-----NPIVPAYNAL 859
D A + +M + C P+ +Y+ ++ K G L A ++ R+ +P V AY +
Sbjct: 367 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 426
Query: 860 INGLCRH 880
+ LC++
Sbjct: 427 VKVLCQN 433
Score = 67.4 bits (163), Expect = 7e-09
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 8/190 (4%)
Frame = +2
Query: 329 LTYKTMIDKL---GQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALK 499
+TY T+I L G + L +L QM + G + + F S++ Y G +A
Sbjct: 281 ITYSTIISSLCDVGNVETSLG----ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 336
Query: 500 TFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALC 679
+ R+ P V Y+ ++ L + + + M+++ NV TY+ L+
Sbjct: 337 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 396
Query: 680 KNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARV-----NPIVP 844
K + GA + M GCSP+ V+YT +V LC+ +A LI ++ P
Sbjct: 397 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 456
Query: 845 AYNALINGLC 874
+N I GLC
Sbjct: 457 TFNTFIKGLC 466
Score = 60.1 bits (144), Expect = 1e-06
Identities = 41/166 (24%), Positives = 75/166 (45%)
Frame = +2
Query: 332 TYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYR 511
TY +ID + L G + +M G S + + ++ + + QA +
Sbjct: 387 TYSALIDGFAKAGNLL-GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 445
Query: 512 IRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNR 691
+ +C P +N + L + + + + MK+ N+ TYN LL L + NR
Sbjct: 446 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 505
Query: 692 VDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARV 829
V A L+ E+ K G + V+Y TI+ +C+ G + EA +L+ ++
Sbjct: 506 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 551
>ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223541582|gb|EEF43131.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 665
Score = 323 bits (829), Expect = 4e-86
Identities = 172/272 (63%), Positives = 207/272 (76%)
Frame = +2
Query: 74 MHLKEGCSLLLKVRKPQKISFLLNTQTQAIPKIILNTEKIGNPPQNEYHVVRRLNHEKDM 253
M+LKEGCSLLLKV KP I F+LNT P + P E VV RL E D+
Sbjct: 1 MYLKEGCSLLLKVHKPL-IPFVLNTNPILNPGNKPPEYQEIKTPIKESDVVMRLRTETDI 59
Query: 254 LVALAYFKSVANGGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCS 433
++A YF+S+AN F+HT LTY+ MI+KLG+E + +DGVQYLLQQMKLEGISCS
Sbjct: 60 VLASNYFRSIANS-----KAFQHTQLTYQIMIEKLGRECD-VDGVQYLLQQMKLEGISCS 113
Query: 434 EDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYN 613
ED+FI+VI++Y+R GLAEQALK FYRIR+F C+PTVKIYNH+LDA+L+EN+FQMI PIY+
Sbjct: 114 EDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYS 173
Query: 614 NMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLG 793
NMK+DG E NV+TYNILLKALCKNNRVDGA LLVEMS KGC PD VSYTT++SS+ KLG
Sbjct: 174 NMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLG 233
Query: 794 RLKEARELIARVNPIVPAYNALINGLCRHLDI 889
+++EAREL R P V YNALING CR +
Sbjct: 234 KVEEARELSIRFQPNVSVYNALINGFCREYKV 265
Score = 98.2 bits (243), Expect = 4e-18
Identities = 54/193 (27%), Positives = 99/193 (51%), Gaps = 6/193 (3%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+ Y +M++ L + F L+++M + + F + I +G E A+ F
Sbjct: 425 VVYTSMVNVLCRSSMFSQAWS-LIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFC 483
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
++ + C P +K YN VLD LL EN+ + + + M++ G+ELN+ TYN + C
Sbjct: 484 QMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVG 543
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVN------PIVPAY 850
+ + A LL +M G PD ++Y T+ + C G++K A +L+ +++ P V AY
Sbjct: 544 KFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAY 603
Query: 851 NALINGLCRHLDI 889
+L+ G+C + +
Sbjct: 604 TSLLWGICNQIGV 616
Score = 82.4 bits (202), Expect = 2e-13
Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 7/190 (3%)
Frame = +2
Query: 332 TYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDI--FISVIDSYKRAGLAEQALKTF 505
TY ++ L + +DG LL +M +G C D+ + +VI S + G E+A +
Sbjct: 186 TYNILLKALCKNNR-VDGACKLLVEMSNKG--CEPDVVSYTTVISSMSKLGKVEEARELS 242
Query: 506 YRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKN 685
R + P V +YN +++ E K + + + M + G++ NV TY+ ++ +L
Sbjct: 243 IRFQ-----PNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGI 297
Query: 686 NRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARV-----NPIVPAY 850
V+ A + +M +GCSP+ ++T+++ GR+ EA + R+ P V AY
Sbjct: 298 GNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAY 357
Query: 851 NALINGLCRH 880
N LI+GLC H
Sbjct: 358 NTLIHGLCSH 367
Score = 81.6 bits (200), Expect = 4e-13
Identities = 50/192 (26%), Positives = 89/192 (46%), Gaps = 5/192 (2%)
Frame = +2
Query: 314 FKHTHLTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQA 493
F+ + Y T+I L + + V + +M+ G S + + ++ID + +AG A
Sbjct: 350 FEPNVVAYNTLIHGLCSHGKMGEAVS-VSSKMERNGCSPNVSTYGALIDGFAKAGDLVGA 408
Query: 494 LKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKA 673
+ + ++ C P V +Y +++ L + F + M D N T+N +K
Sbjct: 409 SEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKG 468
Query: 674 LCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVNP-----I 838
LC + RV+ A L +M + GCSP+ +Y ++ L K R+KEA EL+ +
Sbjct: 469 LCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELN 528
Query: 839 VPAYNALINGLC 874
+ YN + G C
Sbjct: 529 LVTYNTIFGGFC 540
Score = 77.4 bits (189), Expect = 7e-12
Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 5/186 (2%)
Frame = +2
Query: 332 TYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYR 511
TY +ID + + + G + +M G + ++ S+++ R+ + QA +
Sbjct: 391 TYGALIDGFAKAGDLV-GASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEK 449
Query: 512 IRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNR 691
+ +C P +N + L + + I ++ M++ G N+ TYN +L L K NR
Sbjct: 450 MSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENR 509
Query: 692 VDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIAR-----VNPIVPAYNA 856
+ A L+ EM +KG + V+Y TI C +G+ +EA +L+ + V P YN
Sbjct: 510 IKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNT 569
Query: 857 LINGLC 874
L C
Sbjct: 570 LTYAYC 575
Score = 76.6 bits (187), Expect = 1e-11
Identities = 51/186 (27%), Positives = 88/186 (47%), Gaps = 5/186 (2%)
Frame = +2
Query: 335 YKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRI 514
Y +I+ +E + + V LL QM +GI + + +VI S G E AL + ++
Sbjct: 252 YNALINGFCREYKVKE-VFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKM 310
Query: 515 RDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRV 694
C P V + ++ + + I+N M ++G E NV YN L+ LC + ++
Sbjct: 311 FVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKM 370
Query: 695 DGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVN-----PIVPAYNAL 859
A + +M + GCSP+ +Y ++ K G L A E+ ++ P V Y ++
Sbjct: 371 GEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSM 430
Query: 860 INGLCR 877
+N LCR
Sbjct: 431 VNVLCR 436
Score = 75.9 bits (185), Expect = 2e-11
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 8/190 (4%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQ---QMKLEGISCSEDIFISVIDSYKRAGLAEQALK 499
+TY T+I L + V+ L +M + G S + F S++ Y G +AL
Sbjct: 285 ITYSTVISSLSG----IGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALN 340
Query: 500 TFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALC 679
+ R+ + +P V YN ++ L + K + + + M+++G NV TY L+
Sbjct: 341 IWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFA 400
Query: 680 KNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVN-----PIVP 844
K + GA + +M GC P+ V YT++V+ LC+ +A LI +++ P
Sbjct: 401 KAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTV 460
