BLASTX nr result
ID: Papaver27_contig00039544
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00039544
(675 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004297985.1| PREDICTED: uncharacterized protein LOC101309... 111 2e-22
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga... 107 3e-21
gb|EEC72937.1| hypothetical protein OsI_06799 [Oryza sativa Indi... 104 2e-20
ref|XP_004980332.1| PREDICTED: uncharacterized protein LOC101786... 103 4e-20
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam... 103 7e-20
ref|XP_002445372.1| hypothetical protein SORBIDRAFT_07g013775 [S... 103 7e-20
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677... 103 7e-20
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ... 101 2e-19
gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indi... 101 2e-19
gb|ABA97040.1| retrotransposon protein, putative, unclassified [... 100 4e-19
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 100 4e-19
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 99 9e-19
gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Ja... 98 3e-18
gb|ABB46931.2| retrotransposon protein, putative, unclassified [... 98 3e-18
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta... 98 3e-18
gb|AAO00713.1| retrotransposon protein, putative, unclassified [... 97 4e-18
gb|AAP54692.2| retrotransposon protein, putative, unclassified [... 97 4e-18
ref|XP_006354967.1| PREDICTED: uncharacterized protein LOC102599... 97 5e-18
ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [S... 96 1e-17
ref|XP_002452516.1| hypothetical protein SORBIDRAFT_04g027285 [S... 96 1e-17
>ref|XP_004297985.1| PREDICTED: uncharacterized protein LOC101309247 [Fragaria vesca
subsp. vesca]
Length = 358
Score = 111 bits (277), Expect = 2e-22
Identities = 64/221 (28%), Positives = 107/221 (48%)
Frame = -2
Query: 665 PDILFLSETRCKANRVIPILNSCAFQNLSIEHPVGLSSGMYLEWGDHIKVDIPGKTRRMI 486
P+ILFLSET + V I F P+G++ + L W D + ++I ++ +
Sbjct: 29 PNILFLSETHKTTSYVEKIRRKMRFSQGFCVDPIGIAGDLCLWWDDSLLINIVDFSKNFL 88
Query: 485 HALVTASVNSVDIETLISFVYGNPKQPERIKDWVFFEEMATQVNSPWLLIGDLNLTLNSA 306
++T + +F+YG P Q ++ W + + ++PWL+IGDLN L+
Sbjct: 89 DTMITLVETGEVVRA--TFIYGPPYQEDKEDFWNEWSFRDKEDSTPWLVIGDLNELLSQQ 146
Query: 305 EKLGGVPFSTAPIQNIVSIIESI*LIDLGFIGPIFTWSNKQKDADLIKARLDRALANHDW 126
E++G + + + S I S L+D+GF GP FTW+ K +++ RLDRAL + +W
Sbjct: 147 ERIGDADWDYHRHRFLGSFINSNNLLDVGFSGPAFTWTRKAFGRIILQERLDRALVSAEW 206
