BLASTX nr result
ID: Papaver27_contig00030720
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00030720
(1025 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277700.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 134 2e-68
emb|CAN68264.1| hypothetical protein VITISV_002761 [Vitis vinifera] 133 4e-68
ref|XP_004491140.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 140 6e-68
ref|XP_003617006.1| Ubiquitin carboxyl-terminal hydrolase [Medic... 137 2e-67
gb|ABA98280.2| ubiquitin-specific protease 12, putative, express... 130 1e-62
gb|AAZ81950.1| putative ubiquitin protease [Oryza sativa Indica ... 130 2e-62
ref|XP_003577433.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 124 3e-61
ref|XP_002884872.1| hypothetical protein ARALYDRAFT_317971 [Arab... 130 1e-60
gb|AAF23207.1|AC016795_20 putative ubiquitin carboxyl-terminal h... 130 5e-60
ref|NP_187797.3| ubiquitin carboxyl-terminal hydrolase 13 [Arabi... 130 5e-60
ref|NP_001189864.1| ubiquitin carboxyl-terminal hydrolase 13 [Ar... 130 5e-60
ref|XP_006299059.1| hypothetical protein CARUB_v10015199mg [Caps... 126 6e-60
ref|XP_006289281.1| hypothetical protein CARUB_v10002750mg [Caps... 129 2e-59
ref|XP_007145378.1| hypothetical protein PHAVU_007G234000g [Phas... 120 2e-59
ref|XP_007145377.1| hypothetical protein PHAVU_007G234000g [Phas... 120 2e-59
ref|XP_002873269.1| ubiquitin-specific protease 12 [Arabidopsis ... 129 4e-59
dbj|BAB11409.1| ubiquitin carboxyl-terminal hydrolase [Arabidops... 129 8e-59
ref|NP_568171.1| ubiquitin carboxyl-terminal hydrolase 12 [Arabi... 129 8e-59
ref|NP_850783.1| ubiquitin carboxyl-terminal hydrolase 12 [Arabi... 129 8e-59
ref|XP_004979554.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 129 1e-58
>ref|XP_002277700.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Vitis vinifera]
gi|296084015|emb|CBI24403.3| unnamed protein product
[Vitis vinifera]
Length = 1116
Score = 134 bits (337), Expect(5) = 2e-68
Identities = 81/174 (46%), Positives = 93/174 (53%), Gaps = 56/174 (32%)
Frame = +1
Query: 124 LDDPAKIRLTPHNCYSQQPKSQAIKYRG-------------------------------- 207
LDDP+KIRLT HNCYSQQPK Q IKYRG
Sbjct: 839 LDDPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNLISDVLYYEVLDIPLPELQG 898
Query: 208 -KV*KL*RVLYHATNANTVVHSVRLPKQSTIGDVISYLKTKVEPSYPDTELRSLEVFYHK 384
K K+ +HA V HS+RLPKQST+GDVI+ LKTKVE S+P+ E+R LEVFYHK
Sbjct: 899 LKTLKV--AFHHAEKEEVVSHSIRLPKQSTVGDVINALKTKVELSHPNAEVRLLEVFYHK 956
Query: 385 IYKI-----------------------PEEKNLGLWDCLIHVYHFTNDASQSQM 477
IYK+ EEKNLG D LIHVYHFT D +Q+QM
Sbjct: 957 IYKVFPSNEKIENINDQYWTLRAEEIPEEEKNLGPQDRLIHVYHFTKDTAQNQM 1010
Score = 90.5 bits (223), Expect(5) = 2e-68
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +3
Query: 579 PTRNSLRWKFAFVSLGRPEYLQDSDIVARRFQRRDVYGAWEQYPSLEHSDSSWKRA 746
P +W+FAF+SLGRPEYLQDSDIV+ RFQRRDVYGAWEQY LEHSD++ KRA
Sbjct: 1043 PEEEFAKWRFAFLSLGRPEYLQDSDIVSSRFQRRDVYGAWEQYLGLEHSDTAPKRA 1098
Score = 58.2 bits (139), Expect(5) = 2e-68
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +2
Query: 485 VQNFGEPFLFTIHEREIIGEVKLRIQKKLQFPDEEFAK 598
+QNFGEPF IHE E + EVK+RIQKKL P+EEFAK
Sbjct: 1012 IQNFGEPFFLVIHEGETLAEVKVRIQKKLLVPEEEFAK 1049
Score = 35.0 bits (79), Expect(5) = 2e-68
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +3
Query: 63 SKVLTYDDVTERVARHIGLD 122
SK+ TYDDV ERVAR +GLD
Sbjct: 821 SKLFTYDDVVERVARQLGLD 840
Score = 31.6 bits (70), Expect(5) = 2e-68
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 2 VVHF*SLDKPEEDGFCPEL 58
VVHF SL+KP+ED FC E+
Sbjct: 802 VVHFRSLEKPKEDDFCLEM 820
>emb|CAN68264.1| hypothetical protein VITISV_002761 [Vitis vinifera]
Length = 510
Score = 133 bits (335), Expect(5) = 4e-68
Identities = 82/172 (47%), Positives = 93/172 (54%), Gaps = 54/172 (31%)
Frame = +1
Query: 124 LDDPAKIRLTPHNCYSQQPKSQAIKYRG---------KV*KL*RVLY------------- 237
LDDP+KIRLT HNCYSQQPK Q IKYRG + VLY
Sbjct: 233 LDDPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNLISDVLYYEVLDIPLPELQG 292
Query: 238 ---------HATNANTVVHSVRLPKQSTIGDVISYLKTKVEPSYPDTELRSLEVFYHKIY 390
HA V HS+RLPKQST+GDVI+ LKTKVE S+P+ E+R LEVFYHKIY
Sbjct: 293 LKXFESCFHHAEKEEVVSHSIRLPKQSTVGDVINALKTKVELSHPNAEVRLLEVFYHKIY 352
Query: 391 KI-----------------------PEEKNLGLWDCLIHVYHFTNDASQSQM 477
K+ EEKNLG D LIHVYHFT D +Q+QM
Sbjct: 353 KVFPSNEKIENINDQYWTLRAEEIPEEEKNLGPQDRLIHVYHFTKDTAQNQM 404
Score = 90.5 bits (223), Expect(5) = 4e-68
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +3
Query: 579 PTRNSLRWKFAFVSLGRPEYLQDSDIVARRFQRRDVYGAWEQYPSLEHSDSSWKRA 746
P +W+FAF+SLGRPEYLQDSDIV+ RFQRRDVYGAWEQY LEHSD++ KRA
Sbjct: 437 PEEEFAKWRFAFLSLGRPEYLQDSDIVSSRFQRRDVYGAWEQYLGLEHSDTAPKRA 492
Score = 58.2 bits (139), Expect(5) = 4e-68