Query: 845 AYNALINGLC 874
+N I GLC
Sbjct: 461 TFNTFIKGLC 470
Score = 65.1 bits (157), Expect = 4e-08
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 5/163 (3%)
Frame = +2
Query: 404 QMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNEN 583
+M EG + + ++I G +A+ ++ C P V Y ++D
Sbjct: 344 RMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAG 403
Query: 584 KFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYT 763
I+N M +G NV Y ++ LC+++ A L+ +MS C P+ V++
Sbjct: 404 DLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFN 463
Query: 764 TIVSSLCKLGRLKEARELIARV-----NPIVPAYNALINGLCR 877
T + LC GR++ A L ++ +P + YN +++GL +
Sbjct: 464 TFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLK 506
>ref|XP_004498194.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cicer arietinum]
Length = 662
Score = 318 bits (815), Expect = 2e-84
Identities = 163/272 (59%), Positives = 204/272 (75%), Gaps = 4/272 (1%)
Frame = +2
Query: 74 MHLKEGCSLLLKVRKPQKISFLLNTQTQAIPKIILNTEKIGN----PPQNEYHVVRRLNH 241
M+LK+GCSL+LK+RK I F+LNT I N +K N P E HV+ L H
Sbjct: 1 MYLKDGCSLILKLRK-SSIPFVLNTNP------ISNLDKPNNLNPSPTIPESHVINVLKH 53
Query: 242 EKDMLVALAYFKSVANGGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGVQYLLQQMKLEG 421
E D+ +L YF S++N G FKHTHLTY+TMI+KLG+ E +D VQYLLQQMKLE
Sbjct: 54 ESDIASSLEYFTSLSNSGT-----FKHTHLTYQTMIEKLGRNCE-MDAVQYLLQQMKLES 107
Query: 422 ISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMII 601
+ CSED+FI V+DSY+RA L +QAL FYRI++F CKPTV+IYNH+LD LL N+F+MI
Sbjct: 108 VPCSEDLFICVMDSYRRANLVDQALNLFYRIKEFGCKPTVRIYNHLLDGLLGANRFKMIS 167
Query: 602 PIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSL 781
P+YNNMK +G+E NVFTYNILLKALCKN +VDGA LLVEMSKKGC PDDVSYTTI+S +
Sbjct: 168 PLYNNMKGEGLEPNVFTYNILLKALCKNGKVDGACKLLVEMSKKGCPPDDVSYTTIISCM 227
Query: 782 CKLGRLKEARELIARVNPIVPAYNALINGLCR 877
CK G++++A+EL R P+VP YNALI+G+C+
Sbjct: 228 CKSGQVEKAKELAMRFEPVVPVYNALIHGVCK 259
Score = 84.0 bits (206), Expect = 7e-14
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 10/227 (4%)
Frame = +2
Query: 224 VRRLNHEKDMLVALAYFKSVAN-----GGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGV 388
VR NH D L+ FK ++ G+ P+ TY ++ L + + +DG
Sbjct: 147 VRIYNHLLDGLLGANRFKMISPLYNNMKGEGLEPNV----FTYNILLKALCKNGK-VDGA 201
Query: 389 QYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDA 568
LL +M +G + + ++I ++G E+A + R +P V +YN ++
Sbjct: 202 CKLLVEMSKKGCPPDDVSYTTIISCMCKSGQVEKAKELAMRF-----EPVVPVYNALIHG 256
Query: 569 LLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPD 748
+ E +F + N M + GV+ NV +Y+ ++ LC +D + + +M +GCSP+
Sbjct: 257 VCKECRFNEAFDLMNEMVEKGVDPNVVSYSTVISCLCDVGNIDLSLAVFAKMVVRGCSPN 316
Query: 749 DVSYTTIVSSLCKLGRLKEAREL-----IARVNPIVPAYNALINGLC 874
++T+++ GRL +AR L V P V +YN LI+GLC
Sbjct: 317 VHTFTSLIKGYFLQGRLGDARGLWNLMIQEGVEPNVVSYNTLIHGLC 363
Score = 71.2 bits (173), Expect = 5e-10
Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 6/191 (3%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+ Y M+D L Q F D L+ M + + F + I R + A+ F
Sbjct: 423 VVYTCMVDVLCQMSMF-DQAYRLIDNMISDSCPPTVVTFNAFIKGLCRGNRVQWAIDVFD 481
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
++ ++C P ++ YN +LD L N F+ + +++ VE+N TYN ++ N
Sbjct: 482 QMEKYECLPNIRTYNELLDGLFRANGFREACGLIRELEERNVEMNSVTYNTIMYGFSFNG 541
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVN------PIVPAY 850
LL +M G D ++ V++ CKLG+++ A++++ ++ + +
Sbjct: 542 MHQQVLQLLGKMLVNGVKLDTITVNITVNAYCKLGKVRTAKQVLDKITDKKEFCADIVTH 601
Query: 851 NALINGLCRHL 883
L+ G+C L
Sbjct: 602 TILLWGICNWL 612
Score = 68.6 bits (166), Expect = 3e-09
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 5/163 (3%)
Frame = +2
Query: 404 QMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNEN 583
+M + G S + F S+I Y G A + + +P V YN ++ L +
Sbjct: 307 KMVVRGCSPNVHTFTSLIKGYFLQGRLGDARGLWNLMIQEGVEPNVVSYNTLIHGLCSNG 366
Query: 584 KFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYT 763
+I ++ M+KD NV TY+ ++ K+ + A +M GC P+ V YT
Sbjct: 367 NMDEVISVWKQMEKDCFRPNVTTYSTIIYGFAKSGNLIDACETWNKMINCGCRPNVVVYT 426
Query: 764 TIVSSLCKLGRLKEARELIARV-----NPIVPAYNALINGLCR 877
+V LC++ +A LI + P V +NA I GLCR
Sbjct: 427 CMVDVLCQMSMFDQAYRLIDNMISDSCPPTVVTFNAFIKGLCR 469
Score = 68.6 bits (166), Expect = 3e-09
Identities = 42/164 (25%), Positives = 80/164 (48%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
++Y T+I L +D V + +QM+ + + + ++I + ++G A +T+
Sbjct: 353 VSYNTLIHGLCSNGN-MDEVISVWKQMEKDCFRPNVTTYSTIIYGFAKSGNLIDACETWN 411
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
++ + C+P V +Y ++D L + F + +NM D V T+N +K LC+ N
Sbjct: 412 KMINCGCRPNVVVYTCMVDVLCQMSMFDQAYRLIDNMISDSCPPTVVTFNAFIKGLCRGN 471
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELI 820
RV A + +M K C P+ +Y ++ L + +EA LI
Sbjct: 472 RVQWAIDVFDQMEKYECLPNIRTYNELLDGLFRANGFREACGLI 515
Score = 64.7 bits (156), Expect = 5e-08
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 5/186 (2%)
Frame = +2
Query: 335 YKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRI 514
Y +I + +E F + L+ +M +G+ + + +VI G + +L F ++
Sbjct: 250 YNALIHGVCKECRFNEAFD-LMNEMVEKGVDPNVVSYSTVISCLCDVGNIDLSLAVFAKM 308
Query: 515 RDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRV 694
C P V + ++ + + ++N M ++GVE NV +YN L+ LC N +
Sbjct: 309 VVRGCSPNVHTFTSLIKGYFLQGRLGDARGLWNLMIQEGVEPNVVSYNTLIHGLCSNGNM 368
Query: 695 DGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARV-----NPIVPAYNAL 859
D + +M K P+ +Y+TI+ K G L +A E ++ P V Y +
Sbjct: 369 DEVISVWKQMEKDCFRPNVTTYSTIIYGFAKSGNLIDACETWNKMINCGCRPNVVVYTCM 428
Query: 860 INGLCR 877
++ LC+
Sbjct: 429 VDVLCQ 434
>ref|XP_006842061.1| hypothetical protein AMTR_s00078p00041370 [Amborella trichopoda]
gi|548844110|gb|ERN03736.1| hypothetical protein
AMTR_s00078p00041370 [Amborella trichopoda]
Length = 661
Score = 315 bits (807), Expect = 1e-83
Identities = 168/273 (61%), Positives = 201/273 (73%), Gaps = 1/273 (0%)
Frame = +2
Query: 74 MHLKEGCSLLLKVRKPQKISFLLNTQTQAIPKIILNTEKIGNPP-QNEYHVVRRLNHEKD 250
M LKEG +LLLKVR+P +S LLN ++ N E G+ E+ V RRL HE+D
Sbjct: 1 MVLKEGSTLLLKVRRPS-VSVLLNMNGRSGD----NKESKGSVAVPKEFEVFRRLKHEED 55
Query: 251 MLVALAYFKSVANGGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISC 430
+ VAL YFK + N FKHT LTY+ MI+KL K +DGVQYLLQQMKLEG+ C
Sbjct: 56 VNVALEYFKFITNSKG-----FKHTSLTYQLMIEKLEFAKH-MDGVQYLLQQMKLEGVPC 109
Query: 431 SEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIY 610
SEDIFI VI +Y R G+ EQALKTFYR++DF+CKPT K+YNH+ DALLNEN+FQMI PIY
Sbjct: 110 SEDIFIGVIRAYGRLGMGEQALKTFYRMQDFNCKPTTKLYNHLFDALLNENRFQMINPIY 169
Query: 611 NNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKL 790
+NMKKDGVE NV+TYNILLKALCKNNR D AH LL+EMSKK CSPD VSYTTIVS+LC+
Sbjct: 170 SNMKKDGVEPNVYTYNILLKALCKNNRTDAAHKLLIEMSKKRCSPDVVSYTTIVSALCRQ 229
Query: 791 GRLKEARELIARVNPIVPAYNALINGLCRHLDI 889
G+ +EA++L P +P YN LIN LC+ L I
Sbjct: 230 GKFQEAKDLANNFTPSIPIYNVLINSLCKELAI 262
Score = 73.9 bits (180), Expect = 8e-11
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 5/192 (2%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+ Y M++ L Q F LL+ M LE + + + I E A+
Sbjct: 422 IVYTCMVETLCQNSMFSKAWD-LLESMWLEKCPPNTVTYNTFIKGLCDNDRVECAINVLN 480
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
+ C P VK YN +L L E F + + N M G E N+ TYN ++ L
Sbjct: 481 SMNREGCLPDVKTYNALLAGLYRECNFTKALSLMNEMLDRGCEFNLVTYNTVIYGLSIAC 540
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARV-----NPIVPAYN 853
++ AH + +M +G PD ++Y T++ + CK ++ A +L+ + P V Y
Sbjct: 541 KMSEAHATMGKMVVRGIKPDIITYNTLIDAYCKDRKVSRAIQLMGFMASNGHYPDVYTYT 600
