BLASTX nr result
ID: Papaver27_contig00039090
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00039090
(1383 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 75 9e-21
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 75 9e-21
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 107 2e-20
gb|AAD12028.1| putative non-LTR retroelement reverse transcripta... 72 2e-20
gb|ABW81094.1| RT6non-ltr [Cleome spinosa] 78 3e-20
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA... 70 6e-20
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 104 1e-19
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 103 1e-19
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal... 100 1e-18
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 77 1e-18
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 77 1e-18
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 100 2e-18
ref|XP_004149382.1| PREDICTED: putative ribonuclease H protein A... 61 2e-18
dbj|BAB08692.1| non-LTR retroelement reverse transcriptase-like ... 100 3e-18
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 100 3e-18
gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub... 100 3e-18
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 99 4e-18
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678... 99 4e-18
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 77 5e-18
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali... 99 6e-18
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 75.5 bits (184), Expect(2) = 9e-21
Identities = 41/130 (31%), Positives = 58/130 (44%), Gaps = 4/130 (3%)
Frame = +2
Query: 932 KPETSPLQFLWACIELTYKQSAVRWSIVCLPYEEGDLGI*CIEIANTVSNLRHIWDIISN 1111
K E+ +FLWA K S V W CLP EG LG N LR IW +
Sbjct: 691 KIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDR 750
Query: 1112 KETIWVTWVKNSLIKHKDFWLLDC----SWCWRRILDHRDMASQFFLQLIGNGEDTKLWK 1279
++W W ++ + H FW ++ W W+ +L+ R +A +F +GNG W
Sbjct: 751 DTSLWAQWQRHHRLGHASFWQVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNGGTVSFWF 810
Query: 1280 DKWLPQGNLL 1309
D W G L+
Sbjct: 811 DCWTSLGPLI 820
Score = 53.1 bits (126), Expect(2) = 9e-21
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +1
Query: 811 GFEVGTLPIRYLGLPLLSTRLSHSDCIPLFDHIITRIKSWKARDLSFA 954
GF GT PIRYLGLPL+ +L +D PL + + R++SW ++ LSFA
Sbjct: 614 GFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFA 661
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 75.5 bits (184), Expect(2) = 9e-21
Identities = 41/130 (31%), Positives = 58/130 (44%), Gaps = 4/130 (3%)
Frame = +2
Query: 932 KPETSPLQFLWACIELTYKQSAVRWSIVCLPYEEGDLGI*CIEIANTVSNLRHIWDIISN 1111
K E+ +FLWA K S V W CLP EG LG N LR IW +
Sbjct: 691 KIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDR 750
Query: 1112 KETIWVTWVKNSLIKHKDFWLLDC----SWCWRRILDHRDMASQFFLQLIGNGEDTKLWK 1279
++W W ++ + H FW ++ W W+ +L+ R +A +F +GNG W
