BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00029931
         (777 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD ...   152   1e-34
emb|CBI32760.3| unnamed protein product [Vitis vinifera]              152   1e-34
ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citr...   144   5e-32
ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citr...   144   5e-32
ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citr...   144   5e-32
ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF,...   142   1e-31
ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF,...   142   1e-31
ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF,...   142   1e-31
ref|XP_007027376.1| RNA polymerase sigma factor rpoD, putative [...   142   1e-31
ref|XP_007204994.1| hypothetical protein PRUPE_ppa003513mg [Prun...   132   1e-28
ref|XP_003542550.1| PREDICTED: RNA polymerase sigma factor sigF,...   132   2e-28
ref|XP_006827418.1| hypothetical protein AMTR_s00009p00072720 [A...   131   2e-28
ref|XP_006588793.1| PREDICTED: RNA polymerase sigma factor sigF,...   123   8e-26
gb|EXC16188.1| RNA polymerase sigma factor rpoD [Morus notabilis]     119   9e-25
ref|NP_565856.1| RNA polymerase sigma factor sigF [Arabidopsis t...   119   2e-24
gb|EYU34473.1| hypothetical protein MIMGU_mgv1a003862mg [Mimulus...   117   6e-24
ref|XP_004304450.1| PREDICTED: RNA polymerase sigma factor sigF,...   116   8e-24
ref|XP_006354351.1| PREDICTED: RNA polymerase sigma factor sigF,...   116   1e-23
ref|XP_006410876.1| hypothetical protein EUTSA_v10016472mg [Eutr...   116   1e-23
ref|XP_007144359.1| hypothetical protein PHAVU_007G149600g [Phas...   115   1e-23

>ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
          Length = 572

 Score =  152 bits (384), Expect = 1e-34
 Identities = 106/231 (45%), Positives = 142/231 (61%), Gaps = 8/231 (3%)
 Frame = -3

Query: 670 RHFPASVL-QEQRDDLRSLLH-LREEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYL 497
           R FP SVL QEQRD+ R     L++E+ ++  L++ Q++   S ++E     S+  ++Y+
Sbjct: 58  RKFPTSVLLQEQRDEYRPFPQALKDERTFQATLEKRQMEIVVSADEEN----SDDHNQYM 113

Query: 496 KDFERQLLYSPGLWYLSPPSQRENKA--SSLDMQSMSSDADEELHVKACDLLALAKQAVL 323
            +FERQLL  PGLWY  P SQ   K+  SS  M+S+++D +  + VK CD+LALAK+A+ 
Sbjct: 114 VNFERQLLLQPGLWYSLPSSQTGEKSPFSSSIMKSITTDIENSMDVKPCDVLALAKKALS 173

Query: 322 VSKQASSLIVASNSHLHNAN-ELIPSFGMNDISPPE---KEKIVRSTRLLERQSKKRRAP 155
            SKQA SL    N+ L  A+ E  PS  +  IS P    +EK VRSTRLLER+SKKRR P
Sbjct: 174 ASKQAVSLY--ENAKLLGADLEDSPSPSLGAISSPNLPLEEKTVRSTRLLERRSKKRRNP 231

Query: 154 KSALLGDEISSLRTTDKHHKTSLIDLSDPLRLFLSGAEARQLLTAKEEKEL 2
           K A + +   S R   +       D  DPLRLFL G E R+LLTAKEE EL
Sbjct: 232 KVA-VHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESEL 281


>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score =  152 bits (384), Expect = 1e-34
 Identities = 106/231 (45%), Positives = 142/231 (61%), Gaps = 8/231 (3%)
 Frame = -3

Query: 670 RHFPASVL-QEQRDDLRSLLH-LREEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYL 497
           R FP SVL QEQRD+ R     L++E+ ++  L++ Q++   S ++E     S+  ++Y+
Sbjct: 47  RKFPTSVLLQEQRDEYRPFPQALKDERTFQATLEKRQMEIVVSADEEN----SDDHNQYM 102

Query: 496 KDFERQLLYSPGLWYLSPPSQRENKA--SSLDMQSMSSDADEELHVKACDLLALAKQAVL 323
            +FERQLL  PGLWY  P SQ   K+  SS  M+S+++D +  + VK CD+LALAK+A+ 
Sbjct: 103 VNFERQLLLQPGLWYSLPSSQTGEKSPFSSSIMKSITTDIENSMDVKPCDVLALAKKALS 162

Query: 322 VSKQASSLIVASNSHLHNAN-ELIPSFGMNDISPPE---KEKIVRSTRLLERQSKKRRAP 155
            SKQA SL    N+ L  A+ E  PS  +  IS P    +EK VRSTRLLER+SKKRR P
Sbjct: 163 ASKQAVSLY--ENAKLLGADLEDSPSPSLGAISSPNLPLEEKTVRSTRLLERRSKKRRNP 220

Query: 154 KSALLGDEISSLRTTDKHHKTSLIDLSDPLRLFLSGAEARQLLTAKEEKEL 2
           K A + +   S R   +       D  DPLRLFL G E R+LLTAKEE EL
Sbjct: 221 KVA-VHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESEL 270


>ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
           gi|557530789|gb|ESR41972.1| hypothetical protein
           CICLE_v10011376mg [Citrus clementina]
          Length = 561

 Score =  144 bits (362), Expect = 5e-32
 Identities = 98/227 (43%), Positives = 134/227 (59%), Gaps = 4/227 (1%)
 Frame = -3

Query: 670 RHFPASVL-QEQRDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYL 497
           RHFP SVL QEQRD+ R LLH+ +E+K  +   D   ++ +    +EK    S   D+ +
Sbjct: 49  RHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKN---SGDLDQLV 105

Query: 496 KDFERQLLYSPGLWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLV 320
           +D E Q L+ P LW LSPP +R E+ + SL MQS+S+D +E +  +  D +ALA++A+  
Sbjct: 106 QDLEHQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSA 165

Query: 319 SKQASSLIVASNSHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALL 140
           SK+A+SL  A N  L+ A     S   +   P E+ K VRSTR LER+SKKR+  K  + 
Sbjct: 166 SKEAASL--AENPKLNGAEFTDISLTSSLGYPLEEVKTVRSTRFLERRSKKRKVSKPKVT 223

Query: 139 GDEISSLRTTDKHHKTSL-IDLSDPLRLFLSGAEARQLLTAKEEKEL 2
             E  + R      K S   D +DPLRLFL G E R+LLTA EE EL
Sbjct: 224 NHETYNSRKASVKKKLSEGFDPNDPLRLFLWGPETRKLLTADEEFEL 270


>ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
           gi|557530788|gb|ESR41971.1| hypothetical protein
           CICLE_v10011376mg [Citrus clementina]
          Length = 569

 Score =  144 bits (362), Expect = 5e-32
 Identities = 98/227 (43%), Positives = 134/227 (59%), Gaps = 4/227 (1%)
 Frame = -3

Query: 670 RHFPASVL-QEQRDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYL 497
           RHFP SVL QEQRD+ R LLH+ +E+K  +   D   ++ +    +EK    S   D+ +
Sbjct: 57  RHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKN---SGDLDQLV 113

Query: 496 KDFERQLLYSPGLWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLV 320
           +D E Q L+ P LW LSPP +R E+ + SL MQS+S+D +E +  +  D +ALA++A+  
Sbjct: 114 QDLEHQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSA 173

Query: 319 SKQASSLIVASNSHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALL 140
           SK+A+SL  A N  L+ A     S   +   P E+ K VRSTR LER+SKKR+  K  + 
Sbjct: 174 SKEAASL--AENPKLNGAEFTDISLTSSLGYPLEEVKTVRSTRFLERRSKKRKVSKPKVT 231

Query: 139 GDEISSLRTTDKHHKTSL-IDLSDPLRLFLSGAEARQLLTAKEEKEL 2
             E  + R      K S   D +DPLRLFL G E R+LLTA EE EL
Sbjct: 232 NHETYNSRKASVKKKLSEGFDPNDPLRLFLWGPETRKLLTADEEFEL 278


>ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
           gi|557530787|gb|ESR41970.1| hypothetical protein
           CICLE_v10011376mg [Citrus clementina]
          Length = 558

 Score =  144 bits (362), Expect = 5e-32
 Identities = 98/227 (43%), Positives = 134/227 (59%), Gaps = 4/227 (1%)
 Frame = -3

Query: 670 RHFPASVL-QEQRDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYL 497
           RHFP SVL QEQRD+ R LLH+ +E+K  +   D   ++ +    +EK    S   D+ +
Sbjct: 46  RHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKN---SGDLDQLV 102

Query: 496 KDFERQLLYSPGLWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLV 320
           +D E Q L+ P LW LSPP +R E+ + SL MQS+S+D +E +  +  D +ALA++A+  
Sbjct: 103 QDLEHQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSA 162

Query: 319 SKQASSLIVASNSHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALL 140
           SK+A+SL  A N  L+ A     S   +   P E+ K VRSTR LER+SKKR+  K  + 
Sbjct: 163 SKEAASL--AENPKLNGAEFTDISLTSSLGYPLEEVKTVRSTRFLERRSKKRKVSKPKVT 220

Query: 139 GDEISSLRTTDKHHKTSL-IDLSDPLRLFLSGAEARQLLTAKEEKEL 2
             E  + R      K S   D +DPLRLFL G E R+LLTA EE EL
Sbjct: 221 NHETYNSRKASVKKKLSEGFDPNDPLRLFLWGPETRKLLTADEEFEL 267


>ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           isoform X3 [Citrus sinensis]
          Length = 561

 Score =  142 bits (359), Expect = 1e-31
 Identities = 97/227 (42%), Positives = 134/227 (59%), Gaps = 4/227 (1%)
 Frame = -3

Query: 670 RHFPASVL-QEQRDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYL 497
           RHFP SVL QEQRD+ R LLH+ +E+K  +   D   ++ +    +EK    S   D+ +
Sbjct: 49  RHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKN---SGDLDQLV 105

Query: 496 KDFERQLLYSPGLWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLV 320
           +D E Q L+ P LW LSPP +R E+ + SL MQS+S+D +E +  +  D +ALA++A+  
Sbjct: 106 QDLEHQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSA 165

Query: 319 SKQASSLIVASNSHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALL 140
           SK+A+SL  A N  L+ A     S   +   P E+ K VRST+ LER+SKKR+  K  + 
Sbjct: 166 SKEAASL--AENPKLNGAEFTDISLTSSLGYPLEEVKTVRSTQFLERRSKKRKVSKPKVT 223

Query: 139 GDEISSLRTTDKHHKTSL-IDLSDPLRLFLSGAEARQLLTAKEEKEL 2
             E  + R      K S   D +DPLRLFL G E R+LLTA EE EL
Sbjct: 224 NHETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFEL 270


>ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           isoform X2 [Citrus sinensis]
          Length = 569

 Score =  142 bits (359), Expect = 1e-31
 Identities = 97/227 (42%), Positives = 134/227 (59%), Gaps = 4/227 (1%)
 Frame = -3

Query: 670 RHFPASVL-QEQRDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYL 497
           RHFP SVL QEQRD+ R LLH+ +E+K  +   D   ++ +    +EK    S   D+ +
Sbjct: 57  RHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKN---SGDLDQLV 113

Query: 496 KDFERQLLYSPGLWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLV 320
           +D E Q L+ P LW LSPP +R E+ + SL MQS+S+D +E +  +  D +ALA++A+  
Sbjct: 114 QDLEHQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSA 173

Query: 319 SKQASSLIVASNSHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALL 140
           SK+A+SL  A N  L+ A     S   +   P E+ K VRST+ LER+SKKR+  K  + 
Sbjct: 174 SKEAASL--AENPKLNGAEFTDISLTSSLGYPLEEVKTVRSTQFLERRSKKRKVSKPKVT 231

Query: 139 GDEISSLRTTDKHHKTSL-IDLSDPLRLFLSGAEARQLLTAKEEKEL 2
             E  + R      K S   D +DPLRLFL G E R+LLTA EE EL
Sbjct: 232 NHETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFEL 278


>ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           isoform X1 [Citrus sinensis]
          Length = 570

 Score =  142 bits (359), Expect = 1e-31
 Identities = 97/227 (42%), Positives = 134/227 (59%), Gaps = 4/227 (1%)
 Frame = -3

Query: 670 RHFPASVL-QEQRDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYL 497
           RHFP SVL QEQRD+ R LLH+ +E+K  +   D   ++ +    +EK    S   D+ +
Sbjct: 58  RHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKN---SGDLDQLV 114

Query: 496 KDFERQLLYSPGLWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLV 320
           +D E Q L+ P LW LSPP +R E+ + SL MQS+S+D +E +  +  D +ALA++A+  
Sbjct: 115 QDLEHQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSA 174

Query: 319 SKQASSLIVASNSHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALL 140
           SK+A+SL  A N  L+ A     S   +   P E+ K VRST+ LER+SKKR+  K  + 
Sbjct: 175 SKEAASL--AENPKLNGAEFTDISLTSSLGYPLEEVKTVRSTQFLERRSKKRKVSKPKVT 232

Query: 139 GDEISSLRTTDKHHKTSL-IDLSDPLRLFLSGAEARQLLTAKEEKEL 2
             E  + R      K S   D +DPLRLFL G E R+LLTA EE EL
Sbjct: 233 NHETYNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFEL 279


>ref|XP_007027376.1| RNA polymerase sigma factor rpoD, putative [Theobroma cacao]
           gi|508715981|gb|EOY07878.1| RNA polymerase sigma factor
           rpoD, putative [Theobroma cacao]
          Length = 568

 Score =  142 bits (359), Expect = 1e-31
 Identities = 108/255 (42%), Positives = 146/255 (57%), Gaps = 10/255 (3%)
 Frame = -3

Query: 736 SVAVLHEXXXXXXXXXXXXXXTRHFPASVL-QEQRDDLRSL--LHL-REEKPYKTALDRT 569
           SV + HE               RHFP SVL QEQRDD R L  LH  +E+K Y  A D+ 
Sbjct: 31  SVLMFHEQAAPAATSIPITSVARHFPTSVLLQEQRDDYRPLPVLHFFKEDKAYPGATDKQ 90

Query: 568 QIDNDTSLNQEKRERGSEASDKYLK-DFERQLLYSPGLWYL-SPPSQRENKASSLDMQSM 395
           QI+N  SLN+E       AS+ + +  FE++LL  P L  L S     EN +S+ +MQS+
Sbjct: 91  QIENGASLNEEN------ASNNFGQLGFEKKLLQWPDLTQLLSLLESEENPSSTSNMQSV 144

Query: 394 SSDADEELHVKACDLLALAKQAVLVSKQASSLIVASNSHLHNANELIPSFGMNDIS--PP 221
           ++D  E + V+  +++ALAK+A+  SKQA+SL  + +  L   + L  S G  +    P 
Sbjct: 145 AADTKEIVDVEPSNIVALAKKALSASKQAASL--SEDLKLDLDDSLSNSLGSANSCTLPV 202

