BLASTX nr result
ID: Papaver27_contig00033978
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00033978
(1202 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III s... 170 9e-62
ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III s... 169 2e-61
ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III s... 166 2e-60
ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s... 166 2e-60
ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III s... 166 2e-60
emb|CBI35070.3| unnamed protein product [Vitis vinifera] 166 2e-60
ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s... 166 2e-60
ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citr... 165 3e-60
ref|XP_007220218.1| hypothetical protein PRUPE_ppa002270mg [Prun... 164 6e-60
ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theob... 163 2e-59
ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theob... 163 2e-59
ref|XP_006362278.1| PREDICTED: DNA-directed RNA polymerase III s... 167 2e-59
ref|XP_007010805.1| DNA-directed RNA polymerase isoform 7 [Theob... 163 2e-59
ref|XP_004308665.1| PREDICTED: DNA-directed RNA polymerase III s... 162 2e-59
ref|XP_007152964.1| hypothetical protein PHAVU_004G175000g [Phas... 162 2e-59
ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arab... 163 3e-59
ref|XP_004249177.1| PREDICTED: DNA-directed RNA polymerase III s... 166 3e-59
ref|XP_003627473.1| DNA-directed RNA polymerase III subunit RPC2... 160 1e-58
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put... 160 2e-58
ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III s... 161 2e-58
>ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
X1 [Solanum tuberosum] gi|565393087|ref|XP_006362215.1|
PREDICTED: DNA-directed RNA polymerase III subunit
RPC2-like isoform X2 [Solanum tuberosum]
Length = 1153
Score = 170 bits (431), Expect(2) = 9e-62
Identities = 98/172 (56%), Positives = 114/172 (66%), Gaps = 35/172 (20%)
Frame = -2
Query: 646 ADTVESINKTLVEKGFSYNGKRFS------------VFRT*NHAHKTIH----------- 536
ADTV+SI++TLV+ GFSYNGK F +F + K H
Sbjct: 982 ADTVDSISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDKMHARGS 1041
Query: 535 -----------RRKSRDAGLQVGEMERDCLIA*GASMLIYERLMISGNPFEVQVCRACGL 389
+SR+ GL+VGEMERDCLIA GASMLIYERLMIS +PFEVQVCR CGL
Sbjct: 1042 GPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRKCGL 1101
Query: 388 SGYYNHKLKIGVCS-*KNYETMSKMKLPYACKLLFQELQSMNIVPRMKVSEA 236
GYYN+KLK G+CS KN E +S MKLPYACKLLFQELQSMNIVPR+K++EA
Sbjct: 1102 LGYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQELQSMNIVPRLKLAEA 1153
Score = 95.1 bits (235), Expect(2) = 9e-62
Identities = 44/56 (78%), Positives = 50/56 (89%), Gaps = 1/56 (1%)
Frame = -1
Query: 818 KGVCGTIVQKEDFPFSEQGICPDLVMNHHGFGNGMTMGKMIELLG-VTGLSCGRFH 654
KGVCGTIVQ+EDFPFSE+GICPDL+MN HGF + MT+GKMIELLG G+SCGRFH
Sbjct: 915 KGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFH 970
>ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Solanum
lycopersicum]
Length = 1183
Score = 169 bits (428), Expect(2) = 2e-61
Identities = 97/172 (56%), Positives = 114/172 (66%), Gaps = 35/172 (20%)
Frame = -2
Query: 646 ADTVESINKTLVEKGFSYNGKRFS------------VFRT*NHAHKTIH----------- 536
ADTV++I++TLV+ GFSYNGK F +F + K H
Sbjct: 1012 ADTVDAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVVDKMHARGS 1071