Sbjct: 751 DTSLWAQWQRHHRLGHASFWQVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNGGTVSFWF 810
Query: 1280 DKWLPQGNLL 1309
D W G L+
Sbjct: 811 DCWTSLGPLI 820
Score = 53.1 bits (126), Expect(2) = 9e-21
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +1
Query: 811 GFEVGTLPIRYLGLPLLSTRLSHSDCIPLFDHIITRIKSWKARDLSFA 954
GF GT PIRYLGLPL+ +L +D PL + + R++SW ++ LSFA
Sbjct: 614 GFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFA 661
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 107 bits (266), Expect = 2e-20
Identities = 56/176 (31%), Positives = 99/176 (56%), Gaps = 7/176 (3%)
Frame = +2
Query: 809 WASKLALYLSGILASHFSLLASLTQTASPFLITS--LLE*SLGKPETSPLQFLWACIELT 982
W+S+ + A F+L++S+ ++ F +++ L + + E FLW+ L
Sbjct: 353 WSSRFLSF-----AGRFNLISSIIWSSCNFWLSAFQLPRACIQEIEKLCSSFLWSGTNLN 407
Query: 983 YKQSAVRWSIVCLPYEEGDLGI*CIEIANTVSNLRHIWDIISNKETIWVTWVKNSLIKHK 1162
K++ + W+ VC P EG LG+ ++ AN V L+ +W IIS+ +++WV WV+++L+K +
Sbjct: 408 SKKAKISWNQVCKPKSEGGLGLRSLKEANDVCCLKLVWRIISHGDSLWVKWVEHNLLKRE 467
Query: 1163 DFWLLD-----CSWCWRRILDHRDMASQFFLQLIGNGEDTKLWKDKWLPQGNLLSL 1315
FW++ SW W++IL +R +A +F +GNGE T W D W G L+ +
Sbjct: 468 IFWIVKENANLGSWIWKKILKYRGVAKRFCKAEVGNGESTSFWFDDWSLLGRLIDV 523
Score = 62.4 bits (150), Expect = 5e-07
Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Frame = +1
Query: 748 ERATFISSVNASTALS-IRSVLGFEVGTLPIRYLGLPLLSTRLSHSDCIPLFDHIITRIK 924
E++T S+ +ST+ + + + FEVG LPIRYLGLPL++ RLS D PL + I RI
Sbjct: 292 EKSTIFSAGLSSTSRAQLHTHFPFEVGELPIRYLGLPLVTKRLSSVDYAPLIEQIRKRIG 351
Query: 925 SWKARDLSFA 954
SW +R LSFA
Sbjct: 352 SWSSRFLSFA 361
>gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1447
Score = 72.4 bits (176), Expect(2) = 2e-20
Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Frame = +2
Query: 1064 ANTVSNLRHIWDIISNKETIWVTWVKNSLIKHKDFWLLDC-----SWCWRRILDHRDMAS 1228
AN V L+ IW I+S+ +++WV W++ +L+K+ FW++ SW W+++L +R++A
Sbjct: 1106 ANDVCCLKLIWRILSHGDSLWVKWIETNLLKNNSFWIIKSSTTMGSWMWKKLLKYREVAK 1165
Query: 1229 QFFLQLIGNGEDTKLWKDKWLPQGNLLS 1312
F + NG+ T W D W G +++
Sbjct: 1166 TFSKIEVHNGQRTSFWYDDWSCMGRIMN 1193
Score = 55.1 bits (131), Expect(2) = 2e-20
Identities = 27/67 (40%), Positives = 43/67 (64%)
Frame = +1
Query: 796 IRSVLGFEVGTLPIRYLGLPLLSTRLSHSDCIPLFDHIITRIKSWKARDLSFAVPMGMYR 975
+ +L G LP+RYLGLPL++ RLS +D +PL + I RI +W +R LS+A + +
Sbjct: 1028 LSKMLDKAAGQLPVRYLGLPLVTKRLSSADSLPLIEQIRHRIGTWTSRFLSYAGRLNLIS 1087
Query: 976 THLQAIS 996
+ L +I+
Sbjct: 1088 SVLSSIT 1094
>gb|ABW81094.1| RT6non-ltr [Cleome spinosa]
Length = 459
Score = 77.8 bits (190), Expect(2) = 3e-20
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Frame = +2
Query: 998 VRWSIVCLPYEEGDLGI*CIEIANTVSNLRHIWDIISNKETIWVTWVKNSLIKHKDFW-- 1171
V W+I+C P +EG L +E N V L+ +W + ++WV W+K +++K FW
Sbjct: 199 VAWNIICRPRKEGGLNSKKLEELNKVFRLKMVWRVFKYASSLWVAWLKRNVLKRGSFWDT 258
Query: 1172 --LLDCSWCWRRILDHRDMASQFFLQLIGNGEDTKLWKDKWLPQGNLL 1309