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +2
Query: 485 VQNFGEPFLFTIHEREIIGEVKLRIQKKLQFPDEEFAK 598
+QNFGEPF IHE E + EVK+RIQKKL P+EEFAK
Sbjct: 406 IQNFGEPFFLVIHEGETLAEVKVRIQKKLLVPEEEFAK 443
Score = 35.0 bits (79), Expect(5) = 4e-68
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +3
Query: 63 SKVLTYDDVTERVARHIGLD 122
SK+ TYDDV ERVAR +GLD
Sbjct: 215 SKLFTYDDVVERVARQLGLD 234
Score = 31.6 bits (70), Expect(5) = 4e-68
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 2 VVHF*SLDKPEEDGFCPEL 58
VVHF SL+KP+ED FC E+
Sbjct: 196 VVHFRSLEKPKEDDFCLEM 214
>ref|XP_004491140.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 13-like [Cicer
arietinum]
Length = 1128
Score = 140 bits (352), Expect(5) = 6e-68
Identities = 83/174 (47%), Positives = 94/174 (54%), Gaps = 56/174 (32%)
Frame = +1
Query: 124 LDDPAKIRLTPHNCYSQQPKSQAIKYRG-------------------------------- 207
LDDP+KIRLTPHNCYSQQPK Q IKYRG
Sbjct: 851 LDDPSKIRLTPHNCYSQQPKPQPIKYRGLEHLSDMLVHYNQTSDILYYEVLDIPLPELQG 910
Query: 208 -KV*KL*RVLYHATNANTVVHSVRLPKQSTIGDVISYLKTKVEPSYPDTELRSLEVFYHK 384
K K+ +HAT V+H++RLPKQST+GDV+ LKTKVE S PD ELR LEVFYHK
Sbjct: 911 LKTLKV--AFHHATKDEVVIHTIRLPKQSTVGDVLDDLKTKVELSRPDAELRLLEVFYHK 968
Query: 385 IYKI-----------------------PEEKNLGLWDCLIHVYHFTNDASQSQM 477
IYK+ EEKNLG D LIHVYHFT D +Q+QM
Sbjct: 969 IYKVFPPNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFTKDTTQNQM 1022
Score = 84.7 bits (208), Expect(5) = 6e-68
Identities = 37/50 (74%), Positives = 45/50 (90%)
Frame = +3
Query: 597 RWKFAFVSLGRPEYLQDSDIVARRFQRRDVYGAWEQYPSLEHSDSSWKRA 746
+WKFAF SLGRPEYL+DSDIV+ RFQRR+VYGAWEQY LEH+D++ KR+
Sbjct: 1061 KWKFAFFSLGRPEYLEDSDIVSSRFQRREVYGAWEQYLGLEHTDNAPKRS 1110
Score = 58.2 bits (139), Expect(5) = 6e-68
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = +2
Query: 485 VQNFGEPFLFTIHEREIIGEVKLRIQKKLQFPDEEFAK 598
+QNFGEPF IHE E + E+K+RIQKKLQ PD+EF K
Sbjct: 1024 IQNFGEPFFLVIHECECLDEIKVRIQKKLQVPDDEFPK 1061
Score = 33.1 bits (74), Expect(5) = 6e-68
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 2 VVHF*SLDKPEEDGFCPEL 58
VVHF SLDKP+ED FC E+
Sbjct: 814 VVHFRSLDKPKEDDFCLEM 832
Score = 32.0 bits (71), Expect(5) = 6e-68
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 63 SKVLTYDDVTERVARHIGLD 122
S++ TYDDV ERVA+ +GLD
Sbjct: 833 SRLFTYDDVVERVAQKLGLD 852
>ref|XP_003617006.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355518341|gb|AES99964.1| Ubiquitin carboxyl-terminal
hydrolase [Medicago truncatula]
Length = 1123
Score = 137 bits (346), Expect(5) = 2e-67
Identities = 82/174 (47%), Positives = 93/174 (53%), Gaps = 56/174 (32%)
Frame = +1
Query: 124 LDDPAKIRLTPHNCYSQQPKSQAIKYRG-------------------------------- 207
LDDP+KIRLTPHNCYSQQPK Q IKYRG
Sbjct: 846 LDDPSKIRLTPHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPELQG 905
Query: 208 -KV*KL*RVLYHATNANTVVHSVRLPKQSTIGDVISYLKTKVEPSYPDTELRSLEVFYHK 384
K K+ +HAT V+H++RLPKQST+GDV+ LK KVE S PD ELR LEVFYHK
Sbjct: 906 LKTLKV--AFHHATKDEVVIHTIRLPKQSTVGDVLEDLKKKVELSRPDAELRLLEVFYHK 963
Query: 385 IYKI-----------------------PEEKNLGLWDCLIHVYHFTNDASQSQM 477
IYK+ EEKNLG D LIHVYHFT D +Q+QM
Sbjct: 964 IYKVFPPNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFTKDTTQNQM 1017
Score = 84.7 bits (208), Expect(5) = 2e-67
Identities = 36/50 (72%), Positives = 45/50 (90%)
Frame = +3
Query: 597 RWKFAFVSLGRPEYLQDSDIVARRFQRRDVYGAWEQYPSLEHSDSSWKRA 746
+WKFAF SLGRPEYL+DS++V+ RFQRRDVYGAWEQY LEH+D++ KR+
Sbjct: 1056 KWKFAFFSLGRPEYLEDSEVVSNRFQRRDVYGAWEQYLGLEHTDNAPKRS 1105
Score = 58.9 bits (141), Expect(5) = 2e-67
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = +2
Query: 485 VQNFGEPFLFTIHEREIIGEVKLRIQKKLQFPDEEFAK 598
+QNFGEPF IHE E + E++LRIQKKLQ PD+EF K
Sbjct: 1019 IQNFGEPFFLVIHECETLAEIRLRIQKKLQVPDDEFGK 1056
Score = 33.1 bits (74), Expect(5) = 2e-67
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 2 VVHF*SLDKPEEDGFCPEL 58
VVHF SLDKP+ED FC E+
Sbjct: 809 VVHFRSLDKPKEDDFCLEM 827
Score = 32.0 bits (71), Expect(5) = 2e-67
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 63 SKVLTYDDVTERVARHIGLD 122
S++ TYDDV ERVA +GLD
Sbjct: 828 SRLFTYDDVVERVAEQLGLD 847
>gb|ABA98280.2| ubiquitin-specific protease 12, putative, expressed [Oryza sativa
Japonica Group]
Length = 1125
Score = 130 bits (328), Expect(5) = 1e-62
Identities = 81/175 (46%), Positives = 91/175 (52%), Gaps = 56/175 (32%)
Frame = +1
Query: 124 LDDPAKIRLTPHNCYSQQPKSQAIKYRG-------------------------------- 207
LDDP+KIRLT HNCYSQQPK Q I+YRG
Sbjct: 849 LDDPSKIRLTSHNCYSQQPKPQPIRYRGVEHLLDMLVHYNQTSDILYYEVLDIPLPELQC 908
Query: 208 -KV*KL*RVLYHATNANTVVHSVRLPKQSTIGDVISYLKTKVEPSYPDTELRSLEVFYHK 384
K K+ +HAT V+HS+RLPK STI DVI+ LKTKVE S PD ELR LEVFYHK
