BLASTX nr result

ID: Papaver27_contig00029379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00029379
         (396 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006493733.1| PREDICTED: nuclear-pore anchor-like [Citrus ...    61   2e-07
ref|XP_006422313.1| hypothetical protein CICLE_v10006542mg [Citr...    61   2e-07
ref|XP_007213286.1| hypothetical protein PRUPE_ppa000061mg [Prun...    60   2e-07
dbj|BAO49712.1| nuclear pore complex protein TPRb [Nicotiana ben...    58   2e-06
dbj|BAO49711.1| nuclear pore complex protein TPRa [Nicotiana ben...    56   6e-06

>ref|XP_006493733.1| PREDICTED: nuclear-pore anchor-like [Citrus sinensis]
          Length = 2058

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 55/147 (37%), Positives = 77/147 (52%), Gaps = 15/147 (10%)
 Frame = +1

Query: 1    LVRPRLALPEGASGDVEMSEVEAPSNNADSKVVTPSHDCEPEANLAPAIAIQTLVRKRPA 180
            LVRPRL  PE + GD+E SE E   +N   KV   SHD E + NL  A+  Q   RKRPA
Sbjct: 1673 LVRPRLKRPEESQGDMETSEAE--GSNITGKVAA-SHDAETQGNL--ALQSQLSARKRPA 1727

Query: 181  SLASSGTPDEGNIKEEPDSSMP----KKSKVFDCLSENI----AEIEERIDTKTDDAVDT 336
            S  ++   +E   + EP S +P    KKSK+ D  SE+     A   E     T+++V+ 
Sbjct: 1728 S-TTTELREESLSQGEPSSDVPAPVLKKSKLPDSSSEDAGGQSASPLEDTQPTTEESVEA 1786

Query: 337  -------ACEEPVDSEKDDTVPAAGEE 396
                   + EE V++EK++ V   GE+
Sbjct: 1787 VGDLAQGSNEEAVEAEKEE-VDNTGEK 1812


>ref|XP_006422313.1| hypothetical protein CICLE_v10006542mg [Citrus clementina]
            gi|557524186|gb|ESR35553.1| hypothetical protein
            CICLE_v10006542mg [Citrus clementina]
          Length = 2070

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 55/147 (37%), Positives = 77/147 (52%), Gaps = 15/147 (10%)
 Frame = +1

Query: 1    LVRPRLALPEGASGDVEMSEVEAPSNNADSKVVTPSHDCEPEANLAPAIAIQTLVRKRPA 180
            LVRPRL  PE + GD+E SE E   +N   KV   SHD E + NL  A+  Q   RKRPA
Sbjct: 1685 LVRPRLKRPEESQGDMETSEAE--GSNITGKVAA-SHDAETQGNL--ALQSQLSARKRPA 1739

Query: 181  SLASSGTPDEGNIKEEPDSSMP----KKSKVFDCLSENI----AEIEERIDTKTDDAVDT 336
            S  ++   +E   + EP S +P    KKSK+ D  SE+     A   E     T+++V+ 
Sbjct: 1740 S-TTTELREESLSQGEPSSDVPAPVLKKSKLPDSSSEDAGGQSASPLEDTQPTTEESVEA 1798

Query: 337  -------ACEEPVDSEKDDTVPAAGEE 396
                   + EE V++EK++ V   GE+
Sbjct: 1799 VGDLAQGSNEEAVEAEKEE-VDNTGEK 1824


>ref|XP_007213286.1| hypothetical protein PRUPE_ppa000061mg [Prunus persica]
            gi|462409151|gb|EMJ14485.1| hypothetical protein
            PRUPE_ppa000061mg [Prunus persica]
          Length = 2038

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 52/152 (34%), Positives = 77/152 (50%), Gaps = 20/152 (13%)
 Frame = +1

Query: 1    LVRPRLALPEGASGDVEMSEVEAPSNNADSKVVTPSHDCEPEANLAPAIAIQTLVRKRPA 180
            LVRPRLA PE   GDVEMSE+E   N A      PS++ E + N+    + Q L+RKR A
Sbjct: 1640 LVRPRLARPEEPQGDVEMSEMEGSRNVAKH---APSNEMEVQGNVT---STQPLLRKRHA 1693

Query: 181  SLASSGTPDEGNIKEE--PD--SSMPKKSKVFD----------CLSENIAEIEERIDTKT 318
            S ++  + +E + + E  PD  + +PKKSK  D           +SEN+  +  +     
Sbjct: 1694 SSSAFESREESSNQGETGPDVAAPVPKKSKGSDSPQGSEGQPSAISENLCSVPVK----- 1748

Query: 319  DDAVDTA------CEEPVDSEKDDTVPAAGEE 396
            D+A+D A       EE V   + + +   GE+
Sbjct: 1749 DEAIDVAELPQGSNEEAVGDTEKEEIETTGEK 1780


>dbj|BAO49712.1| nuclear pore complex protein TPRb [Nicotiana benthamiana]
          Length = 2041

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 15/147 (10%)
 Frame = +1

Query: 1    LVRPRLALPEGASGDVEMSEVEAPSNNADSKVVTPSHDCEPEANLAPAIAIQTLVRKRPA 180
            LVRPR+  PE  S DVEM + +  SN+   K + P  + E   N    +A Q  +RKRP+
Sbjct: 1652 LVRPRITKPEEPSADVEMQDTDVSSNS--GKHIIPPQNAESLDN--ATLATQPPIRKRPS 1707

Query: 181  SLASSGTPDEGNIKEEP--DSSMP--KKSKVFDCLSE-------NIAEIEERIDTKTD-- 321
            + ++S   +E +   EP  D + P  K+SK  +   E         AEI E + T  +  
Sbjct: 1708 AASTSELQEESSATGEPCLDVAQPVLKRSKGLEAPQEGGEEKSVGNAEISESLATTEEHD 1767

Query: 322  --DAVDTACEEPVDSEKDDTVPAAGEE 396
              D      EE  D+EKD+T+  +GE+
Sbjct: 1768 AGDGTQGFKEEASDTEKDETM-LSGEQ 1793


>dbj|BAO49711.1| nuclear pore complex protein TPRa [Nicotiana benthamiana]
          Length = 2045

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 48/147 (32%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
 Frame = +1

Query: 1    LVRPRLALPEGASGDVEMSEVEAPSNNADSKVVTPSHDCEPEANLAPAIAIQTLVRKRPA 180
            LVRPR+  PE  S D EM + +  SN+   K + P  + E   N    +A Q  +RKRP+
Sbjct: 1656 LVRPRITKPEEPSADAEMQDTDVSSNS--GKHIIPPQNAESLDN--ATLATQPPIRKRPS 1711

Query: 181  SLASSGTPDEGNIKEEP--DSSMP--KKSKVFDCLSE-------NIAEIEERIDT----K 315
            + ++S   +E +   EP  D + P  KKSK  +   E          EI E + T    +
Sbjct: 1712 AASTSELQEESSATGEPCVDVAQPVIKKSKGLEAPQEGGEEKSVGNVEISESLPTTEEHE 1771

Query: 316  TDDAVDTACEEPVDSEKDDTVPAAGEE 396
              D      EE  D+EKD+T+  +GE+
Sbjct: 1772 AGDETQGFKEEASDTEKDETM-LSGEQ 1797


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