Query: 535 -----------RRKSRDAGLQVGEMERDCLIA*GASMLIYERLMISGNPFEVQVCRACGL 389
+SR+ GL+VGEMERDCLIA GASMLIYERLMIS +PFEVQVCR CGL
Sbjct: 1072 GPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRKCGL 1131
Query: 388 SGYYNHKLKIGVCS-*KNYETMSKMKLPYACKLLFQELQSMNIVPRMKVSEA 236
GYYN+KLK G+CS KN E +S MKLPYACKLLFQELQSMNIVPR+K++EA
Sbjct: 1132 LGYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQELQSMNIVPRLKLAEA 1183
Score = 95.1 bits (235), Expect(2) = 2e-61
Identities = 44/56 (78%), Positives = 50/56 (89%), Gaps = 1/56 (1%)
Frame = -1
Query: 818 KGVCGTIVQKEDFPFSEQGICPDLVMNHHGFGNGMTMGKMIELLG-VTGLSCGRFH 654
KGVCGTIVQ+EDFPFSE+GICPDL+MN HGF + MT+GKMIELLG G+SCGRFH
Sbjct: 945 KGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFH 1000
>ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
X1 [Citrus sinensis] gi|568883651|ref|XP_006494573.1|
PREDICTED: DNA-directed RNA polymerase III subunit
RPC2-like isoform X2 [Citrus sinensis]
Length = 1149
Score = 166 bits (420), Expect(2) = 2e-60
Identities = 94/172 (54%), Positives = 113/172 (65%), Gaps = 35/172 (20%)
Frame = -2
Query: 646 ADTVESINKTLVEKGFSYNGK------------RFSVFRT*NHAHKTIH----------- 536
ADTVESI++TLV+ GFSYNGK + +F + K H
Sbjct: 978 ADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGS 1037
Query: 535 -----------RRKSRDAGLQVGEMERDCLIA*GASMLIYERLMISGNPFEVQVCRACGL 389
++R+ GL+VGEMERDCLIA GASMLI+ERLM+S +PFEVQVCR CGL
Sbjct: 1038 GPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRVCGL 1097
Query: 388 SGYYNHKLKIGVCS-*KNYETMSKMKLPYACKLLFQELQSMNIVPRMKVSEA 236
GYYNHKLK G+CS KN + +S MKLPYACKLL QELQSMNIVPR+K++EA
Sbjct: 1098 LGYYNHKLKAGICSTCKNGDNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1149
Score = 95.1 bits (235), Expect(2) = 2e-60
Identities = 44/56 (78%), Positives = 50/56 (89%), Gaps = 1/56 (1%)
Frame = -1
Query: 818 KGVCGTIVQKEDFPFSEQGICPDLVMNHHGFGNGMTMGKMIELL-GVTGLSCGRFH 654
KGVCGTIVQ+EDFPFSE+GICPDL+MN HGF + MT+GKMIELL G G+SCGRFH
Sbjct: 911 KGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFH 966
>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
vinifera]
Length = 1142
Score = 166 bits (421), Expect(2) = 2e-60
Identities = 93/172 (54%), Positives = 114/172 (66%), Gaps = 35/172 (20%)
Frame = -2
Query: 646 ADTVESINKTLVEKGFSYNGKRFS------------VFRT*NHAHKTIH----------- 536
AD VE+I+KTLV+ GFSY+GK F +F + K H
Sbjct: 971 ADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGS 1030
Query: 535 -----------RRKSRDAGLQVGEMERDCLIA*GASMLIYERLMISGNPFEVQVCRACGL 389
++R+ GL+VGEMERDCLIA GASMLI+ERLM+S +PFEVQVCR CGL
Sbjct: 1031 GPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRVCGL 1090
Query: 388 SGYYNHKLKIGVCS-*KNYETMSKMKLPYACKLLFQELQSMNIVPRMKVSEA 236
GYYNHKLKIG+CS KN + +S MKLPYACKLLFQELQ+MN+VPR+K++EA
Sbjct: 1091 LGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVPRLKLTEA 1142
Score = 94.7 bits (234), Expect(2) = 2e-60
Identities = 43/56 (76%), Positives = 50/56 (89%), Gaps = 1/56 (1%)
Frame = -1
Query: 818 KGVCGTIVQKEDFPFSEQGICPDLVMNHHGFGNGMTMGKMIELL-GVTGLSCGRFH 654
KGVCGTI+Q+EDFPFSE+GICPDL+MN HGF + MT+GKMIELL G G+SCGRFH
Sbjct: 904 KGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFH 959
>ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
X3 [Citrus sinensis]
Length = 1058