SW R++L+ +D+A +F IGNG W D W G LL
Sbjct: 259 VPTARHSWNVRKLLNMKDLAGKFIRCRIGNGNMASFWFDNWTDLGPLL 306
Score = 48.9 bits (115), Expect(2) = 3e-20
Identities = 21/65 (32%), Positives = 39/65 (60%)
Frame = +1
Query: 760 FISSVNASTALSIRSVLGFEVGTLPIRYLGLPLLSTRLSHSDCIPLFDHIITRIKSWKAR 939
F+ + S + S +G +G P++YLGLP+ + RL+ +D PL + I ++ +W ++
Sbjct: 108 FLGGLTDSEKQELSSCMGITLGNFPMKYLGLPVNTHRLTKADYEPLLEKIRAKVSNWSSK 167
Query: 940 DLSFA 954
LS+A
Sbjct: 168 LLSYA 172
>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1| AT4g02490
[Arabidopsis thaliana]
Length = 657
Score = 70.5 bits (171), Expect(2) = 6e-20
Identities = 34/120 (28%), Positives = 59/120 (49%)
Frame = +2
Query: 956 FLWACIELTYKQSAVRWSIVCLPYEEGDLGI*CIEIANTVSNLRHIWDIISNKETIWVTW 1135
FLW+ + +++ + W IVC E G LG+ + N V L+ IW + + ++WV+W
Sbjct: 387 FLWSGAPNSAREAKISWDIVCSSKESGGLGLKRLSSWNKVLALKLIWLLFTASGSLWVSW 446
Query: 1136 VKNSLIKHKDFWLLDCSWCWRRILDHRDMASQFFLQLIGNGEDTKLWKDKWLPQGNLLSL 1315
V+ W WR++ R++A F + +G+G + W+D W G L+ L
Sbjct: 447 VR---------------WVWRKLCKLREVARPFVICEVGSGITARFWQDNWTGHGPLIHL 491
Score = 55.5 bits (132), Expect(2) = 6e-20
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +1
Query: 808 LGFEVGTLPIRYLGLPLLSTRLSHSDCIPLFDHIITRIKSWKARDLSFA 954
LG G+LP+RYLG+PL+S ++ D PL D I +R SW AR LSFA
Sbjct: 301 LGVSQGSLPVRYLGVPLMSQKMKKHDYQPLVDRINSRFTSWTARHLSFA 349
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 104 bits (259), Expect = 1e-19
Identities = 47/124 (37%), Positives = 75/124 (60%), Gaps = 5/124 (4%)
Frame = +2
Query: 959 LWACIELTYKQSAVRWSIVCLPYEEGDLGI*CIEIANTVSNLRHIWDIISNKETIWVTWV 1138
LW+ EL K++ V W +C P +EG LG+ + AN VS+L+ IW ++S ++++WV W
Sbjct: 568 LWSGPELNPKKAKVSWDEICKPKKEGGLGLQSLREANKVSSLKLIWRLLSCQDSLWVKWT 627
Query: 1139 KNSLIKHKDFWLLDC-----SWCWRRILDHRDMASQFFLQLIGNGEDTKLWKDKWLPQGN 1303
+ +L+K + FW + SW WRR+L HR++A F + NG +T W D W +G
Sbjct: 628 RMNLLKKESFWSIGTHSTLGSWIWRRLLKHREVAKSFCKIEVNNGVNTSFWFDNWSEKGP 687
Query: 1304 LLSL 1315
L++L
Sbjct: 688 LINL 691
Score = 58.9 bits (141), Expect = 5e-06
Identities = 32/79 (40%), Positives = 48/79 (60%)
Frame = +1
Query: 760 FISSVNASTALSIRSVLGFEVGTLPIRYLGLPLLSTRLSHSDCIPLFDHIITRIKSWKAR 939
+++ V+ + + S F VG LP+RYLGLPL++ RL+ SD PL D I RI W +R
Sbjct: 465 YLAGVSDHSRQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTSDYSPLIDQIRRRIGMWTSR 524
Query: 940 DLSFAVPMGMYRTHLQAIS 996
LSFA + + + L +I+
Sbjct: 525 YLSFAGRLSLINSVLWSIT 543
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 103 bits (258), Expect = 1e-19
Identities = 50/123 (40%), Positives = 68/123 (55%), Gaps = 5/123 (4%)
Frame = +2
Query: 956 FLWACIELTYKQSAVRWSIVCLPYEEGDLGI*CIEIANTVSNLRHIWDIISNKETIWVTW 1135
FLW+ E++ ++ + W IVC P EG LG+ ++ AN VS L+ +W IISN ++W W
Sbjct: 493 FLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTKW 552
Query: 1136 VKNSLIKHKDFWLLD-----CSWCWRRILDHRDMASQFFLQLIGNGEDTKLWKDKWLPQG 1300