Sbjct: 909 LKTLKV--AFHHATKDEVVIHSIRLPKNSTISDVITDLKTKVELSNPDAELRLLEVFYHK 966
Query: 385 IYKI-----------------------PEEKNLGLWDCLIHVYHFTNDASQSQML 480
IYKI EEKNLG D LIHVYHF D +Q+Q +
Sbjct: 967 IYKIFPPHEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFMKDPNQNQQI 1021
Score = 81.6 bits (200), Expect(5) = 1e-62
Identities = 35/56 (62%), Positives = 44/56 (78%)
Frame = +3
Query: 579 PTRNSLRWKFAFVSLGRPEYLQDSDIVARRFQRRDVYGAWEQYPSLEHSDSSWKRA 746
P +WK AF+S+ RPEYLQD D+V+ RFQRRDVYGAWEQY LEH+D++ KR+
Sbjct: 1052 PDEEFSKWKLAFISMNRPEYLQDVDVVSARFQRRDVYGAWEQYLGLEHTDTTPKRS 1107
Score = 51.2 bits (121), Expect(5) = 1e-62
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = +2
Query: 485 VQNFGEPFLFTIHEREIIGEVKLRIQKKLQFPDEEFAK 598
+QNFG+PFL I E E E+ RIQKKL+ PDEEF+K
Sbjct: 1021 IQNFGDPFLLVIREGETAAEILERIQKKLRVPDEEFSK 1058
Score = 33.9 bits (76), Expect(5) = 1e-62
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +3
Query: 63 SKVLTYDDVTERVARHIGLD 122
SK+ TYDDV ERVAR +GLD
Sbjct: 831 SKLHTYDDVVERVARQLGLD 850
Score = 32.3 bits (72), Expect(5) = 1e-62
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 2 VVHF*SLDKPEEDGFCPEL 58
VVHF SL+KP+ED FC EL
Sbjct: 812 VVHFRSLEKPKEDDFCLEL 830
>gb|AAZ81950.1| putative ubiquitin protease [Oryza sativa Indica Group]
Length = 350
Score = 130 bits (328), Expect(5) = 2e-62
Identities = 81/175 (46%), Positives = 91/175 (52%), Gaps = 56/175 (32%)
Frame = +1
Query: 124 LDDPAKIRLTPHNCYSQQPKSQAIKYRG-------------------------------- 207
LDDP+KIRLT HNCYSQQPK Q I+YRG
Sbjct: 74 LDDPSKIRLTSHNCYSQQPKPQPIRYRGVEHLLDMLVHYNQTSDILYYEVLDIPLPELQC 133
Query: 208 -KV*KL*RVLYHATNANTVVHSVRLPKQSTIGDVISYLKTKVEPSYPDTELRSLEVFYHK 384
K K+ +HAT V+HS+RLPK STI DVI+ LKTKVE S PD ELR LEVFYHK
Sbjct: 134 LKTLKV--AFHHATKDEVVIHSIRLPKNSTISDVITDLKTKVELSNPDAELRLLEVFYHK 191
Query: 385 IYKI-----------------------PEEKNLGLWDCLIHVYHFTNDASQSQML 480
IYKI EEKNLG D LIHVYHF D +Q+Q +
Sbjct: 192 IYKIFPPHEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFMKDPNQNQQI 246
Score = 81.6 bits (200), Expect(5) = 2e-62
Identities = 35/56 (62%), Positives = 44/56 (78%)
Frame = +3
Query: 579 PTRNSLRWKFAFVSLGRPEYLQDSDIVARRFQRRDVYGAWEQYPSLEHSDSSWKRA 746
P +WK AF+S+ RPEYLQD D+V+ RFQRRDVYGAWEQY LEH+D++ KR+
Sbjct: 277 PDEEFSKWKLAFISMNRPEYLQDVDVVSARFQRRDVYGAWEQYLGLEHTDTTPKRS 332
Score = 51.2 bits (121), Expect(5) = 2e-62
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = +2
Query: 485 VQNFGEPFLFTIHEREIIGEVKLRIQKKLQFPDEEFAK 598
+QNFG+PFL I E E E+ RIQKKL+ PDEEF+K
Sbjct: 246 IQNFGDPFLLVIREGETAAEILERIQKKLRVPDEEFSK 283
Score = 33.9 bits (76), Expect(5) = 2e-62
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +3
Query: 63 SKVLTYDDVTERVARHIGLD 122
SK+ TYDDV ERVAR +GLD
Sbjct: 56 SKLHTYDDVVERVARQLGLD 75
Score = 32.3 bits (72), Expect(5) = 2e-62
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 2 VVHF*SLDKPEEDGFCPEL 58
VVHF SL+KP+ED FC EL
Sbjct: 37 VVHFRSLEKPKEDDFCLEL 55
>ref|XP_003577433.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
[Brachypodium distachyon]
Length = 1118
Score = 124 bits (310), Expect(5) = 3e-61
Identities = 79/172 (45%), Positives = 89/172 (51%), Gaps = 54/172 (31%)
Frame = +1
Query: 124 LDDPAKIRLTPHNCYSQQPKSQAIKYRG------------------------------KV 213
LDDPAKIRLT HNCYSQQPK Q I+YRG +
Sbjct: 843 LDDPAKIRLTSHNCYSQQPKPQPIRYRGVEHLLDMLIHYNQTSDILYYEVLDIPLPELQF 902
Query: 214 *KL*RVLYH-ATNANTVVHSVRLPKQSTIGDVISYLKTKVEPSYPDTELRSLEVFYHKIY 390
K +V +H AT V+HS+RLPK STI DVI+ LKTKV+ S P ELR LEVFYHKIY
Sbjct: 903 LKTLKVAFHSATKDEVVIHSIRLPKNSTIADVINDLKTKVDLSSPSAELRLLEVFYHKIY 962
Query: 391 KI-----------------------PEEKNLGLWDCLIHVYHFTNDASQSQM 477
KI EEKN D LIHVYHFT D Q+Q+
Sbjct: 963 KIFPLHEKIENINDQYWTLRAEEIPEEEKNPSPHDRLIHVYHFTKDPLQNQI 1014
Score = 84.7 bits (208), Expect(5) = 3e-61
Identities = 36/50 (72%), Positives = 45/50 (90%)
Frame = +3
Query: 597 RWKFAFVSLGRPEYLQDSDIVARRFQRRDVYGAWEQYPSLEHSDSSWKRA 746
+WKFAFVS+ RP+YL+DSD+V+ RFQRRDVYGAWEQY LEH+D++ KRA
Sbjct: 1051 KWKFAFVSMNRPDYLEDSDVVSARFQRRDVYGAWEQYLGLEHTDTAPKRA 1100
Score = 51.6 bits (122), Expect(5) = 3e-61
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = +2
Query: 485 VQNFGEPFLFTIHEREIIGEVKLRIQKKLQFPDEEFAK 598
+QNFG+PF IHE E + +VK RI++KLQ DEEF+K
Sbjct: 1014 IQNFGDPFFLAIHEGETLAQVKERIKRKLQVADEEFSK 1051
Score = 33.9 bits (76), Expect(5) = 3e-61
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +3
Query: 63 SKVLTYDDVTERVARHIGLD 122
SK+ TYDDV ERVAR +GLD
Sbjct: 825 SKLHTYDDVVERVARQLGLD 844
Score = 31.2 bits (69), Expect(5) = 3e-61
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 2 VVHF*SLDKPEEDGFCPEL 58
VVHF SL+KP++D FC EL
Sbjct: 806 VVHFRSLEKPKDDDFCLEL 824
>ref|XP_002884872.1| hypothetical protein ARALYDRAFT_317971 [Arabidopsis lyrata subsp.