Score = 166 bits (420), Expect(2) = 2e-60
Identities = 94/172 (54%), Positives = 113/172 (65%), Gaps = 35/172 (20%)
Frame = -2
Query: 646 ADTVESINKTLVEKGFSYNGK------------RFSVFRT*NHAHKTIH----------- 536
ADTVESI++TLV+ GFSYNGK + +F + K H
Sbjct: 887 ADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGS 946
Query: 535 -----------RRKSRDAGLQVGEMERDCLIA*GASMLIYERLMISGNPFEVQVCRACGL 389
++R+ GL+VGEMERDCLIA GASMLI+ERLM+S +PFEVQVCR CGL
Sbjct: 947 GPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRVCGL 1006
Query: 388 SGYYNHKLKIGVCS-*KNYETMSKMKLPYACKLLFQELQSMNIVPRMKVSEA 236
GYYNHKLK G+CS KN + +S MKLPYACKLL QELQSMNIVPR+K++EA
Sbjct: 1007 LGYYNHKLKAGICSTCKNGDNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1058
Score = 95.1 bits (235), Expect(2) = 2e-60
Identities = 44/56 (78%), Positives = 50/56 (89%), Gaps = 1/56 (1%)
Frame = -1
Query: 818 KGVCGTIVQKEDFPFSEQGICPDLVMNHHGFGNGMTMGKMIELL-GVTGLSCGRFH 654
KGVCGTIVQ+EDFPFSE+GICPDL+MN HGF + MT+GKMIELL G G+SCGRFH
Sbjct: 820 KGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFH 875
>emb|CBI35070.3| unnamed protein product [Vitis vinifera]
Length = 461
Score = 166 bits (421), Expect(2) = 2e-60
Identities = 93/172 (54%), Positives = 114/172 (66%), Gaps = 35/172 (20%)
Frame = -2
Query: 646 ADTVESINKTLVEKGFSYNGKRFS------------VFRT*NHAHKTIH----------- 536
AD VE+I+KTLV+ GFSY+GK F +F + K H
Sbjct: 290 ADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGS 349
Query: 535 -----------RRKSRDAGLQVGEMERDCLIA*GASMLIYERLMISGNPFEVQVCRACGL 389
++R+ GL+VGEMERDCLIA GASMLI+ERLM+S +PFEVQVCR CGL
Sbjct: 350 GPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRVCGL 409
Query: 388 SGYYNHKLKIGVCS-*KNYETMSKMKLPYACKLLFQELQSMNIVPRMKVSEA 236
GYYNHKLKIG+CS KN + +S MKLPYACKLLFQELQ+MN+VPR+K++EA
Sbjct: 410 LGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVPRLKLTEA 461
Score = 94.7 bits (234), Expect(2) = 2e-60
Identities = 43/56 (76%), Positives = 50/56 (89%), Gaps = 1/56 (1%)
Frame = -1
Query: 818 KGVCGTIVQKEDFPFSEQGICPDLVMNHHGFGNGMTMGKMIELL-GVTGLSCGRFH 654
KGVCGTI+Q+EDFPFSE+GICPDL+MN HGF + MT+GKMIELL G G+SCGRFH
Sbjct: 223 KGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFH 278
>ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cucumis
sativus]
Length = 1158
Score = 166 bits (419), Expect(2) = 2e-60
Identities = 93/172 (54%), Positives = 113/172 (65%), Gaps = 35/172 (20%)
Frame = -2
Query: 646 ADTVESINKTLVEKGFSYNGKRFS------------VFRT*NHAHKTIH----------- 536
AD V++I++TL+++GFSYNGK F +F + K H
Sbjct: 987 ADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGS 1046
Query: 535 -----------RRKSRDAGLQVGEMERDCLIA*GASMLIYERLMISGNPFEVQVCRACGL 389
++R+ GL+VGEMERDCLIA GASMLIYERLMIS +PFEVQVCR CGL
Sbjct: 1047 GPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRVCGL 1106
Query: 388 SGYYNHKLKIGVC-S*KNYETMSKMKLPYACKLLFQELQSMNIVPRMKVSEA 236
GYYNHKLK G+C S KN + +S MKLPYACKLL QELQSMNIVPR+K++EA
Sbjct: 1107 LGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1158
Score = 95.1 bits (235), Expect(2) = 2e-60
Identities = 44/56 (78%), Positives = 50/56 (89%), Gaps = 1/56 (1%)
Frame = -1
Query: 818 KGVCGTIVQKEDFPFSEQGICPDLVMNHHGFGNGMTMGKMIELL-GVTGLSCGRFH 654
KGVCGTIVQ+EDFPFSE+GICPDL+MN HGF + MT+GKMIELL G G+SCGRFH
Sbjct: 920 KGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFH 975
>ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citrus clementina]
gi|557534507|gb|ESR45625.1| hypothetical protein
CICLE_v10000078mg [Citrus clementina]
Length = 1149
Score = 165 bits (418), Expect(2) = 3e-60
Identities = 94/172 (54%), Positives = 112/172 (65%), Gaps = 35/172 (20%)
Frame = -2
Query: 646 ADTVESINKTLVEKGFSYNGK------------RFSVFRT*NHAHKTIH----------- 536
ADTVESI++TLV+ GFSYNGK + +F + K H
Sbjct: 978 ADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGS 1037
Query: 535 -----------RRKSRDAGLQVGEMERDCLIA*GASMLIYERLMISGNPFEVQVCRACGL 389
++R+ GL+VGEMERDCLIA GASMLI+ERLM+S +PFEVQVCR CGL
Sbjct: 1038 GPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRVCGL 1097
Query: 388 SGYYNHKLKIGVCS-*KNYETMSKMKLPYACKLLFQELQSMNIVPRMKVSEA 236
GYYNHKLK G+CS KN +S MKLPYACKLL QELQSMNIVPR+K++EA
Sbjct: 1098 LGYYNHKLKAGICSTCKNGNNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1149
Score = 95.1 bits (235), Expect(2) = 3e-60
Identities = 44/56 (78%), Positives = 50/56 (89%), Gaps = 1/56 (1%)
Frame = -1
Query: 818 KGVCGTIVQKEDFPFSEQGICPDLVMNHHGFGNGMTMGKMIELL-GVTGLSCGRFH 654
KGVCGTIVQ+EDFPFSE+GICPDL+MN HGF + MT+GKMIELL G G+SCGRFH
Sbjct: 911 KGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFH 966
>ref|XP_007220218.1| hypothetical protein PRUPE_ppa002270mg [Prunus persica]
gi|462416680|gb|EMJ21417.1| hypothetical protein
PRUPE_ppa002270mg [Prunus persica]
Length = 693
Score = 164 bits (415), Expect(2) = 6e-60
Identities = 94/172 (54%), Positives = 111/172 (64%), Gaps = 35/172 (20%)
Frame = -2
Query: 646 ADTVESINKTLVEKGFSYNGKRFS------------VFRT*NHAHKTIH----------- 536
AD VE+I++TLV GFSY+GK F +F + K H
Sbjct: 522 ADKVEAISETLVRMGFSYDGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGS 581
Query: 535 -----------RRKSRDAGLQVGEMERDCLIA*GASMLIYERLMISGNPFEVQVCRACGL 389
K+R+ GL+VGEMERDCLIA GASML+YERLMIS +PFEVQVCR CGL
Sbjct: 582 GPRVSLTRQPTEGKARNGGLRVGEMERDCLIAYGASMLLYERLMISSDPFEVQVCRVCGL 641
Query: 388 SGYYNHKLKIGVC-S*KNYETMSKMKLPYACKLLFQELQSMNIVPRMKVSEA 236
GYYNHKLK G+C S KN + +S MKLPYACKLL QELQSMNIVPR+K++EA
Sbjct: 642 LGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 693
Score = 95.1 bits (235), Expect(2) = 6e-60
Identities = 44/56 (78%), Positives = 50/56 (89%), Gaps = 1/56 (1%)
Frame = -1
Query: 818 KGVCGTIVQKEDFPFSEQGICPDLVMNHHGFGNGMTMGKMIELL-GVTGLSCGRFH 654
KGVCGTIVQ+EDFPFSE+GICPDL+MN HGF + MT+GKMIELL G G+SCGRFH
Sbjct: 455 KGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFH 510
>ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
gi|508727712|gb|EOY19609.1| DNA-directed RNA polymerase
isoform 1 [Theobroma cacao]
Length = 1158
Score = 163 bits (412), Expect(2) = 2e-59
Identities = 93/172 (54%), Positives = 112/172 (65%), Gaps = 35/172 (20%)
Frame = -2
Query: 646 ADTVESINKTLVEKGFSYNGKRFS------------VFRT*NHAHKTIH----------- 536
AD VE+I++TL++ GFSYNGK F +F + K H
Sbjct: 987 ADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGN 1046
Query: 535 -----------RRKSRDAGLQVGEMERDCLIA*GASMLIYERLMISGNPFEVQVCRACGL 389
++R+ GL+VGEMERDCLIA GASMLI+ERLMIS +PFEVQVCR CGL
Sbjct: 1047 GPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEVQVCRKCGL 1106
Query: 388 SGYYNHKLKIGVC-S*KNYETMSKMKLPYACKLLFQELQSMNIVPRMKVSEA 236
GYY+HKLK G+C S KN + +S MKLPYACKLL QELQSMNIVPR+K+SEA