Query: 125 XXXXXXXXXXXXPDIGSDHCPIWLCTSPNDQKTNIPYRFFS 3
+GSDHCPI + + ++F S
Sbjct: 207 LVSWPNSSVTHLVRVGSDHCPILFSLGLKENRIGPGFKFES 247
>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1363
Score = 107 bits (267), Expect = 3e-21
Identities = 71/219 (32%), Positives = 100/219 (45%), Gaps = 1/219 (0%)
Frame = -2
Query: 665 PDILFLSETRCKANRVIPILNSCAFQNLSIEHPVGLSSGMYLEW-GDHIKVDIPGKTRRM 489
PD+L L ET+C + R + N I G G++L W D V
Sbjct: 29 PDLLILLETKCSSLRADQATKRLGYVNFRIIPAFGKRGGIWLMWKADIALVHYADYQPNH 88
Query: 488 IHALVTASVNSVDIETLISFVYGNPKQPERIKDWVFFEEMATQVNSPWLLIGDLNLTLNS 309
HAL + S E L++ ++ ER K WV E + +PWL+ GD+N L+
Sbjct: 89 FHALF--KLRSDIPEVLLTGMHAPSVVSERNKYWVDLTEDSPPRGTPWLVAGDMNEVLHG 146
Query: 308 AEKLGGVPFSTAPIQNIVSIIESI*LIDLGFIGPIFTWSNKQKDADLIKARLDRALANHD 129
EK+GG + I + L+DLGF GP FTW+N + LIK RLDRAL N +
Sbjct: 147 NEKMGGRQVGKEQGKQCKDWIAANALLDLGFQGPKFTWTNGRTGGSLIKERLDRALVNSE 206
Query: 128 WXXXXXXXXXXXXPDIGSDHCPIWLCTSPNDQKTNIPYR 12
W P SDHCP+ + + N + + P+R
Sbjct: 207 WLDLFPDTKVIHLPRTFSDHCPLLILFNENPRSESFPFR 245
>gb|EEC72937.1| hypothetical protein OsI_06799 [Oryza sativa Indica Group]
Length = 1035
Score = 104 bits (260), Expect = 2e-20
Identities = 67/212 (31%), Positives = 98/212 (46%)
Frame = -2
Query: 659 ILFLSETRCKANRVIPILNSCAFQNLSIEHPVGLSSGMYLEWGDHIKVDIPGKTRRMIHA 480
I+FLSETR K +V + N + + + G+S G+ L W + + V+I R I A
Sbjct: 586 IVFLSETRQKIEKVRRLRNRLGLKGFAGVNSDGMSGGLALFWHESVHVEIISMNERYIDA 645
Query: 479 LVTASVNSVDIETLISFVYGNPKQPERIKDWVFFEEMATQVNSPWLLIGDLNLTLNSAEK 300
V SVN+ +FVYG P+ R + W + + PWL++GD N TL E
Sbjct: 646 YVRLSVNAPVWHA--TFVYGEPRVENRHRMWALLNSVKQVSDPPWLVVGDFNETLWQFEH 703
Query: 299 LGGVPFSTAPIQNIVSIIESI*LIDLGFIGPIFTWSNKQKDADLIKARLDRALANHDWXX 120
S +Q +++ L DLGF G +T+ N+++ +K RLD ALA+ W
Sbjct: 704 FSLKQRSELQMQAFRDVVQRCDLHDLGFSGVPYTYDNRREGRSNVKVRLDYALADDGWRG 763
Query: 119 XXXXXXXXXXPDIGSDHCPIWLCTSPNDQKTN 24
SDHCPI + S D N
Sbjct: 764 LFSTAQVFHLSSPRSDHCPILVKFSSEDLHRN 795
>ref|XP_004980332.1| PREDICTED: uncharacterized protein LOC101786154 [Setaria italica]
Length = 720
Score = 103 bits (258), Expect = 4e-20
Identities = 65/208 (31%), Positives = 95/208 (45%), Gaps = 2/208 (0%)
Frame = -2
Query: 665 PDILFLSETRCKANRVIPILNSCAFQNLSIEHPVGLSSGMYLEWGDHIKVDIPGKTRRMI 486
PDILFLSET+ +R+ + N+ ++ VG S G+ L W + V + R +
Sbjct: 29 PDILFLSETKLDEHRIKGLRWKLGLTNVVVKDCVGRSGGLALFWRTGVDVHV----RWIS 84
Query: 485 HALVTASVNSVD-IETLISFVYGNPKQPERIKDWVFFEEMATQVNSPWLLIGDLNLTLNS 309
+ A V D ++ YG P+ + W + PWL +GD N L