Query: 854 ALINGLCRHLDI 889
+LI GLC+ ++
Sbjct: 601 SLIFGLCKQSNL 612
Score = 69.7 bits (169), Expect = 1e-09
Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 5/187 (2%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+TY T+ID L + + + + Q M + G + F S+I R G+ AL +
Sbjct: 282 ITYTTIIDALCEMGKLTLALAFFAQ-MFVRGCEPNIITFASLIKGMFRVGIVNTALDMWD 340
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
++ C P + YN ++ L + I + + M ++ N TY+ L+ K
Sbjct: 341 KMVLGGCLPNIIAYNTLIHGLCSNGNVARAILVLHEMGENNCTPNATTYSALIDGCSKLG 400
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEAREL-----IARVNPIVPAYN 853
++GA + M GC P+ + YT +V +LC+ +A +L + + P YN
Sbjct: 401 DLEGAMDIWNNMISHGCCPNVIVYTCMVETLCQNSMFSKAWDLLESMWLEKCPPNTVTYN 460
Query: 854 ALINGLC 874
I GLC
Sbjct: 461 TFIKGLC 467
Score = 65.1 bits (157), Expect = 4e-08
Identities = 46/207 (22%), Positives = 92/207 (44%), Gaps = 5/207 (2%)
Frame = +2
Query: 275 KSVANGGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISV 454
K +AN +P Y +I+ L +E + + L+ +M+ +S + + ++
Sbjct: 236 KDLANNFTPSIP-------IYNVLINSLCKELAIEEAI-LLIDEMENHCLSPNVITYTTI 287
Query: 455 IDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGV 634
ID+ G AL F ++ C+P + + ++ + + +++ M G
Sbjct: 288 IDALCEMGKLTLALAFFAQMFVRGCEPNIITFASLIKGMFRVGIVNTALDMWDKMVLGGC 347
Query: 635 ELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARE 814
N+ YN L+ LC N V A +L EM + C+P+ +Y+ ++ KLG L+ A +
Sbjct: 348 LPNIIAYNTLIHGLCSNGNVARAILVLHEMGENNCTPNATTYSALIDGCSKLGDLEGAMD 407
Query: 815 LIARV-----NPIVPAYNALINGLCRH 880
+ + P V Y ++ LC++
Sbjct: 408 IWNNMISHGCCPNVIVYTCMVETLCQN 434
Score = 62.8 bits (151), Expect = 2e-07
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 5/186 (2%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+ Y T+I L + +L +M + + + ++ID + G E A+ +
Sbjct: 352 IAYNTLIHGLCSNGNVARAI-LVLHEMGENNCTPNATTYSALIDGCSKLGDLEGAMDIWN 410
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
+ C P V +Y +++ L + F + +M + N TYN +K LC N+
Sbjct: 411 NMISHGCCPNVIVYTCMVETLCQNSMFSKAWDLLESMWLEKCPPNTVTYNTFIKGLCDND 470
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARV-----NPIVPAYN 853
RV+ A +L M+++GC PD +Y +++ L + +A L+ + + YN
Sbjct: 471 RVECAINVLNSMNREGCLPDVKTYNALLAGLYRECNFTKALSLMNEMLDRGCEFNLVTYN 530
Query: 854 ALINGL 871
+I GL
Sbjct: 531 TVIYGL 536
>ref|XP_006404215.1| hypothetical protein EUTSA_v10010184mg [Eutrema salsugineum]
gi|557105334|gb|ESQ45668.1| hypothetical protein
EUTSA_v10010184mg [Eutrema salsugineum]
Length = 650
Score = 311 bits (796), Expect = 3e-82
Identities = 163/273 (59%), Positives = 203/273 (74%), Gaps = 2/273 (0%)
Frame = +2
Query: 74 MHLKEGCSLLLKVRKPQKISFLLNTQTQAIPKIILNTEKIGNPPQN--EYHVVRRLNHEK 247
M+LKEGCSLLLKV+KP I F+LNT K++L + NP E+ VV+RL E
Sbjct: 1 MYLKEGCSLLLKVQKPI-IPFVLNTNLTG--KLLLESP---NPATEIKEFEVVKRLRQES 54
Query: 248 DMLVALAYFKSVANGGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGIS 427
+ +AL YFKS+AN FKHT LT++ MI KL + + +D VQYLLQQMKL+G
Sbjct: 55 CVPLALQYFKSIANSN-----LFKHTPLTFEVMIRKLAGDGQ-IDSVQYLLQQMKLQGFQ 108
Query: 428 CSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPI 607
CSED+F++VI Y++ GLAE+A++ FYRI++F C P+VKIYNHVLD LL EN+FQMI +
Sbjct: 109 CSEDLFVNVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRFQMIYTV 168
Query: 608 YNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCK 787
Y NMK+DG E NVFTYN+LLKALCKNN+VDGA LLVEMS KGCSPD VSYTT++SS+C+
Sbjct: 169 YRNMKRDGFEPNVFTYNVLLKALCKNNKVDGAQKLLVEMSNKGCSPDAVSYTTVISSMCE 228
Query: 788 LGRLKEARELIARVNPIVPAYNALINGLCRHLD 886
LG +KE REL AR P+V YNALINGLC+ D
Sbjct: 229 LGMVKEGRELAARFEPVVSVYNALINGLCKDHD 261
Score = 79.0 bits (193), Expect = 2e-12
Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Frame = +2
Query: 443 FISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMK 622
F +++ + G E+AL F + + C P ++ Y +++ + + I+N M
Sbjct: 355 FNTLVQGFCSFGNMEKALSVFSHMEENGCSPNIRTYGSLMNGFAKRGSLEGAVEIWNKML 414
Query: 623 KDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLK 802
G NV Y +++ALC++++ A L+ MSK+ C+P ++ + LC GRL
Sbjct: 415 THGCSPNVVVYTSMVQALCRHSKFKEAESLIEIMSKENCAPSVTTFNAFIKGLCDAGRLD 474
Query: 803 EARELIARVN------PIVPAYNALINGLCR 877
A ++ ++ P + YN L++GL +
Sbjct: 475 WAEKVFRQMEQQYGCPPNIVTYNELLDGLSK 505
Score = 78.2 bits (191), Expect = 4e-12
Identities = 54/225 (24%), Positives = 104/225 (46%), Gaps = 6/225 (2%)
Frame = +2
Query: 218 HVVRRLNHEKDMLVALAYFKSVANGGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGVQYL 397
HV+ L E + ++++ G F+ TY ++ L + + +DG Q L
Sbjct: 151 HVLDTLLGENRFQMIYTVYRNMKRDG------FEPNVFTYNVLLKALCKNNK-VDGAQKL 203
Query: 398 LQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLN 577
L +M +G S + +VI S G+ ++ + R +P V +YN +++ L
Sbjct: 204 LVEMSNKGCSPDAVSYTTVISSMCELGMVKEGRELAARF-----EPVVSVYNALINGLCK 258
Query: 578 ENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVS 757
++ + + M + G+ NV +Y+ L+ ALC + ++ + LL +M K+GC P+ +
Sbjct: 259 DHDHEGAFELMREMVEKGISPNVISYSTLINALCNSGEIELSFSLLAQMLKRGCHPNIHT 318
Query: 758 YTTIVSSLCKLGRLKEARELIAR------VNPIVPAYNALINGLC 874
+++V G + +L R + P V A+N L+ G C
Sbjct: 319 LSSLVKGCFVRGTTVDVLDLWNRMITGFELLPNVVAFNTLVQGFC 363
Score = 77.4 bits (189), Expect = 7e-12
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 6/188 (3%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
++Y T+I+ L E L Q +K G + S++ G L +
Sbjct: 282 ISYSTLINALCNSGEIELSFSLLAQMLK-RGCHPNIHTLSSLVKGCFVRGTTVDVLDLWN 340
Query: 509 R-IRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKN 685
R I F+ P V +N ++ + + + ++++M+++G N+ TY L+ K
Sbjct: 341 RMITGFELLPNVVAFNTLVQGFCSFGNMEKALSVFSHMEENGCSPNIRTYGSLMNGFAKR 400
Query: 686 NRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVN-----PIVPAY 850
++GA + +M GCSP+ V YT++V +LC+ + KEA LI ++ P V +
Sbjct: 401 GSLEGAVEIWNKMLTHGCSPNVVVYTSMVQALCRHSKFKEAESLIEIMSKENCAPSVTTF 460
Query: 851 NALINGLC 874
NA I GLC
Sbjct: 461 NAFIKGLC 468
Score = 74.7 bits (182), Expect = 4e-11
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Frame = +2
Query: 413 LEGISCSEDI--FISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENK 586
+E CS +I + S+++ + + G E A++ + ++ C P V +Y ++ AL +K
Sbjct: 378 MEENGCSPNIRTYGSLMNGFAKRGSLEGAVEIWNKMLTHGCSPNVVVYTSMVQALCRHSK 437
Query: 587 FQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKK-GCSPDDVSYT 763
F+ + M K+ +V T+N +K LC R+D A + +M ++ GC P+ V+Y
Sbjct: 438 FKEAESLIEIMSKENCAPSVTTFNAFIKGLCDAGRLDWAEKVFRQMEQQYGCPPNIVTYN 497
Query: 764 TIVSSLCKLGRLKEA----RELIAR-VNPIVPAYNALINGLC 874
++ L K R++EA RE+ R V YN L++G C
Sbjct: 498 ELLDGLSKTNRIEEAYGLTREISMRGVEWSSTTYNTLLHGSC 539
Score = 71.6 bits (174), Expect = 4e-10
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 8/190 (4%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+ Y +M+ L + +F + + L++ M E + S F + I AG + A K F
Sbjct: 423 VVYTSMVQALCRHSKFKEA-ESLIEIMSKENCAPSVTTFNAFIKGLCDAGRLDWAEKVFR 481
Query: 509 RI-RDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKN 685
++ + + C P + YN +LD L N+ + + + GVE + TYN LL C
Sbjct: 482 QMEQQYGCPPNIVTYNELLDGLSKTNRIEEAYGLTREISMRGVEWSSTTYNTLLHGSCNA 541
Query: 686 NRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVN-------PIVP 844
A L+ +M G SPD+++ ++ + CK G+ + A +++ +V+ P V
Sbjct: 542 GLPGIALQLVGKMVVDGKSPDEITMNMMMLAYCKQGKAERAVQMLDQVSCGGRKWQPDVI 601
Query: 845 AYNALINGLC 874
+Y +I GLC
Sbjct: 602 SYTNVIWGLC 611
>ref|XP_006290741.1| hypothetical protein CARUB_v10016837mg [Capsella rubella]
gi|482559448|gb|EOA23639.1| hypothetical protein
CARUB_v10016837mg [Capsella rubella]
Length = 634
Score = 303 bits (775), Expect = 8e-80