Sbjct: 1107 LGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQELQSMNIVPRLKLSEA 1158
Score = 94.7 bits (234), Expect(2) = 2e-59
Identities = 43/56 (76%), Positives = 50/56 (89%), Gaps = 1/56 (1%)
Frame = -1
Query: 818 KGVCGTIVQKEDFPFSEQGICPDLVMNHHGFGNGMTMGKMIELL-GVTGLSCGRFH 654
KGVCGTI+Q+EDFPFSE+GICPDL+MN HGF + MT+GKMIELL G G+SCGRFH
Sbjct: 920 KGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFH 975
>ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
gi|508727714|gb|EOY19611.1| DNA-directed RNA polymerase
isoform 3 [Theobroma cacao]
Length = 1153
Score = 163 bits (412), Expect(2) = 2e-59
Identities = 93/172 (54%), Positives = 112/172 (65%), Gaps = 35/172 (20%)
Frame = -2
Query: 646 ADTVESINKTLVEKGFSYNGKRFS------------VFRT*NHAHKTIH----------- 536
AD VE+I++TL++ GFSYNGK F +F + K H
Sbjct: 982 ADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGN 1041
Query: 535 -----------RRKSRDAGLQVGEMERDCLIA*GASMLIYERLMISGNPFEVQVCRACGL 389
++R+ GL+VGEMERDCLIA GASMLI+ERLMIS +PFEVQVCR CGL
Sbjct: 1042 GPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEVQVCRKCGL 1101
Query: 388 SGYYNHKLKIGVC-S*KNYETMSKMKLPYACKLLFQELQSMNIVPRMKVSEA 236
GYY+HKLK G+C S KN + +S MKLPYACKLL QELQSMNIVPR+K+SEA
Sbjct: 1102 LGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQELQSMNIVPRLKLSEA 1153
Score = 94.7 bits (234), Expect(2) = 2e-59
Identities = 43/56 (76%), Positives = 50/56 (89%), Gaps = 1/56 (1%)
Frame = -1
Query: 818 KGVCGTIVQKEDFPFSEQGICPDLVMNHHGFGNGMTMGKMIELL-GVTGLSCGRFH 654
KGVCGTI+Q+EDFPFSE+GICPDL+MN HGF + MT+GKMIELL G G+SCGRFH
Sbjct: 915 KGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFH 970
>ref|XP_006362278.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Solanum
tuberosum]
Length = 1151
Score = 167 bits (423), Expect(2) = 2e-59
Identities = 95/172 (55%), Positives = 114/172 (66%), Gaps = 35/172 (20%)
Frame = -2
Query: 646 ADTVESINKTLVEKGFSYNGKRFS------------VFRT*NHAHKTIH----------- 536
ADTV++I++TLV+ GFSYNGK F +F + K H
Sbjct: 980 ADTVDAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDKMHARGS 1039
Query: 535 -----------RRKSRDAGLQVGEMERDCLIA*GASMLIYERLMISGNPFEVQVCRACGL 389
+SR+ GL+VGEMERDCLIA GASMLI+ERLM+S +PFE QVCR CGL
Sbjct: 1040 GPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIHERLMLSSDPFEAQVCRKCGL 1099
Query: 388 SGYYNHKLKIGVCS-*KNYETMSKMKLPYACKLLFQELQSMNIVPRMKVSEA 236
GYYN+KLKIG+CS KN E MS +KLPYACKLLFQELQSMNIVPR+K++EA
Sbjct: 1100 LGYYNYKLKIGICSMCKNGENMSTLKLPYACKLLFQELQSMNIVPRLKLTEA 1151
Score = 90.5 bits (223), Expect(2) = 2e-59
Identities = 42/56 (75%), Positives = 48/56 (85%), Gaps = 1/56 (1%)
Frame = -1
Query: 818 KGVCGTIVQKEDFPFSEQGICPDLVMNHHGFGNGMTMGKMIELLG-VTGLSCGRFH 654
KGVCG IVQ+ED PFSE+GICPDL+MN HGF + MT+GKMIELLG G+SCGRFH
Sbjct: 913 KGVCGIIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFH 968
>ref|XP_007010805.1| DNA-directed RNA polymerase isoform 7 [Theobroma cacao]
gi|508727718|gb|EOY19615.1| DNA-directed RNA polymerase
isoform 7 [Theobroma cacao]
Length = 1082
Score = 163 bits (412), Expect(2) = 2e-59
Identities = 93/172 (54%), Positives = 112/172 (65%), Gaps = 35/172 (20%)
Frame = -2
Query: 646 ADTVESINKTLVEKGFSYNGKRFS------------VFRT*NHAHKTIH----------- 536
AD VE+I++TL++ GFSYNGK F +F + K H
Sbjct: 911 ADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGN 970