Sbjct: 85 RLYIDADVQEADSFSWRLTGFYGEPRTENKHLSWKALRTLNAARRKPWLCLGDFNEILMG 144
Query: 308 AEKLGGVPFSTAPIQNIVSIIESI*LIDLGFIGPIFT-WSNKQKDADLIKARLDRALANH 132
AEK GG+P A + S +E L DLGF G +FT W+N + ++ RLDRA+AN
Sbjct: 145 AEKEGGLPRGQACMDRFRSALEDCELSDLGFAGDLFTWWNNSHNSNEYVRERLDRAVANE 204
Query: 131 DWXXXXXXXXXXXXPDIGSDHCPIWLCT 48
+W SDH P+ + T
Sbjct: 205 EWRAHFPLYKVINGEPRHSDHRPVVVLT 232
>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
42.57) [Arabidopsis thaliana]
Length = 1662
Score = 103 bits (256), Expect = 7e-20
Identities = 66/218 (30%), Positives = 106/218 (48%)
Frame = -2
Query: 662 DILFLSETRCKANRVIPILNSCAFQNLSIEHPVGLSSGMYLEWGDHIKVDIPGKTRRMIH 483
D+LFL ET K + + + F N+ + P G S G+ L W D +++ + R H
Sbjct: 411 DVLFLIETLNKCEVISNLASVLGFPNVITQPPQGHSGGLALLWKDSVRLSNLYQDDR--H 468
Query: 482 ALVTASVNSVDIETLISFVYGNPKQPERIKDWVFFEEMATQVNSPWLLIGDLNLTLNSAE 303
V S+N+++ +S VYG+P Q ER W FE ++ N PW+LIGD N L++ E
Sbjct: 469 IDVHISINNINF--YLSRVYGHPCQSERHSLWTHFENLSKTRNDPWILIGDFNEILSNNE 526
Query: 302 KLGGVPFSTAPIQNIVSIIESI*LIDLGFIGPIFTWSNKQKDADLIKARLDRALANHDWX 123
K+GG + +++ + L D+ IG F+W ++ + +K LDRA N +
Sbjct: 527 KIGGPQRDEWTFRGFRNMVSTCDLKDIRSIGDRFSWVG-ERHSHTVKCCLDRAFINSEGA 585
Query: 122 XXXXXXXXXXXPDIGSDHCPIWLCTSPNDQKTNIPYRF 9
GSDH P++L + + P+RF
Sbjct: 586 FLFPFAELEFLEFTGSDHKPLFLSLEKTETRKMRPFRF 623
>ref|XP_002445372.1| hypothetical protein SORBIDRAFT_07g013775 [Sorghum bicolor]
gi|241941722|gb|EES14867.1| hypothetical protein
SORBIDRAFT_07g013775 [Sorghum bicolor]
Length = 589
Score = 103 bits (256), Expect = 7e-20
Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 7/229 (3%)
Frame = -2
Query: 674 SNTPDILFLSETRCKANRVIPILNSCAFQNLSIEHPVGLSSGMYLEWGDHIKVDIPGKTR 495
S +PD++ LSET+ R+ + F+N+ + VG G+ + W + V + K++
Sbjct: 272 SVSPDMMLLSETKSDEKRMRVLRMKLGFENMEVVDCVGKGGGLAVLWRRGVDVVLRSKSK 331
Query: 494 RMIHALVTASVNSVDIETLISFVYGNPKQPERIKDWVFFEEMATQV--NSPWLLIGDLNL 321
I V+ + + + +YG P++ + K W +++A Q N WL GD N
Sbjct: 332 NHIDMEVSETRGN---PWRFTGIYGEPQEAMKWKTWQLLQDLAAQHQNNQAWLCAGDFNE 388
Query: 320 TLNSAEKLGGVPFSTAPIQNIVSIIESI*LIDLGFIGPIFTWSNKQ-KDADLIKARLDRA 144
L EK GGVP + +E L DLGF G +FTW NKQ K I+ RLDRA
Sbjct: 389 VLYQHEKEGGVPRPQNSMDRFKQALEVSELHDLGFEGNVFTWRNKQSKGESHIRERLDRA 448
Query: 143 LANHDWXXXXXXXXXXXXPDIGSDHCPIWLCTSPN----DQKTNIPYRF 9
+AN +W SDH + +CT + K P++F
Sbjct: 449 VANFEWLAKFPLVRVKNGDTYHSDHRALVVCTEDDLVGRKPKAQGPFKF 497
>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
