BLASTX nr result

ID: Papaver27_contig00030581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00030581
         (503 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004304202.1| PREDICTED: probable E3 ubiquitin-protein lig...    62   1e-07
ref|XP_002281545.1| PREDICTED: probable E3 ubiquitin-protein lig...    56   6e-06
emb|CAN65617.1| hypothetical protein VITISV_032298 [Vitis vinifera]    56   6e-06

>ref|XP_004304202.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Fragaria vesca subsp. vesca]
          Length = 478

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 33/60 (55%), Positives = 42/60 (70%)
 Frame = +2

Query: 236 GEV*NLAAGGGH*AMLTDSCS*KELFEFSLADSVTP*NAHVISCLHLKKNNKYFVEVLKR 415
           GEV  LAAGGGH A+LTD+CS KEL EF LADSVTP NA +I  +  + ++   V + +R
Sbjct: 396 GEVRKLAAGGGHSAVLTDACSLKELCEFRLADSVTPTNASIIEDIASRTDSDNLVRLCER 455


>ref|XP_002281545.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
           vinifera] gi|298204453|emb|CBI16933.3| unnamed protein
           product [Vitis vinifera]
          Length = 478

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/42 (71%), Positives = 32/42 (76%)
 Frame = +2

Query: 236 GEV*NLAAGGGH*AMLTDSCS*KELFEFSLADSVTP*NAHVI 361
           GEV  LAAGGGH A+LTD+CS KEL EF LAD VTP NA  I
Sbjct: 394 GEVRQLAAGGGHSAVLTDACSLKELCEFRLADCVTPSNASEI 435


>emb|CAN65617.1| hypothetical protein VITISV_032298 [Vitis vinifera]
          Length = 461

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/42 (71%), Positives = 32/42 (76%)
 Frame = +2

Query: 236 GEV*NLAAGGGH*AMLTDSCS*KELFEFSLADSVTP*NAHVI 361
           GEV  LAAGGGH A+LTD+CS KEL EF LAD VTP NA  I
Sbjct: 394 GEVRQLAAGGGHSAVLTDACSLKELCEFRLADCVTPSNASEI 435


Top