lyrata] gi|297330712|gb|EFH61131.1| hypothetical protein
ARALYDRAFT_317971 [Arabidopsis lyrata subsp. lyrata]
Length = 1115
Score = 130 bits (326), Expect(5) = 1e-60
Identities = 78/173 (45%), Positives = 95/173 (54%), Gaps = 54/173 (31%)
Frame = +1
Query: 124 LDDPAKIRLTPHNCYSQQPKSQAIKYRG------------------------------KV 213
LDDP+K+RLT HNCYSQQPK Q IKYRG +
Sbjct: 839 LDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQG 898
Query: 214 *KL*RVLYH-ATNANTVVHSVRLPKQSTIGDVISYLKTKVEPSYPDTELRSLEVFYHKIY 390
K +V +H AT ++H++RLPKQST+GDVI+ LKTKVE S+ D ELR LEVF+HKIY
Sbjct: 899 LKTLKVAFHSATKDEVIIHNIRLPKQSTVGDVINELKTKVELSHQDAELRLLEVFFHKIY 958
Query: 391 KI-----------------------PEEKNLGLWDCLIHVYHFTNDASQSQML 480
KI EEKN+G D LIHVYHFT +A Q+Q +
Sbjct: 959 KIFPSTERIENINDQYWTLRAEEIPDEEKNIGPNDRLIHVYHFTKEAGQNQQV 1011
Score = 82.4 bits (202), Expect(5) = 1e-60
Identities = 37/56 (66%), Positives = 44/56 (78%)
Frame = +3
Query: 579 PTRNSLRWKFAFVSLGRPEYLQDSDIVARRFQRRDVYGAWEQYPSLEHSDSSWKRA 746
P + +WKFA SLGRP+YLQD+D+V RFQRRDVYGAWEQY LEH D++ KRA
Sbjct: 1042 PDEDFAKWKFASFSLGRPDYLQDTDVVYNRFQRRDVYGAWEQYLGLEHIDNAPKRA 1097
Score = 57.8 bits (138), Expect(5) = 1e-60
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = +2
Query: 485 VQNFGEPFLFTIHEREIIGEVKLRIQKKLQFPDEEFAK 598
VQNFGEPF IHE E + E+K RIQKKL PDE+FAK
Sbjct: 1011 VQNFGEPFFLVIHEGETLEEIKTRIQKKLHVPDEDFAK 1048
Score = 30.4 bits (67), Expect(5) = 1e-60
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +3
Query: 63 SKVLTYDDVTERVARHIGLD 122
SK TYDDV ERVA +GLD
Sbjct: 821 SKQHTYDDVVERVAEKLGLD 840
Score = 23.1 bits (48), Expect(5) = 1e-60
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 2 VVHF*SLDKPEEDGFCPEL 58
+V F +L+KP+ED F EL
Sbjct: 802 LVRFRTLEKPKEDEFTMEL 820
>gb|AAF23207.1|AC016795_20 putative ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana]
Length = 1124
Score = 130 bits (326), Expect(5) = 5e-60
Identities = 78/173 (45%), Positives = 95/173 (54%), Gaps = 54/173 (31%)
Frame = +1
Query: 124 LDDPAKIRLTPHNCYSQQPKSQAIKYRG------------------------------KV 213
LDDP+K+RLT HNCYSQQPK Q IKYRG +
Sbjct: 848 LDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQG 907
Query: 214 *KL*RVLYH-ATNANTVVHSVRLPKQSTIGDVISYLKTKVEPSYPDTELRSLEVFYHKIY 390
K +V +H AT ++H++RLPKQST+GDVI+ LKTKVE S+ D ELR LEVF+HKIY
Sbjct: 908 LKTLKVAFHSATKDEVIIHNIRLPKQSTVGDVINELKTKVELSHQDAELRLLEVFFHKIY 967
Query: 391 KI-----------------------PEEKNLGLWDCLIHVYHFTNDASQSQML 480
KI EEKN+G D LIHVYHFT +A Q+Q +
Sbjct: 968 KIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLIHVYHFTKEAGQNQQV 1020
Score = 79.0 bits (193), Expect(5) = 5e-60
Identities = 35/56 (62%), Positives = 43/56 (76%)
Frame = +3
Query: 579 PTRNSLRWKFAFVSLGRPEYLQDSDIVARRFQRRDVYGAWEQYPSLEHSDSSWKRA 746
P + +WKFA S+GRP+YL D+D+V RFQRRDVYGAWEQY LEH D++ KRA
Sbjct: 1051 PDEDFAKWKFASFSMGRPDYLLDTDVVYNRFQRRDVYGAWEQYLGLEHIDNAPKRA 1106
Score = 57.8 bits (138), Expect(5) = 5e-60
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = +2
Query: 485 VQNFGEPFLFTIHEREIIGEVKLRIQKKLQFPDEEFAK 598
VQNFGEPF IHE E + E+K RIQKKL PDE+FAK
Sbjct: 1020 VQNFGEPFFLVIHEGETLEEIKTRIQKKLHVPDEDFAK 1057
Score = 31.6 bits (70), Expect(5) = 5e-60
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 63 SKVLTYDDVTERVARHIGLD 122
SK+ TYDDV ERVA +GLD
Sbjct: 830 SKLHTYDDVVERVAEKLGLD 849
Score = 23.1 bits (48), Expect(5) = 5e-60
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 2 VVHF*SLDKPEEDGFCPEL 58
+V F +L+KP+ED F EL
Sbjct: 811 LVRFRTLEKPKEDEFTMEL 829
>ref|NP_187797.3| ubiquitin carboxyl-terminal hydrolase 13 [Arabidopsis thaliana]
gi|75243459|sp|Q84WU2.1|UBP13_ARATH RecName:
Full=Ubiquitin carboxyl-terminal hydrolase 13; AltName:
Full=Deubiquitinating enzyme 13; Short=AtUBP13; AltName:
Full=Ubiquitin thioesterase 13; AltName:
Full=Ubiquitin-specific-processing protease 13
gi|27754270|gb|AAO22588.1| putative ubiquitin
carboxyl-terminal hydrolase [Arabidopsis thaliana]
gi|332641595|gb|AEE75116.1| ubiquitin carboxyl-terminal
hydrolase 13 [Arabidopsis thaliana]
Length = 1115
Score = 130 bits (326), Expect(5) = 5e-60
Identities = 78/173 (45%), Positives = 95/173 (54%), Gaps = 54/173 (31%)
Frame = +1
Query: 124 LDDPAKIRLTPHNCYSQQPKSQAIKYRG------------------------------KV 213
LDDP+K+RLT HNCYSQQPK Q IKYRG +
Sbjct: 839 LDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQG 898
Query: 214 *KL*RVLYH-ATNANTVVHSVRLPKQSTIGDVISYLKTKVEPSYPDTELRSLEVFYHKIY 390
K +V +H AT ++H++RLPKQST+GDVI+ LKTKVE S+ D ELR LEVF+HKIY
Sbjct: 899 LKTLKVAFHSATKDEVIIHNIRLPKQSTVGDVINELKTKVELSHQDAELRLLEVFFHKIY 958
Query: 391 KI-----------------------PEEKNLGLWDCLIHVYHFTNDASQSQML 480
KI EEKN+G D LIHVYHFT +A Q+Q +
Sbjct: 959 KIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLIHVYHFTKEAGQNQQV 1011
Score = 79.0 bits (193), Expect(5) = 5e-60