putative protein [Arabidopsis thaliana]
Length = 1294
Score = 103 bits (256), Expect = 7e-20
Identities = 66/218 (30%), Positives = 106/218 (48%)
Frame = -2
Query: 662 DILFLSETRCKANRVIPILNSCAFQNLSIEHPVGLSSGMYLEWGDHIKVDIPGKTRRMIH 483
D+LFL ET K + + + F N+ + P G S G+ L W D +++ + R H
Sbjct: 391 DVLFLIETLNKCEVISNLASVLGFPNVITQPPQGHSGGLALLWKDSVRLSNLYQDDR--H 448
Query: 482 ALVTASVNSVDIETLISFVYGNPKQPERIKDWVFFEEMATQVNSPWLLIGDLNLTLNSAE 303
V S+N+++ +S VYG+P Q ER W FE ++ N PW+LIGD N L++ E
Sbjct: 449 IDVHISINNINF--YLSRVYGHPCQSERHSLWTHFENLSKTRNDPWILIGDFNEILSNNE 506
Query: 302 KLGGVPFSTAPIQNIVSIIESI*LIDLGFIGPIFTWSNKQKDADLIKARLDRALANHDWX 123
K+GG + +++ + L D+ IG F+W ++ + +K LDRA N +
Sbjct: 507 KIGGPQRDEWTFRGFRNMVSTCDLKDIRSIGDRFSWVG-ERHSHTVKCCLDRAFINSEGA 565
Query: 122 XXXXXXXXXXXPDIGSDHCPIWLCTSPNDQKTNIPYRF 9
GSDH P++L + + P+RF
Sbjct: 566 FLFPFAELEFLEFTGSDHKPLFLSLEKTETRKMRPFRF 603
>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
Japonica Group]
Length = 1382
Score = 101 bits (252), Expect = 2e-19
Identities = 70/202 (34%), Positives = 90/202 (44%)
Frame = -2
Query: 665 PDILFLSETRCKANRVIPILNSCAFQNLSIEHPVGLSSGMYLEWGDHIKVDIPGKTRRMI 486
P ++FLSET+ + + ++ S F GLS G+ L W V + G I
Sbjct: 34 PSLVFLSETKMRDKQARNLMWSLGFSGSFAVSCEGLSGGLALFWTTAYTVSLRGFNSHFI 93
Query: 485 HALVTASVNSVDIETLISFVYGNPKQPERIKDWVFFEEMATQVNSPWLLIGDLNLTLNSA 306
LV+ ISFVYG PK+ R W + Q PWL GD N L
Sbjct: 94 DVLVSTEELP---PWRISFVYGEPKRELRHFFWNLLRRLHDQWRGPWLCCGDFNEVLCLD 150
Query: 305 EKLGGVPFSTAPIQNIVSIIESI*LIDLGFIGPIFTWSNKQKDADLIKARLDRALANHDW 126
E LG S +Q+ S ++ LIDLGF+GP FTWSNKQ K RLDRA+AN ++
Sbjct: 151 EHLGMRERSEPHMQHFRSCLDDCGLIDLGFVGPKFTWSNKQDANSNSKVRLDRAVANGEF 210
Query: 125 XXXXXXXXXXXXPDIGSDHCPI 60
SDH I
Sbjct: 211 SRYFEDCLVENVITTSSDHYAI 232
>gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indica Group]
Length = 1784
Score = 101 bits (252), Expect = 2e-19
Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 2/209 (0%)
Frame = -2
Query: 659 ILFLSETRCKANRVIPILNSCAFQNLSIEHPVGLSSGMYLEWGDHIKVDIPGKTRRMIHA 480
++FL ETR R+ + + + E+ G+S G+ L W + + V+I G R I A
Sbjct: 31 LVFLCETRQSVERMRRLRSRLGLRGFVGENCNGMSGGLALFWDESVFVEIKGINERYIDA 90
Query: 479 LVTASVNSVDIETLISFVYGNPKQPERIKDWVFFEEMATQVNSPWLLIGDLNLTLNSAEK 300
V SVN D ++FVYG P+ R + W + N PWL++GD N TL E
Sbjct: 91 YVRLSVN--DPIWHVTFVYGEPRVEHRHRMWSMLNSIKQSSNLPWLVLGDFNETLWQFEH 148
Query: 299 LGGVPFSTAPIQNIVSIIESI*LIDLGFIGPIFTWSNKQKDADLIKARLDRALANHDWXX 120
S +Q ++++ L DLGF G +T+ NK++ + ++ RLDR +A+ W
