BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00029749
         (435 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...    75   1e-11
gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vul...    73   4e-11

>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 48/139 (34%), Positives = 66/139 (47%)
 Frame = -1

Query: 417 LMHGKDKMTYAEVTTTLRSEEFRKMDR*DLASEANNDLLLARGRSTDXXXXXXXXXXXXX 238
           L+HGK+ ++   V + L S E RK D+    S  + + L+ARGR                
Sbjct: 104 LLHGKENVSLDVVCSALYSHELRKQDKMKTKSTTSEEALVARGRQQSQTKERRGMSKSKG 163

Query: 237 XXXXRTRLQKDECAWCHDFGHWAKDCMKRKAREGDNNNTEVNIAKGNDESDDASDFSLTV 58
                  + KDECA+CH+ GHW KDC K + +E    +  V   K    SD  SD SL V
Sbjct: 164 RA-----VAKDECAFCHEKGHWKKDCPKLQKKEKVLQDANVAECK----SDVESDISLIV 214

Query: 57  TPSTCAITDGTWVLDTGAT 1
           + S     D  W+LD+G T
Sbjct: 215 SLSASLYLD-EWILDSGCT 232


>gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vulgaris]
          Length = 324

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 47/139 (33%), Positives = 65/139 (46%)
 Frame = -1

Query: 417 LMHGKDKMTYAEVTTTLRSEEFRKMDR*DLASEANNDLLLARGRSTDXXXXXXXXXXXXX 238
           L+HGKD ++   V + L S E RK D+    S  + + L+ RG                 
Sbjct: 143 LLHGKDNVSLDVVCSALYSHELRKQDKMKTKSTTSEEALVTRGGQQSQTKERRGMCKSKG 202

Query: 237 XXXXRTRLQKDECAWCHDFGHWAKDCMKRKAREGDNNNTEVNIAKGNDESDDASDFSLTV 58
                  + KDECA+CH+ GHW KDC K + +E    +  V   K    SD  SD SL V
Sbjct: 203 RV-----VAKDECAFCHEKGHWKKDCPKLQKKEKVPQDANVAECK----SDVESDISLIV 253

Query: 57  TPSTCAITDGTWVLDTGAT 1
           + S  +  D  W+LD+G T
Sbjct: 254 SLSASSYPD-EWILDSGCT 271