BLASTX nr result

ID: Papaver27_contig00029689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00029689
         (716 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus ...    58   3e-06
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    57   8e-06

>ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223540440|gb|EEF42009.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 369

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 61/200 (30%), Positives = 82/200 (41%), Gaps = 15/200 (7%)
 Frame = +1

Query: 1   GFGYVSSTNDYKVVRIMSVEETKFKEVHVYTLGSGNGWRNL--XXXXXXXXXXXXXXSGA 174
           GFGY S  +DYK+VR  S       ++ V+ L  GN WR +                +G 
Sbjct: 150 GFGYDSKLDDYKIVRGASSASCNEVQMEVFNL-KGNRWRAIQNLHCNVRFQGSAIALNGI 208

Query: 175 LYWLDYELK---MIVHFDLAEEKFCKXXXXXXXXXXXXXYYRLRVLDGCLSFAIGRYDYE 345
           L+WL  +L    MIV  DLAEEKF +                L+VL   LS     +   
Sbjct: 209 LHWLVDQLNEGLMIVSLDLAEEKFLEMVVLPDYVTENWG-TELKVLGDSLSVCSSSHTTN 267

Query: 346 FEATCWDVWLLKNTDDNHGMKAREGLQSLGWSKVFRACGDEL---------FAVTKSSDV 498
           FEA     W +K     +G KA        W K+F    D L           V K+ +V
Sbjct: 268 FEA-----WTVK----GYGSKA-------SWLKLFSFNSDPLPGCKYWLNVLWVAKNGNV 311

Query: 499 -LTHSGKHINIYDPEASTLK 555
            L + G  I +Y+P+  TLK
Sbjct: 312 LLNYEGLEIIVYNPKEQTLK 331


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 61/218 (27%), Positives = 91/218 (41%), Gaps = 33/218 (15%)
 Frame = +1

Query: 1   GFGYVSSTNDYKVVRIMSVEE-----TKFK-------EVHVYTLGSGNGWRNL--XXXXX 138
           GFGY   T  YKVV+++         ++F+       EV V TLGS   WR+L       
Sbjct: 170 GFGYHPMTEVYKVVKVVYYRNGYGGFSRFRRITCSQSEVQVLTLGSPT-WRSLGKVSYQL 228

Query: 139 XXXXXXXXXSGALYWLD----YELKMIVHFDLAEEKFCKXXXXXXXXXXXXXYYRLRVLD 306
                    +G L+W+     Y  + IV FDLA+E+F +              Y L VL 
Sbjct: 229 DRWPSEALVNGRLHWVTRPRRYVTRFIVSFDLADEQF-REIPKPDCGGLSRCNYHLLVLG 287

Query: 307 GCLSFAIGRYDYEFEATCWDVWLLKNTD--------DNHGMKAREGLQS------LGWSK 444
           GCLS A+ R + + E     VW++K  D         N G    +GL+         W  
Sbjct: 288 GCLSAAVHRSNGKLE-----VWVMKEYDVKESWIKEFNIGAHLPKGLKQDVNRPHRIWRN 342

Query: 445 VFRACGDELFAVTKSSDV-LTHSGKHINIYDPEASTLK 555
             +  G  L  + K+ ++ L + G+ +  Y+PE    K
Sbjct: 343 APKGRGVRLLCLLKNGEILLEYKGRVLVSYNPERGKFK 380


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