Sbjct: 149 FSKKKRSEVQMQAFRDVLQTYELHDLGFKGLPYTYDNKREGINNVRVRLDRVVADDGWRD 208
Query: 119 XXXXXXXXXXPDIGSDHCPIWL--CTSPN 39
S+HCP+ L C N
Sbjct: 209 MFRSSQVEHLISPCSNHCPVVLKFCVDTN 237
>gb|ABA97040.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1913
Score = 100 bits (249), Expect = 4e-19
Identities = 62/212 (29%), Positives = 102/212 (48%)
Frame = -2
Query: 659 ILFLSETRCKANRVIPILNSCAFQNLSIEHPVGLSSGMYLEWGDHIKVDIPGKTRRMIHA 480
++FLSETR K R+ + + + + GLS G+ L W + I +D+ R + A
Sbjct: 632 VVFLSETRQKIERIRRLRSRLGLKGFVGCNSDGLSGGLALFWHESIFMDVKSVNERYVDA 691
Query: 479 LVTASVNSVDIETLISFVYGNPKQPERIKDWVFFEEMATQVNSPWLLIGDLNLTLNSAEK 300
+ S D ++FVYG P+ R + W ++ PW++IGD N TL E
Sbjct: 692 YMRLSPE--DPLCHVTFVYGEPRVENRHRLWSRLLDLKQSSPLPWMIIGDFNETLWQFEH 749
Query: 299 LGGVPFSTAPIQNIVSIIESI*LIDLGFIGPIFTWSNKQKDADLIKARLDRALANHDWXX 120
A ++ +++ L+DLGF G +T+ N+++ +K RLDRALA++ W
Sbjct: 750 FSVSKRGEAQMRAFRDVLQICELVDLGFSGVPYTYDNRREGRSNVKVRLDRALADNSWRD 809
Query: 119 XXXXXXXXXXPDIGSDHCPIWLCTSPNDQKTN 24
SDHCPI L + + +++N
Sbjct: 810 IYSNSQVVHLTSSCSDHCPILLKFAADSRQSN 841
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 100 bits (249), Expect = 4e-19
Identities = 57/202 (28%), Positives = 98/202 (48%)
Frame = -2
Query: 665 PDILFLSETRCKANRVIPILNSCAFQNLSIEHPVGLSSGMYLEWGDHIKVDIPGKTRRMI 486
P+++FL ET+ + N + ++ F +L P+G S G+ L W D +++ + +R+I
Sbjct: 29 PEVIFLCETKKRRNYLENVVGHLGFFDLHTVEPIGKSGGLALMWKDSVQIKVLQSDKRLI 88
Query: 485 HALVTASVNSVDIETLISFVYGNPKQPERIKDWVFFEEMATQVNSPWLLIGDLNLTLNSA 306
AL+ D E ++ +YG P Q ER + W + + PW+L GD N ++ +
Sbjct: 89 DALLIWQ----DKEFYLTCIYGEPVQAERGELWERLTRLGLSRSGPWMLTGDFNELVDPS 144
Query: 305 EKLGGVPFSTAPIQNIVSIIESI*LIDLGFIGPIFTWSNKQKDADLIKARLDRALANHDW 126
EK+GG + ++ S L ++ G F+W + D +L++ RLDR +AN W
Sbjct: 145 EKIGGPARKESSCLEFRQMLNSCGLWEVNHSGYQFSWYGNRND-ELVQCRLDRTVANQAW 203
Query: 125 XXXXXXXXXXXXPDIGSDHCPI 60
I SDH P+
Sbjct: 204 MELFPQAKATYLQKICSDHSPL 225
>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1656
Score = 99.4 bits (246), Expect = 9e-19
Identities = 69/221 (31%), Positives = 101/221 (45%)
Frame = -2
Query: 671 NTPDILFLSETRCKANRVIPILNSCAFQNLSIEHPVGLSSGMYLEWGDHIKVDIPGKTRR 492
+ P+ILFL ETR + + + F + + P+ G+ L WGD ++V I +
Sbjct: 631 HNPEILFLMETRQQEGIIKEWKRNLKFTDHHVVDPIATGRGLALFWGDAVQVSILDSSPN 690
Query: 491 MIHALVTASVNSVDIETLISFVYGNPKQPERIKDWVFFEEMATQVNSPWLLIGDLNLTLN 312
+ +V S S I+++YGNP E+ W + PWL++GD N L+
Sbjct: 691 YVDTVV--SFLSDAFVCKITWMYGNPHDNEKRAFWRLMYSRFPVQSLPWLVLGDFNEVLD 748