Identities = 35/56 (62%), Positives = 43/56 (76%)
Frame = +3
Query: 579 PTRNSLRWKFAFVSLGRPEYLQDSDIVARRFQRRDVYGAWEQYPSLEHSDSSWKRA 746
P + +WKFA S+GRP+YL D+D+V RFQRRDVYGAWEQY LEH D++ KRA
Sbjct: 1042 PDEDFAKWKFASFSMGRPDYLLDTDVVYNRFQRRDVYGAWEQYLGLEHIDNAPKRA 1097
Score = 57.8 bits (138), Expect(5) = 5e-60
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = +2
Query: 485 VQNFGEPFLFTIHEREIIGEVKLRIQKKLQFPDEEFAK 598
VQNFGEPF IHE E + E+K RIQKKL PDE+FAK
Sbjct: 1011 VQNFGEPFFLVIHEGETLEEIKTRIQKKLHVPDEDFAK 1048
Score = 31.6 bits (70), Expect(5) = 5e-60
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 63 SKVLTYDDVTERVARHIGLD 122
SK+ TYDDV ERVA +GLD
Sbjct: 821 SKLHTYDDVVERVAEKLGLD 840
Score = 23.1 bits (48), Expect(5) = 5e-60
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 2 VVHF*SLDKPEEDGFCPEL 58
+V F +L+KP+ED F EL
Sbjct: 802 LVRFRTLEKPKEDEFTMEL 820
>ref|NP_001189864.1| ubiquitin carboxyl-terminal hydrolase 13 [Arabidopsis thaliana]
gi|332641596|gb|AEE75117.1| ubiquitin carboxyl-terminal
hydrolase 13 [Arabidopsis thaliana]
Length = 1114
Score = 130 bits (326), Expect(5) = 5e-60
Identities = 78/173 (45%), Positives = 95/173 (54%), Gaps = 54/173 (31%)
Frame = +1
Query: 124 LDDPAKIRLTPHNCYSQQPKSQAIKYRG------------------------------KV 213
LDDP+K+RLT HNCYSQQPK Q IKYRG +
Sbjct: 838 LDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQG 897
Query: 214 *KL*RVLYH-ATNANTVVHSVRLPKQSTIGDVISYLKTKVEPSYPDTELRSLEVFYHKIY 390
K +V +H AT ++H++RLPKQST+GDVI+ LKTKVE S+ D ELR LEVF+HKIY
Sbjct: 898 LKTLKVAFHSATKDEVIIHNIRLPKQSTVGDVINELKTKVELSHQDAELRLLEVFFHKIY 957
Query: 391 KI-----------------------PEEKNLGLWDCLIHVYHFTNDASQSQML 480
KI EEKN+G D LIHVYHFT +A Q+Q +
Sbjct: 958 KIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLIHVYHFTKEAGQNQQV 1010
Score = 79.0 bits (193), Expect(5) = 5e-60
Identities = 35/56 (62%), Positives = 43/56 (76%)
Frame = +3
Query: 579 PTRNSLRWKFAFVSLGRPEYLQDSDIVARRFQRRDVYGAWEQYPSLEHSDSSWKRA 746
P + +WKFA S+GRP+YL D+D+V RFQRRDVYGAWEQY LEH D++ KRA
Sbjct: 1041 PDEDFAKWKFASFSMGRPDYLLDTDVVYNRFQRRDVYGAWEQYLGLEHIDNAPKRA 1096
Score = 57.8 bits (138), Expect(5) = 5e-60
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = +2
Query: 485 VQNFGEPFLFTIHEREIIGEVKLRIQKKLQFPDEEFAK 598
VQNFGEPF IHE E + E+K RIQKKL PDE+FAK
Sbjct: 1010 VQNFGEPFFLVIHEGETLEEIKTRIQKKLHVPDEDFAK 1047
Score = 31.6 bits (70), Expect(5) = 5e-60
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 63 SKVLTYDDVTERVARHIGLD 122
SK+ TYDDV ERVA +GLD
Sbjct: 820 SKLHTYDDVVERVAEKLGLD 839
Score = 23.1 bits (48), Expect(5) = 5e-60
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 2 VVHF*SLDKPEEDGFCPEL 58
+V F +L+KP+ED F EL
Sbjct: 801 LVRFRTLEKPKEDEFTMEL 819
>ref|XP_006299059.1| hypothetical protein CARUB_v10015199mg [Capsella rubella]
gi|482567768|gb|EOA31957.1| hypothetical protein
CARUB_v10015199mg [Capsella rubella]
Length = 1115
Score = 126 bits (316), Expect(5) = 6e-60
Identities = 77/173 (44%), Positives = 93/173 (53%), Gaps = 54/173 (31%)
Frame = +1
Query: 124 LDDPAKIRLTPHNCYSQQPKSQAIKYRG------------------------------KV 213
LDDP+K+RLT HNCYSQQPK Q IKYRG +
Sbjct: 839 LDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQG 898
Query: 214 *KL*RVLYH-ATNANTVVHSVRLPKQSTIGDVISYLKTKVEPSYPDTELRSLEVFYHKIY 390
K +V +H A V+H++RLPKQST+GDVI+ LKTKVE S+ D ELR LEVF+HKIY
Sbjct: 899 LKTLKVAFHSAIKDEVVIHNIRLPKQSTVGDVINELKTKVELSHKDAELRLLEVFFHKIY 958
Query: 391 KI-----------------------PEEKNLGLWDCLIHVYHFTNDASQSQML 480
KI EEKN+G D LIHVYHFT + Q+Q +
Sbjct: 959 KIFPSTERIENINDQYWTLRAEEIPDEEKNIGPNDRLIHVYHFTKEPGQNQQV 1011
Score = 82.8 bits (203), Expect(5) = 6e-60
Identities = 37/56 (66%), Positives = 44/56 (78%)
Frame = +3
Query: 579 PTRNSLRWKFAFVSLGRPEYLQDSDIVARRFQRRDVYGAWEQYPSLEHSDSSWKRA 746
P + +WKFA S+GRP+YLQDSD+V RFQRRDVYGAWEQY LEH D++ KRA
Sbjct: 1042 PDEDFAKWKFASFSMGRPDYLQDSDVVYNRFQRRDVYGAWEQYLGLEHIDNAPKRA 1097
Score = 57.8 bits (138), Expect(5) = 6e-60
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = +2
Query: 485 VQNFGEPFLFTIHEREIIGEVKLRIQKKLQFPDEEFAK 598
VQNFGEPF IHE E + E+K RIQKKL PDE+FAK
Sbjct: 1011 VQNFGEPFFLVIHEGETLEEIKTRIQKKLHVPDEDFAK 1048
Score = 31.6 bits (70), Expect(5) = 6e-60
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 63 SKVLTYDDVTERVARHIGLD 122
SK+ TYDDV ERVA +GLD
Sbjct: 821 SKLHTYDDVVERVAEKLGLD 840
Score = 22.7 bits (47), Expect(5) = 6e-60
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 2 VVHF*SLDKPEEDGFCPEL 58
+V F +L+KP+ED F EL
Sbjct: 802 LVRFRTLEKPKEDEFILEL 820
>ref|XP_006289281.1| hypothetical protein CARUB_v10002750mg [Capsella rubella]
gi|482557987|gb|EOA22179.1| hypothetical protein
CARUB_v10002750mg [Capsella rubella]
Length = 1115
Score = 129 bits (323), Expect(5) = 2e-59
Identities = 78/175 (44%), Positives = 92/175 (52%), Gaps = 56/175 (32%)