Identities = 161/271 (59%), Positives = 197/271 (72%)
Frame = +2
Query: 74 MHLKEGCSLLLKVRKPQKISFLLNTQTQAIPKIILNTEKIGNPPQNEYHVVRRLNHEKDM 253
M+LKEGCSLLLKV+KP I F+LNT + L TE + E VV+RL E +
Sbjct: 1 MYLKEGCSLLLKVQKPL-IPFVLNTNLS----VNLLTEAPKHDEIKESDVVKRLRQESCV 55
Query: 254 LVALAYFKSVANGGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCS 433
+AL +FKSVAN FKHT T++ MI KL + + +D VQYLLQQMKL+G CS
Sbjct: 56 PLALHFFKSVANSN-----LFKHTPFTFEVMIRKLAMDGQ-VDSVQYLLQQMKLQGFHCS 109
Query: 434 EDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYN 613
ED+FISVI Y++ GLAE+A++ FYRI++F C P+VKIYNHVLD LL EN+ QMI +Y
Sbjct: 110 EDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYTVYR 169
Query: 614 NMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLG 793
+MK+DG E NVFTYNILLKALCKNN+VDGA LLVEMS KGCSPD VSYTT++SS+C+LG
Sbjct: 170 DMKRDGFEPNVFTYNILLKALCKNNKVDGAKKLLVEMSNKGCSPDAVSYTTVISSMCELG 229
Query: 794 RLKEARELIARVNPIVPAYNALINGLCRHLD 886
+KE REL R P+V YNALINGLC+ D
Sbjct: 230 MVKEGRELAVRFEPVVSVYNALINGLCKDHD 260
Score = 79.3 bits (194), Expect = 2e-12
Identities = 55/227 (24%), Positives = 104/227 (45%), Gaps = 6/227 (2%)
Frame = +2
Query: 218 HVVRRLNHEKDMLVALAYFKSVANGGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGVQYL 397
HV+ L E + + ++ + G F+ TY ++ L + + +DG + L
Sbjct: 150 HVLDTLLGENRIQMIYTVYRDMKRDG------FEPNVFTYNILLKALCKNNK-VDGAKKL 202
Query: 398 LQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLN 577
L +M +G S + +VI S G+ ++ + R +P V +YN +++ L
Sbjct: 203 LVEMSNKGCSPDAVSYTTVISSMCELGMVKEGRELAVRF-----EPVVSVYNALINGLCK 257
Query: 578 ENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVS 757
++ ++ + M + G+ NV +Y+ L+ LC + ++ A LL +M K+GC P+ +
Sbjct: 258 DHDYKGAFDLMREMVEKGISPNVISYSTLINVLCNSGHLELAFSLLAQMLKRGCHPNIHT 317
Query: 758 YTTIVSSLCKLGRLKEARELIAR------VNPIVPAYNALINGLCRH 880
++ V G +A + R + P V A+N LI G C H
Sbjct: 318 LSSFVKGCFVKGTTVDALDSWNRMIRQFELQPNVVAFNTLIQGFCSH 364
Score = 79.0 bits (193), Expect = 2e-12
Identities = 44/179 (24%), Positives = 86/179 (48%), Gaps = 6/179 (3%)
Frame = +2
Query: 359 GQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPT 538
G + LD +++Q +L+ + F ++I + G E+AL F + + C P
Sbjct: 329 GTTVDALDSWNRMIRQFELQPNVVA---FNTLIQGFCSHGNMEKALSVFSHMEENRCSPN 385
Query: 539 VKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLV 718
++ Y +++ + + I+N M +G NV Y +++ALC++++ A L+
Sbjct: 386 IRTYGSLINGFAKRGSLEGAVYIWNKMLTNGCSPNVVVYTNMVEALCRHSKFKEAESLIE 445
Query: 719 EMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVN------PIVPAYNALINGLCR 877
MSK+ C+P ++ + LC GRL A ++ + P + YN L++GL +
Sbjct: 446 IMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRHMEQQYKCPPNIVTYNELLDGLAK 504
Score = 73.9 bits (180), Expect = 8e-11
Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+ Y M++ L + +F + + L++ M E + S F + I AG + A K F
Sbjct: 422 VVYTNMVEALCRHSKFKEA-ESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFR 480
Query: 509 RI-RDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKN 685
+ + + C P + YN +LD L N+ + + + GVE ++ TYN LL C
Sbjct: 481 HMEQQYKCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSLSTYNTLLHGSCNA 540
Query: 686 NRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVN-------PIVP 844
A L+ +M G SPD+++ I+ + CK G+ + A +++ V+ P V
Sbjct: 541 GLPGTALQLVGKMIVDGKSPDEITMNMILLAYCKQGKAERAIQMLDLVSCGRRKWRPDVI 600
Query: 845 AYNALINGLCR 877
+Y ++ GLCR
Sbjct: 601 SYTNVLWGLCR 611
>ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g48810 gi|7576219|emb|CAB87909.1| putative protein
[Arabidopsis thaliana] gi|332644937|gb|AEE78458.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 659
Score = 300 bits (767), Expect = 7e-79
Identities = 158/271 (58%), Positives = 196/271 (72%)
Frame = +2
Query: 74 MHLKEGCSLLLKVRKPQKISFLLNTQTQAIPKIILNTEKIGNPPQNEYHVVRRLNHEKDM 253
M+LKEGCSLLLKV+KP I F+LNT L TE + E VV+RL E +
Sbjct: 1 MYLKEGCSLLLKVQKPL-IPFVLNTNLNVNH---LLTESPNHAEIKELDVVKRLRQESCV 56
Query: 254 LVALAYFKSVANGGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCS 433
+AL +FKS+AN FKHT LT++ MI KL + + +D VQYLLQQMKL+G CS
Sbjct: 57 PLALHFFKSIANSN-----LFKHTPLTFEVMIRKLAMDGQ-VDSVQYLLQQMKLQGFHCS 110
Query: 434 EDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYN 613
ED+FISVI Y++ GLAE+A++ FYRI++F C P+VKIYNHVLD LL EN+ QMI +Y
Sbjct: 111 EDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYR 170
Query: 614 NMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLG 793
+MK+DG E NVFTYN+LLKALCKNN+VDGA LLVEMS KGC PD VSYTT++SS+C++G
Sbjct: 171 DMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVG 230
Query: 794 RLKEARELIARVNPIVPAYNALINGLCRHLD 886
+KE REL R P+V YNALINGLC+ D
Sbjct: 231 LVKEGRELAERFEPVVSVYNALINGLCKEHD 261
Score = 82.8 bits (203), Expect = 2e-13
Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 8/190 (4%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFI--SVIDSYKRAGLAEQALKT 502
++Y T+I+ L + +L Q +K C +I+ S++ G AL
Sbjct: 282 ISYSTLINVLCNSGQIELAFSFLTQMLKR---GCHPNIYTLSSLVKGCFLRGTTFDALDL 338
Query: 503 FYR-IRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALC 679
+ + IR F +P V YN ++ + + ++++M++ G N+ TY L+
Sbjct: 339 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398
Query: 680 KNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVN-----PIVP 844
K +DGA + +M GC P+ V YT +V +LC+ + KEA LI ++ P VP
Sbjct: 399 KRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVP 458
Query: 845 AYNALINGLC 874
+NA I GLC
Sbjct: 459 TFNAFIKGLC 468
Score = 82.4 bits (202), Expect = 2e-13
Identities = 56/230 (24%), Positives = 107/230 (46%), Gaps = 6/230 (2%)
Frame = +2
Query: 218 HVVRRLNHEKDMLVALAYFKSVANGGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGVQYL 397
HV+ L E + + ++ + G F+ TY ++ L + + +DG + L
Sbjct: 151 HVLDTLLGENRIQMIYMVYRDMKRDG------FEPNVFTYNVLLKALCKNNK-VDGAKKL 203
Query: 398 LQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLN 577
L +M +G + +VI S GL ++ + R +P V +YN +++ L
Sbjct: 204 LVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNALINGLCK 258
Query: 578 ENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVS 757
E+ ++ + M + G+ NV +Y+ L+ LC + +++ A L +M K+GC P+ +
Sbjct: 259 EHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYT 318
Query: 758 YTTIVSSLCKLGRLKEARELIAR------VNPIVPAYNALINGLCRHLDI 889
+++V G +A +L + + P V AYN L+ G C H +I
Sbjct: 319 LSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNI 368
Score = 73.2 bits (178), Expect = 1e-10
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 8/191 (4%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+ Y M++ L + +F + + L++ M E + S F + I AG + A K F
Sbjct: 423 VVYTNMVEALCRHSKFKEA-ESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFR 481
Query: 509 RI-RDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKN 685
++ + C P + YN +LD L N+ + + + GVE + TYN LL C
Sbjct: 482 QMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNA 541
Query: 686 NRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVN-------PIVP 844
A L+ +M G SPD+++ I+ + CK G+ + A +++ V+ P V
Sbjct: 542 GLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVI 601
Query: 845 AYNALINGLCR 877
+Y +I GLCR
Sbjct: 602 SYTNVIWGLCR 612
Score = 72.4 bits (176), Expect = 2e-10
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 6/172 (3%)
Frame = +2
Query: 380 DGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHV 559
D + Q ++ G+ + + +++ + G +A+ F + + C P ++ Y +
Sbjct: 334 DALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL 393
Query: 560 LDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGC 739
