BLASTX nr result
ID: Papaver27_contig00029988
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver27_contig00029988 (1963 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 671 0.0 ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isof... 665 0.0 ref|XP_007013878.1| DNA/RNA polymerases superfamily protein isof... 661 0.0 ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citr... 660 0.0 ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 661 0.0 emb|CBI36559.3| unnamed protein product [Vitis vinifera] 661 0.0 ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prun... 657 0.0 ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 654 0.0 ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 654 0.0 ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 654 0.0 ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 652 0.0 gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Mimulus... 647 0.0 ref|XP_002325119.1| DNA-directed RNA polymerase family protein [... 652 0.0 ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 650 0.0 sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras... 648 0.0 ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Popu... 647 0.0 emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea] 639 0.0 sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras... 639 0.0 ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thal... 634 0.0 ref|XP_002880548.1| PDE319/SCA3 [Arabidopsis lyrata subsp. lyrat... 634 0.0 >ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Citrus sinensis] Length = 1009 Score = 671 bits (1731), Expect(2) = 0.0 Identities = 320/388 (82%), Positives = 365/388 (94%) Frame = -1 Query: 1756 KAGLRWPKIHLANLYAGGVDKLPYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQ 1577 K+GLRW KIHLANL++GGV+KL ++ R+ FV+NHL +I DSA+ PI+G RWWL+AEDPFQ Sbjct: 622 KSGLRWLKIHLANLFSGGVEKLSHDGRLAFVENHLYEIFDSAENPINGSRWWLTAEDPFQ 681 Query: 1576 CLAACMNLSDSLRSSSPYTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPA 1397 CLAAC+NLS++L+SSSP++VISHLPIHQDGSCNGLQHYAALGR++LEAAAVNL+AGE+PA Sbjct: 682 CLAACINLSEALKSSSPHSVISHLPIHQDGSCNGLQHYAALGRNTLEAAAVNLVAGEKPA 741 Query: 1396 DVYSEIAARVHDIMKRDCSKDPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAR 1217 DVYSEIA RVH+IMKRD +KDP+ H A LA +LIDQVDRKLVKQTVMTSVYGVT+VGAR Sbjct: 742 DVYSEIAVRVHEIMKRDSNKDPSKHPQALLAKILIDQVDRKLVKQTVMTSVYGVTFVGAR 801 Query: 1216 EQIKRRLMERGNITDDRLLFSASCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENE 1037 EQIKRRL E+G+ITDDR LF+A+CYAAKVT+TALGE+F+AARSIMGWLGDCAKVIASEN+ Sbjct: 802 EQIKRRLEEKGHITDDRQLFAAACYAAKVTLTALGEIFEAARSIMGWLGDCAKVIASENQ 861 Query: 1036 PVRWTTPLGLPVVQPYRKPERHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGS 857 PVRWTTPLGLPVVQPY K ERHLIRTSLQVLALQREG SV+++KQ++AFPPNFVHSLDGS Sbjct: 862 PVRWTTPLGLPVVQPYCKNERHLIRTSLQVLALQREGKSVEIRKQRTAFPPNFVHSLDGS 921 Query: 856 HMMMTAVACRDAGLHFAGVHDSFWTHACDVDKMNLILREKFVELYNMPILENLLESFQTS 677 HMMMTAVACRDAGLHFAGVHDSFWTHACDVD+MN ILR+KFVELYNMPILENLLESFQTS Sbjct: 922 HMMMTAVACRDAGLHFAGVHDSFWTHACDVDEMNQILRKKFVELYNMPILENLLESFQTS 981 Query: 676 FPTLSFPPLPDRGDFDLENVHESPYFFN 593 +PTLSFPPLP+RG+FDLE V ESPYFFN Sbjct: 982 YPTLSFPPLPERGNFDLEEVLESPYFFN 1009 Score = 134 bits (336), Expect(2) = 0.0 Identities = 62/75 (82%), Positives = 68/75 (90%), Gaps = 1/75 (1%) Frame = -3 Query: 1961 RERHAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFA 1782 +ERH+QRCD ELKLSVAR+MKDEEGFYYPHNLDFRGRAYPMH HLNHLSSD+CRGVLEFA Sbjct: 556 QERHSQRCDTELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFA 615 Query: 1781 EGRPLRKA-QSWLAL 1740 EGRPL K+ WL + Sbjct: 616 EGRPLGKSGLRWLKI 630 >ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao] gi|508784240|gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao] Length = 978 Score = 665 bits (1717), Expect(2) = 0.0 Identities = 317/388 (81%), Positives = 361/388 (93%) Frame = -1 Query: 1756 KAGLRWPKIHLANLYAGGVDKLPYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQ 1577 ++GL W KIHLANL+AGGV+KL ++ R+ FVDNHLDDI DSA+ PI+G RWWL+AEDPFQ Sbjct: 591 RSGLHWLKIHLANLFAGGVEKLSHDGRLAFVDNHLDDIFDSAENPINGNRWWLTAEDPFQ 650 Query: 1576 CLAACMNLSDSLRSSSPYTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPA 1397 CLAAC+NLS+SL+SSSP++V+S+LPIHQDGSCNGLQHYAALGRDSLEAAAVNL+AGE+PA Sbjct: 651 CLAACINLSESLKSSSPHSVLSYLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPA 710 Query: 1396 DVYSEIAARVHDIMKRDCSKDPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAR 1217 DVYSEIA RVH+IMKRD KDPAT+ A LA LLIDQVDRKLVKQTVMTSVYGVT+VGAR Sbjct: 711 DVYSEIAVRVHNIMKRDSDKDPATNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAR 770 Query: 1216 EQIKRRLMERGNITDDRLLFSASCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENE 1037 EQIKRRL E+G+ITDDR+LF+A+CY AKVT+ ALGE+FQAAR+IMGWLGDCAKVIASEN+ Sbjct: 771 EQIKRRLEEKGHITDDRVLFAAACYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQ 830 Query: 1036 PVRWTTPLGLPVVQPYRKPERHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGS 857 PV+WTTPLGLPVVQPY K ERHLIRTSLQVLALQREGDSV+V+KQ++AFPPNFVHSLDGS Sbjct: 831 PVQWTTPLGLPVVQPYYKSERHLIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSLDGS 890 Query: 856 HMMMTAVACRDAGLHFAGVHDSFWTHACDVDKMNLILREKFVELYNMPILENLLESFQTS 677 HMMMTAVACRDAGLHFAGVHDSFWTHACDV+KMN ILREKFVELY+MP+LENL ES QTS Sbjct: 891 HMMMTAVACRDAGLHFAGVHDSFWTHACDVEKMNQILREKFVELYSMPVLENLFESVQTS 950 Query: 676 FPTLSFPPLPDRGDFDLENVHESPYFFN 593 +P+L FPPLP+RG+FDL V +SPYFFN Sbjct: 951 YPSLVFPPLPERGNFDLREVLKSPYFFN 978 Score = 134 bits (338), Expect(2) = 0.0 Identities = 63/75 (84%), Positives = 67/75 (89%), Gaps = 1/75 (1%) Frame = -3 Query: 1961 RERHAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFA 1782 RERH+QRCD ELKLSVARKM++EEGFYYPHNLDFRGRAYPMH HLNHLSSDLCRGVLEFA Sbjct: 525 RERHSQRCDTELKLSVARKMENEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFA 584 Query: 1781 EGRPL-RKAQSWLAL 