BLASTX nr result
ID: Papaver27_contig00029749
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver27_contig00029749 (435 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 75 1e-11 gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vul... 73 4e-11 >gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris] Length = 867 Score = 74.7 bits (182), Expect = 1e-11 Identities = 48/139 (34%), Positives = 66/139 (47%) Frame = -1 Query: 417 LMHGKDKMTYAEVTTTLRSEEFRKMDR*DLASEANNDLLLARGRSTDXXXXXXXXXXXXX 238 L+HGK+ ++ V + L S E RK D+ S + + L+ARGR Sbjct: 104 LLHGKENVSLDVVCSALYSHELRKQDKMKTKSTTSEEALVARGRQQSQTKERRGMSKSKG 163 Query: 237 XXXXRTRLQKDECAWCHDFGHWAKDCMKRKAREGDNNNTEVNIAKGNDESDDASDFSLTV 58 + KDECA+CH+ GHW KDC K + +E + V K SD SD SL V Sbjct: 164 RA-----VAKDECAFCHEKGHWKKDCPKLQKKEKVLQDANVAECK----SDVESDISLIV 214 Query: 57 TPSTCAITDGTWVLDTGAT 1 + S D W+LD+G T Sbjct: 215 SLSASLYLD-EWILDSGCT 232 >gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vulgaris] Length = 324 Score = 73.2 bits (178), Expect = 4e-11 Identities = 47/139 (33%), Positives = 65/139 (46%) Frame = -1 Query: 417 LMHGKDKMTYAEVTTTLRSEEFRKMDR*DLASEANNDLLLARGRSTDXXXXXXXXXXXXX 238 L+HGKD ++ V + L S E RK D+ S + + L+ RG Sbjct: 143 LLHGKDNVSLDVVCSALYSHELRKQDKMKTKSTTSEEALVTRGGQQSQTKERRGMCKSKG 202 Query: 237 XXXXRTRLQKDECAWCHDFGHWAKDCMKRKAREGDNNNTEVNIAKGNDESDDASDFSLTV 58 + KDECA+CH+ GHW KDC K + +E + V K SD SD SL V Sbjct: 203 RV-----VAKDECAFCHEKGHWKKDCPKLQKKEKVPQDANVAECK----SDVESDISLIV 253 Query: 57 TPSTCAITDGTWVLDTGAT 1 + S + D W+LD+G T Sbjct: 254 SLSASSYPD-EWILDSGCT 271