++ + I+N M G NV Y +++ALC++++ A L+ MSK+ C
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453
Query: 740 SPDDVSYTTIVSSLCKLGRLKEARELIA------RVNPIVPAYNALINGLCR 877
+P ++ + LC GRL A ++ R P + YN L++GL +
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAK 505
>ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 806
Score = 298 bits (764), Expect = 1e-78
Identities = 155/268 (57%), Positives = 196/268 (73%)
Frame = +2
Query: 74 MHLKEGCSLLLKVRKPQKISFLLNTQTQAIPKIILNTEKIGNPPQNEYHVVRRLNHEKDM 253
M+L+ GCSLLLK RK F+L T LN P +E HVV+ L E D+
Sbjct: 1 MNLRNGCSLLLKPRK-SPTPFVLATNPNPEKANSLNV-----CPVSESHVVKVLRQEHDI 54
Query: 254 LVALAYFKSVANGGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCS 433
+ +L YFKS++N G FKHTHLTY+TMIDKLG+ E +DGV YLLQQMKLE + CS
Sbjct: 55 VSSLEYFKSLSNSGT-----FKHTHLTYETMIDKLGRNNE-MDGVSYLLQQMKLENVPCS 108
Query: 434 EDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYN 613
+++F VI Y+R+ L EQ LK FYRIR+F C+P+VKIYN VLDALL++N F+MI +YN
Sbjct: 109 QELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYN 168
Query: 614 NMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLG 793
NMK +G+E NVFTYN+LLKALC+N +VDGA LLVEMS KGC PDDVSYTT++SS+CKLG
Sbjct: 169 NMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLG 228
Query: 794 RLKEARELIARVNPIVPAYNALINGLCR 877
+ +AREL + P+VP YNALI+G+C+
Sbjct: 229 DVDKARELAMKFEPVVPVYNALIHGVCK 256
Score = 72.8 bits (177), Expect = 2e-10
Identities = 42/164 (25%), Positives = 81/164 (49%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+ Y T+I L + + + + QM+ + I + + ++I + ++G A +T+
Sbjct: 350 VAYNTLIHGLCSDGNMDEAIS-VWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWN 408
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
++ + C+P V +Y ++D L + F + +NM DG V T+N +K LC+
Sbjct: 409 KMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAG 468
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELI 820
RV+ A +L +M K C P+ +Y ++ L + +EA LI
Sbjct: 469 RVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLI 512
Score = 72.8 bits (177), Expect = 2e-10
Identities = 45/168 (26%), Positives = 79/168 (47%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+ Y M+D L Q F D L+ M +G + F + I RAG E A+
Sbjct: 420 VVYTCMVDVLCQMSMF-DQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLD 478
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
++ ++C P ++ YN +LD L N F+ + +++ VE + TYN ++ N
Sbjct: 479 QMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNG 538
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVN 832
LL +M G D ++ T V++ CKLG++K A +++ ++
Sbjct: 539 MHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNIS 586
Score = 72.4 bits (176), Expect = 2e-10
Identities = 51/186 (27%), Positives = 93/186 (50%), Gaps = 5/186 (2%)
Frame = +2
Query: 332 TYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYR 511
TY ++ L Q + +DG LL +M +G + + +VI S + G ++A + +
Sbjct: 181 TYNVLLKALCQNGK-VDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMK 239
Query: 512 IRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNR 691
+P V +YN ++ + E +F+ + N M GV+ NV +Y+ ++ L
Sbjct: 240 F-----EPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGN 294
Query: 692 VDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEA---RELIAR--VNPIVPAYNA 856
V+ + + M +GC P+ ++T+++ GR+ +A L+ R V+P V AYN
Sbjct: 295 VELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNT 354
Query: 857 LINGLC 874
LI+GLC
Sbjct: 355 LIHGLC 360
Score = 68.2 bits (165), Expect = 4e-09
Identities = 46/186 (24%), Positives = 84/186 (45%), Gaps = 5/186 (2%)
Frame = +2
Query: 335 YKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRI 514
Y +I + +E F + L+ +M G+ + + +VI G E +L F R+
Sbjct: 247 YNALIHGVCKECRFKEAFD-LMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRM 305
Query: 515 RDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRV 694
C+P V+ + ++ + + ++N M ++GV NV YN L+ LC + +
Sbjct: 306 FVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNM 365
Query: 695 DGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARV-----NPIVPAYNAL 859
D A + +M K P+ +Y+TI+ K G L A E ++ P V Y +
Sbjct: 366 DEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCM 425
Query: 860 INGLCR 877
++ LC+
Sbjct: 426 VDVLCQ 431
Score = 67.0 bits (162), Expect = 9e-09
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 5/163 (3%)
Frame = +2
Query: 404 QMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNEN 583
+M + G + F S+I + G A+ + + P V YN ++ L ++
Sbjct: 304 RMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDG 363
Query: 584 KFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYT 763
I ++N M+KD + NV TY+ ++ K+ + A +M GC P+ V YT
Sbjct: 364 NMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYT 423
Query: 764 TIVSSLCKLGRLKEARELIARV-----NPIVPAYNALINGLCR 877
+V LC++ +A +LI + P V +N I GLCR
Sbjct: 424 CMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCR 466
Score = 63.2 bits (152), Expect = 1e-07
Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Frame = +2
Query: 416 EGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQM 595
EG+S + + ++I G ++A+ + ++ +P V Y+ ++
Sbjct: 343 EGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVS 402
Query: 596 IIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVS 775
+N M G NV Y ++ LC+ + D A L+ M GC P +++ +
Sbjct: 403 ACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIK 462
Query: 776 SLCKLGRLKEARELIARVN-----PIVPAYNALINGLCR 877
LC+ GR++ A ++ ++ P + YN L++GL R
Sbjct: 463 GLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFR 501
>ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297321765|gb|EFH52186.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 657
Score = 297 bits (760), Expect = 4e-78
Identities = 155/271 (57%), Positives = 197/271 (72%)
Frame = +2
Query: 74 MHLKEGCSLLLKVRKPQKISFLLNTQTQAIPKIILNTEKIGNPPQNEYHVVRRLNHEKDM 253
M+LKEGCSLLLKV+KP I F+LNT + L TE + E V++RL E +
Sbjct: 1 MYLKEGCSLLLKVQKPL-IPFVLNTNLN----VNLLTESPNHAEIKESAVLKRLRQESCV 55
Query: 254 LVALAYFKSVANGGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCS 433
+AL +FKS+AN FKHT LT++ MI KL + + +D VQYLLQQMKL+G CS
Sbjct: 56 PLALHFFKSIANSN-----LFKHTPLTFEVMIRKLAMDGQ-VDSVQYLLQQMKLQGFHCS 109
Query: 434 EDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYN 613
ED+FISVI Y++ GLAE+A++ FYRI++F C P+VKIYNHVLD LL EN+ QMI +Y
Sbjct: 110 EDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYR 169
Query: 614 NMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLG 793
+MK+DG E NVFTYN+LLKALCKNN+VDGA LLVEMS KGC P+ VSYTT++SS+C++G
Sbjct: 170 DMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVG 229
Query: 794 RLKEARELIARVNPIVPAYNALINGLCRHLD 886
+KE R+L R P+V YNALINGLC+ D
Sbjct: 230 MVKEGRQLAERFEPVVSVYNALINGLCKERD 260
Score = 77.8 bits (190), Expect = 5e-12
Identities = 54/230 (23%), Positives = 109/230 (47%), Gaps = 6/230 (2%)
Frame = +2
Query: 218 HVVRRLNHEKDMLVALAYFKSVANGGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGVQYL 397
HV+ L E + + ++ + G F+ TY ++ L + + +DG + L
Sbjct: 150 HVLDTLLGENRIQMIYMVYRDMKRDG------FEPNVFTYNVLLKALCKNNK-VDGAKKL 202
Query: 398 LQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLN 577
L +M +G + + +VI S G+ ++ + R +P V +YN +++ L
Sbjct: 203 LVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERF-----EPVVSVYNALINGLCK 257
Query: 578 ENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVS 757
E ++ + + + M + G+ NV +Y+ L+ L + +++ A LL +M K+GC P+ +
Sbjct: 258 ERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHT 317
