BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00029163
         (632 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...   176   4e-42
gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]       170   4e-40
ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   164   2e-38
ref|XP_006849794.1| hypothetical protein AMTR_s00176p00039530 [A...   163   5e-38
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   162   8e-38
ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis...   161   1e-37
gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thali...   161   2e-37
ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis tha...   161   2e-37
emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis hall...   160   4e-37
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      160   4e-37
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   159   7e-37
ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis ...   158   1e-36
ref|XP_004953848.1| PREDICTED: probable RNA-dependent RNA polyme...   155   9e-36
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      155   9e-36
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   153   4e-35
ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Caps...   152   6e-35
gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare su...   152   6e-35
ref|XP_002454320.1| hypothetical protein SORBIDRAFT_04g028630 [S...   151   1e-34
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]       151   1e-34
gb|EEE57765.1| hypothetical protein OsJ_08301 [Oryza sativa Japo...   151   2e-34

>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
           gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
           polymerase 1 isoform 1 [Theobroma cacao]
           gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
           polymerase 1 isoform 1 [Theobroma cacao]
           gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
           gi|508709488|gb|EOY01385.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
           gi|508709489|gb|EOY01386.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score =  176 bits (447), Expect = 4e-42
 Identities = 97/198 (48%), Positives = 134/198 (67%)
 Frame = +2

Query: 32  MGRTIHIYGFPAYVTAELVKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 211
           MG+TI +  FP+ V AE VK FLE YTGK TVYAL++   KN G   RAYA +QFT + +
Sbjct: 1   MGKTIQVSRFPSNVHAEEVKTFLELYTGKETVYALKIRQQKNGG---RAYAIVQFTKSTD 57

Query: 212 ADYMSLLISQPQRLHYDTSYLKVFDRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTL 391
           A+ +  L +Q  RL+Y +SYLK  + + DI+PKPR  +  ++  TLHFGCQVSN+ FY L
Sbjct: 58  AELIIRLTNQ--RLYYGSSYLKAREMENDIVPKPRTFLHTMEGVTLHFGCQVSNEKFYVL 115

Query: 392 CKTKDVSVDFGFGFRKLCCLLSYKDPLKIKPVNYKLELSYESIWEIQLRRPKNLNSQFLI 571
            +  DV+V+FG G RKL  LLS+        V Y+L+L YE+IW+I+L RP+N  S++L+
Sbjct: 116 WEEVDVTVNFGMGMRKLQFLLSH------HCVEYRLDLFYENIWQIELHRPRNQTSKYLL 169

Query: 572 IQMNAAPRVYVEPLSSLG 625
           IQ+  APR+Y + + S G
Sbjct: 170 IQLFGAPRIYEKDVRSSG 187


>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 1133

 Score =  170 bits (430), Expect = 4e-40
 Identities = 88/190 (46%), Positives = 129/190 (67%)
 Frame = +2

Query: 32  MGRTIHIYGFPAYVTAELVKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 211
           MG+TI + GFP++V+AE VK+FLE +TG+GTVYA+++   KN G   R+YA +QF T + 
Sbjct: 1   MGKTIQLSGFPSHVSAESVKEFLEGHTGRGTVYAIKIRPTKNGGS--RSYAIVQFMTVET 58

Query: 212 ADYMSLLISQPQRLHYDTSYLKVFDRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTL 391
           A+ +  L +   RL Y  SYL     +RDI+PKPR +++ L+  TLHFGCQ+S + F  L
Sbjct: 59  AELIIRLANP--RLWYGRSYLLARVMERDIVPKPRATLYSLQNVTLHFGCQISKEKFSFL 116

Query: 392 CKTKDVSVDFGFGFRKLCCLLSYKDPLKIKPVNYKLELSYESIWEIQLRRPKNLNSQFLI 571
            +  +VSVDFG G R+L   L+Y       PV Y+L+L YE++W+I+L RP+   +++L+
Sbjct: 117 WRVGNVSVDFGLGLRRLNFYLTY------GPVEYRLQLLYENVWQIELHRPRGQTAKYLL 170