V LI+ K W L SW WR+IL RD+A F +GNGE W D W G
Sbjct: 553 VAEYLIRKKSIWSLKQSTSMGSWIWRKILKIRDVAKSFSRVEVGNGESASFWYDHWSAHG 612
Query: 1301 NLL 1309
L+
Sbjct: 613 RLI 615
>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 100 bits (250), Expect = 1e-18
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Frame = +2
Query: 809 WASKLALYLSGILASHFSLLASLTQTASPFLITSLLE*SLGKPETSPL--QFLWACIELT 982
W S+ YLS A +L++S+ + F +++ S E + + FLW+ EL
Sbjct: 205 WTSR---YLS--FAGRLNLISSVLWSTMNFWMSAFRLPSACLKEINSICSAFLWSGPELH 259
Query: 983 YKQSAVRWSIVCLPYEEGDLGI*CIEIANTVSNLRHIWDIISNKETIWVTWVKNSLIKHK 1162
+++ V W +C P +EG LG+ + AN VS L+ IW + SN +++WV W K +L+K +
Sbjct: 260 RRKAKVSWDDICKPKQEGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQE 319
Query: 1163 DFWLLD-----CSWCWRRILDHRDMASQFFLQLIGNGEDTKLWKDKWLPQGNLLSLFPQ 1324
FW L SW W+++L +R+ A F + NG T W D W G+L+ + Q
Sbjct: 320 SFWSLTPNSSLGSWMWKKMLKYRETAKPFSRVEVNNGARTSFWFDNWSGMGHLMDVTGQ 378
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 77.0 bits (188), Expect(3) = 1e-18
Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 4/123 (3%)
Frame = +2
Query: 956 FLWACIELTYKQSAVRWSIVCLPYEEGDLGI*CIEIANTVSNLRHIWDIISNKETIWVTW 1135
FLW T K +V W+ +C P EG LG+ N + W I SN + +WV
Sbjct: 829 FLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKV 888
Query: 1136 VKNSLIKHKDFWLL----DCSWCWRRILDHRDMASQFFLQLIGNGEDTKLWKDKWLPQGN 1303
++ +K+ DF L +CSW WR I+ +D+ + +GNG W D W+ G
Sbjct: 889 LREKYVKNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDGP 948
Query: 1304 LLS 1312
L S
Sbjct: 949 LAS 951
Score = 42.4 bits (98), Expect(3) = 1e-18
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +1
Query: 766 SSVNASTALSIRSVLGFEVGTLPIRYLGLPLLSTRLSHSDCIPLFDHIITRIKSWKARDL 945
S+VNA +I S+L V YLG+P+L R+S + + D + T++ SWKA L
Sbjct: 729 SNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSL 788
Query: 946 SFA 954
+ A
Sbjct: 789 NMA 791
Score = 21.6 bits (44), Expect(3) = 1e-18
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 705 LISFSNKSGLIANNRKSNIY 764
L SFSN SGL N KS ++
Sbjct: 707 LDSFSNASGLKVNFSKSLLF 726
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 77.0 bits (188), Expect(3) = 1e-18
Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 4/123 (3%)
Frame = +2
Query: 956 FLWACIELTYKQSAVRWSIVCLPYEEGDLGI*CIEIANTVSNLRHIWDIISNKETIWVTW 1135
FLW T K +V W+ +C P EG LG+ N + W I SN + +WV
Sbjct: 829 FLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKV 888
Query: 1136 VKNSLIKHKDFWLL----DCSWCWRRILDHRDMASQFFLQLIGNGEDTKLWKDKWLPQGN 1303
++ +K+ DF L +CSW WR I+ +D+ + +GNG W D W+ G
Sbjct: 889 LREKYVKNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDGP 948
Query: 1304 LLS 1312
L S
Sbjct: 949 LAS 951
Score = 42.4 bits (98), Expect(3) = 1e-18
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +1
Query: 766 SSVNASTALSIRSVLGFEVGTLPIRYLGLPLLSTRLSHSDCIPLFDHIITRIKSWKARDL 945