Query: 758 YTTIVSSLCKLGRLKEARELIAR------VNPIVPAYNALINGLCRHLDI 889
+++V G +A ++ + + P V AYN L+ G C H +I
Sbjct: 318 LSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNI 367
Score = 75.5 bits (184), Expect = 3e-11
Identities = 39/172 (22%), Positives = 81/172 (47%), Gaps = 6/172 (3%)
Frame = +2
Query: 380 DGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHV 559
D + Q ++ G+ + + +++ + G ++A+ F + + C P ++ Y +
Sbjct: 333 DALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSL 392
Query: 560 LDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGC 739
++ + + I+N M G NV Y +++ALC++++ A L+ MSK+ C
Sbjct: 393 INGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENC 452
Query: 740 SPDDVSYTTIVSSLCKLGRLKEARELIA------RVNPIVPAYNALINGLCR 877
+P ++ + LC GRL A ++ R P + YN L++GL +
Sbjct: 453 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAK 504
Score = 75.5 bits (184), Expect = 3e-11
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 8/191 (4%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+ Y +M++ L + +F + + L++ M E + S F + I AG + A K F
Sbjct: 422 VVYTSMVEALCRHSKFKEA-ESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFR 480
Query: 509 RI-RDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKN 685
++ + + C P + YN +LD L N+ + + + GVE + TYN LL C
Sbjct: 481 QMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNA 540
Query: 686 NRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVN-------PIVP 844
A L+ +M G SPD+++ I+ + CK G+ + A +++ V+ P V
Sbjct: 541 GLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDVI 600
Query: 845 AYNALINGLCR 877
+Y +I GLCR
Sbjct: 601 SYTNVIWGLCR 611
Score = 75.1 bits (183), Expect = 3e-11
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 8/164 (4%)
Frame = +2
Query: 407 MKLEGISCSEDI--FISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNE 580
+ +E I CS +I + S+I+ + + G E A+ + ++ C P V +Y +++AL
Sbjct: 375 LHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRH 434
Query: 581 NKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKK-GCSPDDVS 757
+KF+ + M K+ +V T+N +K LC R+D A + +M ++ C P+ V+
Sbjct: 435 SKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVT 494
Query: 758 YTTIVSSLCKLGRLKEA----RELIAR-VNPIVPAYNALINGLC 874
Y ++ L K R++EA RE+ R V YN L++G C
Sbjct: 495 YNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSC 538
>ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 295 bits (754), Expect = 2e-77
Identities = 152/268 (56%), Positives = 198/268 (73%)
Frame = +2
Query: 74 MHLKEGCSLLLKVRKPQKISFLLNTQTQAIPKIILNTEKIGNPPQNEYHVVRRLNHEKDM 253
M+LKEG SLL+K++KP I F+LN+ P+ + + E V++RL ++++
Sbjct: 1 MYLKEGRSLLMKIQKPL-IPFVLNSNPIINPRDPNKQQLL-----QESDVLKRLKTDRNL 54
Query: 254 LVALAYFKSVANGGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCS 433
L +F ++AN F+HT TY+ MI++LG+E E +D VQY+LQQMK++GI+C
Sbjct: 55 SSVLGFFSAIANSNA-----FQHTASTYRVMIERLGRECE-MDMVQYILQQMKMDGINCC 108
Query: 434 EDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYN 613
ED+FI +I+ YKR G AEQALK FYRI +F CKPTV+IYNH+LDALL+ENKFQMI P+Y
Sbjct: 109 EDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYT 168
Query: 614 NMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLG 793
NMKKDG+ NVFTYNILLKALCKN+RVD AH L VEMS KGC PD V+YTT+VSSLCK G
Sbjct: 169 NMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAG 228
Query: 794 RLKEARELIARVNPIVPAYNALINGLCR 877
++ +AREL R P VP YNALI+G+C+
Sbjct: 229 KIDDARELAGRFKPSVPVYNALIDGMCK 256
Score = 95.5 bits (236), Expect = 2e-17
Identities = 56/193 (29%), Positives = 99/193 (51%), Gaps = 6/193 (3%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+TY M+D L + F D L+++M LEG + + F + I G E A+K
Sbjct: 420 VTYTCMVDVLCKNSMF-DQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLE 478
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
R++ C P + YN +LDAL NK++ ++ ++ ++ N+ TYN +L +
Sbjct: 479 RMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAG 538
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARV------NPIVPAY 850
+ A L + +G +PD ++Y T++ + CK G++K A +L+ RV +P + Y
Sbjct: 539 MMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITY 598
Query: 851 NALINGLCRHLDI 889
+LI G C ++I
Sbjct: 599 TSLIWGACNWMNI 611
Score = 80.9 bits (198), Expect = 6e-13
Identities = 59/227 (25%), Positives = 107/227 (47%), Gaps = 10/227 (4%)
Frame = +2
Query: 224 VRRLNHEKDMLVALAYFKSVAN-----GGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGV 388
VR NH D L++ F+ + D +P+ TY ++ L + +D
Sbjct: 144 VRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNV----FTYNILLKALCKNDR-VDAA 198
Query: 389 QYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDA 568
L +M +G + +++ S +AG + A + R KP+V +YN ++D
Sbjct: 199 HKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF-----KPSVPVYNALIDG 253
Query: 569 LLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPD 748
+ E + ++ I + M +GV+ NV +Y+ ++ +LC + V+ A L +M +GC +
Sbjct: 254 MCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDAN 313
Query: 749 DVSYTTIVSSLCKLGRLKEARELIARV-----NPIVPAYNALINGLC 874
++T ++ G+L EA +L + P V AYN LI+GLC
Sbjct: 314 IHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360
Score = 80.1 bits (196), Expect = 1e-12
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 5/188 (2%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+ Y T+I L + +Q + QM+ G + + +ID + ++G A +T+
Sbjct: 350 VAYNTLIHGLCSNGSLEEALQ-VCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWN 408
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
R+ C+P V Y ++D L + F + M +G N T+N +K LC N
Sbjct: 409 RMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNG 468
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEA----RELIAR-VNPIVPAYN 853
RV+ A LL M GC P+ +Y ++ +L ++ + +EA +E+ AR + P + YN
Sbjct: 469 RVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYN 528
Query: 854 ALINGLCR 877
++ G R
Sbjct: 529 TVLYGFSR 536
Score = 73.2 bits (178), Expect = 1e-10
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 5/165 (3%)
Frame = +2
Query: 395 LLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALL 574
L QM L G + F +I G +AL + + C+P V YN ++ L
Sbjct: 301 LFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360
Query: 575 NENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDV 754
+ + + + + M++ G NV TY+IL+ K+ + GA M GC P+ V
Sbjct: 361 SNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420
Query: 755 SYTTIVSSLCKLGRLKEARELIARV-----NPIVPAYNALINGLC 874
+YT +V LCK +A L+ ++ P +N I GLC
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLC 465
Score = 68.6 bits (166), Expect = 3e-09
Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 5/194 (2%)
Frame = +2
Query: 314 FKHTHLTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQA 493
FK + Y +ID + +E ++ LL +M G+ + + +I+S +G E A
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIK-LLGEMMDNGVDPNVVSYSCIINSLCVSGNVELA 298
Query: 494 LKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKA 673
F ++ C + + ++ K + ++ M +DG E NV YN L+
Sbjct: 299 FALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHG 358
Query: 674 LCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARV-----NPI 838
LC N ++ A + +M + GC P+ +Y+ ++ K G L A E R+ P
Sbjct: 359 LCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPN 418
Query: 839 VPAYNALINGLCRH 880
V Y +++ LC++
Sbjct: 419 VVTYTCMVDVLCKN 432
>ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 295 bits (754), Expect = 2e-77
Identities = 152/268 (56%), Positives = 198/268 (73%)
Frame = +2
Query: 74 MHLKEGCSLLLKVRKPQKISFLLNTQTQAIPKIILNTEKIGNPPQNEYHVVRRLNHEKDM 253