Query: 572 IQMNAAPRVY 601
           IQ+  APRVY
Sbjct: 171 IQLLGAPRVY 180


>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Glycine
           max] gi|571439308|ref|XP_006574822.1| PREDICTED:
           RNA-dependent RNA polymerase 1-like isoform X2 [Glycine
           max] gi|571439310|ref|XP_006574823.1| PREDICTED:
           RNA-dependent RNA polymerase 1-like isoform X3 [Glycine
           max]
          Length = 1125

 Score =  164 bits (416), Expect = 2e-38
 Identities = 91/191 (47%), Positives = 123/191 (64%), Gaps = 1/191 (0%)
 Frame = +2

Query: 32  MGRTIHIYGFPAYVTAELVKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 211
           MG+TI +YGFP  V    VK F+E YTG+GTV+A+++     KG  PRA+A IQFTT  +
Sbjct: 1   MGKTIELYGFPTSVNVSDVKTFVEQYTGEGTVFAIKLR--HGKGRVPRAFAIIQFTTANS 58

Query: 212 ADYMSLLISQPQR-LHYDTSYLKVFDRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYT 388
           A  M    +   R L Y TSYLK  + +RDI+P+PRV +  L    L FGCQ+S   F  
Sbjct: 59  ATSMMSRANNILRTLRYGTSYLKAREMERDIVPRPRVFLHSLDDVKLSFGCQISKGRFSV 118

Query: 389 LCKTKDVSVDFGFGFRKLCCLLSYKDPLKIKPVNYKLELSYESIWEIQLRRPKNLNSQFL 568
           L K +DV V+FG G RK+  L S+ +      V YKLELSYE+IW+I+L RP+N  +++L
Sbjct: 119 LWKKQDVIVNFGSGMRKMHFLFSHNN------VQYKLELSYENIWKIELHRPRNETTRYL 172

Query: 569 IIQMNAAPRVY 601
           +IQ+  APRV+
Sbjct: 173 LIQLLGAPRVF 183


>ref|XP_006849794.1| hypothetical protein AMTR_s00176p00039530 [Amborella trichopoda]
           gi|548853371|gb|ERN11375.1| hypothetical protein
           AMTR_s00176p00039530 [Amborella trichopoda]
          Length = 1210

 Score =  163 bits (412), Expect = 5e-38
 Identities = 86/200 (43%), Positives = 129/200 (64%)
 Frame = +2

Query: 17  GDTTNMGRTIHIYGFPAYVTAELVKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQF 196
           G ++  GRT+ + GFP    AE VK FLE  TG GTVY L++ I K+K PN R +A +QF
Sbjct: 69  GVSSEGGRTVQVSGFPQGTCAEAVKKFLESITGFGTVYHLKIRIHKSK-PNSRVFAIVQF 127

Query: 197 TTTQNADYMSLLISQPQRLHYDTSYLKVFDRDRDIIPKPRVSMFHLKVPTLHFGCQVSND 376
           TT+++A+ +  L  QP+ L++  SY+ V   + DI+P PRV+   L+   L+FG Q+S +
Sbjct: 128 TTSKSAEVIYSLAPQPKSLYFGNSYVIVRYMENDIVPNPRVTYHVLESIQLYFGNQISEE 187

Query: 377 CFYTLCKTKDVSVDFGFGFRKLCCLLSYKDPLKIKPVNYKLELSYESIWEIQLRRPKNLN 556
            F  L    +V V+FGFG +K+   L++        V+YKL+L YE+IW+IQLRRP    
Sbjct: 188 SFAILWSNTNVKVEFGFGLKKIFFYLAHTG------VDYKLDLYYENIWQIQLRRPGTEG 241

Query: 557 SQFLIIQMNAAPRVYVEPLS 616
           +++L++QM  APR++ +PLS
Sbjct: 242 TRYLVLQMQGAPRIFQKPLS 261


>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score =  162 bits (410), Expect = 8e-38
 Identities = 89/196 (45%), Positives = 128/196 (65%)
 Frame = +2

Query: 32  MGRTIHIYGFPAYVTAELVKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 211
           MG+TI ++GFPA VTAE VKDFLE  TG GTVYAL++  PK KG   R YA +QFTT + 
Sbjct: 1   MGKTIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPK-KGVG-RLYAIVQFTTKEA 58

Query: 212 ADYMSLLISQPQRLHYDTSYLKVFDRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTL 391
           AD +  L  + ++L Y  SYL     ++D +P+PR  M  ++   LHFGC++SN+ F  L
Sbjct: 59  ADTIISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNEKFAVL 118