1740 EGRPL R WL + Sbjct: 585 EGRPLGRSGLHWLKI 599 >ref|XP_007013878.1| DNA/RNA polymerases superfamily protein isoform 2 [Theobroma cacao] gi|508784241|gb|EOY31497.1| DNA/RNA polymerases superfamily protein isoform 2 [Theobroma cacao] Length = 857 Score = 661 bits (1705), Expect(2) = 0.0 Identities = 317/389 (81%), Positives = 361/389 (92%), Gaps = 1/389 (0%) Frame = -1 Query: 1756 KAGLRWPKIHLANLYAGGVDKLPYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQ 1577 ++GL W KIHLANL+AGGV+KL ++ R+ FVDNHLDDI DSA+ PI+G RWWL+AEDPFQ Sbjct: 469 RSGLHWLKIHLANLFAGGVEKLSHDGRLAFVDNHLDDIFDSAENPINGNRWWLTAEDPFQ 528 Query: 1576 CLAACMNLSDSLRSSSPYTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPA 1397 CLAAC+NLS+SL+SSSP++V+S+LPIHQDGSCNGLQHYAALGRDSLEAAAVNL+AGE+PA Sbjct: 529 CLAACINLSESLKSSSPHSVLSYLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPA 588 Query: 1396 DVYSEIAARVHDIMKRDCSKDPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAR 1217 DVYSEIA RVH+IMKRD KDPAT+ A LA LLIDQVDRKLVKQTVMTSVYGVT+VGAR Sbjct: 589 DVYSEIAVRVHNIMKRDSDKDPATNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAR 648 Query: 1216 EQIKRRLMERGNITDDRLLFSASCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENE 1037 EQIKRRL E+G+ITDDR+LF+A+CY AKVT+ ALGE+FQAAR+IMGWLGDCAKVIASEN+ Sbjct: 649 EQIKRRLEEKGHITDDRVLFAAACYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQ 708 Query: 1036 PVRWTTPLGLPVVQPYRKPERHLIRTSLQVLALQREGDS-VDVKKQKSAFPPNFVHSLDG 860 PV+WTTPLGLPVVQPY K ERHLIRTSLQVLALQREGDS V+V+KQ++AFPPNFVHSLDG Sbjct: 709 PVQWTTPLGLPVVQPYYKSERHLIRTSLQVLALQREGDSVVEVRKQRTAFPPNFVHSLDG 768 Query: 859 SHMMMTAVACRDAGLHFAGVHDSFWTHACDVDKMNLILREKFVELYNMPILENLLESFQT 680 SHMMMTAVACRDAGLHFAGVHDSFWTHACDV+KMN ILREKFVELY+MP+LENL ES QT Sbjct: 769 SHMMMTAVACRDAGLHFAGVHDSFWTHACDVEKMNQILREKFVELYSMPVLENLFESVQT 828 Query: 679 SFPTLSFPPLPDRGDFDLENVHESPYFFN 593 S+P+L FPPLP+RG+FDL V +SPYFFN Sbjct: 829 SYPSLVFPPLPERGNFDLREVLKSPYFFN 857 Score = 134 bits (338), Expect(2) = 0.0 Identities = 63/75 (84%), Positives = 67/75 (89%), Gaps = 1/75 (1%) Frame = -3 Query: 1961 RERHAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFA 1782 RERH+QRCD ELKLSVARKM++EEGFYYPHNLDFRGRAYPMH HLNHLSSDLCRGVLEFA Sbjct: 403 RERHSQRCDTELKLSVARKMENEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFA 462 Query: 1781 EGRPL-RKAQSWLAL 1740 EGRPL R WL + Sbjct: 463 EGRPLGRSGLHWLKI 477 >ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citrus clementina] gi|557556792|gb|ESR66806.1| hypothetical protein CICLE_v10007333mg [Citrus clementina] Length = 1012 Score = 660 bits (1704), Expect(2) = 0.0 Identities = 315/388 (81%), Positives = 363/388 (93%) Frame = -1 Query: 1756 KAGLRWPKIHLANLYAGGVDKLPYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQ 1577 K+GLRW KIHLANL++GGV+KL ++ R+ FV+NHL +I DSA+ PI+G RWWL+AEDPFQ Sbjct: 625 KSGLRWLKIHLANLFSGGVEKLSHDGRLAFVENHLYEIFDSAENPINGSRWWLTAEDPFQ 684 Query: 1576 CLAACMNLSDSLRSSSPYTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPA 1397 CLAAC+NL+++L+SSSP++VISHLPIHQDGSCNGLQHYAALGR++LEAAAVNL+AGE+PA Sbjct: 685 CLAACINLAEALKSSSPHSVISHLPIHQDGSCNGLQHYAALGRNTLEAAAVNLVAGEKPA 744 Query: 1396 DVYSEIAARVHDIMKRDCSKDPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAR 1217 DVYSEIA RVH+IMKRD +KD + H A LA +LIDQVDRKLVKQTVMTSVYGVT+VGAR Sbjct: 745 DVYSEIAVRVHEIMKRDSNKDHSKHPQALLAKILIDQVDRKLVKQTVMTSVYGVTFVGAR 804 Query: 1216 EQIKRRLMERGNITDDRLLFSASCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENE 1037 EQIKRRL E+G+ITDDR LF+A+CYAAKVT+TALGE+F+AARSIMGWLGDCAKVIASEN+ Sbjct: 805 EQIKRRLEEKGHITDDRQLFAAACYAAKVTLTALGEIFEAARSIMGWLGDCAKVIASENQ 864 Query: 1036 PVRWTTPLGLPVVQPYRKPERHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGS 857 PVRWTTPLGLPVVQPY K ERHLIRTSLQVLALQREG+ V+++KQ++AFPPNFVHSLDGS Sbjct: 865 PVRWTTPLGLPVVQPYCKNERHLIRTSLQVLALQREGNLVEIRKQRTAFPPNFVHSLDGS 924 Query: 856 HMMMTAVACRDAGLHFAGVHDSFWTHACDVDKMNLILREKFVELYNMPILENLLESFQTS 677 HMMMTAVACRDAGLHFAGVHDSFWTHACDVD+MN ILR+KFVELYNMP+LENLLESFQTS Sbjct: 925 HMMMTAVACRDAGLHFAGVHDSFWTHACDVDEMNQILRKKFVELYNMPMLENLLESFQTS 984 Query: 676 FPTLSFPPLPDRGDFDLENVHESPYFFN 593 +PTLSFP LP+RG+FDLE V ESPYFFN Sbjct: 985 YPTLSFPSLPERGNFDLEEVLESPYFFN 1012 Score = 134 bits (336), Expect(2) = 0.0 Identities = 62/75 (82%), Positives = 68/75 (90%), Gaps = 1/75 (1%) Frame = -3 Query: 1961 RERHAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFA 1782 +ERH+QRCD ELKLSVAR+MKDEEGFYYPHNLDFRGRAYPMH HLNHLSSD+CRGVLEFA Sbjct: 559 QERHSQRCDTELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFA 618 Query: 1781 EGRPLRKA-QSWLAL 1740 EGRPL K+ WL + Sbjct: 619 EGRPLGKSGLRWLKI 633 >ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis vinifera] Length = 979 Score = 661 bits (1706), Expect(2) = 0.0 Identities = 319/388 (82%), Positives = 356/388 (91%) Frame = -1 Query: 1756 KAGLRWPKIHLANLYAGGVDKLPYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQ 1577 K+GLRW KI LANLYAGGV+KL Y+ R+ FVDNHLDD+ DSA P++G RWWL+AEDPFQ Sbjct: 592 KSGLRWLKIQLANLYAGGVEKLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAEDPFQ 651 Query: 1576 CLAACMNLSDSLRSSSPYTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPA 1397 CLAAC+NLS++LRSSSP+TVISHLPIHQDGSCNGLQHYAALGR+SLEA+AVNL+AGE+PA Sbjct: 652 CLAACINLSEALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRNSLEASAVNLVAGEKPA 711 Query: 1396 DVYSEIAARVHDIMKRDCSKDPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAR 1217 DVYSEIAARVH+IMKRD +KDPAT A LA +LI QVDRKLVKQTVMTSVYGVTY+GAR Sbjct: 712 DVYSEIAARVHEIMKRDSNKDPATDPKALLAKVLIGQVDRKLVKQTVMTSVYGVTYIGAR 771 Query: 1216 EQIKRRLMERGNITDDRLLFSASCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENE 1037 EQIKRRL E+G ITD+RLLF+A+CYAAKVT+ ALGE+FQAAR IM WLG+CAKVIASEN+ Sbjct: 772 EQIKRRLAEKGLITDERLLFTAACYAAKVTLAALGEIFQAARDIMAWLGECAKVIASENQ 831 Query: 1036 PVRWTTPLGLPVVQPYRKPERHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGS 857 PV+WTTPLGLPV+QPY K ERHLIRTSLQVLALQREG V ++KQ++AFPPNFVHSLDGS Sbjct: 832 PVQWTTPLGLPVIQPYCKSERHLIRTSLQVLALQREGSVVVIRKQRTAFPPNFVHSLDGS 891 Query: 856 HMMMTAVACRDAGLHFAGVHDSFWTHACDVDKMNLILREKFVELYNMPILENLLESFQTS 677 HMMMTAVACRDAGL FAGVHDSFWTHACDVDKMN ILREKFVELY+MPILENLLESFQTS Sbjct: 892 HMMMTAVACRDAGLCFAGVHDSFWTHACDVDKMNQILREKFVELYSMPILENLLESFQTS 951 Query: 676 FPTLSFPPLPDRGDFDLENVHESPYFFN 593 PTL+FPPLPDRG+FDL V ESPYFFN Sbjct: 952 HPTLTFPPLPDRGNFDLREVLESPYFFN 979 Score = 132 bits (333), Expect(2) = 0.0 Identities = 62/75 (82%), Positives = 67/75 (89%), Gaps = 1/75 (1%) Frame = -3 Query: 1961 RERHAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFA 1782 +ERH+ RCD E+KLSVARKMKDEEGFYYPHNLDFRGRAYPMH HLNHLSSDLCRGVLEFA Sbjct: 526 QERHSLRCDTEIKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFA 585 Query: 1781 EGRPLRKA-QSWLAL 1740 EGRPL K+ WL + Sbjct: 586 EGRPLGKSGLRWLKI 600 >emb|CBI36559.3| unnamed protein product [Vitis vinifera] Length = 808 Score = 661 bits (1706), Expect(2) = 0.0 Identities = 319/388 (82%), Positives = 356/388 (91%) Frame = -1 Query: 1756 KAGLRWPKIHLANLYAGGVDKLPYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQ 1577 K+GLRW KI LANLYAGGV+KL Y+ R+ FVDNHLDD+ DSA P++G RWWL+AEDPFQ Sbjct: 421 KSGLRWLKIQLANLYAGGVEKLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAEDPFQ 480 Query: 1576 CLAACMNLSDSLRSSSPYTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPA 1397 CLAAC+NLS++LRSSSP+TVISHLPIHQDGSCNGLQHYAALGR+SLEA+AVNL+AGE+PA Sbjct: 481 CLAACINLSEALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRNSLEASAVNLVAGEKPA 540 Query: 1396 DVYSEIAARVHDIMKRDCSKDPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAR 1217 DVYSEIAARVH+IMKRD +KDPAT A LA +LI QVDRKLVKQTVMTSVYGVTY+GAR Sbjct: 541 DVYSEIAARVHEIMKRDSNKDPATDPKALLAKVLIGQVDRKLVKQTVMTSVYGVTYIGAR 600 Query: 1216 EQIKRRLMERGNITDDRLLFSASCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENE 1037 EQIKRRL E+G ITD+RLLF+A+CYAAKVT+ ALGE+FQAAR IM WLG+CAKVIASEN+ Sbjct: 601 EQIKRRLAEKGLITDERLLFTAACYAAKVTLAALGEIFQAARDIMAWLGECAKVIASENQ 660 Query: 1036 PVRWTTPLGLPVVQPYRKPERHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGS 857 PV+WTTPLGLPV+QPY K ERHLIRTSLQVLALQREG V ++KQ++AFPPNFVHSLDGS Sbjct: 661 PVQWTTPLGLPVIQPYCKSERHLIRTSLQVLALQREGSVVVIRKQRTAFPPNFVHSLDGS 720 Query: 856 HMMMTAVACRDAGLHFAGVHDSFWTHACDVDKMNLILREKFVELYNMPILENLLESFQTS 677 HMMMTAVACRDAGL FAGVHDSFWTHACDVDKMN ILREKFVELY+MPILENLLESFQTS Sbjct: 721 HMMMTAVACRDAGLCFAGVHDSFWTHACDVDKMNQILREKFVELYSMPILENLLESFQTS 780 Query: 676 FPTLSFPPLPDRGDFDLENVHESPYFFN 593 PTL+FPPLPDRG+FDL V ESPYFFN Sbjct: 781 HPTLTFPPLPDRGNFDLREVLESPYFFN 808 Score = 132 bits (333), Expect(2) = 0.0 Identities = 62/75 (82%), Positives = 67/75 (89%), Gaps = 1/75 (1%) Frame = -3 Query: 1961 RERHAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFA 1782 +ERH+ RCD E+KLSVARKMKDEEGFYYPHNLDFRGRAYPMH HLNHLSSDLCRGVLEFA Sbjct: 355 QERHSLRCDTEIKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFA 414 Query: 1781 EGRPLRKA-QSWLAL 1740 EGRPL K+ WL + Sbjct: 415 EGRPLGKSGLRWLKI 429 >ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica] gi|462398756|gb|EMJ04424.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica] Length = 976 Score = 657 bits (1695), Expect(2) = 0.0 Identities = 315/388 (81%), Positives = 353/388 (90%) Frame = -1 Query: 1756 KAGLRWPKIHLANLYAGGVDKLPYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQ 1577 K+GLRW KIHLANLYAGGV+KL YE R+ FVDNH+DDI DSA P++G RWWL+AEDP Q Sbjct: 589 KSGLRWLKIHLANLYAGGVEKLSYEGRLAFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQ 648 Query: 1576 CLAACMNLSDSLRSSSPYTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPA 1397 CLAAC+NLS++L S SP+TVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNL+ G++PA Sbjct: 649 CLAACINLSEALNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVDGDKPA 708 Query: 1396 DVYSEIAARVHDIMKRDCSKDPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAR 1217 DVYSEIAARVH+IMKRD +KDP T A LA +L++Q+DRKLVKQTVMTSVYGVTYVGAR Sbjct: 709 DVYSEIAARVHEIMKRDSNKDPTTSPNALLARILVNQIDRKLVKQTVMTSVYGVTYVGAR 768 Query: 1216 EQIKRRLMERGNITDDRLLFSASCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENE 1037 EQIKRRL E+G ITDDRLLF+A+CYAAKVT+ ALGE+FQAAR IM WLGDCAKVIASEN+ Sbjct: 769 EQIKRRLEEKGLITDDRLLFTAACYAAKVTLAALGEIFQAARGIMSWLGDCAKVIASENQ 828 Query: 1036 PVRWTTPLGLPVVQPYRKPERHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGS 857 PVRWTTPLGLPVVQPY K ERHLIRTSLQVLALQRE +SVD++KQ++AFPPNFVHSLDGS Sbjct: 829 PVRWTTPLGLPVVQPYCKSERHLIRTSLQVLALQRESNSVDIRKQRTAFPPNFVHSLDGS 888 Query: 856 HMMMTAVACRDAGLHFAGVHDSFWTHACDVDKMNLILREKFVELYNMPILENLLESFQTS 677 HMMMTA+ACRDAGL FAGVHDSFWTH CDVD+MN ILREKFVELY+MPILE+LLESFQ S Sbjct: 889 HMMMTALACRDAGLRFAGVHDSFWTHPCDVDQMNEILREKFVELYSMPILESLLESFQAS 948 Query: 676 FPTLSFPPLPDRGDFDLENVHESPYFFN 593 +P L+FPPLP+RGDFDL V ESPYFFN Sbjct: 949 YPALTFPPLPERGDFDLLQVLESPYFFN 976 Score = 136 bits (342), Expect(2) = 0.0 Identities = 64/75 (85%), Positives = 68/75 (90%), Gaps = 1/75 (1%) Frame = -3 Query: 1961 RERHAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFA 1782 +ERH+QRCD ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMH HLNHLSSDLCRGVLEFA Sbjct: 523 QERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFA 582 Query: 1781 EGRPLRKA-QSWLAL 1740 EGRPL K+ WL + Sbjct: 583 EGRPLGKSGLRWLKI 597 >ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis sativus] Length = 975 Score = 654 bits (1686), Expect(2) = 0.0 Identities = 312/388 (80%), Positives = 356/388 (91%) Frame = -1 Query: 1756 KAGLRWPKIHLANLYAGGVDKLPYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQ 1577 K+GL W KIHLANLYAGGV+KL Y+ER+ FVD+HLD+I DSA P++G RWWL+AEDPFQ Sbjct: 588 KSGLHWLKIHLANLYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQ 647 Query: 1576 CLAACMNLSDSLRSSSPYTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPA 1397 CLAACMNLS++L+SS+P+TVIS+LPIHQDGSCNGLQHYAALGRD+LEAAAVNL+AGE+PA Sbjct: 648 CLAACMNLSEALKSSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPA 707 Query: 1396 DVYSEIAARVHDIMKRDCSKDPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAR 1217 DVYSEIAARVH IM RD SKDP T+ A LA LLIDQVDRKLVKQTVMTSVYGVTY+GAR Sbjct: 708 DVYSEIAARVHTIMIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAR 767 Query: 1216 EQIKRRLMERGNITDDRLLFSASCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENE 1037 EQIKRRL E+G I+DDRL F ASCYAAKVT++ALGE+F+AAR IMGWLGDCAKVIA +N+ Sbjct: 768 EQIKRRLEEKGLISDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQ 827 Query: 1036 PVRWTTPLGLPVVQPYRKPERHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGS 857 PVRWTTPLGLPVVQPY K ERHLIRTSLQVLALQREG+ VDV+KQ++AFPPNFVHSLDGS Sbjct: 828 PVRWTTPLGLPVVQPYYKSERHLIRTSLQVLALQREGNLVDVRKQRTAFPPNFVHSLDGS 887 Query: 856 HMMMTAVACRDAGLHFAGVHDSFWTHACDVDKMNLILREKFVELYNMPILENLLESFQTS 677 HMM+TA+ACRDAGL FAGVHDSFWTHACDVD+MNLILREKFVELY+MP+LE+LLE F+T+ Sbjct: 888 HMMLTALACRDAGLRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETT 947 Query: 676 FPTLSFPPLPDRGDFDLENVHESPYFFN 593 +P L+FP LP RGDFDL+ V +SPYFFN Sbjct: 948 YPGLTFPSLPGRGDFDLQEVLKSPYFFN 975 Score = 135 bits (339), Expect(2) = 0.0 Identities = 63/75 (84%), Positives = 68/75 (90%), Gaps = 1/75 (1%) Frame = -3 Query: 1961 RERHAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFA 1782 +E H+QRCD+ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMH HLNHLSSDLCRGVLEFA Sbjct: 522 QELHSQRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFA 581 Query: 1781 EGRPLRKA-QSWLAL 1740 EGRPL K+ WL + Sbjct: 582 EGRPLGKSGLHWLKI 596 >ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis sativus] Length = 975 Score = 654 bits (1686), Expect(2) = 0.0 Identities = 312/388 (80%), Positives = 356/388 (91%) Frame = -1 Query: 1756 KAGLRWPKIHLANLYAGGVDKLPYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQ 1577 K+GL W KIHLANLYAGGV+KL Y+ER+ FVD+HLD+I DSA P++G RWWL+AEDPFQ Sbjct: 588 KSGLHWLKIHLANLYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQ 647 Query: 1576 CLAACMNLSDSLRSSSPYTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPA 1397 CLAACMNLS++L+SS+P+TVIS+LPIHQDGSCNGLQHYAALGRD+LEAAAVNL+AGE+PA Sbjct: 648 CLAACMNLSEALKSSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPA 707 Query: 1396 DVYSEIAARVHDIMKRDCSKDPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAR 1217 DVYSEIAARVH IM RD SKDP T+ A LA LLIDQVDRKLVKQTVMTSVYGVTY+GAR Sbjct: 708 DVYSEIAARVHTIMIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAR 767 Query: 1216 EQIKRRLMERGNITDDRLLFSASCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENE 1037 EQIKRRL E+G I+DDRL F ASCYAAKVT++ALGE+F+AAR IMGWLGDCAKVIA +N+ Sbjct: 768 EQIKRRLEEKGLISDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQ 827 Query: 1036 PVRWTTPLGLPVVQPYRKPERHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGS 857 PVRWTTPLGLPVVQPY K ERHLIRTSLQVLALQREG+ VDV+KQ++AFPPNFVHSLDGS Sbjct: 828 PVRWTTPLGLPVVQPYYKSERHLIRTSLQVLALQREGNLVDVRKQRTAFPPNFVHSLDGS 887 Query: 856 HMMMTAVACRDAGLHFAGVHDSFWTHACDVDKMNLILREKFVELYNMPILENLLESFQTS 677 HMM+TA+ACRDAGL FAGVHDSFWTHACDVD+MNLILREKFVELY+MP+LE+LLE F+T+ Sbjct: 888 HMMLTALACRDAGLRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETT 947 Query: 676 FPTLSFPPLPDRGDFDLENVHESPYFFN 593 +P L+FP LP RGDFDL+ V +SPYFFN Sbjct: 948 YPGLTFPSLPGRGDFDLQEVLKSPYFFN 975 Score = 135 bits (339), Expect(2) = 0.0 Identities = 63/75 (84%), Positives = 68/75 (90%), Gaps = 1/75 (1%) Frame = -3 Query: 1961 RERHAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFA 1782 +E H+QRCD+ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMH HLNHLSSDLCRGVLEFA Sbjct: 522 QELHSQRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFA 581 Query: 1781 EGRPLRKA-QSWLAL 1740 EGRPL K+ WL + Sbjct: 582 EGRPLGKSGLHWLKI 596 >ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Fragaria vesca subsp. vesca] Length = 973 Score = 654 bits (1688), Expect(2) = 0.0 Identities = 311/388 (80%), Positives = 353/388 (90%) Frame = -1 Query: 1756 KAGLRWPKIHLANLYAGGVDKLPYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQ 1577 K+GLRW KIHLANLY+GGV+KL Y+ R+ FVDNH+DDI DSA P++G RWWL+AEDP Q Sbjct: 586 KSGLRWLKIHLANLYSGGVEKLSYDGRISFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQ 645 Query: 1576 CLAACMNLSDSLRSSSPYTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPA 1397 CLAAC+NLS++L S SP+TVISHLPIHQDGSCNGLQHYAALGRD+LEAAAVNL+AGE+PA Sbjct: 646 CLAACINLSEALNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPA 705 Query: 1396 DVYSEIAARVHDIMKRDCSKDPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAR 1217 DVYSEIA RVHDIMKRD +KDP T+ A LA +L++Q+DRKLVKQTVMTSVYGVTYVGAR Sbjct: 706 DVYSEIAVRVHDIMKRDSNKDPTTNPNALLAKVLVNQIDRKLVKQTVMTSVYGVTYVGAR 765 Query: 1216 EQIKRRLMERGNITDDRLLFSASCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENE 1037 EQIKRRL E+G ITDDRLLF+A+CYAAKVT+ ALGE+FQAAR IM WLGDCAKVIASEN+ Sbjct: 766 EQIKRRLEEKGLITDDRLLFTAACYAAKVTLAALGEIFQAARGIMSWLGDCAKVIASENQ 825 Query: 1036 PVRWTTPLGLPVVQPYRKPERHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGS 857 PVRWTTPLGLPVVQPY K ERHLIRTSLQVLALQRE + VDV+KQ++AFPPNFVHSLDGS Sbjct: 826 PVRWTTPLGLPVVQPYCKSERHLIRTSLQVLALQRESNLVDVRKQRTAFPPNFVHSLDGS 885 Query: 856 HMMMTAVACRDAGLHFAGVHDSFWTHACDVDKMNLILREKFVELYNMPILENLLESFQTS 677 HMMMTA+ACRDAG+ FAGVHDSFWTHACDVD+MN ILRE FVELY+ PILENLLESFQ + Sbjct: 886 HMMMTALACRDAGIRFAGVHDSFWTHACDVDQMNQILRENFVELYSKPILENLLESFQAA 945 Query: 676 FPTLSFPPLPDRGDFDLENVHESPYFFN 593 +P L+FPPLP+RGDFDL+ V +SPYFFN Sbjct: 946 YPELTFPPLPERGDFDLQEVLKSPYFFN 973 Score = 134 bits (336), Expect(2) = 0.0 Identities = 62/75 (82%), Positives = 68/75 (90%), Gaps = 1/75 (1%) Frame = -3 Query: 1961 RERHAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFA 1782 +ERH+QRCD ELKLSVAR+MKDE+GFYYPHNLDFRGRAYPMH