Frame = +1
Query: 124 LDDPAKIRLTPHNCYSQQPKSQAIKYRG-------------------------------- 207
LDDP+K+RLT HNCYSQQPK Q IKYRG
Sbjct: 839 LDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQG 898
Query: 208 -KV*KL*RVLYHATNANTVVHSVRLPKQSTIGDVISYLKTKVEPSYPDTELRSLEVFYHK 384
K K+ +HAT V+H++RLPKQST+GDVI+ LKTKVE S+PD ELR LEVFYHK
Sbjct: 899 LKTLKV--AFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRLLEVFYHK 956
Query: 385 IYKI-----------------------PEEKNLGLWDCLIHVYHFTNDASQSQML 480
IYKI EEKN+G D LI VYHF + Q+Q +
Sbjct: 957 IYKIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQQV 1011
Score = 82.4 bits (202), Expect(5) = 2e-59
Identities = 36/50 (72%), Positives = 45/50 (90%)
Frame = +3
Query: 597 RWKFAFVSLGRPEYLQDSDIVARRFQRRDVYGAWEQYPSLEHSDSSWKRA 746
+WKFAF+S+GRPEYLQD+D+V RFQRRDVYGA+EQY LEH+D++ KRA
Sbjct: 1048 KWKFAFMSMGRPEYLQDTDVVYNRFQRRDVYGAFEQYLGLEHADTTPKRA 1097
Score = 53.9 bits (128), Expect(5) = 2e-59
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = +2
Query: 485 VQNFGEPFLFTIHEREIIGEVKLRIQKKLQFPDEEFAK 598
VQNFGEPF IHE E + E+K RIQKKL DE+FAK
Sbjct: 1011 VQNFGEPFFLVIHEGETLEEIKNRIQKKLHVSDEDFAK 1048
Score = 31.6 bits (70), Expect(5) = 2e-59
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 63 SKVLTYDDVTERVARHIGLD 122
SK+ TYDDV ERVA +GLD
Sbjct: 821 SKLHTYDDVVERVAEKLGLD 840
Score = 22.7 bits (47), Expect(5) = 2e-59
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 2 VVHF*SLDKPEEDGFCPEL 58
+V F +L+KP+ED F EL
Sbjct: 802 LVRFRALEKPKEDEFVLEL 820
>ref|XP_007145378.1| hypothetical protein PHAVU_007G234000g [Phaseolus vulgaris]
gi|561018568|gb|ESW17372.1| hypothetical protein
PHAVU_007G234000g [Phaseolus vulgaris]
Length = 1122
Score = 120 bits (302), Expect(5) = 2e-59
Identities = 74/175 (42%), Positives = 90/175 (51%), Gaps = 56/175 (32%)
Frame = +1
Query: 124 LDDPAKIRLTPHNCYSQQPKSQAIKYRG-------------------------------- 207
L+DP+KIRLT HNCYSQQPK Q+IKYRG
Sbjct: 846 LNDPSKIRLTCHNCYSQQPKPQSIKYRGIEHLSDMLIHYNQASDILYYEVLDIPLPELQC 905
Query: 208 -KV*KL*RVLYHATNANTVVHSVRLPKQSTIGDVISYLKTKVEPSYPDTELRSLEVFYHK 384
K K+ +HAT V+H++RLPK + DVI+ LK+KV+ S+PD ELR LEVFYHK
Sbjct: 906 LKTLKI--AFHHATKDEVVIHTIRLPKHCIVADVINDLKSKVDLSHPDAELRLLEVFYHK 963
Query: 385 IYKI-----------------------PEEKNLGLWDCLIHVYHFTNDASQSQML 480
IYKI EEKNLG LIHVYHF D +Q+Q +
Sbjct: 964 IYKIFHINERIENINDQYWTLRAEEIPEEEKNLGPHHRLIHVYHFLKDTNQNQQV 1018
Score = 86.3 bits (212), Expect(5) = 2e-59
Identities = 37/58 (63%), Positives = 47/58 (81%)
Frame = +3
Query: 579 PTRNSLRWKFAFVSLGRPEYLQDSDIVARRFQRRDVYGAWEQYPSLEHSDSSWKRAES 752
P +W+FAF+S GRPEYLQDSDIV+ RFQRRD+YGAWEQY LEH+D++ KR+ +
Sbjct: 1049 PDEEFSKWRFAFLSFGRPEYLQDSDIVSTRFQRRDIYGAWEQYLGLEHTDNTPKRSNA 1106
Score = 58.9 bits (141), Expect(5) = 2e-59
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = +2
Query: 485 VQNFGEPFLFTIHEREIIGEVKLRIQKKLQFPDEEFAK 598
VQNFG PF IHE E + EVKLRIQ KLQ PDEEF+K
Sbjct: 1018 VQNFGHPFFLVIHEGETLAEVKLRIQSKLQVPDEEFSK 1055
Score = 30.0 bits (66), Expect(5) = 2e-59
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 63 SKVLTYDDVTERVARHIGLD 122
SK+ TYD+V E VA+HIGL+
Sbjct: 828 SKLDTYDNVVEEVAQHIGLN 847
Score = 23.1 bits (48), Expect(5) = 2e-59
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 2 VVHF*SLDKPEEDGFCPEL 58
VV F L+KP+ED F EL
Sbjct: 809 VVRFRILEKPKEDDFSLEL 827
>ref|XP_007145377.1| hypothetical protein PHAVU_007G234000g [Phaseolus vulgaris]
gi|561018567|gb|ESW17371.1| hypothetical protein
PHAVU_007G234000g [Phaseolus vulgaris]
Length = 1073
Score = 120 bits (302), Expect(5) = 2e-59
Identities = 74/175 (42%), Positives = 90/175 (51%), Gaps = 56/175 (32%)
Frame = +1
Query: 124 LDDPAKIRLTPHNCYSQQPKSQAIKYRG-------------------------------- 207
L+DP+KIRLT HNCYSQQPK Q+IKYRG
Sbjct: 797 LNDPSKIRLTCHNCYSQQPKPQSIKYRGIEHLSDMLIHYNQASDILYYEVLDIPLPELQC 856
Query: 208 -KV*KL*RVLYHATNANTVVHSVRLPKQSTIGDVISYLKTKVEPSYPDTELRSLEVFYHK 384
K K+ +HAT V+H++RLPK + DVI+ LK+KV+ S+PD ELR LEVFYHK
Sbjct: 857 LKTLKI--AFHHATKDEVVIHTIRLPKHCIVADVINDLKSKVDLSHPDAELRLLEVFYHK 914
Query: 385 IYKI-----------------------PEEKNLGLWDCLIHVYHFTNDASQSQML 480
IYKI EEKNLG LIHVYHF D +Q+Q +
Sbjct: 915 IYKIFHINERIENINDQYWTLRAEEIPEEEKNLGPHHRLIHVYHFLKDTNQNQQV 969
Score = 86.3 bits (212), Expect(5) = 2e-59
Identities = 37/58 (63%), Positives = 47/58 (81%)
Frame = +3
Query: 579 PTRNSLRWKFAFVSLGRPEYLQDSDIVARRFQRRDVYGAWEQYPSLEHSDSSWKRAES 752
P +W+FAF+S GRPEYLQDSDIV+ RFQRRD+YGAWEQY LEH+D++ KR+ +
Sbjct: 1000 PDEEFSKWRFAFLSFGRPEYLQDSDIVSTRFQRRDIYGAWEQYLGLEHTDNTPKRSNA 1057
Score = 58.9 bits (141), Expect(5) = 2e-59
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = +2
Query: 485 VQNFGEPFLFTIHEREIIGEVKLRIQKKLQFPDEEFAK 598
VQNFG PF IHE E + EVKLRIQ KLQ PDEEF+K
Sbjct: 969 VQNFGHPFFLVIHEGETLAEVKLRIQSKLQVPDEEFSK 1006
Score = 30.0 bits (66), Expect(5) = 2e-59