Query: 220 EKEKIV--RSTRLLERQSKKRRAPKSALLGDEISSLRTTDKHHKTSLIDLSDPLRLFLSG 47
           EKE++V  RSTR LERQSK+RR      + +  SS RT  +   +   D +DPLRLFL G
Sbjct: 203 EKEEVVTVRSTRRLERQSKRRRVQPKVTIRETYSSRRTDVRRKLSEGFDPNDPLRLFLWG 262

Query: 46  AEARQLLTAKEEKEL 2
            E +QLLTAKEE EL
Sbjct: 263 PETKQLLTAKEESEL 277


>ref|XP_007204994.1| hypothetical protein PRUPE_ppa003513mg [Prunus persica]
           gi|462400636|gb|EMJ06193.1| hypothetical protein
           PRUPE_ppa003513mg [Prunus persica]
          Length = 568

 Score =  132 bits (332), Expect = 1e-28
 Identities = 100/264 (37%), Positives = 152/264 (57%), Gaps = 9/264 (3%)
 Frame = -3

Query: 766 KHQLRNAHP-LSVAVLHEXXXXXXXXXXXXXXTRHFPASVL-QEQRDDLRSLLH-LREEK 596
           +H L ++ P  SV +LHE               RHFP SVL QEQRD+ + LLH L+E+K
Sbjct: 21  RHPLPSSSPSTSVLMLHEQAVPAVTSVPITSVARHFPTSVLLQEQRDEFKPLLHVLKEDK 80

Query: 595 PYKTALDRTQIDNDTSLNQEKRERGSEASDKY--LKDFERQLLYSPGLWYLSPPSQRENK 422
             + ALDR QI+   S++++      +  D Y  +   + QLL    L   S        
Sbjct: 81  TSEAALDRMQIETGASVHEDL-----DIDDFYPLVNSSKPQLLNHDILDVFSSLQTGAKP 135

Query: 421 ASSLDMQSMSSDADEELHVKACDLLALAKQAVLVSKQASSLIVASNSHLHNANELIPSFG 242
           ++ L ++S+++ +++ + V+ C+++ALAK+A+  S++A+SL   S S   + ++L  +  
Sbjct: 136 STPLTLESLTTASNKHMDVEPCNVVALAKKALSASREAASLAEDSQSMGADFDDLGYTSL 195

Query: 241 MNDISPPEKEKIVRSTRLLERQSKK---RRAPKSALLGDEISSLRTTDKHHKTSL-IDLS 74
            N I   E+EK VRSTR+LER+ K+   R+ PKS ++G E +S   +D   K S   + +
Sbjct: 196 ANWIV--EEEKTVRSTRILERRRKRIKTRKVPKSKVIGHESNSFTGSDVRKKISEGFNPN 253

Query: 73  DPLRLFLSGAEARQLLTAKEEKEL 2
           DPLRLFL G E RQLLTAKEE EL
Sbjct: 254 DPLRLFLWGPETRQLLTAKEEAEL 277


>ref|XP_003542550.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Glycine
           max]
          Length = 574

 Score =  132 bits (331), Expect = 2e-28
 Identities = 97/272 (35%), Positives = 142/272 (52%), Gaps = 15/272 (5%)
 Frame = -3

Query: 772 PSKHQLRNAHPLS----VAVLHEXXXXXXXXXXXXXXTRHFPASVL-QEQRDDLRSLLHL 608
           P  H   N  PLS    V +L E               ++FPASVL QEQRD+ R LLH+
Sbjct: 16  PRTHHPWNTLPLSSSTSVLMLREQASPTVASWSSNFSAQNFPASVLLQEQRDEYRPLLHM 75

Query: 607 -REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYLKDFERQLLYSPGLWYLSPPSQR 431
            +E+K  +  L   Q+D  T +  E  E  +E +D+ + DF + L Y P L  L   SQ 
Sbjct: 76  SKEDKTSQAMLSTRQMD--TVMVHE--ENNTENADQVVLDFRKHLHYWPHLQNLLASSQT 131

Query: 430 ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLVSKQASSLIVASNSHLHNANELIP 251
              ++S  +Q +SSD D   +   C+ ++LAK+A+  SKQ SS++    S   + + +  
Sbjct: 132 GEISASSTLQQVSSDLDRHTNGVQCNRVSLAKKALSTSKQGSSVVEDLKSIKADDDSIPF 191

Query: 250 SFGMNDISPPE--KEKIVRSTRLLERQSKKRRAPKSALLGDEISSLRTTDKHHKTSL--- 86
                 ++ P   + K VRSTRLLER+SK+R+ PKS ++ DE    R  D H K  +   
Sbjct: 192 GLASTGLADPSIGRNKTVRSTRLLERRSKQRKVPKSKVIDDETYLARKDDAHEKLRVEKK 251

Query: 85  ----IDLSDPLRLFLSGAEARQLLTAKEEKEL 2
               +D +DPL  FL G E +QLLT ++E +L
Sbjct: 252 KNEELDQNDPLCFFLRGPETKQLLTLEQESQL 283