M+LKEG SLL+K++KP I F+LN+ P+ + + E V++RL ++++
Sbjct: 1 MYLKEGRSLLMKIQKPL-IPFVLNSNPIINPRDPNKQQLL-----QESDVLKRLKTDRNL 54
Query: 254 LVALAYFKSVANGGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCS 433
L +F ++AN F+HT TY+ MI++LG+E E +D VQY+LQQMK++GI+C
Sbjct: 55 SSVLGFFSAIANSNA-----FQHTASTYRVMIERLGRECE-MDMVQYILQQMKMDGINCC 108
Query: 434 EDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYN 613
ED+FI +I+ YKR G AEQALK FYRI +F CKPTV+IYNH+LDALL+ENKFQMI P+Y
Sbjct: 109 EDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYT 168
Query: 614 NMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLG 793
NMKKDG+ NVFTYNILLKALCKN+RVD AH L VEMS KGC PD V+YTT+VSSLCK G
Sbjct: 169 NMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAG 228
Query: 794 RLKEARELIARVNPIVPAYNALINGLCR 877
++ +AREL R P VP YNALI+G+C+
Sbjct: 229 KIDDARELAGRFKPSVPVYNALIDGMCK 256
Score = 95.5 bits (236), Expect = 2e-17
Identities = 56/193 (29%), Positives = 99/193 (51%), Gaps = 6/193 (3%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+TY M+D L + F D L+++M LEG + + F + I G E A+K
Sbjct: 420 VTYTCMVDVLCKNSMF-DQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLE 478
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
R++ C P + YN +LDAL NK++ ++ ++ ++ N+ TYN +L +
Sbjct: 479 RMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAG 538
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARV------NPIVPAY 850
+ A L + +G +PD ++Y T++ + CK G++K A +L+ RV +P + Y
Sbjct: 539 MMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITY 598
Query: 851 NALINGLCRHLDI 889
+LI G C ++I
Sbjct: 599 TSLIWGACNWMNI 611
Score = 80.9 bits (198), Expect = 6e-13
Identities = 59/227 (25%), Positives = 107/227 (47%), Gaps = 10/227 (4%)
Frame = +2
Query: 224 VRRLNHEKDMLVALAYFKSVAN-----GGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGV 388
VR NH D L++ F+ + D +P+ TY ++ L + +D
Sbjct: 144 VRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNV----FTYNILLKALCKNDR-VDAA 198
Query: 389 QYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDA 568
L +M +G + +++ S +AG + A + R KP+V +YN ++D
Sbjct: 199 HKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF-----KPSVPVYNALIDG 253
Query: 569 LLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPD 748
+ E + ++ I + M +GV+ NV +Y+ ++ +LC + V+ A L +M +GC +
Sbjct: 254 MCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDAN 313
Query: 749 DVSYTTIVSSLCKLGRLKEARELIARV-----NPIVPAYNALINGLC 874
++T ++ G+L EA +L + P V AYN LI+GLC
Sbjct: 314 IHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360
Score = 80.1 bits (196), Expect = 1e-12
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 5/188 (2%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+ Y T+I L + +Q + QM+ G + + +ID + ++G A +T+
Sbjct: 350 VAYNTLIHGLCSNGSLEEALQ-VCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWN 408
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
R+ C+P V Y ++D L + F + M +G N T+N +K LC N
Sbjct: 409 RMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNG 468
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEA----RELIAR-VNPIVPAYN 853
RV+ A LL M GC P+ +Y ++ +L ++ + +EA +E+ AR + P + YN
Sbjct: 469 RVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYN 528
Query: 854 ALINGLCR 877
++ G R
Sbjct: 529 TVLYGFSR 536
Score = 73.6 bits (179), Expect = 1e-10
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 5/165 (3%)
Frame = +2
Query: 395 LLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALL 574
L QM L G + F +I G +AL + + C+P V YN ++ L
Sbjct: 301 LFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360
Query: 575 NENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDV 754
+ + + + + M++ G NV TY+IL+ K+ + GA M GC P+ V
Sbjct: 361 SNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420
Query: 755 SYTTIVSSLCKLGRLKEARELIARV-----NPIVPAYNALINGLC 874
+YT +V LCK +A L+ ++ P +N I GLC
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLC 465
Score = 68.6 bits (166), Expect = 3e-09
Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 5/194 (2%)
Frame = +2
Query: 314 FKHTHLTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQA 493
FK + Y +ID + +E ++ LL +M G+ + + +I+S +G E A
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIK-LLGEMMDNGVDPNVVSYSCIINSLCVSGNVELA 298
Query: 494 LKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKA 673
F ++ C + + ++ K + ++ M +DG E NV YN L+
Sbjct: 299 FALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHG 358
Query: 674 LCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARV-----NPI 838
LC N ++ A + +M + GC P+ +Y+ ++ K G L A E R+ P
Sbjct: 359 LCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPN 418
Query: 839 VPAYNALINGLCRH 880
V Y +++ LC++
Sbjct: 419 VVTYTCMVDVLCKN 432
>ref|XP_007035867.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao] gi|508714896|gb|EOY06793.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative [Theobroma cacao]
Length = 664
Score = 292 bits (747), Expect = 1e-76
Identities = 162/268 (60%), Positives = 194/268 (72%), Gaps = 1/268 (0%)
Frame = +2
Query: 74 MHLKEGCSLLLKVRKPQKISFLLNTQTQAIPKIILNTEKIGNPPQ-NEYHVVRRLNHEKD 250
M+LKEG SLLLKV+KP I F+LNT P TE N Q E V+ RL E +
Sbjct: 1 MYLKEGRSLLLKVQKPS-IPFILNTNPLLKPHKESQTEP--NQTQLEESQVLSRLKQEPN 57
Query: 251 MLVALAYFKSVANGGDAEVPHFKHTHLTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISC 430
M +AL YFKS+AN FKHT TY+ MI KL E E +DG+QYLL QMKLE ISC
Sbjct: 58 MSLALNYFKSIANSNS-----FKHTPETYQCMIQKLALESE-IDGIQYLLHQMKLERISC 111
Query: 431 SEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIY 610
SED+F+ VIDSY R GL EQALK FYRI++F C+PTVKIYN+VLDALL+EN+F MI PIY
Sbjct: 112 SEDLFVIVIDSYHRKGLGEQALKMFYRIKEFGCEPTVKIYNYVLDALLSENRFSMIYPIY 171
Query: 611 NNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKL 790
NN+K+DG+E N+ TYNILLKALCKNN++D A LL EM+ G +PD VSYTTI+SS+CKL
Sbjct: 172 NNIKRDGLEPNLPTYNILLKALCKNNKIDVACKLLNEMASVGYAPDAVSYTTIISSMCKL 231
Query: 791 GRLKEARELIARVNPIVPAYNALINGLC 874
G+++EAREL R V YNALI+G C
Sbjct: 232 GKVEEARELAMRYRSHVSVYNALISGFC 259
Score = 91.3 bits (225), Expect = 5e-16
Identities = 53/193 (27%), Positives = 97/193 (50%), Gaps = 6/193 (3%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+ Y +M+D L + F D L+++M LE + F + I +G E A+K
Sbjct: 424 VAYTSMVDVLCRHCMF-DQAHSLIEKMVLENCPPNTVTFNTFIKGLCSSGRVEWAVKVLD 482
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
++ + C P + YN +LD L+ N+ + I + + G+E N+ +YN +L C
Sbjct: 483 QMGRYGCAPNIITYNELLDGLVKVNRLEQAFGIVREIDEKGIEWNLASYNTILSGFCHAG 542
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARV------NPIVPAY 850
++ A L+ M +G PD ++Y I+ + CK G++K A +L R+ +P + +Y
Sbjct: 543 MLEEALQLIGNMLLRGTKPDAITYNIIIFTYCKRGKVKIAVQLFDRISAGGDWHPDIISY 602
Query: 851 NALINGLCRHLDI 889
+L+ GLC + +
Sbjct: 603 TSLLWGLCNWIGL 615
Score = 80.1 bits (196), Expect = 1e-12
Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 5/167 (2%)
Frame = +2
Query: 395 LLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALL 574
LL +M +EG+ + +I AG E +L ++ C P + ++ ++
Sbjct: 270 LLDEMLVEGLDPDVRTYSMIISCLSSAGNVELSLAVLAKMFVSGCSPNIYTFSSLIKGYF 329
Query: 575 NENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDV 754
+ +N M ++G+E NV YN ++ LC N +V A + +M + GC+P+
Sbjct: 330 VAGRVHEAFDFWNRMIREGLEANVVVYNTVIHGLCLNGKVSEAVSVSCQMEENGCTPNVT 389
Query: 755 SYTTIVSSLCKLGRLKEARELIARV-----NPIVPAYNALINGLCRH 880
SY+++++ K L A E ++ +P V AY ++++ LCRH
Sbjct: 390 SYSSLINGFAKSSDLVGASETWNKMITNGCHPNVVAYTSMVDVLCRH 436
Score = 72.8 bits (177), Expect = 2e-10