Query: 311 SAEKLGGVPFSTAPIQNIVSIIESI*LIDLGFIGPIFTWSNKQKDADLIKARLDRALANH 132
+EK GG P I+ + + L DL F GP F+W + IK RLDRAL N
Sbjct: 749 PSEKWGGGPPLPWRIKLFRDFLNNGHLRDLHFKGPGFSWFAMRHGRVFIKERLDRALGNI 808
Query: 131 DWXXXXXXXXXXXXPDIGSDHCPIWLCTSPNDQKTNIPYRF 9
W P IGSDH P+ L ++P +RF
Sbjct: 809 AWSSSQPNTQILHLPKIGSDHRPLLLDSNPKMLNKTRLFRF 849
>gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Japonica Group]
Length = 1888
Score = 97.8 bits (242), Expect = 3e-18
Identities = 60/178 (33%), Positives = 89/178 (50%)
Frame = -2
Query: 659 ILFLSETRCKANRVIPILNSCAFQNLSIEHPVGLSSGMYLEWGDHIKVDIPGKTRRMIHA 480
I+FLSETR K +V + N + + + G+S G+ L W + I V+I R I A
Sbjct: 686 IVFLSETRQKIEKVRRLRNRLGLRGFAGVNSDGMSGGLALFWHESIHVEIISMNERYIDA 745
Query: 479 LVTASVNSVDIETLISFVYGNPKQPERIKDWVFFEEMATQVNSPWLLIGDLNLTLNSAEK 300
V SVN+ +FVYG P+ R + W + + PWL++GD N TL E
Sbjct: 746 YVRLSVNAPVWHA--TFVYGEPRVENRHRMWALLNSIKQVSDLPWLVVGDFNETLWQFEH 803
Query: 299 LGGVPFSTAPIQNIVSIIESI*LIDLGFIGPIFTWSNKQKDADLIKARLDRALANHDW 126
S +Q +++ L DLGF G +T+ N+++ +K RLDRALA+ W
Sbjct: 804 FSLKQRSELQMQAFRDVVQRCDLHDLGFSGVPYTYDNRREGRSNVKVRLDRALADDGW 861
>gb|ABB46931.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1853
Score = 97.8 bits (242), Expect = 3e-18
Identities = 60/178 (33%), Positives = 89/178 (50%)
Frame = -2
Query: 659 ILFLSETRCKANRVIPILNSCAFQNLSIEHPVGLSSGMYLEWGDHIKVDIPGKTRRMIHA 480
I+FLSETR K +V + N + + + G+S G+ L W + I V+I R I A
Sbjct: 686 IVFLSETRQKIEKVRRLRNRLGLRGFAGVNSDGMSGGLALFWHESIHVEIISMNERYIDA 745
Query: 479 LVTASVNSVDIETLISFVYGNPKQPERIKDWVFFEEMATQVNSPWLLIGDLNLTLNSAEK 300
V SVN+ +FVYG P+ R + W + + PWL++GD N TL E
Sbjct: 746 YVRLSVNAPVWHA--TFVYGEPRVENRHRMWALLNSIKQVSDLPWLVVGDFNETLWQFEH 803
Query: 299 LGGVPFSTAPIQNIVSIIESI*LIDLGFIGPIFTWSNKQKDADLIKARLDRALANHDW 126
S +Q +++ L DLGF G +T+ N+++ +K RLDRALA+ W
Sbjct: 804 FSLKQRSELQMQAFRDVVQRCDLHDLGFSGVPYTYDNRREGRSNVKVRLDRALADDGW 861
>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1750
Score = 97.8 bits (242), Expect = 3e-18
Identities = 62/218 (28%), Positives = 105/218 (48%)
Frame = -2
Query: 662 DILFLSETRCKANRVIPILNSCAFQNLSIEHPVGLSSGMYLEWGDHIKVDIPGKTRRMIH 483
DILFL ET + ++V + F N+ + P G S G+ L W +++ + + + R+I
Sbjct: 411 DILFLVETLNQCDKVCKLAYDLGFPNVITQPPNGRSGGLALMWKNNVSLSLISQDERLID 470
Query: 482 ALVTASVNSVDIETLISFVYGNPKQPERIKDWVFFEEMATQVNSPWLLIGDLNLTLNSAE 303
+ VT + S +S VYG+P Q ER + W E ++ N+ WLL+GD N L++AE
Sbjct: 471 SHVTFNNKSF----YLSCVYGHPTQSERHQLWQTLEHISDNRNAEWLLVGDFNEILSNAE 526