S+VNA +I S+L V YLG+P+L R+S + + D + T++ SWKA L
Sbjct: 729 SNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSL 788
Query: 946 SFA 954
+ A
Sbjct: 789 NMA 791
Score = 21.6 bits (44), Expect(3) = 1e-18
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 705 LISFSNKSGLIANNRKSNIY 764
L SFSN SGL N KS ++
Sbjct: 707 LDSFSNASGLKVNFSKSLLF 726
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 662
Score = 100 bits (248), Expect = 2e-18
Identities = 47/132 (35%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
Frame = +2
Query: 956 FLWACIELTYKQSAVRWSIVCLPYEEGDLGI*CIEIANTVSNLRHIWDIISNKETIWVTW 1135
FLW+ EL+ ++ + W VC P EG LG+ I+ AN V L+ IW I+S +++WV W
Sbjct: 364 FLWSGPELSTNKAKIAWETVCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQW 423
Query: 1136 VKNSLIKHKDFWLL----DCSWCWRRILDHRDMASQFFLQLIGNGEDTKLWKDKWLPQGN 1303
++ L+K FW SW W+++L +RD A F I NGE W D W +G
Sbjct: 424 IRTYLLKRNTFWSFRSASQGSWMWKKLLKYRDTAKAFSKVDIRNGETASFWYDDWSSKGR 483
Query: 1304 LLSLFPQHLLYD 1339
L+ + + +D
Sbjct: 484 LIDVLGERGQFD 495
>ref|XP_004149382.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
sativus]
Length = 268
Score = 61.2 bits (147), Expect(2) = 2e-18
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Frame = +1
Query: 760 FISSVNASTALSIRSVLGFEVGTLPIRYLGLPLLSTRLSHSDCIPLFDHIITRIKSWKAR 939
F+ VN+S A + + + F +G LP+R+LGLPLLS RL SDC PL I + I+SW +
Sbjct: 74 FLVGVNSSKASWLAANMDFSIGHLPVRHLGLPLLSGRLRSSDCDPLIQRITSHIRSWSLQ 133
Query: 940 ---DLSFAVPMGMYR 975
F +PM ++R
Sbjct: 134 VYWASVFMLPMKVHR 148
Score = 59.3 bits (142), Expect(2) = 2e-18
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Frame = +2
Query: 956 FLWACIELTYKQSAVRWSIVCLPYEEGDLGI*CIEIANTVSNLRHIWDIISNKETIWVTW 1135
+LW E + V W VCLP++EG L +I + S W+I + + +W+
Sbjct: 157 YLWRGKEEGRGGAKVAWDEVCLPFDEGGL-----DIRDGSS-----WNIATTLKILWLLL 206
Query: 1136 VKNSLIKHKDFWLLDC----SWCWRRILDHRDMASQFFLQLIGNGEDTKLWKDKWLPQGN 1303
VK+ + W +D SWC+R IL RD+ +GNG ++W W+ G
Sbjct: 207 VKSG----RSLWEIDVGVGRSWCFREILRKRDILKAHVKMKVGNGRKCRVWLVPWIQGGL 262
Query: 1304 LLSLF 1318
++ F
Sbjct: 263 IIQQF 267
>dbj|BAB08692.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana] gi|93007380|gb|ABE97193.1| hypothetical protein
At5g13655 [Arabidopsis thaliana]
Length = 385
Score = 99.8 bits (247), Expect = 3e-18
Identities = 51/146 (34%), Positives = 75/146 (51%), Gaps = 5/146 (3%)
Frame = +2
Query: 956 FLWACIELTYKQSAVRWSIVCLPYEEGDLGI*CIEIANTVSNLRHIWDIISNKETIWVTW 1135
FLW+ L +++ V WS+VC P EG LG+ +E N V L+ IW I+S K ++WV W
Sbjct: 5 FLWSGPSLNARKTKVAWSVVCTPKSEGGLGLRAVEETNKVCMLKLIWRILSAKGSLWVDW 64
Query: 1136 VKNSLIKHKDFWLLD-----CSWCWRRILDHRDMASQFFLQLIGNGEDTKLWKDKWLPQG 1300
VK L++ W + SW W+++L +RD A F + NGE T W D W G
Sbjct: 65 VKKHLLRGGSLWAVKETSSRGSWIWKKLLKYRDKAKCFHKVDVRNGESTSFWYDSWSSLG 124
Query: 1301 NLLSLFPQHLLYDSVHHLDARVSTCL 1378
L F + D D+ +S+ +
Sbjct: 125 CLYDKFGERGCIDMGIPKDSTLSSAI 150