>ref|XP_006827418.1| hypothetical protein AMTR_s00009p00072720 [Amborella trichopoda]
           gi|548832038|gb|ERM94834.1| hypothetical protein
           AMTR_s00009p00072720 [Amborella trichopoda]
          Length = 573

 Score =  131 bits (330), Expect = 2e-28
 Identities = 95/243 (39%), Positives = 129/243 (53%), Gaps = 20/243 (8%)
 Frame = -3

Query: 670 RHFPASV-LQEQRDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYL 497
           RHFPASV L EQRDDLRS     +E+K Y+  +DR + +   S+  E +   +   D+YL
Sbjct: 44  RHFPASVVLHEQRDDLRSPTSSPKEDKAYQEVMDRARTEVYASIGAETK---NFEIDQYL 100

Query: 496 KDFERQLLYSPGLWYLSPPSQRENKASSLDMQSMSSDADEELHVK-------------AC 356
           KDFERQLLY P LWYLSP         SL  Q    + D E  +K               
Sbjct: 101 KDFERQLLYWPALWYLSPSRILPKSLLSLPFQCKPLETDIESEIKESRKKQTNCSSLNPM 160

Query: 355 DLLALAKQAVLVSKQASSLIVASNSHLHNAN-ELIPSFGMND--ISPPEKE--KIVRSTR 191
           D+L LAK+AV+ SK A++L+  S+  + N + ++ P  G+ +  I  P+++    +RS R
Sbjct: 161 DVLVLAKRAVMASKAAAALVEHSDLTVGNPDGDISPCSGLKEICIQVPDEDMRTTIRSKR 220

Query: 190 LLERQSKKRRAPKSALLGDEISSLRTTDKHHKTSLIDLSDPLRLFLSGAEARQLLTAKEE 11
            LERQ K+RR PK          +    +  K    D +DPLR FL G   +QLLT KEE
Sbjct: 221 HLERQIKRRRVPKKLKDFSANFEIGKKPEKVKNKSFDPNDPLRFFLWGPITKQLLTEKEE 280

Query: 10  KEL 2
            EL
Sbjct: 281 SEL 283


>ref|XP_006588793.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           [Glycine max]
          Length = 575

 Score =  123 bits (308), Expect = 8e-26
 Identities = 89/256 (34%), Positives = 134/256 (52%), Gaps = 11/256 (4%)
 Frame = -3

Query: 736 SVAVLHEXXXXXXXXXXXXXXTRHFPASVL-QEQRDDLRSLLHL-REEKPYKTALDRTQI 563
           SV +LHE               ++FPASVL  EQRD+ R LLH+ +E+K  +  L   Q+
Sbjct: 33  SVLMLHEQASPTVASWSSNFSAQNFPASVLLPEQRDEYRPLLHMSKEDKTSQAMLSTRQM 92

Query: 562 DNDTSLNQEKRERGSEASDKYLKDFERQLLYSPGLWYLSPPSQRENKASSLDMQSMSSDA 383
           D  T       E  +E +D+ + DF + L + P L YL   SQ    A+S  ++ +S D 
Sbjct: 93  DTVTV----HEENNTENADQVVLDFRKHLHHWPNLQYLLTSSQIGEVAASSTLEHVSVDL 148

Query: 382 DEELHVKACDLLALAKQAVLVSKQASSLIVASNSHLHNANELIPSFGMNDISPPE--KEK 209
           +   +    + ++LAK+A+  SKQ SS++    S   + + +        ++ P   + K
Sbjct: 149 ERRPNGVQFNGVSLAKKALSTSKQESSVVEDLKSIKADDDSIPFGLASTSLADPSIGRNK 208

Query: 208 IVRSTRLLERQSKKRRAPKSALLGDEISSLRTTD-------KHHKTSLIDLSDPLRLFLS 50
            VRSTRLLER+SK+R+ PKS ++ DE    R  D       +  K   +D  DPLRLFL 
Sbjct: 209 TVRSTRLLERRSKQRKVPKSKVIDDETYLARKDDAQEKLRAEKKKNEELDQDDPLRLFLW 268

Query: 49  GAEARQLLTAKEEKEL 2
           G E +QLLT ++E +L
Sbjct: 269 GPETKQLLTLEQESQL 284


>gb|EXC16188.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 543

 Score =  119 bits (299), Expect = 9e-25
 Identities = 78/220 (35%), Positives = 135/220 (61%), Gaps = 3/220 (1%)
 Frame = -3

Query: 652 VLQEQRDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYLKDFERQL 476
           +LQEQRD+ + LL + +E+K  +  L+R Q D+   ++++  E  ++    ++ +FER  
Sbjct: 57  LLQEQRDEFKPLLRVNKEDKTSQGVLNRRQNDSGALVHEDTLEDYNQ----FVWEFERPS 112