Query: 302 KLGGVPFSTAPIQNIVSIIESI*LIDLGFIGPIFTWSNKQKDADLIKARLDRALANHDWX 123
K+GG +N +++ + D+ G F+W ++ +K LDR N W
Sbjct: 527 KIGGPMREEWTFRNFRNMVSHCDIEDMRSKGDRFSWVG-ERHTHTVKCCLDRVFINSAWT 585
Query: 122 XXXXXXXXXXXPDIGSDHCPIWLCTSPNDQKTNIPYRF 9
GSDH P+ + + + + + +RF
Sbjct: 586 ATFPYAEIEFLDFTGSDHKPVLVHFNESFPRRSKLFRF 623
>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1557
Score = 97.4 bits (241), Expect = 4e-18
Identities = 63/201 (31%), Positives = 93/201 (46%)
Frame = -2
Query: 656 LFLSETRCKANRVIPILNSCAFQNLSIEHPVGLSSGMYLEWGDHIKVDIPGKTRRMIHAL 477
+FL ETR +++ + N + + G+S G+ L W + + V+I K R I A
Sbjct: 465 VFLCETRQPVDKIKRLRNRLGLRGFAGVSSDGMSGGLALFWHESVHVEILNKNERFIDAY 524
Query: 476 VTASVNSVDIETLISFVYGNPKQPERIKDWVFFEEMATQVNSPWLLIGDLNLTLNSAEKL 297
+ S N D +FVYG P+ R K W + N WL+IGD N L E
Sbjct: 525 IRLSPN--DPLWHATFVYGEPRVENRHKMWSLLNSIKQSSNLSWLVIGDFNEALWQFEHF 582
Query: 296 GGVPFSTAPIQNIVSIIESI*LIDLGFIGPIFTWSNKQKDADLIKARLDRALANHDWXXX 117
P S A +Q ++++ L DLG G T+ N++ + +K RLDRALA+ +W
Sbjct: 583 SRKPRSDAQMQAFRDVLDTCELHDLGISGLPHTYDNRRGGWNNVKVRLDRALADDEWRDL 642
Query: 116 XXXXXXXXXPDIGSDHCPIWL 54
S+HCPI L
Sbjct: 643 FSQYQVQHLVSPCSNHCPIVL 663
>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1585
Score = 97.4 bits (241), Expect = 4e-18
Identities = 63/201 (31%), Positives = 93/201 (46%)
Frame = -2
Query: 656 LFLSETRCKANRVIPILNSCAFQNLSIEHPVGLSSGMYLEWGDHIKVDIPGKTRRMIHAL 477
+FL ETR +++ + N + + G+S G+ L W + + V+I K R I A
Sbjct: 493 VFLCETRQPVDKIKRLRNRLGLRGFAGVSSDGMSGGLALFWHESVHVEILNKNERFIDAY 552
Query: 476 VTASVNSVDIETLISFVYGNPKQPERIKDWVFFEEMATQVNSPWLLIGDLNLTLNSAEKL 297
+ S N D +FVYG P+ R K W + N WL+IGD N L E
Sbjct: 553 IRLSPN--DPLWHATFVYGEPRVENRHKMWSLLNSIKQSSNLSWLVIGDFNEALWQFEHF 610
Query: 296 GGVPFSTAPIQNIVSIIESI*LIDLGFIGPIFTWSNKQKDADLIKARLDRALANHDWXXX 117
P S A +Q ++++ L DLG G T+ N++ + +K RLDRALA+ +W
Sbjct: 611 SRKPRSDAQMQAFRDVLDTCELHDLGISGLPHTYDNRRGGWNNVKVRLDRALADDEWRDL 670
Query: 116 XXXXXXXXXPDIGSDHCPIWL 54
S+HCPI L
Sbjct: 671 FSQYQVQHLVSPCSNHCPIVL 691
>ref|XP_006354967.1| PREDICTED: uncharacterized protein LOC102599840 [Solanum tuberosum]
Length = 288
Score = 97.1 bits (240), Expect = 5e-18
Identities = 68/209 (32%), Positives = 101/209 (48%), Gaps = 2/209 (0%)
Frame = -2
Query: 674 SNTPDILFLSETRCKANRVIPILNSCAFQNLSIEHPVGLSSGMYLEW-GDHIKVDIPGKT 498
S+ P IL L+ETR + + IL + + ++ G S G+ L W I V+ T
Sbjct: 56 SHNPTILALTETRMED--LDKILQALDYTDVIQVPAFGYSGGIALLWRNSEINVEPFVIT 113