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 63 SKVLTYDDVTERVARHIGLD 122
SK+ TYD+V E VA+HIGL+
Sbjct: 779 SKLDTYDNVVEEVAQHIGLN 798
Score = 23.1 bits (48), Expect(5) = 2e-59
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 2 VVHF*SLDKPEEDGFCPEL 58
VV F L+KP+ED F EL
Sbjct: 760 VVRFRILEKPKEDDFSLEL 778
>ref|XP_002873269.1| ubiquitin-specific protease 12 [Arabidopsis lyrata subsp. lyrata]
gi|297319106|gb|EFH49528.1| ubiquitin-specific protease
12 [Arabidopsis lyrata subsp. lyrata]
Length = 1115
Score = 129 bits (323), Expect(5) = 4e-59
Identities = 78/175 (44%), Positives = 92/175 (52%), Gaps = 56/175 (32%)
Frame = +1
Query: 124 LDDPAKIRLTPHNCYSQQPKSQAIKYRG-------------------------------- 207
LDDP+K+RLT HNCYSQQPK Q IKYRG
Sbjct: 839 LDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQG 898
Query: 208 -KV*KL*RVLYHATNANTVVHSVRLPKQSTIGDVISYLKTKVEPSYPDTELRSLEVFYHK 384
K K+ +HAT V+H++RLPKQST+GDVI+ LKTKVE S+PD ELR LEVFYHK
Sbjct: 899 LKTLKV--AFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRLLEVFYHK 956
Query: 385 IYKI-----------------------PEEKNLGLWDCLIHVYHFTNDASQSQML 480
IYKI EEKN+G D LI VYHF + Q+Q +
Sbjct: 957 IYKIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQQV 1011
Score = 82.4 bits (202), Expect(5) = 4e-59
Identities = 36/50 (72%), Positives = 45/50 (90%)
Frame = +3
Query: 597 RWKFAFVSLGRPEYLQDSDIVARRFQRRDVYGAWEQYPSLEHSDSSWKRA 746
+WKFAF+S+GRPEYLQD+D+V RFQRRDVYGA+EQY LEH+D++ KRA
Sbjct: 1048 KWKFAFMSMGRPEYLQDTDVVYNRFQRRDVYGAFEQYLGLEHADTTPKRA 1097
Score = 53.9 bits (128), Expect(5) = 4e-59
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = +2
Query: 485 VQNFGEPFLFTIHEREIIGEVKLRIQKKLQFPDEEFAK 598
VQNFGEPF IHE E + E+K RIQKKL DE+FAK
Sbjct: 1011 VQNFGEPFFLVIHEGETLEEIKNRIQKKLHVSDEDFAK 1048
Score = 30.4 bits (67), Expect(5) = 4e-59
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 63 SKVLTYDDVTERVARHIGLD 122
SK+ TYDDV E+VA +GLD
Sbjct: 821 SKLHTYDDVVEKVAEKLGLD 840
Score = 22.7 bits (47), Expect(5) = 4e-59
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 2 VVHF*SLDKPEEDGFCPEL 58
+V F +L+KP+ED F EL
Sbjct: 802 LVRFRALEKPKEDEFVLEL 820
>dbj|BAB11409.1| ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana]
Length = 1126
Score = 129 bits (323), Expect(5) = 8e-59
Identities = 78/175 (44%), Positives = 92/175 (52%), Gaps = 56/175 (32%)
Frame = +1
Query: 124 LDDPAKIRLTPHNCYSQQPKSQAIKYRG-------------------------------- 207
LDDP+K+RLT HNCYSQQPK Q IKYRG
Sbjct: 850 LDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQG 909
Query: 208 -KV*KL*RVLYHATNANTVVHSVRLPKQSTIGDVISYLKTKVEPSYPDTELRSLEVFYHK 384
K K+ +HAT V+H++RLPKQST+GDVI+ LKTKVE S+PD ELR LEVFYHK
Sbjct: 910 LKTLKV--AFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRLLEVFYHK 967
Query: 385 IYKI-----------------------PEEKNLGLWDCLIHVYHFTNDASQSQML 480
IYKI EEKN+G D LI VYHF + Q+Q +
Sbjct: 968 IYKIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQQV 1022
Score = 82.4 bits (202), Expect(5) = 8e-59
Identities = 36/50 (72%), Positives = 45/50 (90%)
Frame = +3
Query: 597 RWKFAFVSLGRPEYLQDSDIVARRFQRRDVYGAWEQYPSLEHSDSSWKRA 746
+WKFAF+S+GRPEYLQD+D+V RFQRRDVYGA+EQY LEH+D++ KRA
Sbjct: 1059 KWKFAFMSMGRPEYLQDTDVVYNRFQRRDVYGAFEQYLGLEHADTTPKRA 1108
Score = 53.9 bits (128), Expect(5) = 8e-59
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = +2
Query: 485 VQNFGEPFLFTIHEREIIGEVKLRIQKKLQFPDEEFAK 598
VQNFGEPF IHE E + E+K RIQKKL DE+FAK
Sbjct: 1022 VQNFGEPFFLVIHEGETLEEIKNRIQKKLHVSDEDFAK 1059
Score = 29.3 bits (64), Expect(5) = 8e-59
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 63 SKVLTYDDVTERVARHIGLD 122
SK TYDDV E+VA +GLD
Sbjct: 832 SKQHTYDDVVEKVAEKLGLD 851
Score = 22.7 bits (47), Expect(5) = 8e-59
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 2 VVHF*SLDKPEEDGFCPEL 58
+V F +L+KP+ED F EL
Sbjct: 813 LVRFRALEKPKEDEFVLEL 831
>ref|NP_568171.1| ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana]
gi|166201361|sp|Q9FPT1.2|UBP12_ARATH RecName:
Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; Short=AtUBP12; AltName:
Full=Ubiquitin thioesterase 12; AltName:
Full=Ubiquitin-specific-processing protease 12
gi|332003656|gb|AED91039.1| ubiquitin carboxyl-terminal
hydrolase 12 [Arabidopsis thaliana]
Length = 1116
Score = 129 bits (323), Expect(5) = 8e-59
Identities = 78/175 (44%), Positives = 92/175 (52%), Gaps = 56/175 (32%)
Frame = +1
Query: 124 LDDPAKIRLTPHNCYSQQPKSQAIKYRG-------------------------------- 207
LDDP+K+RLT HNCYSQQPK Q IKYRG
Sbjct: 840 LDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQG 899
Query: 208 -KV*KL*RVLYHATNANTVVHSVRLPKQSTIGDVISYLKTKVEPSYPDTELRSLEVFYHK 384
K K+ +HAT V+H++RLPKQST+GDVI+ LKTKVE S+PD ELR LEVFYHK
Sbjct: 900 LKTLKV--AFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRLLEVFYHK 957