Query: 475 LYSPGLWYLSPPSQRENK-ASSLDMQSMSSDADEELHVKACDLLALAKQAVLVSKQASSL 299
           ++ PG W++ P  + + K +SSL M++      +++ V+  D +ALAK+A++ SK+A+SL
Sbjct: 113 VHWPGFWHVLPSLKTKVKLSSSLTMETTMGSCTKDVDVEVSDAIALAKKALMASKEAASL 172

Query: 298 IVASNSHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALLGDEISSL 119
              S     ++++++    +      + +K VRSTRLLER+SK+R+ P+S++L  E    
Sbjct: 173 AEESKLVGTDSDDMLSVSFLG-----KGDKTVRSTRLLERRSKRRKVPESSVLFYENPRN 227

Query: 118 RTTDKHHKTSL-IDLSDPLRLFLSGAEARQLLTAKEEKEL 2
           R  D   + S  ++  DPLRLFL+G E RQLLT +EE EL
Sbjct: 228 RAADIRKRLSEGLNSDDPLRLFLAGPETRQLLTFEEESEL 267


>ref|NP_565856.1| RNA polymerase sigma factor sigF [Arabidopsis thaliana]
           gi|75173811|sp|Q9LD95.1|SIGF_ARATH RecName: Full=RNA
           polymerase sigma factor sigF, chloroplastic; Short=Sigma
           factor F; Short=Sigma-F; AltName: Full=Protein SINGLET
           OXYGEN-LINKED DEATH ACTIVATOR 8; AltName: Full=RNA
           polymerase sigma factor sig6; Short=Atsig6; Short=Sigma
           factor 6; Flags: Precursor gi|7209640|dbj|BAA92288.1|
           SigF [Arabidopsis thaliana] gi|7688083|emb|CAB89775.1|
           sigma factor-like protein [Arabidopsis thaliana]
           gi|16604647|gb|AAL24116.1| putative RNA polymerase
           sigma-70 factor [Arabidopsis thaliana]
           gi|20197948|gb|AAD31584.2| putative RNA polymerase
           sigma-70 factor [Arabidopsis thaliana]
           gi|20259557|gb|AAM14121.1| putative RNA polymerase
           sigma-70 factor protein [Arabidopsis thaliana]
           gi|330254238|gb|AEC09332.1| RNA polymerase sigma factor
           sigF [Arabidopsis thaliana]
          Length = 547

 Score =  119 bits (297), Expect = 2e-24
 Identities = 99/264 (37%), Positives = 144/264 (54%), Gaps = 8/264 (3%)
 Frame = -3

Query: 769 SKHQLRNAH--PLSVAVLHEXXXXXXXXXXXXXXT-RHFPASVL-QEQRDDLRSLLH-LR 605
           +K  L++++  P SV +LH+                RHFPASVL QE R++ R L H LR
Sbjct: 16  TKTHLKSSYSSPSSVVMLHDQTTTPVVNSRHLNSLSRHFPASVLSQEPREESRPLSHALR 75

Query: 604 EEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYLKDFERQLLYSPGLW-YLSPPSQRE 428
           +++  +  L+R Q D   S  ++++             FE+QLL+S GLW  L  P   E
Sbjct: 76  DDRTSQLTLERRQFDELVSSREDEK-------------FEQQLLHSTGLWNLLISPLTSE 122

Query: 427 NKASSLDMQSMSSDADEELHVKACDLLALAKQAVLVSKQASSLIVASNSHLHNANELIPS 248
            K  ++    +S  AD EL    CD++ALA++A+  SKQA+ L+   ++  + ++ +  S
Sbjct: 123 TKLPAV----VSPLADAEL----CDVVALAQKALSASKQAALLV--DDTEANPSDNIKDS 172

Query: 247 FGMND-ISPPEKEKIVRSTRLLERQSKKRRAPKSALLGDE-ISSLRTTDKHHKTSLIDLS 74
              +  +S PEK  IVRS R LER++K RRAPKS  + DE     +T+ K       D  
Sbjct: 173 LSTSSSMSLPEKGNIVRSKRQLERRAKNRRAPKSNDVDDEGYVPQKTSAKKKYKQGADND 232

Query: 73  DPLRLFLSGAEARQLLTAKEEKEL 2
           D L+LFL G E +QLLTAKEE EL
Sbjct: 233 DALQLFLWGPETKQLLTAKEEAEL 256


>gb|EYU34473.1| hypothetical protein MIMGU_mgv1a003862mg [Mimulus guttatus]
          Length = 559

 Score =  117 bits (292), Expect = 6e-24
 Identities = 87/248 (35%), Positives = 131/248 (52%), Gaps = 3/248 (1%)
 Frame = -3

Query: 736 SVAVLHEXXXXXXXXXXXXXXTRHFPASVL-QEQRDDLRSLLHLREEKPYKTALDRTQID 560
           SV +LHE               RH   SVL Q+QR++ R LL L+++  ++   DR Q+ 
Sbjct: 29  SVLLLHEQVTPALTSLSTPSLARHTTTSVLIQDQRNESRPLLSLKDDNTFQQTFDRRQMV 88