Query: 392 CKTKDVSVDFGFGFRKLCCLLSYKDPLKIKPVNYKLELSYESIWEIQLRRPKNLNSQFLI 571
            +  +V+V+FGFG RK+  LLS+          Y+LEL YE+IWEI+L  P+   +++L+
Sbjct: 119 WRGVNVTVNFGFGMRKINFLLSHLGE------EYRLELDYENIWEIELHCPRWQMTKYLL 172

Query: 572 IQMNAAPRVYVEPLSS 619
           IQ+  APR++ + + S
Sbjct: 173 IQLLGAPRIFQKGIRS 188


>ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
           gi|316989899|gb|ADU77015.1| RNA-dependent RNA polymerase
           1a [Cucumis sativus]
          Length = 1130

 Score =  161 bits (408), Expect = 1e-37
 Identities = 91/190 (47%), Positives = 123/190 (64%)
 Frame = +2

Query: 32  MGRTIHIYGFPAYVTAELVKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 211
           MG+TIHI GFP++VTA+ VK+FLE +TG GTVYA++V  PK  G   R YA +QFT+   
Sbjct: 1   MGKTIHISGFPSHVTADAVKNFLEGHTGPGTVYAIKVRPPKRGG--GRLYAIVQFTSATQ 58

Query: 212 ADYMSLLISQPQRLHYDTSYLKVFDRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTL 391
           A+ +  L +  QRL Y +SYLK    + DI+PKPR  M+ L+   L FGCQVS + F  L
Sbjct: 59  AELIISLAN--QRLWYGSSYLKARATEVDIVPKPRTYMYTLEELLLCFGCQVSTEKFRVL 116

Query: 392 CKTKDVSVDFGFGFRKLCCLLSYKDPLKIKPVNYKLELSYESIWEIQLRRPKNLNSQFLI 571
            +     V FG G RK+   L YK       V Y+LELSYE IW+IQL  P++ + ++L+
Sbjct: 117 WEGNVDLVTFGIGMRKMNFHLKYKS------VEYRLELSYEIIWQIQLHCPRDQSMKYLL 170

Query: 572 IQMNAAPRVY 601
           IQ++ APR+Y
Sbjct: 171 IQLSGAPRIY 180


>gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score =  161 bits (407), Expect = 2e-37
 Identities = 86/190 (45%), Positives = 122/190 (64%)
 Frame = +2

Query: 32  MGRTIHIYGFPAYVTAELVKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 211
           MG+TI ++GFP  V+AE VK FLE  TG GTVYA++V  PK  GP  R YA +QFT+ ++
Sbjct: 1   MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGP--RVYAIVQFTSERH 58

Query: 212 ADYMSLLISQPQRLHYDTSYLKVFDRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTL 391
                ++ +  +RL+Y  SYLK F+ ++DI+PKPR S+  +    + FGCQVS   F TL
Sbjct: 59  TRL--IITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTL 116

Query: 392 CKTKDVSVDFGFGFRKLCCLLSYKDPLKIKPVNYKLELSYESIWEIQLRRPKNLNSQFLI 571
              +DV V FG G RKL    S+         +Y+LELSYE+IW+I L  P+  +S+FL+
Sbjct: 117 WSAQDVCVSFGIGMRKLHFSFSWYQK------DYRLELSYENIWQIDLHSPQGRSSKFLV 170

Query: 572 IQMNAAPRVY 601
           IQ+  AP+++
Sbjct: 171 IQVIGAPKIF 180


>ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
           gi|75335341|sp|Q9LQV2.1|RDR1_ARATH RecName:
           Full=RNA-dependent RNA polymerase 1; Short=AtRDRP1;
           AltName: Full=RNA-directed RNA polymerase 1
           gi|8778232|gb|AAF79241.1|AC006917_26 F10B6.19
           [Arabidopsis thaliana] gi|110737376|dbj|BAF00633.1|
           putative RNA-directed RNA polymerase [Arabidopsis
           thaliana] gi|332191105|gb|AEE29226.1| RNA-dependent RNA
           polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score =  161 bits (407), Expect = 2e-37
 Identities = 86/190 (45%), Positives = 122/190 (64%)
 Frame = +2