Query: 535 -----------RRKSRDAGLQVGEMERDCLIA*GASMLIYERLMISGNPFEVQVCRACGL 389
++R+ GL+VGEMERDCLIA GASMLI+ERLMIS +PFEVQVCR CGL
Sbjct: 971 GPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEVQVCRKCGL 1030
Query: 388 SGYYNHKLKIGVC-S*KNYETMSKMKLPYACKLLFQELQSMNIVPRMKVSEA 236
GYY+HKLK G+C S KN + +S MKLPYACKLL QELQSMNIVPR+K+SEA
Sbjct: 1031 LGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQELQSMNIVPRLKLSEA 1082
Score = 94.7 bits (234), Expect(2) = 2e-59
Identities = 43/56 (76%), Positives = 50/56 (89%), Gaps = 1/56 (1%)
Frame = -1
Query: 818 KGVCGTIVQKEDFPFSEQGICPDLVMNHHGFGNGMTMGKMIELL-GVTGLSCGRFH 654
KGVCGTI+Q+EDFPFSE+GICPDL+MN HGF + MT+GKMIELL G G+SCGRFH
Sbjct: 844 KGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFH 899
>ref|XP_004308665.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
[Fragaria vesca subsp. vesca]
Length = 1163
Score = 162 bits (410), Expect(2) = 2e-59
Identities = 92/172 (53%), Positives = 111/172 (64%), Gaps = 35/172 (20%)
Frame = -2
Query: 646 ADTVESINKTLVEKGFSYNGKRFS------------VFRT*NHAHKTIH----------- 536
AD VE+I++TLV GFSY+GK + +F + K H
Sbjct: 992 ADKVEAISETLVRMGFSYDGKDYICSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGS 1051
Query: 535 -----------RRKSRDAGLQVGEMERDCLIA*GASMLIYERLMISGNPFEVQVCRACGL 389
K+R+ GL+VGEMERDCLIA GASML+YERLMIS +PFEVQVCR CGL
Sbjct: 1052 GPRVSLTRQPTEGKARNGGLRVGEMERDCLIAYGASMLLYERLMISSDPFEVQVCRVCGL 1111
Query: 388 SGYYNHKLKIGVC-S*KNYETMSKMKLPYACKLLFQELQSMNIVPRMKVSEA 236
GYYNHK+K G+C S KN + +S MKLPYACKLL QELQSMNIVPR+K++EA
Sbjct: 1112 LGYYNHKMKAGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1163
Score = 95.1 bits (235), Expect(2) = 2e-59
Identities = 44/56 (78%), Positives = 50/56 (89%), Gaps = 1/56 (1%)
Frame = -1
Query: 818 KGVCGTIVQKEDFPFSEQGICPDLVMNHHGFGNGMTMGKMIELL-GVTGLSCGRFH 654
KGVCGTIVQ+EDFPFSE+GICPDL+MN HGF + MT+GKMIELL G G+SCGRFH
Sbjct: 925 KGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFH 980
>ref|XP_007152964.1| hypothetical protein PHAVU_004G175000g [Phaseolus vulgaris]
gi|561026273|gb|ESW24958.1| hypothetical protein
PHAVU_004G175000g [Phaseolus vulgaris]
Length = 1161
Score = 162 bits (410), Expect(2) = 2e-59
Identities = 92/172 (53%), Positives = 112/172 (65%), Gaps = 35/172 (20%)
Frame = -2
Query: 646 ADTVESINKTLVEKGFSYNGKRFS------------VFRT*NHAHKTIH----------- 536
AD VE+I++TLV KGFSY+GK F +F + K H
Sbjct: 990 ADKVEAISETLVSKGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGS 1049
Query: 535 -----------RRKSRDAGLQVGEMERDCLIA*GASMLIYERLMISGNPFEVQVCRACGL 389
++R+ GL+VGEMERDCLIA GASMLIYERLM+S +PFEVQVC ACGL
Sbjct: 1050 GPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFEVQVCTACGL 1109
Query: 388 SGYYNHKLKIGVCS-*KNYETMSKMKLPYACKLLFQELQSMNIVPRMKVSEA 236
GYYNHKLK G+CS KN + +S MKLPYACKL+ QELQSMNIVPR+K+++A
Sbjct: 1110 LGYYNHKLKTGICSYCKNGDKISTMKLPYACKLMIQELQSMNIVPRLKLADA 1161
Score = 95.1 bits (235), Expect(2) = 2e-59
Identities = 44/56 (78%), Positives = 50/56 (89%), Gaps = 1/56 (1%)
Frame = -1
Query: 818 KGVCGTIVQKEDFPFSEQGICPDLVMNHHGFGNGMTMGKMIELL-GVTGLSCGRFH 654
KGVCGTIVQ+EDFPFSE+GICPDL+MN HGF + MT+GKMIELL G G+SCGRFH
Sbjct: 923 KGVCGTIVQQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFH 978
>ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arabidopsis lyrata subsp.
