BLASTX nr result

ID: Papaver27_contig00039239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00039239
         (501 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516807.1| ubiquitin-protein ligase, putative [Ricinus ...    56   5e-06
ref|XP_004229229.1| PREDICTED: F-box protein CPR30-like [Solanum...    55   8e-06

>ref|XP_002516807.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223543895|gb|EEF45421.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 358

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 42/125 (33%), Positives = 57/125 (45%), Gaps = 9/125 (7%)
 Frame = -1

Query: 375 AVLMNYPFESNKMYHHQFLGSCNGLICFKFRVIDWGADYQRRREEETKYSVLNPLTRQFK 196
           A+ + YP +S+     +F+GSCNGL+C                 E     +LNP TR  +
Sbjct: 84  AIKLGYPLKSDCYDEVKFIGSCNGLLCV--------------ASEPGVLLLLNPSTRAAQ 129

Query: 195 EFIMQIVDRIGN---------GITYGFGYDSKIDDYKLVAILNNGDSSNIEVYKVRSNSQ 43
           E     + R+GN            YGFGY   I+DYKLV I   G    + VY V+ NS 
Sbjct: 130 E-----IPRLGNRRPFTQSSLPYMYGFGYAHSINDYKLVKISCRG---CVFVYSVKENSW 181

Query: 42  TSIRG 28
            S+ G
Sbjct: 182 RSVGG 186


>ref|XP_004229229.1| PREDICTED: F-box protein CPR30-like [Solanum lycopersicum]
          Length = 371

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 11/109 (10%)
 Frame = -1

Query: 321 LGSCNGLICFKFRVIDWGADYQRRREEETKYSVLNPLTRQFKEFIMQIVD-RIGNG---I 154
           LGSCNGLIC                 +     +LNP T +F  F   +++  +G+G   I
Sbjct: 108 LGSCNGLICLT--------------SDSFNLMLLNPCTGKFSLFPDLMIEYEVGDGGVHI 153

Query: 153 TYGFGYDSKIDDYKLVAIL------NNGDSSN-IEVYKVRSNSQTSIRG 28
            YGFGYD+  DDYK+V +       N G   N + VY ++ +S +SI+G
Sbjct: 154 RYGFGYDASTDDYKVVKMFSFPRIDNEGRHVNMVSVYSLKGSSWSSIQG 202


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