Query: 559 NDTSLNQEKRERGSEASDKYLKDFERQLLYSPGLWYL-SPPSQRENKASSLDMQSMSSDA 383
              + +           D+Y  D + QLL  P LWYL S   ++E+   +    S+ S A
Sbjct: 89  TTPASSSSNEGNDKIDPDQYDNDLQLQLLRRPELWYLWSSLQKKEHPFPTTTPNSLPSTA 148

Query: 382 DEELHVKACDLLALAKQAVLVSKQASSLIVASNSHLHNANELIPSFGMNDISPPEKEKIV 203
           +     +A  +LALA++A    K+A+S  +A ++ L++ +    S   + +     ++IV
Sbjct: 149 ENVTGAEANHVLALAREAFSACKEAAS--IAEDARLYDNSSSTRSLVGSPV-----QRIV 201

Query: 202 RSTRLLERQSKKRRAPKSALLGDEISSLRTTDKHHKTSL-IDLSDPLRLFLSGAEARQLL 26
           RS R LERQ+ KRRAPK  L   E++  R  + H K+S   D +DPLRLFL G E  QLL
Sbjct: 202 RSKRRLERQA-KRRAPKPQLEDQEMNHRRKLEPHKKSSEGYDPNDPLRLFLWGPETTQLL 260

Query: 25  TAKEEKEL 2
           +AKEE +L
Sbjct: 261 SAKEEADL 268


>ref|XP_004304450.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 554

 Score =  116 bits (291), Expect = 8e-24
 Identities = 105/270 (38%), Positives = 143/270 (52%), Gaps = 13/270 (4%)
 Frame = -3

Query: 772 PSKHQLRNAHPL-------SVAVLHEXXXXXXXXXXXXXXTRHFPASVL-QEQRDDLRSL 617
           PS  QLR  HPL       SV +LHE              TRHFP SVL QEQRD+ + L
Sbjct: 15  PSTTQLR--HPLPPSSPSTSVLMLHEQAAPAVTSVPTSFITRHFPTSVLLQEQRDEFKPL 72

Query: 616 LHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYLKDFERQLLYSPGLWYLSPP 440
           LH+ +EEK  +  LDR QI+N T+    + +   +   K +KDF RQL       +++P 
Sbjct: 73  LHIFKEEKASQATLDRIQIENTTA----EEDFNIDDFYKLVKDF-RQL-------HVTPS 120

Query: 439 SQRENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLVSKQASSLIVASNSHLHNANE 260
              EN  +   ++S ++ A+  + V+  D+L LAK A+  S +A+SL   S S     NE
Sbjct: 121 QIGENSPTGSALES-NTTANVHMDVEPSDVLTLAKHALSASLEAASLAETSKSISAGLNE 179

Query: 259 LIPSFGMNDISPPEKEKIVRSTRLLERQSK---KRRAPKSALLGDEISSLRTTDKHHK-T 92
              S G+       +E+ VRST+LLER+ K   KR    S +   E SS  ++D   K  
Sbjct: 180 ST-SLGLG-----WEEETVRSTQLLERRRKRLKKRNLLNSKVPNYENSSSNSSDLRRKYR 233

Query: 91  SLIDLSDPLRLFLSGAEARQLLTAKEEKEL 2
             ++ +DPLRLFL G E RQLLT KEE EL
Sbjct: 234 EGLNPNDPLRLFLWGPETRQLLTLKEETEL 263


>ref|XP_006354351.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           [Solanum tuberosum]
          Length = 562

 Score =  116 bits (290), Expect = 1e-23
 Identities = 94/260 (36%), Positives = 136/260 (52%), Gaps = 5/260 (1%)
 Frame = -3

Query: 766 KHQLRNAHPLSVAVLHEXXXXXXXXXXXXXXTRHFPASVL-QEQRDDLRSLLHL-REEKP 593
           K QLRN    SV +LHE               RH PAS +  EQ+ + R  LHL +EEK 
Sbjct: 18  KTQLRNCSS-SVLMLHEHAAPVLSSVPHAYLGRHVPASAIGPEQQFENRLQLHLVKEEKT 76

Query: 592 YKTALDRTQIDNDTSLNQEKRERGSEASDKYLKDFERQLLYSPGLWYLSPPSQRENKAS- 416
               +DR  +D  +S   E  E  +  S++ +   + QLL  PG  Y  PP   + K   
Sbjct: 77  SLATIDRRLVDAASS---ELEENDAVDSEQNINALQVQLLRCPGPSYSFPPYYLKGKGPL 133

Query: 415 SLDMQSMSSDADEELHVKACDLLALAKQAVLVSKQASSLIVASNSHLHNANELIPSFGMN 236
           S + + + S  D+ ++ +   ++ALA++A+L S++A+  ++A +S L + +        N
Sbjct: 134 SPNKEPLHSKGDKLMNFEPHSVVALARKALLASREAA--LLAEDSKLLDDSNFPNFLSTN 191

Query: 235 DISPPEKE-KIVRSTRLLERQSKKRRAPKSALLGDEISSLRTTDKHHKTS-LIDLSDPLR 62
            +    KE + VRSTR  ERQS+KR APK      E +     D   K +  IDL+DPLR
Sbjct: 192 LVDDKLKEQRTVRSTRFTERQSRKRGAPKPTQQVQETNRSGRPDVRRKVNESIDLNDPLR 251