Query: 497 RRMIHALVTASVNSVDIETLISFVYGNPKQPERIKDWVFFEEMATQVNSPWLLIGDLNLT 318
+ IH VT V+S + S +Y R W + + ++ PWL+ GD N
Sbjct: 114 EQEIH--VTIKVSSSFPKFFFSVIYAKNTYGLRKILWENLKNLTARIKGPWLVCGDFNEV 171
Query: 317 LNSAEKLGGVPFSTAPIQNIVSIIESI*LIDLGFIGPIFTWSNKQKDAD-LIKARLDRAL 141
N++EKLGG P + +S ++ + +IDLGF G +TWSNK K+ + LI R+DR L
Sbjct: 172 TNASEKLGGRPINNTKCAKFISCLDDMDMIDLGFTGQKYTWSNKHKNNNTLIMERIDRFL 231
Query: 140 ANHDWXXXXXXXXXXXXPDIGSDHCPIWL 54
+NH W P SDH +L
Sbjct: 232 SNHSWLNLFPDSHVHHLPRTHSDHVLFFL 260
>ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor]
gi|241936261|gb|EES09406.1| hypothetical protein
SORBIDRAFT_05g005061 [Sorghum bicolor]
Length = 753
Score = 95.9 bits (237), Expect = 1e-17
Identities = 55/211 (26%), Positives = 99/211 (46%)
Frame = -2
Query: 665 PDILFLSETRCKANRVIPILNSCAFQNLSIEHPVGLSSGMYLEWGDHIKVDIPGKTRRMI 486
P ++F+ ET+ RV + + +F N + G S G+ L W + + + I + I
Sbjct: 29 PSVMFIMETQISKYRVENLRYTLSFDNSFAVNSSGRSGGLGLFWNNDVLLSIQKYSNYHI 88
Query: 485 HALVTASVNSVDIETLISFVYGNPKQPERIKDWVFFEEMATQVNSPWLLIGDLNLTLNSA 306
+++ +SF+YG P + R + W ++M + + PW+ +GD N L
Sbjct: 89 DTIISEHGKE---PRRMSFIYGEPNRSFRYRTWDIMKQMRSDTDLPWVCMGDFNEILRRE 145
Query: 305 EKLGGVPFSTAPIQNIVSIIESI*LIDLGFIGPIFTWSNKQKDADLIKARLDRALANHDW 126
E+LG ++ + ++ L D+G+IG +T+ K ++ RLDRALA+ +W
Sbjct: 146 EQLGPNEREEYLMEGVRDAVDMCQLRDIGYIGLDWTFEKKVAGGHFVRVRLDRALASVNW 205
Query: 125 XXXXXXXXXXXXPDIGSDHCPIWLCTSPNDQ 33
+ SDHCPI L P+++
Sbjct: 206 CARFPLAAVQHLTAVKSDHCPILLSHVPDER 236
>ref|XP_002452516.1| hypothetical protein SORBIDRAFT_04g027285 [Sorghum bicolor]
gi|241932347|gb|EES05492.1| hypothetical protein
SORBIDRAFT_04g027285 [Sorghum bicolor]
Length = 689
Score = 95.9 bits (237), Expect = 1e-17
Identities = 56/211 (26%), Positives = 98/211 (46%)
Frame = -2
Query: 665 PDILFLSETRCKANRVIPILNSCAFQNLSIEHPVGLSSGMYLEWGDHIKVDIPGKTRRMI 486
P ++F+ ET+ RV + + +F N + G S G+ L W + + + I + I
Sbjct: 362 PSVMFIMETQISKYRVENLRYTLSFDNSFAVNSSGRSGGLGLFWNNDVLLSIQKYSNYHI 421
Query: 485 HALVTASVNSVDIETLISFVYGNPKQPERIKDWVFFEEMATQVNSPWLLIGDLNLTLNSA 306
+++ +SF+YG P + R + W ++M + + PW+ +GD N L
Sbjct: 422 DTIISEHGKE---PWRMSFIYGEPNRSLRFRTWDIMKQMRSDTDLPWVCMGDFNEILRRE 478
Query: 305 EKLGGVPFSTAPIQNIVSIIESI*LIDLGFIGPIFTWSNKQKDADLIKARLDRALANHDW 126
E+LG ++ ++ L D+G+IG +T+ K ++ RLDRALA+ +W
Sbjct: 479 EQLGPNEREEYLMEGFRDAVDVCQLRDIGYIGLGWTFEKKVAGGHYVRVRLDRALASVNW 538
Query: 125 XXXXXXXXXXXXPDIGSDHCPIWLCTSPNDQ 33
+ SDHCPI L PN++
Sbjct: 539 CARFPLAAGQHLTTVKSDHCPILLSHVPNER 569