BLASTX nr result

ID: Papaver27_contig00029769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00029769
         (792 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        50   7e-11
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    58   7e-11
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            58   7e-11

>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 49.7 bits (117), Expect(3) = 7e-11
 Identities = 35/123 (28%), Positives = 51/123 (41%), Gaps = 7/123 (5%)
 Frame = -2

Query: 548  KRTIWTDWVHKNLLKHISFWCISTLLDDSRCWRRILDQRSVAKDLVISILVGGEDTKMLT 369
            K ++W DW H + L   SFW +     DS  W+R+L  R +A   ++  +  G    +  
Sbjct: 891  KDSLWADWQHLHHLSRGSFWAVEGGQSDSWTWKRLLSLRPLAHQFLVCKVGNG----LKA 946

Query: 368  DLWYTK-------KRIIEWMDASIIQTGFHNGKVAEFIEGDHWNLPRSETAAVYSVLSQL 210
            D WY          RII  +  S ++      KVA     D W LP S +A    +   L
Sbjct: 947  DYWYDNWTSLGPLFRIIGDIGPSSLRVPL-LAKVASAFSEDGWRLPVSRSAPAKGIHDHL 1005

Query: 209  AIV 201
              V
Sbjct: 1006 CTV 1008



 Score = 41.2 bits (95), Expect(3) = 7e-11
 Identities = 19/47 (40%), Positives = 28/47 (59%)
 Frame = -1

Query: 171  GFICLLFWGFNMIDTYNAILPNGESQSWCTSVWFKFSNPQTLFNILV 31
            GF+C    GF+   T+ AI P    +SW +S+WFK + P+  FN+ V
Sbjct: 1027 GFLCQ---GFSAAKTWEAIRPKATVKSWASSIWFKGAVPKYAFNMWV 1070



 Score = 22.3 bits (46), Expect(3) = 7e-11
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 643 VSWSNLCSCFKEGGLWVKDIV 581
           VSW+ LC    EGGL ++ ++
Sbjct: 853 VSWAALCLPKSEGGLGLRRLL 873


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score = 58.2 bits (139), Expect(3) = 7e-11
 Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
 Frame = -2

Query: 542  TIWTDWVHKNLLKHISFWCISTLLDDSRCWRRILDQRSVAKDLVISILVGGEDTKMLTDL 363
            ++W  W   + L H SFW ++ L  D   W+ +L+ R +A+  + + +  G       D 
Sbjct: 753  SLWAQWQRHHRLGHASFWQVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNGGTVSFWFDC 812

Query: 362  WYTKKRIIEWM---DASIIQTGFHNGKVAEFIEGDHWNLPRSETAAVYSVLSQLA 207
            W +   +I+++    +  ++  F + KVA+ I+G  W LP S +    S+LS LA
Sbjct: 813  WTSLGPLIKYLGDVGSRPLRIPF-SAKVADAIDGSGWRLPLSRSLTADSILSHLA 866



 Score = 32.0 bits (71), Expect(3) = 7e-11
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -1

Query: 147 GFNMIDTYNAILPNGESQSWCTSVWFKFSNPQTLFN 40
           GF+   T+  + P    + W  SVWFK + P+  FN
Sbjct: 891 GFSAAKTWEVLRPRRPVKRWAKSVWFKGAVPKHAFN 926



 Score = 23.1 bits (48), Expect(3) = 7e-11
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 661 GKKYCPVSWSNLCSCFKEGGL 599
           G+K   VSW + C    EGGL
Sbjct: 707 GRKSSKVSWVDCCLPKSEGGL 727


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 58.2 bits (139), Expect(3) = 7e-11
 Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
 Frame = -2

Query: 542  TIWTDWVHKNLLKHISFWCISTLLDDSRCWRRILDQRSVAKDLVISILVGGEDTKMLTDL 363
            ++W  W   + L H SFW ++ L  D   W+ +L+ R +A+  + + +  G       D 
Sbjct: 753  SLWAQWQRHHRLGHASFWQVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNGGTVSFWFDC 812

Query: 362  WYTKKRIIEWM---DASIIQTGFHNGKVAEFIEGDHWNLPRSETAAVYSVLSQLA 207
            W +   +I+++    +  ++  F + KVA+ I+G  W LP S +    S+LS LA
Sbjct: 813  WTSLGPLIKYLGDVGSRPLRIPF-SAKVADAIDGSGWRLPLSRSLTADSILSHLA 866



 Score = 32.0 bits (71), Expect(3) = 7e-11
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -1

Query: 147 GFNMIDTYNAILPNGESQSWCTSVWFKFSNPQTLFN 40
           GF+   T+  + P    + W  SVWFK + P+  FN
Sbjct: 891 GFSAAKTWEVLRPRRPVKRWARSVWFKGAVPKHAFN 926



 Score = 23.1 bits (48), Expect(3) = 7e-11
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 661 GKKYCPVSWSNLCSCFKEGGL 599
           G+K   VSW + C    EGGL
Sbjct: 707 GRKSSKVSWVDCCLPKSEGGL 727


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