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 99.8 bits (247), Expect = 3e-18
Identities = 49/133 (36%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
Frame = +2
Query: 956 FLWACIELTYKQSAVRWSIVCLPYEEGDLGI*CIEIANTVSNLRHIWDIISNKETIWVTW 1135
FLWA + V WS +CLP EG LGI + N + HIW+++S+ W W
Sbjct: 668 FLWAGNCSGRAATKVAWSEICLPKCEGGLGIKDLHCWNKALMISHIWNLVSSSSNFWTDW 727
Query: 1136 VKNSLIKHKDFWLLD----CSWCWRRILDHRDMASQFFLQLIGNGEDTKLWKDKWLPQGN 1303
VK L+K FW CSW WR++L R++ FF+ +IG+G T LW D W P G
Sbjct: 728 VKVYLLKGNSFWNAPLPSICSWNWRKLLKIRELCCSFFVNIIGDGRATSLWFDNWHPLGP 787
Query: 1304 LLSLFPQHLLYDS 1342
L + +++ +S
Sbjct: 788 LTLRWSSNIIGES 800
Score = 72.8 bits (177), Expect = 3e-10
Identities = 34/82 (41%), Positives = 55/82 (67%)
Frame = +1
Query: 748 ERATFISSVNASTALSIRSVLGFEVGTLPIRYLGLPLLSTRLSHSDCIPLFDHIITRIKS 927
E F++ V+ +++ S+ V F +GT P+RYLG+PL++++L DC PL D I TRIKS
Sbjct: 562 ESKIFLAGVDGNSSDSVLQVTNFSLGTCPVRYLGIPLITSKLRMQDCSPLLDRIETRIKS 621
Query: 928 WKARDLSFAVPMGMYRTHLQAI 993
W+ + LSFA + + ++ L +I
Sbjct: 622 WENKVLSFAGRLQLIQSVLSSI 643
>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
Length = 441
Score = 99.8 bits (247), Expect = 3e-18
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 7/199 (3%)
Frame = +2
Query: 806 CWASKLALYLSGILASHFSLLASLTQTASPFLITSLLE*SLGKPETSPL--QFLWACIEL 979
CW ++ +LS A L++S+ + + F +++ + E L FLW+ EL
Sbjct: 19 CWTAR---HLS--FAGRLQLISSVIHSLTNFWMSAFRLPNACIKEIDGLCSAFLWSGPEL 73
Query: 980 TYKQSAVRWSIVCLPYEEGDLGI*CIEIANTVSNLRHIWDIISNKETIWVTWVKNSLIKH 1159
K++ V W+ VC+P EEG LG+ + AN V L+ IW ++S+ ++WV W++ +I+
Sbjct: 74 NRKKAKVSWNDVCMPKEEGGLGLRSLTEANKVCCLKLIWRLLSS-SSLWVQWLRQYVIRK 132
Query: 1160 KDFWLLD-----CSWCWRRILDHRDMASQFFLQLIGNGEDTKLWKDKWLPQGNLLSLFPQ 1324
FW L SW WR++L +R +AS F I NG+ W D W P G L+++
Sbjct: 133 GSFWSLRDTSTLGSWMWRKLLKYRHLASGFTQYEIRNGKGVSFWHDNWSPLGPLIAISGT 192
Query: 1325 HLLYDSVHHLDARVSTCLT 1381
D + A V+ LT
Sbjct: 193 RGCIDMGIDIHATVAEALT 211
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 99.0 bits (245), Expect = 4e-18
Identities = 51/174 (29%), Positives = 89/174 (51%), Gaps = 7/174 (4%)
Frame = +2
Query: 809 WASKLALYLSGILASHFSLLASLTQTASPFLITS--LLE*SLGKPETSPLQFLWACIELT 982
W S+ Y A +L++S+ + F + + L + + E FLW+ E+
Sbjct: 800 WTSRFLSY-----AGRLNLISSVLWSICNFWLAAFRLPRKCIRELEKMCSAFLWSGTEMN 854
Query: 983 YKQSAVRWSIVCLPYEEGDLGI*CIEIANTVSNLRHIWDIISNKETIWVTWVKNSLIKHK 1162
++ + W +VC P +EG LG+ ++ AN V L+ +W I+S+ ++WV WV L+++
Sbjct: 855 SNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNA 914
Query: 1163 DFW-----LLDCSWCWRRILDHRDMASQFFLQLIGNGEDTKLWKDKWLPQGNLL 1309
FW + SW W+++L +R++A +GNG+ T W D W G LL
Sbjct: 915 SFWEVKQTVSQGSWIWKKLLKYREVAKTLSKVEVGNGKQTSFWYDNWSDLGQLL 968
Score = 62.8 bits (151), Expect = 4e-07
Identities = 31/83 (37%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +1
Query: 748 ERAT-FISSVNASTALSIRSVLGFEVGTLPIRYLGLPLLSTRLSHSDCIPLFDHIITRIK 924