HLNHLSSDLCRGVLEFA Sbjct: 520 QERHSQRCDTELKLSVARRMKDEDGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFA 579 Query: 1781 EGRPLRKA-QSWLAL 1740 EGRPL K+ WL + Sbjct: 580 EGRPLGKSGLRWLKI 594 >ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Solanum tuberosum] Length = 1015 Score = 652 bits (1682), Expect(2) = 0.0 Identities = 312/388 (80%), Positives = 354/388 (91%) Frame = -1 Query: 1756 KAGLRWPKIHLANLYAGGVDKLPYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQ 1577 K+GLRW K+HLA+LYAGG++KL Y+ R+ FV+NH+DDILDSA P++G RWWL+AEDP Q Sbjct: 628 KSGLRWLKVHLASLYAGGIEKLCYDARIAFVENHIDDILDSAHNPLNGNRWWLNAEDPLQ 687 Query: 1576 CLAACMNLSDSLRSSSPYTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPA 1397 CLAAC+NLS++L+S SP+TVISHLPIHQDGSCNGLQHYAALGRDS+EAAAVNL+AGE+PA Sbjct: 688 CLAACINLSEALKSPSPHTVISHLPIHQDGSCNGLQHYAALGRDSMEAAAVNLVAGEKPA 747 Query: 1396 DVYSEIAARVHDIMKRDCSKDPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAR 1217 DVY+EIA RV I++ D +KDPAT A LA LLIDQVDRKLVKQTVMTSVYGVTYVGAR Sbjct: 748 DVYTEIALRVDHIIRGDSTKDPATDPNALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAR 807 Query: 1216 EQIKRRLMERGNITDDRLLFSASCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENE 1037 EQIKRRL E+G I DDRLLF+ASCYAAKVT+ ALGE+FQAAR M WLGDCAKVIASEN+ Sbjct: 808 EQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTWLGDCAKVIASENQ 867 Query: 1036 PVRWTTPLGLPVVQPYRKPERHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGS 857 PVRWTTPLGLPVVQPY K +RH+IRTSLQVLALQREGD+V+V+KQ++AFPPNFVHSLDGS Sbjct: 868 PVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDAVEVRKQRTAFPPNFVHSLDGS 927 Query: 856 HMMMTAVACRDAGLHFAGVHDSFWTHACDVDKMNLILREKFVELYNMPILENLLESFQTS 677 HMMMTAVACRDAGLHFAGVHDSFWTHACDVD+MN ILREKFVELY+MPILE+LLESFQ S Sbjct: 928 HMMMTAVACRDAGLHFAGVHDSFWTHACDVDQMNRILREKFVELYSMPILEDLLESFQES 987 Query: 676 FPTLSFPPLPDRGDFDLENVHESPYFFN 593 +P L+FPPLP RGDFDL+ V ESPYFFN Sbjct: 988 YPALTFPPLPKRGDFDLQEVLESPYFFN 1015 Score = 131 bits (330), Expect(2) = 0.0 Identities = 59/68 (86%), Positives = 64/68 (94%) Frame = -3 Query: 1961 RERHAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFA 1782 +E H+QRCD ELKLSVARK+KDEEGFYYPHNLDFRGRAYPMH HLNHLSSDLCRG+LEFA Sbjct: 562 QELHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFA 621 Query: 1781 EGRPLRKA 1758 EGRPL K+ Sbjct: 622 EGRPLGKS 629 >gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Mimulus guttatus] Length = 941 Score = 647 bits (1669), Expect(2) = 0.0 Identities = 308/388 (79%), Positives = 352/388 (90%) Frame = -1 Query: 1756 KAGLRWPKIHLANLYAGGVDKLPYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQ 1577 K+GLRW KIH+ANLY GGV+KL Y++RV FV+N++ +I DSA ++G RWWL AEDPFQ Sbjct: 554 KSGLRWLKIHVANLYGGGVEKLSYDDRVAFVENNISEIFDSADNSLNGNRWWLKAEDPFQ 613 Query: 1576 CLAACMNLSDSLRSSSPYTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPA 1397 CLAAC+NL ++L+S SP+TVISHLPIHQDGSCNGLQHYAALGRDS EAAAVNL+AG++P+ Sbjct: 614 CLAACINLVEALKSPSPHTVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGDKPS 673 Query: 1396 DVYSEIAARVHDIMKRDCSKDPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAR 1217 DVYSEIA RVH+IMKRD KDP T A +A +LI QVDRKLVKQTVMTSVYGVTYVGAR Sbjct: 674 DVYSEIAERVHNIMKRDSEKDPETDRHALIAKVLIGQVDRKLVKQTVMTSVYGVTYVGAR 733 Query: 1216 EQIKRRLMERGNITDDRLLFSASCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENE 1037 EQIKRRL E+G ITDD+LLFSA+CYAAKVT+ ALGE+FQAAR+IM WLGDCAK+IASENE Sbjct: 734 EQIKRRLEEKGLITDDKLLFSAACYAAKVTLAALGELFQAARAIMAWLGDCAKIIASENE 793 Query: 1036 PVRWTTPLGLPVVQPYRKPERHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGS 857 PVRWTTPLGLPVVQPY K +RH+IRTSLQVLALQREGDSV+V+KQ++AFPPNFVHSLDGS Sbjct: 794 PVRWTTPLGLPVVQPYFKSQRHVIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSLDGS 853 Query: 856 HMMMTAVACRDAGLHFAGVHDSFWTHACDVDKMNLILREKFVELYNMPILENLLESFQTS 677 HMMMTA+ACRDAGL FAGVHDSFWTHACDVD+MN ILR+KFV+LY+MPILENLLESF+TS Sbjct: 854 HMMMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYSMPILENLLESFETS 913 Query: 676 FPTLSFPPLPDRGDFDLENVHESPYFFN 593 +PTL FPPLP+RGDF LE V ESPYFFN Sbjct: 914 YPTLKFPPLPNRGDFLLEQVIESPYFFN 941 Score = 136 bits (342), Expect(2) = 0.0 Identities = 64/75 (85%), Positives = 68/75 (90%), Gaps = 1/75 (1%) Frame = -3 Query: 1961 RERHAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFA 1782 +ERH+QRCD ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMH HLNHLSSDLCRGVLEFA Sbjct: 488 QERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFA 547 Query: 1781 EGRPLRKA-QSWLAL 1740 EGRPL K+ WL + Sbjct: 548 EGRPLGKSGLRWLKI 562 >ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa] gi|222866553|gb|EEF03684.1| DNA-directed RNA polymerase family protein [Populus trichocarpa] Length = 882 Score = 652 bits (1683), Expect(2) = 0.0 Identities = 310/388 (79%), Positives = 355/388 (91%) Frame = -1 Query: 1756 KAGLRWPKIHLANLYAGGVDKLPYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQ 1577 K+GLRW KIHLANLY+GGV+KL ++ R+ FV+NHL +I DSA+ P++GKRWWL AEDPFQ Sbjct: 495 KSGLRWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAKNPVNGKRWWLKAEDPFQ 554 Query: 1576 CLAACMNLSDSLRSSSPYTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPA 1397 CLAAC+NLS++L S+SP+TVISHLPIHQDGSCNGLQHYAALGRD+LEAAAVNL+A E+P+ Sbjct: 555 CLAACINLSEALNSASPHTVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAAEKPS 614 Query: 1396 DVYSEIAARVHDIMKRDCSKDPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAR 1217 DVYSEIA RVH+I++RD +KDPAT+ A LA +L+DQVDRKLVKQTVMTSVYGVTYVGAR Sbjct: 615 DVYSEIAVRVHEIIRRDSNKDPATNPHALLAKILVDQVDRKLVKQTVMTSVYGVTYVGAR 674 Query: 1216 EQIKRRLMERGNITDDRLLFSASCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENE 1037 EQIKRRL E+G+ITDDRLLFSA+CY AKVT+TALGE+FQAAR IM WLGDCAK+IASE++ Sbjct: 675 EQIKRRLEEKGHITDDRLLFSAACYTAKVTLTALGELFQAARDIMSWLGDCAKIIASEDQ 734 Query: 1036 PVRWTTPLGLPVVQPYRKPERHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGS 857 PV+WTTPLGLPVVQPY K ERHLI+TSLQ+LALQREG SV V+KQ++AFPPNFVHSLDGS Sbjct: 735 PVQWTTPLGLPVVQPYYKTERHLIKTSLQILALQREGSSVQVRKQRTAFPPNFVHSLDGS 794 Query: 856 HMMMTAVACRDAGLHFAGVHDSFWTHACDVDKMNLILREKFVELYNMPILENLLESFQTS 677 HMMMTAVACRDAGL FAGVHDSFWTHA DVD MN ILREKFVELYNMPILENLLE FQTS Sbjct: 795 HMMMTAVACRDAGLCFAGVHDSFWTHATDVDLMNRILREKFVELYNMPILENLLEDFQTS 854 Query: 676 FPTLSFPPLPDRGDFDLENVHESPYFFN 593 +PTL FPPLP+RG+FDL+ V SPYFFN Sbjct: 855 YPTLQFPPLPERGNFDLQKVLRSPYFFN 882 Score = 130 bits (328), Expect(2) = 0.0 Identities = 61/75 (81%), Positives = 66/75 (88%), Gaps = 1/75 (1%) Frame = -3 Query: 1961 RERHAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFA 1782 +ERH+QRCD ELKLSVARK+KDEEGFYYPHNLDFRGRAYPMH HL HLSSDLCRGVLEF Sbjct: 429 QERHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVLEFE 488 Query: 1781 EGRPLRKA-QSWLAL 1740 EGRPL K+ WL + Sbjct: 489 EGRPLGKSGLRWLKI 503 >ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Solanum lycopersicum] Length = 1007 Score = 650 bits (1676), Expect(2) = 0.0 Identities = 311/388 (80%), Positives = 353/388 (90%) Frame = -1 Query: 1756 KAGLRWPKIHLANLYAGGVDKLPYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQ 1577 K+GLRW K+HLA+LYAGG++KL Y+ R+ FV+NH+DDILDSA P++G RWWL+AEDP Q Sbjct: 620 KSGLRWLKVHLASLYAGGIEKLCYDARIAFVENHIDDILDSAHNPLNGNRWWLNAEDPLQ 679 Query: 1576 CLAACMNLSDSLRSSSPYTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPA 1397 CLAAC+NLS++++S SP+TVISHLPIHQDGSCNGLQHYAALGRDS+EAAAVNL+AGE+PA Sbjct: 680 CLAACINLSEAVKSLSPHTVISHLPIHQDGSCNGLQHYAALGRDSMEAAAVNLVAGEKPA 739 Query: 1396 DVYSEIAARVHDIMKRDCSKDPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAR 1217 DVY+EIA RV I++ D +KDPAT A LA LLIDQVDRKLVKQTVMTSVYGVTYVGAR Sbjct: 740 DVYTEIALRVDHIIRGDSTKDPATDPNALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAR 799 Query: 1216 EQIKRRLMERGNITDDRLLFSASCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENE 1037 EQIKRRL E+G I DDRLLF+ASCYAAKVT+ ALGE+FQAAR M WLGDCAKVIASEN+ Sbjct: 800 EQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTWLGDCAKVIASENQ 859 Query: 1036 PVRWTTPLGLPVVQPYRKPERHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGS 857 PVRWTTPLGLPVVQPY K +RH+IRTSLQVLALQREGD+V+V+KQ++AFPPNFVHSLDGS Sbjct: 860 PVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDAVEVRKQRTAFPPNFVHSLDGS 919 Query: 856 HMMMTAVACRDAGLHFAGVHDSFWTHACDVDKMNLILREKFVELYNMPILENLLESFQTS 677 HMMMTAVACRDAGLHFAGVHDSFWTHACDVD+MN ILREKFVELY+MPILE+LLESFQ S Sbjct: 920 HMMMTAVACRDAGLHFAGVHDSFWTHACDVDQMNRILREKFVELYSMPILEDLLESFQES 979 Query: 676 FPTLSFPPLPDRGDFDLENVHESPYFFN 593 +P L+FPPLP RGDFDL V ESPYFFN Sbjct: 980 YPALTFPPLPKRGDFDLREVLESPYFFN 1007 Score = 130 bits (327), Expect(2) = 0.0 Identities = 58/68 (85%), Positives = 64/68 (94%) Frame = -3 Query: 1961 RERHAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFA 1782 +E H+QRCD ELKLSVARK++DEEGFYYPHNLDFRGRAYPMH HLNHLSSDLCRG+LEFA Sbjct: 554 QELHSQRCDTELKLSVARKLRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFA 613 Query: 1781 EGRPLRKA 1758 EGRPL K+ Sbjct: 614 EGRPLGKS 621 >sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic; AltName: Full=NsRpoT-C; AltName: Full=T7 bacteriophage-type single subunit RNA polymerase 3; Flags: Precursor gi|59800203|sp|P69243.1|RPO3A_TOBAC RecName: Full=DNA-directed RNA polymerase 3A, chloroplastic; AltName: Full=NictaRpoT3-syl; AltName: Full=T7 bacteriophage-type single subunit RNA polymerase 3A; Flags: Precursor gi|21425641|emb|CAC82576.3| phage-type RNA polymerase [Nicotiana sylvestris] gi|21425679|emb|CAC95027.2| plastid RNA polymerase [Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana sylvestris] Length = 977 Score = 648 bits (1671), Expect(2) = 0.0 Identities = 312/388 (80%), Positives = 352/388 (90%) Frame = -1 Query: 1756 KAGLRWPKIHLANLYAGGVDKLPYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQ 1577 K+GLRW KIHLA+LYAGG++KL Y+ R+ FV+NH+DDILDSA P++G RWWL+AEDPFQ Sbjct: 590 KSGLRWLKIHLASLYAGGIEKLCYDARLAFVENHIDDILDSANNPLNGNRWWLNAEDPFQ 649 Query: 1576 CLAACMNLSDSLRSSSPYTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPA 1397 CLAAC+NLS++L+SSSP+TV SHLPIHQDGSCNGLQHYAALGRDS+EAAAVNL+AG++PA Sbjct: 650 CLAACINLSEALKSSSPHTVFSHLPIHQDGSCNGLQHYAALGRDSMEAAAVNLVAGDKPA 709 Query: 1396 DVYSEIAARVHDIMKRDCSKDPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAR 1217 DVY+EIA RV I++ D KDPAT A LA LLIDQVDRKLVKQTVMTSVYGVTYVGAR Sbjct: 710 DVYTEIALRVDHIIRGDSIKDPATDPNALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAR 769 Query: 1216 EQIKRRLMERGNITDDRLLFSASCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENE 1037 EQIKRRL E+G I DDRLLF+ASCYAAKVT+ ALGE+FQAAR M WLGDCAKVIASEN+ Sbjct: 770 EQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTWLGDCAKVIASENQ 829 Query: 1036 PVRWTTPLGLPVVQPYRKPERHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGS 857 PVRWTTPLGLPVVQPY K +RH+IRTSLQVLALQREGD+V+V+KQ++AFPPNFVHSLDGS Sbjct: 830 PVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDTVEVRKQRTAFPPNFVHSLDGS 889 Query: 856 HMMMTAVACRDAGLHFAGVHDSFWTHACDVDKMNLILREKFVELYNMPILENLLESFQTS 677 HMMMTAVACRDAGL FAGVHDSFWTHACDVD+MN ILREKFVELY+MPILE+LLESFQ S Sbjct: 890 HMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKFVELYSMPILEDLLESFQNS 949 Query: 676 FPTLSFPPLPDRGDFDLENVHESPYFFN 593 +P L+FPPLP RGDFDL V ESPYFFN Sbjct: 950 YPALTFPPLPKRGDFDLVEVLESPYFFN 977 Score = 132 bits (331), Expect(2) = 0.0 Identities = 61/75 (81%), Positives = 67/75 (89%), Gaps = 1/75 (1%) Frame = -3 Query: 1961 RERHAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFA 1782 +E H+QRCD ELKLSVARK+KDEEGFYYPHNLDFRGRAYPMH HLNHLSSDLCRG+LEFA Sbjct: 524 QELHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFA 583 Query: 1781 EGRPLRKA-QSWLAL 1740 EGRPL K+ WL + Sbjct: 584 EGRPLGKSGLRWLKI 598 >ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Populus