Query: 385 IYKI-----------------------PEEKNLGLWDCLIHVYHFTNDASQSQML 480
IYKI EEKN+G D LI VYHF + Q+Q +
Sbjct: 958 IYKIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQQV 1012
Score = 82.4 bits (202), Expect(5) = 8e-59
Identities = 36/50 (72%), Positives = 45/50 (90%)
Frame = +3
Query: 597 RWKFAFVSLGRPEYLQDSDIVARRFQRRDVYGAWEQYPSLEHSDSSWKRA 746
+WKFAF+S+GRPEYLQD+D+V RFQRRDVYGA+EQY LEH+D++ KRA
Sbjct: 1049 KWKFAFMSMGRPEYLQDTDVVYNRFQRRDVYGAFEQYLGLEHADTTPKRA 1098
Score = 53.9 bits (128), Expect(5) = 8e-59
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = +2
Query: 485 VQNFGEPFLFTIHEREIIGEVKLRIQKKLQFPDEEFAK 598
VQNFGEPF IHE E + E+K RIQKKL DE+FAK
Sbjct: 1012 VQNFGEPFFLVIHEGETLEEIKNRIQKKLHVSDEDFAK 1049
Score = 29.3 bits (64), Expect(5) = 8e-59
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 63 SKVLTYDDVTERVARHIGLD 122
SK TYDDV E+VA +GLD
Sbjct: 822 SKQHTYDDVVEKVAEKLGLD 841
Score = 22.7 bits (47), Expect(5) = 8e-59
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 2 VVHF*SLDKPEEDGFCPEL 58
+V F +L+KP+ED F EL
Sbjct: 803 LVRFRALEKPKEDEFVLEL 821
>ref|NP_850783.1| ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana]
gi|13430572|gb|AAK25908.1|AF360198_1 putative
ubiquitin-specific protease UBP12 [Arabidopsis thaliana]
gi|23296847|gb|AAN13185.1| putative ubiquitin-specific
protease UBP12 [Arabidopsis thaliana]
gi|332003657|gb|AED91040.1| ubiquitin carboxyl-terminal
hydrolase 12 [Arabidopsis thaliana]
Length = 1115
Score = 129 bits (323), Expect(5) = 8e-59
Identities = 78/175 (44%), Positives = 92/175 (52%), Gaps = 56/175 (32%)
Frame = +1
Query: 124 LDDPAKIRLTPHNCYSQQPKSQAIKYRG-------------------------------- 207
LDDP+K+RLT HNCYSQQPK Q IKYRG
Sbjct: 839 LDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQG 898
Query: 208 -KV*KL*RVLYHATNANTVVHSVRLPKQSTIGDVISYLKTKVEPSYPDTELRSLEVFYHK 384
K K+ +HAT V+H++RLPKQST+GDVI+ LKTKVE S+PD ELR LEVFYHK
Sbjct: 899 LKTLKV--AFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRLLEVFYHK 956
Query: 385 IYKI-----------------------PEEKNLGLWDCLIHVYHFTNDASQSQML 480
IYKI EEKN+G D LI VYHF + Q+Q +
Sbjct: 957 IYKIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQQV 1011
Score = 82.4 bits (202), Expect(5) = 8e-59
Identities = 36/50 (72%), Positives = 45/50 (90%)
Frame = +3
Query: 597 RWKFAFVSLGRPEYLQDSDIVARRFQRRDVYGAWEQYPSLEHSDSSWKRA 746
+WKFAF+S+GRPEYLQD+D+V RFQRRDVYGA+EQY LEH+D++ KRA
Sbjct: 1048 KWKFAFMSMGRPEYLQDTDVVYNRFQRRDVYGAFEQYLGLEHADTTPKRA 1097
Score = 53.9 bits (128), Expect(5) = 8e-59
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = +2
Query: 485 VQNFGEPFLFTIHEREIIGEVKLRIQKKLQFPDEEFAK 598
VQNFGEPF IHE E + E+K RIQKKL DE+FAK
Sbjct: 1011 VQNFGEPFFLVIHEGETLEEIKNRIQKKLHVSDEDFAK 1048
Score = 29.3 bits (64), Expect(5) = 8e-59
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 63 SKVLTYDDVTERVARHIGLD 122
SK TYDDV E+VA +GLD
Sbjct: 821 SKQHTYDDVVEKVAEKLGLD 840
Score = 22.7 bits (47), Expect(5) = 8e-59
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 2 VVHF*SLDKPEEDGFCPEL 58
+V F +L+KP+ED F EL
Sbjct: 802 LVRFRALEKPKEDEFVLEL 820
>ref|XP_004979554.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform X1
[Setaria italica]
Length = 1119
Score = 129 bits (325), Expect(5) = 1e-58
Identities = 79/173 (45%), Positives = 91/173 (52%), Gaps = 54/173 (31%)
Frame = +1
Query: 124 LDDPAKIRLTPHNCYSQQPKSQAIKYRGKV*KL*RVLY---------------------- 237
LDDPAKIRLT HNCYSQQPK Q +KYRG L +++
Sbjct: 842 LDDPAKIRLTSHNCYSQQPKPQPVKYRGVEHLLDMLIHYNQTSDILYYEVLDIPLPELQF 901
Query: 238 ---------HATNANTVVHSVRLPKQSTIGDVISYLKTKVEPSYPDTELRSLEVFYHKIY 390
H T V+HS+RLPK STI DVI+ LKTKVE S P+ ELR LEVFYHKIY
Sbjct: 902 LKTLKVAFHHPTKDEVVIHSIRLPKNSTIADVINDLKTKVELSSPNAELRVLEVFYHKIY 961
Query: 391 KI-----------------------PEEKNLGLWDCLIHVYHFTNDASQSQML 480
KI EEKN+G D LIHVYHFT D +Q+Q +
Sbjct: 962 KIFPLLEKIENINDQYWTLRAEEIPEEEKNIGPNDRLIHVYHFTKDINQTQQI 1014
Score = 83.6 bits (205), Expect(5) = 1e-58
Identities = 34/50 (68%), Positives = 45/50 (90%)
Frame = +3
Query: 597 RWKFAFVSLGRPEYLQDSDIVARRFQRRDVYGAWEQYPSLEHSDSSWKRA 746
+WKFAF+S+ RP+YLQDSD++A RFQRR+VYGAWEQY +EH+D++ KRA
Sbjct: 1051 KWKFAFISMNRPDYLQDSDVIAPRFQRREVYGAWEQYLGMEHTDTAPKRA 1100
Score = 45.4 bits (106), Expect(5) = 1e-58
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = +2
Query: 485 VQNFGEPFLFTIHEREIIGEVKLRIQKKLQFPDEEFAK 598
+QNFG+PF + E E + EVK RI+ KLQ EEF+K
Sbjct: 1014 IQNFGDPFFLLVREGETLAEVKKRIKSKLQVSAEEFSK 1051
Score = 30.8 bits (68), Expect(5) = 1e-58
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 63 SKVLTYDDVTERVARHIGLD 122
SK+ TYDDV ERVAR + LD
Sbjct: 824 SKLHTYDDVVERVARQLELD 843
Score = 27.3 bits (59), Expect(5) = 1e-58
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 2 VVHF*SLDKPEEDGFCPEL 58
VVHF SL+KP++D F EL
Sbjct: 805 VVHFRSLEKPKDDDFSLEL 823