E++T +++ ++A+ + F G LP+RYLGLPL++ RLS +DC+PL + + RI
Sbjct: 739 EKSTVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIG 798
Query: 925 SWKARDLSFAVPMGMYRTHLQAI 993
SW +R LS+A + + + L +I
Sbjct: 799 SWTSRFLSYAGRLNLISSVLWSI 821
>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
putative protein [Arabidopsis thaliana]
Length = 473
Score = 99.0 bits (245), Expect = 4e-18
Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
Frame = +2
Query: 956 FLWACIELTYKQSAVRWSIVCLPYEEGDLGI*CIEIANTVSNLRHIWDIISNKETIWVTW 1135
+LW+ EL ++ + W+ VC P EEG LG+ ++ AN V L+ IW IIS+ +++WV W
Sbjct: 95 YLWSGGELNTSKAKITWAFVCKPKEEGGLGLRSLKEANDVCCLKLIWRIISHADSLWVKW 154
Query: 1136 VKNSLIKHKDFWLLD-----CSWCWRRILDHRDMASQFFLQLIGNGEDTKLWKDKWLPQG 1300
+++SL+K FW + SW WR+IL RD+A I NG T W D W G
Sbjct: 155 IQSSLLKKVSFWAVRENTSLGSWMWRKILKFRDIARTLCKVEINNGARTSFWYDDWSDLG 214
Query: 1301 NLL 1309
L+
Sbjct: 215 RLI 217
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 77.0 bits (188), Expect(2) = 5e-18
Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 4/123 (3%)
Frame = +2
Query: 956 FLWACIELTYKQSAVRWSIVCLPYEEGDLGI*CIEIANTVSNLRHIWDIISNKETIWVTW 1135
FLW T K +V W+ +C P EG LG+ N + W I SN + +WV
Sbjct: 1361 FLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKV 1420
Query: 1136 VKNSLIKHKDFWLL----DCSWCWRRILDHRDMASQFFLQLIGNGEDTKLWKDKWLPQGN 1303
++ +K+ DF L +CSW WR I+ +D+ + +GNG W D W+ G
Sbjct: 1421 LREKYVKNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDGP 1480
Query: 1304 LLS 1312
L S
Sbjct: 1481 LAS 1483
Score = 42.4 bits (98), Expect(2) = 5e-18
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +1
Query: 766 SSVNASTALSIRSVLGFEVGTLPIRYLGLPLLSTRLSHSDCIPLFDHIITRIKSWKARDL 945
S+VNA +I S+L V YLG+P+L R+S + + D + T++ SWKA L
Sbjct: 1261 SNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSL 1320
Query: 946 SFA 954
+ A
Sbjct: 1321 NMA 1323
>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 98.6 bits (244), Expect = 6e-18
Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
Frame = +2
Query: 956 FLWACIELTYKQSAVRWSIVCLPYEEGDLGI*CIEIANTVSNLRHIWDIISNKETIWVTW 1135
+LW+ EL ++ + W+ VC P EEG LG+ ++ AN V L+ IW IIS+ +++WV W
Sbjct: 176 YLWSGGELNTSKAKIAWAFVCKPKEEGGLGLRSLKEANDVCCLKLIWRIISHADSLWVKW 235
Query: 1136 VKNSLIKHKDFWLLD-----CSWCWRRILDHRDMASQFFLQLIGNGEDTKLWKDKWLPQG 1300
+++SL+K FW + SW WR+IL RD+A I NG T W D W G
Sbjct: 236 IQSSLLKKVFFWAVRENTSLGSWMWRKILKFRDIARTLCKVEINNGAQTSFWYDDWSDLG 295
Query: 1301 NLL 1309
L+
Sbjct: 296 RLI 298
Score = 63.2 bits (152), Expect = 3e-07
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +1
Query: 748 ERAT-FISSVNASTALSIRSVLGFEVGTLPIRYLGLPLLSTRLSHSDCIPLFDHIITRIK 924
E++T +++ ++ +T + F VGTLP+RYLGLPL++ + S +D +PL DHI +I
Sbjct: 69 EKSTVYLAGLSHTTRQEVIDRFSFAVGTLPVRYLGLPLVTKQFSSTDYLPLIDHIKQKIC 128
Query: 925 SWKARDLSFAVPMGMYRTHLQAI 993
SW AR LS+ + + + L +I
Sbjct: 129 SWSARFLSYTGRLNLISSILWSI 151