trichocarpa] gi|222854390|gb|EEE91937.1| hypothetical protein POPTR_0006s19490g [Populus trichocarpa] Length = 982 Score = 647 bits (1668), Expect(2) = 0.0 Identities = 310/388 (79%), Positives = 354/388 (91%) Frame = -1 Query: 1756 KAGLRWPKIHLANLYAGGVDKLPYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQ 1577 K+GL W KIHLANLY+GGV+KL ++ R+ FV+NHL +I DSA+ P++GKRWWL+AEDPFQ Sbjct: 595 KSGLCWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAENPVNGKRWWLTAEDPFQ 654 Query: 1576 CLAACMNLSDSLRSSSPYTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPA 1397 CLAAC+NLS++L+S+SP+TVISHLPIHQDGSCNGLQHYAALGRDS EAAAVNL+A E+P+ Sbjct: 655 CLAACINLSEALKSASPHTVISHLPIHQDGSCNGLQHYAALGRDSQEAAAVNLVAAEKPS 714 Query: 1396 DVYSEIAARVHDIMKRDCSKDPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAR 1217 DVYSEIA RVH+I++RD +KDPAT+ A LA +LID+VDRKLVKQTVMTSVYGVTYVGAR Sbjct: 715 DVYSEIATRVHEIIRRDSNKDPATNPHALLAKVLIDEVDRKLVKQTVMTSVYGVTYVGAR 774 Query: 1216 EQIKRRLMERGNITDDRLLFSASCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENE 1037 EQIKRRL E+G+ITDDR+LFSA+CYAAKVT+TALGE+FQAAR IMGWLGDCAKVIASE++ Sbjct: 775 EQIKRRLEEKGHITDDRVLFSAACYAAKVTLTALGELFQAARDIMGWLGDCAKVIASEDQ 834 Query: 1036 PVRWTTPLGLPVVQPYRKPERHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGS 857 PVRWTTPLGLPVVQPY K +RHLIRTSLQVLALQREG SV V+KQ++AFPPNFVHSLDGS Sbjct: 835 PVRWTTPLGLPVVQPYYKTQRHLIRTSLQVLALQREGSSVQVRKQRTAFPPNFVHSLDGS 894 Query: 856 HMMMTAVACRDAGLHFAGVHDSFWTHACDVDKMNLILREKFVELYNMPILENLLESFQTS 677 HMMMTAVACRDA L FAGVHDSFWTHA D D MN ILREKFVELYNMPILENLLE FQTS Sbjct: 895 HMMMTAVACRDADLRFAGVHDSFWTHARDADLMNRILREKFVELYNMPILENLLEDFQTS 954 Query: 676 FPTLSFPPLPDRGDFDLENVHESPYFFN 593 +PTL FP LP+RG+FDL+ V SPYFFN Sbjct: 955 YPTLKFPSLPERGNFDLQEVLRSPYFFN 982 Score = 132 bits (333), Expect(2) = 0.0 Identities = 62/75 (82%), Positives = 67/75 (89%), Gaps = 1/75 (1%) Frame = -3 Query: 1961 RERHAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFA 1782 +ERH+QRCD ELKLSVARK+KDEEGFYYPHNLDFRGRAYPMH HL HLSSDLCRGVLEFA Sbjct: 529 QERHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVLEFA 588 Query: 1781 EGRPLRKA-QSWLAL 1740 EGRPL K+ WL + Sbjct: 589 EGRPLGKSGLCWLKI 603 >emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea] Length = 989 Score = 639 bits (1649), Expect(2) = 0.0 Identities = 306/388 (78%), Positives = 348/388 (89%) Frame = -1 Query: 1756 KAGLRWPKIHLANLYAGGVDKLPYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQ 1577 K GL W KIHLAN+YAGGVDKL YE R FV+NHL+++ DSA PI+G RWWLSAEDPFQ Sbjct: 602 KTGLHWLKIHLANVYAGGVDKLSYEARAAFVENHLEEVFDSATNPINGNRWWLSAEDPFQ 661 Query: 1576 CLAACMNLSDSLRSSSPYTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPA 1397 CLAAC++L+ +L SSSP++ IS+LPIHQDGSCNGLQHYAALGRDS EAAAVNL+AGE PA Sbjct: 662 CLAACIDLTGALNSSSPHSFISYLPIHQDGSCNGLQHYAALGRDSKEAAAVNLVAGEEPA 721 Query: 1396 DVYSEIAARVHDIMKRDCSKDPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAR 1217 DVYSEIA RV +IM++D KDP T A LA +L+DQVDRKLVKQTVMTSVYGVT+VGAR Sbjct: 722 DVYSEIAVRVREIMEKDSRKDPKTDPHAVLAKVLVDQVDRKLVKQTVMTSVYGVTFVGAR 781 Query: 1216 EQIKRRLMERGNITDDRLLFSASCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENE 1037 EQIKRRL E+G ITDDRLLFSA+CY+AKVTM+ALG++FQAAR IM WLGDCAKVIASEN+ Sbjct: 782 EQIKRRLEEKGVITDDRLLFSAACYSAKVTMSALGQLFQAARGIMDWLGDCAKVIASENQ 841 Query: 1036 PVRWTTPLGLPVVQPYRKPERHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGS 857 PVRWTTPLGLPVVQPY K +RHLI+TSLQVLALQ+EG+ ++VKKQ++AFPPN+VHSLDG+ Sbjct: 842 PVRWTTPLGLPVVQPYCKSKRHLIKTSLQVLALQQEGEGIEVKKQRTAFPPNYVHSLDGT 901 Query: 856 HMMMTAVACRDAGLHFAGVHDSFWTHACDVDKMNLILREKFVELYNMPILENLLESFQTS 677 HMMMTAVACRDAGL FAGVHDSFWTHACDV+KMN ILR KFVELYNMPILENLLESFQT+ Sbjct: 902 HMMMTAVACRDAGLQFAGVHDSFWTHACDVEKMNQILRVKFVELYNMPILENLLESFQTA 961 Query: 676 FPTLSFPPLPDRGDFDLENVHESPYFFN 593 +P +FPPLP+RGDFDLE V ESPYFFN Sbjct: 962 YPASTFPPLPERGDFDLEEVLESPYFFN 989 Score = 133 bits (334), Expect(2) = 0.0 Identities = 62/75 (82%), Positives = 66/75 (88%), Gaps = 1/75 (1%) Frame = -3 Query: 1961 RERHAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFA 1782 RERHA RCD+ELK+SVA+KMKDEEGFYYPHNLDFRGRAYPMH HLNHLSSDLCRGVLEFA Sbjct: 536 RERHALRCDVELKISVAQKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFA 595 Query: 1781 EGRPLRK-AQSWLAL 1740 GRPL K WL + Sbjct: 596 SGRPLGKTGLHWLKI 610 >sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic; AltName: Full=NictaRpoT3-tom; AltName: Full=T7 bacteriophage-type single subunit RNA polymerase 3B; Flags: Precursor gi|21425667|emb|CAC95021.2| chloroplast RNA polymerase [Nicotiana tabacum] Length = 977 Score = 639 bits (1649), Expect(2) = 0.0 Identities = 308/388 (79%), Positives = 350/388 (90%) Frame = -1 Query: 1756 KAGLRWPKIHLANLYAGGVDKLPYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQ 1577 K+GLRW KIHLA+LYAGGV+KL Y+ R+ FV+NH+ DILDSA P++G RWWL+AEDPFQ Sbjct: 590 KSGLRWLKIHLASLYAGGVEKLCYDARLAFVENHIHDILDSANNPLNGNRWWLNAEDPFQ 649 Query: 1576 CLAACMNLSDSLRSSSPYTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPA 1397 CLAAC+NLS++L+SSSP+TVISHLPIHQDGSCNGLQHYAALGRDS+EAAAVNL+AGE+PA Sbjct: 650 CLAACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRDSMEAAAVNLVAGEKPA 709 Query: 1396 DVYSEIAARVHDIMKRDCSKDPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAR 1217 DVY+EIA RV I++ D KDPA A LA LLIDQVDRKLVKQTVMTSVYGVTYVGAR Sbjct: 710 DVYTEIALRVDHIIRGDSIKDPAIDPNALLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAR 769 Query: 1216 EQIKRRLMERGNITDDRLLFSASCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENE 1037 EQIKRRL E+G I DDRLLF+ASCYAAKVT+ ALGE+FQAAR M WLGDCAKVIA EN+ Sbjct: 770 EQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTWLGDCAKVIALENQ 829 Query: 1036 PVRWTTPLGLPVVQPYRKPERHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGS 857 PVRWTTPLGLPVVQPY K +RH+IRTSLQ+LALQREGD+V+V+KQ++AFPPNFVHSLDGS Sbjct: 830 PVRWTTPLGLPVVQPYFKTQRHVIRTSLQILALQREGDAVEVRKQRTAFPPNFVHSLDGS 