BLASTX nr result

ID: Papaver27_contig00030916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00030916
         (694 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS47485.1| 60S ribosomal protein L5-1 [Triticum urartu]            63   8e-08
ref|XP_006645165.1| PREDICTED: 60S ribosomal protein L5-1-like i...    59   1e-06
ref|XP_006645164.1| PREDICTED: 60S ribosomal protein L5-1-like i...    59   1e-06

>gb|EMS47485.1| 60S ribosomal protein L5-1 [Triticum urartu]
          Length = 269

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 42/106 (39%), Positives = 62/106 (58%), Gaps = 9/106 (8%)
 Frame = -2

Query: 633 EGKTNKRAWICLINREKTKYKTSKYLFDDCL-TYKDIMQLQKYNT-----KKKVK---IG 481
           +GKT+ RA + L N++K KY T KY F   L +  D+++   Y T     ++ +K   + 
Sbjct: 25  QGKTDYRARLRLTNQDKNKYNTPKYRFVPYLFSSTDLIRHVAYCTGLLLARRVLKCRDLD 84

Query: 480 GKYEENIEASDEDYSVEPGKS*RSFCALPDVGNLQKTIGYCIFSAL 343
            +YE N+EA+ ED+SVEP    R F AL DVG ++ T G  +F AL
Sbjct: 85  QEYEGNVEATGEDFSVEPADERRPFRALLDVGLIRTTTGNRVFGAL 130


>ref|XP_006645165.1| PREDICTED: 60S ribosomal protein L5-1-like isoform X2 [Oryza
           brachyantha]
          Length = 303

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 47/138 (34%), Positives = 62/138 (44%), Gaps = 41/138 (29%)
 Frame = -2

Query: 633 EGKTNKRAWICLINREKTKYKTSKYLFDDCLTYKDIM--------------------QLQ 514
           +GKT+ RA I L N++K KY T KY F    T KDI                     +L 
Sbjct: 26  QGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITAQIVYATIAGDIVMAAAYSHELP 85

Query: 513 KYN------------------TKKKVKIGG---KYEENIEASDEDYSVEPGKS*RSFCAL 397
           +Y                    ++ +KI G   +YE N+EA+ EDY VEP    R F AL
Sbjct: 86  RYGLEAGLTNYAAAYCTGLLLARRVLKIRGLDQEYEGNVEATGEDYYVEPADERRPFRAL 145

Query: 396 PDVGNLQKTIGYCIFSAL 343
            DVG ++ T G  +F AL
Sbjct: 146 LDVGLIRTTTGNRVFGAL 163


>ref|XP_006645164.1| PREDICTED: 60S ribosomal protein L5-1-like isoform X1 [Oryza
           brachyantha]
          Length = 306

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 47/138 (34%), Positives = 62/138 (44%), Gaps = 41/138 (29%)
 Frame = -2

Query: 633 EGKTNKRAWICLINREKTKYKTSKYLFDDCLTYKDIM--------------------QLQ 514
           +GKT+ RA I L N++K KY T KY F    T KDI                     +L 
Sbjct: 29  QGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITAQIVYATIAGDIVMAAAYSHELP 88

Query: 513 KYN------------------TKKKVKIGG---KYEENIEASDEDYSVEPGKS*RSFCAL 397
           +Y                    ++ +KI G   +YE N+EA+ EDY VEP    R F AL
Sbjct: 89  RYGLEAGLTNYAAAYCTGLLLARRVLKIRGLDQEYEGNVEATGEDYYVEPADERRPFRAL 148

Query: 396 PDVGNLQKTIGYCIFSAL 343
            DVG ++ T G  +F AL
Sbjct: 149 LDVGLIRTTTGNRVFGAL 166


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