lyrata] gi|297309357|gb|EFH39781.1| hypothetical protein
ARALYDRAFT_917015 [Arabidopsis lyrata subsp. lyrata]
Length = 1165
Score = 163 bits (413), Expect(2) = 3e-59
Identities = 95/172 (55%), Positives = 112/172 (65%), Gaps = 35/172 (20%)
Frame = -2
Query: 646 ADTVESINKTLVEKGFSYNGKRFS------------VFRT*NHAHKTIH----------- 536
AD VE+I+KTLV+KGFSY+GK +F + K H
Sbjct: 994 ADKVETISKTLVDKGFSYSGKDLLYSGLSGEPLEAYIFMGPIYYQKLKHMVLDKMHARGS 1053
Query: 535 -----------RRKSRDAGLQVGEMERDCLIA*GASMLIYERLMISGNPFEVQVCRACGL 389
KS++ GL+VGEMERDCLIA GASMLIYERLMIS +PFEVQVCRACGL
Sbjct: 1054 GPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRACGL 1113
Query: 388 SGYYNHKLKIGVCS-*KNYETMSKMKLPYACKLLFQELQSMNIVPRMKVSEA 236
GYYN+KLK VCS KN + ++ MKLPYACKLLFQELQSMN+VPR+K+ EA
Sbjct: 1114 LGYYNYKLKKAVCSTCKNGDNIATMKLPYACKLLFQELQSMNVVPRLKLVEA 1165
Score = 93.6 bits (231), Expect(2) = 3e-59
Identities = 43/56 (76%), Positives = 49/56 (87%), Gaps = 1/56 (1%)
Frame = -1
Query: 818 KGVCGTIVQKEDFPFSEQGICPDLVMNHHGFGNGMTMGKMIELLG-VTGLSCGRFH 654
KGVCGTI+Q+EDFPFSE GICPDL+MN HGF + MT+GKMIELLG G+SCGRFH
Sbjct: 927 KGVCGTIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFH 982
>ref|XP_004249177.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Solanum
lycopersicum]
Length = 1149
Score = 166 bits (421), Expect(2) = 3e-59
Identities = 95/172 (55%), Positives = 113/172 (65%), Gaps = 35/172 (20%)
Frame = -2
Query: 646 ADTVESINKTLVEKGFSYNGKRFS------------VFRT*NHAHKTIH----------- 536
ADTV++I++TLV+ GF YNGK F +F + K H
Sbjct: 977 ADTVDAISETLVKHGFCYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVVDKMHARGS 1036
Query: 535 -----------RRKSRDAGLQVGEMERDCLIA*GASMLIYERLMISGNPFEVQVCRACGL 389
+SR+ GL+VGEMERDCLIA GASMLI+ERLM+S +PFE QVCR CGL
Sbjct: 1037 GPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIHERLMLSSDPFEAQVCRKCGL 1096
Query: 388 SGYYNHKLKIGVCS-*KNYETMSKMKLPYACKLLFQELQSMNIVPRMKVSEA 236
GYYN+KLKIG+CS KN E MS MKLPYACKLLFQELQSMNIVPR+K++EA
Sbjct: 1097 LGYYNYKLKIGICSMCKNGENMSTMKLPYACKLLFQELQSMNIVPRLKLTEA 1148
Score = 90.5 bits (223), Expect(2) = 3e-59
Identities = 42/56 (75%), Positives = 48/56 (85%), Gaps = 1/56 (1%)
Frame = -1
Query: 818 KGVCGTIVQKEDFPFSEQGICPDLVMNHHGFGNGMTMGKMIELLG-VTGLSCGRFH 654
KGVCG IVQ+ED PFSE+GICPDL+MN HGF + MT+GKMIELLG G+SCGRFH
Sbjct: 910 KGVCGIIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFH 965
>ref|XP_003627473.1| DNA-directed RNA polymerase III subunit RPC2 [Medicago truncatula]
gi|355521495|gb|AET01949.1| DNA-directed RNA polymerase
III subunit RPC2 [Medicago truncatula]
Length = 653
Score = 160 bits (406), Expect(2) = 1e-58
Identities = 92/172 (53%), Positives = 112/172 (65%), Gaps = 35/172 (20%)
Frame = -2
Query: 646 ADTVESINKTLVEKGFSYNGKRFS------------VFRT*NHAHKTIH----------- 536
AD VE+I+KTLV+ GF+Y+GK F +F + K H
Sbjct: 482 ADKVETISKTLVKHGFNYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGS 541
Query: 535 -----------RRKSRDAGLQVGEMERDCLIA*GASMLIYERLMISGNPFEVQVCRACGL 389
++R+ GL+VGEMERDCLIA GASMLI+ERLM+S +P+EVQVCRACGL
Sbjct: 542 GPKALITRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMLSSDPYEVQVCRACGL 601
Query: 388 SGYYNHKLKIGVC-S*KNYETMSKMKLPYACKLLFQELQSMNIVPRMKVSEA 236
GYYNHKLK GVC S KN + +S MKLPYACKLL QELQSMNIVPR+K+ +A
Sbjct: 602 LGYYNHKLKAGVCSSCKNGKQISTMKLPYACKLLIQELQSMNIVPRLKLEDA 653
Score = 94.4 bits (233), Expect(2) = 1e-58
Identities = 51/97 (52%), Positives = 64/97 (65%), Gaps = 16/97 (16%)
Frame = -1
Query: 896 GASFDKIALLFTKDAEVLV------ITQPGI---------LKGVCGTIVQKEDFPFSEQG 762
G DK+AL KD+ + + +P + KGVCGTIVQ+EDFPFSE+G
Sbjct: 374 GEVVDKVALCNDKDSNMCIKFLTRHTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSEKG 433
Query: 761 ICPDLVMNHHGFGNGMTMGKMIELL-GVTGLSCGRFH 654
ICPDL+MN HGF + MT+GKMIELL G G+SCG+FH
Sbjct: 434 ICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGKFH 470
>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus communis]
gi|223535120|gb|EEF36800.1| DNA-directed RNA polymerase
III subunit, putative [Ricinus communis]
Length = 1139
Score = 160 bits (404), Expect(2) = 2e-58
Identities = 91/172 (52%), Positives = 112/172 (65%), Gaps = 35/172 (20%)
Frame = -2
Query: 646 ADTVESINKTLVEKGFSYNGK------------RFSVFRT*NHAHKTIH----------- 536
ADTVE+I++TLV +GFSYNGK + +F + K H
Sbjct: 968 ADTVEAISETLVNRGFSYNGKDIIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGN 1027
Query: 535 -----------RRKSRDAGLQVGEMERDCLIA*GASMLIYERLMISGNPFEVQVCRACGL 389
++R+ GL+VGEMERDCLIA GASMLI+ERLMIS +PFEVQVCR CGL
Sbjct: 1028 GPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEVQVCRVCGL 1087
Query: 388 SGYYNHKLKIGVCS-*KNYETMSKMKLPYACKLLFQELQSMNIVPRMKVSEA 236
GY+N KL+ G+CS KN + +S MKLPYACKLL QELQSMNIVPR+K++EA
Sbjct: 1088 LGYFNQKLRAGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1139
Score = 94.7 bits (234), Expect(2) = 2e-58
Identities = 43/56 (76%), Positives = 50/56 (89%), Gaps = 1/56 (1%)
Frame = -1
Query: 818 KGVCGTIVQKEDFPFSEQGICPDLVMNHHGFGNGMTMGKMIELL-GVTGLSCGRFH 654
KGVCGTI+Q+EDFPFSE+GICPDL+MN HGF + MT+GKMIELL G G+SCGRFH
Sbjct: 901 KGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFH 956
>ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like isoform
X1 [Glycine max]
Length = 1166
Score = 161 bits (408), Expect(2) = 2e-58
Identities = 91/172 (52%), Positives = 112/172 (65%), Gaps = 35/172 (20%)
Frame = -2
Query: 646 ADTVESINKTLVEKGFSYNGKRFS------------VFRT*NHAHKTIH----------- 536
AD VE+I++TLV KGF+Y+GK F +F + K H
Sbjct: 995 ADKVETISETLVSKGFNYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGS 1054
Query: 535 -----------RRKSRDAGLQVGEMERDCLIA*GASMLIYERLMISGNPFEVQVCRACGL 389
++R+ GL+VGEMERDCLIA GASMLIYERLM+S +PFEVQVC ACGL
Sbjct: 1055 GPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFEVQVCTACGL 1114
Query: 388 SGYYNHKLKIGVC-S*KNYETMSKMKLPYACKLLFQELQSMNIVPRMKVSEA 236
GYYNHKLK G+C S KN + +S MKLPYACKL+ QELQSMNIVPR+K+++A
Sbjct: 1115 LGYYNHKLKTGICSSCKNGDNISTMKLPYACKLMIQELQSMNIVPRLKLADA 1166
Score = 92.8 bits (229), Expect(2) = 2e-58
Identities = 43/56 (76%), Positives = 49/56 (87%), Gaps = 1/56 (1%)
Frame = -1
Query: 818 KGVCGTIVQKEDFPFSEQGICPDLVMNHHGFGNGMTMGKMIELL-GVTGLSCGRFH 654
KGVCGTIV +EDFPFSE+GICPDL+MN HGF + MT+GKMIELL G G+SCGRFH
Sbjct: 928 KGVCGTIVPQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFH 983