889 Query: 856 HMMMTAVACRDAGLHFAGVHDSFWTHACDVDKMNLILREKFVELYNMPILENLLESFQTS 677 HMMMTAVACRDAGL FAGVHDSFWTHACDVD+MN ILREKFVELY++PILE+LLE+FQ S Sbjct: 890 HMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKFVELYSLPILEDLLENFQKS 949 Query: 676 FPTLSFPPLPDRGDFDLENVHESPYFFN 593 +P L+FPPLP RGDF+L V ESPYFFN Sbjct: 950 YPALTFPPLPKRGDFNLREVLESPYFFN 977 Score = 132 bits (331), Expect(2) = 0.0 Identities = 61/75 (81%), Positives = 67/75 (89%), Gaps = 1/75 (1%) Frame = -3 Query: 1961 RERHAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFA 1782 +E H+QRCD ELKLSVARK+KDEEGFYYPHNLDFRGRAYPMH HLNHLSSDLCRG+LEFA Sbjct: 524 QELHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFA 583 Query: 1781 EGRPLRKA-QSWLAL 1740 EGRPL K+ WL + Sbjct: 584 EGRPLGKSGLRWLKI 598 >ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thaliana] gi|3914826|sp|O24600.1|RPOT3_ARATH RecName: Full=DNA-directed RNA polymerase 3, chloroplastic; Flags: Precursor gi|2330560|emb|CAA69972.1| chloroplast single-subunit DNA-dependent RNA polymerase [Arabidopsis thaliana] gi|2330564|emb|CAA69717.1| chloroplast single-subunit DNA-dependent RNA polymerase [Arabidopsis thaliana] gi|4115372|gb|AAD03373.1| chloroplast single subunit DNA-dependent RNA polymerase [Arabidopsis thaliana] gi|110739160|dbj|BAF01496.1| chloroplast single subunit DNA-dependent RNA polymerase [Arabidopsis thaliana] gi|330252437|gb|AEC07531.1| DNA-directed RNA polymerase 3 [Arabidopsis thaliana] Length = 993 Score = 634 bits (1635), Expect(2) = 0.0 Identities = 301/388 (77%), Positives = 350/388 (90%) Frame = -1 Query: 1756 KAGLRWPKIHLANLYAGGVDKLPYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQ 1577 K+GL W KIHLANLYAGGV+KL ++ R+ FV+NHLDDI+DSA+ PI GKRWWL AEDPFQ Sbjct: 606 KSGLHWLKIHLANLYAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQ 665 Query: 1576 CLAACMNLSDSLRSSSPYTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPA 1397 CLAAC+ L+ +L+S SPY+VISHLPIHQDGSCNGLQHYAALGRDS EAAAVNL+AGE+PA Sbjct: 666 CLAACVILTQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPA 725 Query: 1396 DVYSEIAARVHDIMKRDCSKDPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAR 1217 DVYSEI+ RVH+IMK+D SKDP ++ A LA +LI QVDRKLVKQTVMTSVYGVTYVGAR Sbjct: 726 DVYSEISRRVHEIMKKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAR 785 Query: 1216 EQIKRRLMERGNITDDRLLFSASCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENE 1037 EQIKRRL E+G ITD+R+LF+A+CY+AKVT+ ALGE+F+AAR+IM WLGDCAK+IAS+N Sbjct: 786 EQIKRRLEEKGVITDERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNH 845 Query: 1036 PVRWTTPLGLPVVQPYRKPERHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGS 857 PVRW TPLGLPVVQPY + ERHLIRTSLQVLALQREG++VDV+KQ++AFPPNFVHSLDG+ Sbjct: 846 PVRWITPLGLPVVQPYCRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGT 905 Query: 856 HMMMTAVACRDAGLHFAGVHDSFWTHACDVDKMNLILREKFVELYNMPILENLLESFQTS 677 HMMMTAVACR+AGL+FAGVHDS+WTHACDVD MN ILREKFVELYN PILE+LL+SFQ S Sbjct: 906 HMMMTAVACREAGLNFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQES 965 Query: 676 FPTLSFPPLPDRGDFDLENVHESPYFFN 593 +P L FPP+P RGDFDL+ V +S YFFN Sbjct: 966 YPNLVFPPVPKRGDFDLKEVLKSQYFFN 993 Score = 135 bits (339), Expect(2) = 0.0 Identities = 63/75 (84%), Positives = 67/75 (89%), Gaps = 1/75 (1%) Frame = -3 Query: 1961 RERHAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFA 1782 RERH+ RCD+ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMH HLNHLSSDLCRG LEFA Sbjct: 540 RERHSLRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFA 599 Query: 1781 EGRPLRKA-QSWLAL 1740 EGRPL K+ WL + Sbjct: 600 EGRPLGKSGLHWLKI 614 >ref|XP_002880548.1| PDE319/SCA3 [Arabidopsis lyrata subsp. lyrata] gi|297326387|gb|EFH56807.1| PDE319/SCA3 [Arabidopsis lyrata subsp. lyrata] Length = 990 Score = 634 bits (1634), Expect(2) = 0.0 Identities = 301/388 (77%), Positives = 350/388 (90%) Frame = -1 Query: 1756 KAGLRWPKIHLANLYAGGVDKLPYEERVMFVDNHLDDILDSAQRPIDGKRWWLSAEDPFQ 1577 K+GL W KIHLANL+AGGV+KL ++ R+ FV+NHLDDI+DSA+ PI GKRWWL AEDPFQ Sbjct: 603 KSGLHWLKIHLANLFAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQ 662 Query: 1576 CLAACMNLSDSLRSSSPYTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLIAGERPA 1397 CLAAC+ L+ +LRS SPY+VISHLPIHQDGSCNGLQHYAALGRDS EAAAVNL+AGE+PA Sbjct: 663 CLAACVILTQALRSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPA 722 Query: 1396 DVYSEIAARVHDIMKRDCSKDPATHSAARLANLLIDQVDRKLVKQTVMTSVYGVTYVGAR 1217 DVYSEI+ RVH+IMK+D SKDP ++ A LA +LI QVDRKLVKQTVMTSVYGVTYVGAR Sbjct: 723 DVYSEISRRVHEIMKKDSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAR 782 Query: 1216 EQIKRRLMERGNITDDRLLFSASCYAAKVTMTALGEMFQAARSIMGWLGDCAKVIASENE 1037 EQIKRRL E+G ITD+R+LF+A+CY+AKVT+ ALGE+F+AAR+IM WLGDCAK+IAS+N Sbjct: 783 EQIKRRLEEKGVITDERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNH 842 Query: 1036 PVRWTTPLGLPVVQPYRKPERHLIRTSLQVLALQREGDSVDVKKQKSAFPPNFVHSLDGS 857 PVRW TPLGLPVVQPY + ERHLIRTSLQVLALQREG++VDV+KQ++AFPPNFVHSLDG+ Sbjct: 843 PVRWITPLGLPVVQPYCRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGT 902 Query: 856 HMMMTAVACRDAGLHFAGVHDSFWTHACDVDKMNLILREKFVELYNMPILENLLESFQTS 677 HMMMTAVACR+AGL+FAGVHDS+WTHACDVD MN ILREKFVELYN PILE+LL+SFQ S Sbjct: 903 HMMMTAVACREAGLNFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQES 962 Query: 676 FPTLSFPPLPDRGDFDLENVHESPYFFN 593 +P L FPP+P RGDFDL+ V +S YFFN Sbjct: 963 YPNLVFPPVPKRGDFDLKEVLKSQYFFN 990 Score = 135 bits (339), Expect(2) = 0.0 Identities = 63/75 (84%), Positives = 67/75 (89%), Gaps = 1/75 (1%) Frame = -3 Query: 1961 RERHAQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGVLEFA 1782 RERH+ RCD+ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMH HLNHLSSDLCRG LEFA Sbjct: 537 RERHSLRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFA 596 Query: 1781 EGRPLRKA-QSWLAL 1740 EGRPL K+ WL + Sbjct: 597 EGRPLGKSGLHWLKI 611