Identities = 39/162 (24%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
Frame = +2
Query: 404 QMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNEN 583
QM+ G + + + S+I+ + ++ A +T+ ++ C P V Y ++D L
Sbjct: 378 QMEENGCTPNVTSYSSLINGFAKSSDLVGASETWNKMITNGCHPNVVAYTSMVDVLCRHC 437
Query: 584 KFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYT 763
F + M + N T+N +K LC + RV+ A +L +M + GC+P+ ++Y
Sbjct: 438 MFDQAHSLIEKMVLENCPPNTVTFNTFIKGLCSSGRVEWAVKVLDQMGRYGCAPNIITYN 497
Query: 764 TIVSSLCKLGRLKEARELIARVNP-----IVPAYNALINGLC 874
++ L K+ RL++A ++ ++ + +YN +++G C
Sbjct: 498 ELLDGLVKVNRLEQAFGIVREIDEKGIEWNLASYNTILSGFC 539
Score = 71.2 bits (173), Expect = 5e-10
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
Frame = +2
Query: 404 QMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALLNEN 583
+M EG+ + ++ +VI G +A+ ++ + C P V Y+ +++ +
Sbjct: 343 RMIREGLEANVVVYNTVIHGLCLNGKVSEAVSVSCQMEENGCTPNVTSYSSLINGFAKSS 402
Query: 584 KFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDVSYT 763
+N M +G NV Y ++ LC++ D AH L+ +M + C P+ V++
Sbjct: 403 DLVGASETWNKMITNGCHPNVVAYTSMVDVLCRHCMFDQAHSLIEKMVLENCPPNTVTFN 462
Query: 764 TIVSSLCKLGRLKEARELIARVN-----PIVPAYNALINGLCR 877
T + LC GR++ A +++ ++ P + YN L++GL +
Sbjct: 463 TFIKGLCSSGRVEWAVKVLDQMGRYGCAPNIITYNELLDGLVK 505
Score = 68.2 bits (165), Expect = 4e-09
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 5/165 (3%)
Frame = +2
Query: 395 LLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDFDCKPTVKIYNHVLDALL 574
+L +M + G S + F S+I Y AG +A + R+ + V +YN V+ L
Sbjct: 305 VLAKMFVSGCSPNIYTFSSLIKGYFVAGRVHEAFDFWNRMIREGLEANVVVYNTVIHGLC 364
Query: 575 NENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGAHGLLVEMSKKGCSPDDV 754
K + + M+++G NV +Y+ L+ K++ + GA +M GC P+ V
Sbjct: 365 LNGKVSEAVSVSCQMEENGCTPNVTSYSSLINGFAKSSDLVGASETWNKMITNGCHPNVV 424
Query: 755 SYTTIVSSLCKLGRLKEARELIARV-----NPIVPAYNALINGLC 874
+YT++V LC+ +A LI ++ P +N I GLC
Sbjct: 425 AYTSMVDVLCRHCMFDQAHSLIEKMVLENCPPNTVTFNTFIKGLC 469
Score = 64.3 bits (155), Expect = 6e-08
Identities = 45/186 (24%), Positives = 88/186 (47%), Gaps = 5/186 (2%)
Frame = +2
Query: 332 TYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYR 511
TY ++ L + + +D LL +M G + + ++I S + G E+A + R
Sbjct: 185 TYNILLKALCKNNK-IDVACKLLNEMASVGYAPDAVSYTTIISSMCKLGKVEEARELAMR 243
Query: 512 IRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNR 691
R V +YN ++ E K + + + M +G++ +V TY++++ L
Sbjct: 244 YRSH-----VSVYNALISGFCGEYKLKEAFGLLDEMLVEGLDPDVRTYSMIISCLSSAGN 298
Query: 692 VDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEA-----RELIARVNPIVPAYNA 856
V+ + +L +M GCSP+ ++++++ GR+ EA R + + V YN
Sbjct: 299 VELSLAVLAKMFVSGCSPNIYTFSSLIKGYFVAGRVHEAFDFWNRMIREGLEANVVVYNT 358
Query: 857 LINGLC 874
+I+GLC
Sbjct: 359 VIHGLC 364
>ref|XP_007224442.1| hypothetical protein PRUPE_ppa022250mg [Prunus persica]
gi|462421378|gb|EMJ25641.1| hypothetical protein
PRUPE_ppa022250mg [Prunus persica]
Length = 581
Score = 281 bits (719), Expect = 2e-73
Identities = 136/182 (74%), Positives = 162/182 (89%)
Frame = +2
Query: 344 MIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRIRDF 523
MI KLG + E +DGVQYLL QMKLEG+ CSE++FISVI+SY+RAGLAEQALK FYRIR+F
Sbjct: 1 MIVKLGSQCE-MDGVQYLLNQMKLEGLGCSEELFISVINSYRRAGLAEQALKMFYRIREF 59
Query: 524 DCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRVDGA 703
CKPTVKIYNH+LDALL+EN+FQMI PIY+NMKKDG+E NV+TYNILLKALCKN+R DGA
Sbjct: 60 GCKPTVKIYNHLLDALLSENRFQMINPIYSNMKKDGMEPNVYTYNILLKALCKNDRADGA 119
Query: 704 HGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVNPIVPAYNALINGLCRHL 883
H LLVEMSKKGCSPD VSYTT+VS+LC++G+++EAREL R +PIVP YNA+ING+C+
Sbjct: 120 HKLLVEMSKKGCSPDAVSYTTVVSALCRVGKVEEARELAVRFDPIVPVYNAVINGVCKEC 179
Query: 884 DI 889
I
Sbjct: 180 KI 181
Score = 88.6 bits (218), Expect = 3e-15
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 6/193 (3%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+ Y M+D L + F Q L++ M EG + F + I G + A+K
Sbjct: 341 IAYTCMVDVLCRNFMFHQA-QCLVENMTAEGCPPNTVTFNTFIKGLCGDGKVDWAVKMLD 399
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
++ C P + YN +LD L N+F+ + +++ G+ELN+ TYN +L C+
Sbjct: 400 KMEKHGCFPNITTYNELLDGLFKVNRFEEAFGLVKEIQERGMELNLVTYNTILNGFCQAG 459
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARV------NPIVPAY 850
L +M G PD ++Y I+ + CK GR+ A ++ + P V AY
Sbjct: 460 MTKDGMQLFGKMLVGGTKPDAITYNIIIYAYCKQGRISTATQIFNSIGAAKEWQPDVIAY 519
Query: 851 NALINGLCRHLDI 889
+L++G+C + +
Sbjct: 520 TSLLSGICNSIGL 532
Score = 87.0 bits (214), Expect = 9e-15
Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 5/188 (2%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+ Y ++I L + D V +L +M+ G + + ++ID + +AG A +T+
Sbjct: 271 IAYTSLIHGLCSNGKIGDAVS-VLHEMERNGCPPNATTYSTLIDGFAKAGNLVGASETWN 329
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
+ + C+P V Y ++D L F + NM +G N T+N +K LC +
Sbjct: 330 NMMNHGCRPNVIAYTCMVDVLCRNFMFHQAQCLVENMTAEGCPPNTVTFNTFIKGLCGDG 389
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVNP-----IVPAYN 853
+VD A +L +M K GC P+ +Y ++ L K+ R +EA L+ + + YN
Sbjct: 390 KVDWAVKMLDKMEKHGCFPNITTYNELLDGLFKVNRFEEAFGLVKEIQERGMELNLVTYN 449
Query: 854 ALINGLCR 877
++NG C+
Sbjct: 450 TILNGFCQ 457
Score = 81.6 bits (200), Expect = 4e-13
Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 5/186 (2%)
Frame = +2
Query: 332 TYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYR 511
TY ++ L + DG LL +M +G S + +V+ + R G E+A + R
Sbjct: 102 TYNILLKALCKNDR-ADGAHKLLVEMSKKGCSPDAVSYTTVVSALCRVGKVEEARELAVR 160
Query: 512 IRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNR 691
FD P V +YN V++ + E K + + + M G++ NV TY+ ++ +L
Sbjct: 161 ---FD--PIVPVYNAVINGVCKECKIEEALELLVEMVDKGIDPNVITYSTIINSLSDMRN 215
Query: 692 VDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARV-----NPIVPAYNA 856
V+ A +L +M +GCSP+ ++T+++ GR+ EA L R+ P + AY +
Sbjct: 216 VESALAVLAQMFVRGCSPNIHTFTSLIKGYFLEGRVHEALGLWKRIIREGFVPNIIAYTS 275
Query: 857 LINGLC 874
LI+GLC
Sbjct: 276 LIHGLC 281
Score = 73.9 bits (180), Expect = 8e-11
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 5/187 (2%)
Frame = +2
Query: 329 LTYKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFY 508
+TY T+I+ L + ++ +L QM + G S + F S+I Y G +AL +
Sbjct: 201 ITYSTIINSLSDMRN-VESALAVLAQMFVRGCSPNIHTFTSLIKGYFLEGRVHEALGLWK 259
Query: 509 RIRDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNN 688
RI P + Y ++ L + K + + + M+++G N TY+ L+ K
Sbjct: 260 RIIREGFVPNIIAYTSLIHGLCSNGKIGDAVSVLHEMERNGCPPNATTYSTLIDGFAKAG 319
Query: 689 RVDGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARVN-----PIVPAYN 853
+ GA M GC P+ ++YT +V LC+ +A+ L+ + P +N
Sbjct: 320 NLVGASETWNNMMNHGCRPNVIAYTCMVDVLCRNFMFHQAQCLVENMTAEGCPPNTVTFN 379
Query: 854 ALINGLC 874
I GLC
Sbjct: 380 TFIKGLC 386
Score = 72.4 bits (176), Expect = 2e-10
Identities = 44/187 (23%), Positives = 88/187 (47%), Gaps = 5/187 (2%)
Frame = +2
Query: 335 YKTMIDKLGQEKEFLDGVQYLLQQMKLEGISCSEDIFISVIDSYKRAGLAEQALKTFYRI 514
Y +I+ + +E + + ++ LL +M +GI + + ++I+S E AL ++
Sbjct: 168 YNAVINGVCKECKIEEALE-LLVEMVDKGIDPNVITYSTIINSLSDMRNVESALAVLAQM 226
Query: 515 RDFDCKPTVKIYNHVLDALLNENKFQMIIPIYNNMKKDGVELNVFTYNILLKALCKNNRV 694
C P + + ++ E + + ++ + ++G N+ Y L+ LC N ++
Sbjct: 227 FVRGCSPNIHTFTSLIKGYFLEGRVHEALGLWKRIIREGFVPNIIAYTSLIHGLCSNGKI 286
Query: 695 DGAHGLLVEMSKKGCSPDDVSYTTIVSSLCKLGRLKEARELIARV-----NPIVPAYNAL 859
A +L EM + GC P+ +Y+T++ K G L A E + P V AY +
Sbjct: 287 GDAVSVLHEMERNGCPPNATTYSTLIDGFAKAGNLVGASETWNNMMNHGCRPNVIAYTCM 346
Query: 860 INGLCRH 880
++ LCR+
Sbjct: 347 VDVLCRN 353