Query: 61  LFLSGAEARQLLTAKEEKEL 2
           +FL G E +QLLTAKEE EL
Sbjct: 252 MFLWGPETKQLLTAKEESEL 271


>ref|XP_006410876.1| hypothetical protein EUTSA_v10016472mg [Eutrema salsugineum]
           gi|312282671|dbj|BAJ34201.1| unnamed protein product
           [Thellungiella halophila] gi|557112045|gb|ESQ52329.1|
           hypothetical protein EUTSA_v10016472mg [Eutrema
           salsugineum]
          Length = 547

 Score =  116 bits (290), Expect = 1e-23
 Identities = 97/253 (38%), Positives = 133/253 (52%), Gaps = 6/253 (2%)
 Frame = -3

Query: 742 PLSVAVLHEXXXXXXXXXXXXXXT-RHFPASVL-QEQRDDLRSLLH-LREEKPYKTALDR 572
           P SV +LHE                RHFPASVL QE R++ + L H LRE++  +  L+R
Sbjct: 27  PSSVVMLHEQTATPVVNSRHLTSLSRHFPASVLSQELREESKPLSHALREDRTSQLTLER 86

Query: 571 TQIDNDTSLNQEKRERGSEASDKYLKDFERQLLYSPGLW-YLSPPSQRENKASSLDMQSM 395
            Q D   S  ++++             FE+QLL+S GLW  L  P   E +  ++   S 
Sbjct: 87  RQFDELVSSREDEK-------------FEQQLLHSAGLWNLLISPLTTEKQLPAV--VSP 131

Query: 394 SSDADEELHVKACDLLALAKQAVLVSKQASSLIVASNSHL-HNANELIPSFGMNDISPPE 218
           S+DAD       CDL+ALA++A+  SKQA+ L+  S +    N  + + +   + +S PE
Sbjct: 132 SADAD------LCDLVALAQKALSASKQAALLVENSEADPPDNPRDSLST--SSSMSLPE 183

Query: 217 KEKIVRSTRLLERQSKKRRAPKSALLGDE-ISSLRTTDKHHKTSLIDLSDPLRLFLSGAE 41
           K  IVRS R LER++K RRAPKS  +  E     +   K       D  D L+LFL G E
Sbjct: 184 KGTIVRSKRQLERRAKNRRAPKSNNMDSEGYVPQKINAKKKMKQGFDTDDALQLFLWGPE 243

Query: 40  ARQLLTAKEEKEL 2
            +QLLTAKEE EL
Sbjct: 244 TKQLLTAKEEAEL 256


>ref|XP_007144359.1| hypothetical protein PHAVU_007G149600g [Phaseolus vulgaris]
           gi|561017549|gb|ESW16353.1| hypothetical protein
           PHAVU_007G149600g [Phaseolus vulgaris]
          Length = 582

 Score =  115 bits (289), Expect = 1e-23
 Identities = 88/265 (33%), Positives = 133/265 (50%), Gaps = 15/265 (5%)
 Frame = -3

Query: 751 NAHPLS----VAVLHEXXXXXXXXXXXXXXTRHFPASVL-QEQRDDLRSLLHL-REEKPY 590
           N HP S    V +L E               ++FPASVL QEQRD+ R LLH+ +E+K  
Sbjct: 31  NTHPTSSSTSVLMLREQASSTVASWSSNFSAQNFPASVLLQEQRDEYRPLLHMSKEDKTS 90

Query: 589 KTALDRTQIDNDTSLNQEKRERGSEASDKYLKDFERQLLYSPGLWYLSPPSQRENKASSL 410
           +  L+  Q+D DT       E  +  +D+ + DF + L   P L  L   SQ    A+S 
Sbjct: 91  QAILNTRQMDMDTV----HEENNTGNADQIVLDFRKHLHLWPRLQNLLNSSQTGEIAASS 146

Query: 409 DMQSMSSDADEELHVKACDLLALAKQAVLVSKQASSLIVASNSHLHNANELIPSFGMNDI 230
            +Q +S D++       C+ ++LAK+A+  +KQ SS++    S   + + +        +
Sbjct: 147 TLQHVSVDSERRTDGVQCNGVSLAKKALSTAKQTSSVVEGLKSIKADDDSIPFGLASTGL 206

Query: 229 SPPE--KEKIVRSTRLLERQSKKRRAPKSALLGDEISSLRTTDKHHK-------TSLIDL 77
           + P   + K VRSTRLLER++K+R+  KS +  DE    R  D   +           D 
Sbjct: 207 ADPSVGRNKTVRSTRLLERRAKQRKVSKSIVKDDETYLTRKDDAQERIRKEKKINEEFDQ 266

Query: 76  SDPLRLFLSGAEARQLLTAKEEKEL 2
           +D LR+FL G E +QLLT ++E EL
Sbjct: 267 NDTLRMFLRGPETKQLLTLEQESEL 291