Query: 32  MGRTIHIYGFPAYVTAELVKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 211
           MG+TI ++GFP  V+AE VK FLE  TG GTVYA++V  PK  GP  R YA +QFT+ ++
Sbjct: 1   MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGP--RVYAIVQFTSERH 58

Query: 212 ADYMSLLISQPQRLHYDTSYLKVFDRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTL 391
                ++ +  +RL+Y  SYLK F+ ++DI+PKPR S+  +    + FGCQVS   F TL
Sbjct: 59  TRL--IITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTL 116

Query: 392 CKTKDVSVDFGFGFRKLCCLLSYKDPLKIKPVNYKLELSYESIWEIQLRRPKNLNSQFLI 571
              +DV V FG G RKL    S+         +Y+LELSYE+IW+I L  P+  +S+FL+
Sbjct: 117 WSAQDVCVSFGIGMRKLHFSFSWYQK------DYRLELSYENIWQIDLHSPQGRSSKFLV 170

Query: 572 IQMNAAPRVY 601
           IQ+  AP+++
Sbjct: 171 IQVIGAPKIF 180


>emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis halleri subsp. halleri]
          Length = 1107

 Score =  160 bits (404), Expect = 4e-37
 Identities = 86/190 (45%), Positives = 122/190 (64%)
 Frame = +2

Query: 32  MGRTIHIYGFPAYVTAELVKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 211
           MG+TI ++GFP  V+AE VK FLE  TG GTVYA++V  PK  GP  R +A +QFT  + 
Sbjct: 1   MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGP--RVFAIVQFTNERY 58

Query: 212 ADYMSLLISQPQRLHYDTSYLKVFDRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTL 391
           A  + +  +  +RL+Y  SYL  F+ D+DI+PKPR S+ ++    ++FGCQVS   F TL
Sbjct: 59  ARQI-ITGAAERRLYYGRSYLNAFEVDQDIVPKPRASLHNISGLKMYFGCQVSTQKFLTL 117

Query: 392 CKTKDVSVDFGFGFRKLCCLLSYKDPLKIKPVNYKLELSYESIWEIQLRRPKNLNSQFLI 571
              +DV V FG G RKL    S+         +Y+LELSYE+IW+I L  P+  +S+FL+
Sbjct: 118 WSAQDVCVSFGIGMRKLHFSFSWYQK------DYRLELSYENIWQIDLHSPQGRSSKFLV 171

Query: 572 IQMNAAPRVY 601
           IQ+  AP+++
Sbjct: 172 IQVIGAPKIF 181


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  160 bits (404), Expect = 4e-37
 Identities = 90/190 (47%), Positives = 125/190 (65%)
 Frame = +2

Query: 32  MGRTIHIYGFPAYVTAELVKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 211
           MG+TI +YGF + V+A  VK FLE YTG+ TVYAL++   K  G   RA+A +QFT + +
Sbjct: 1   MGKTIQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHKKSG---RAFAIVQFTRSSD 57

Query: 212 ADYMSLLISQPQRLHYDTSYLKVFDRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTL 391
           A  +  L +Q  RL+Y  SYLK  + + DI+PKPRV +  ++  T++FGCQVS + FY L
Sbjct: 58  AGLIIRLANQ--RLYYGRSYLKAREMETDIVPKPRVFLHTMERVTVNFGCQVSEEKFYVL 115

Query: 392 CKTKDVSVDFGFGFRKLCCLLSYKDPLKIKPVNYKLELSYESIWEIQLRRPKNLNSQFLI 571
            K  +V+++FG G RKL  LLSY          YKLEL YE+IW+I+LR P +  S+ L+
Sbjct: 116 WKADNVTLNFGTGMRKLEFLLSYCSS------KYKLELFYENIWQIELRCPHSQTSKHLL 169

Query: 572 IQMNAAPRVY 601
           IQ+  APR+Y
Sbjct: 170 IQLFGAPRIY 179


>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score =  159 bits (402), Expect = 7e-37
 Identities = 89/197 (45%), Positives = 128/197 (64%)
 Frame = +2

Query: 32  MGRTIHIYGFPAYVTAELVKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 211
           MG+TI +YG P+ V+A  +K+FLE YTG+GT+ AL++  PK+       +A +QFT+ + 
Sbjct: 1   MGKTIQVYGVPSNVSANEIKEFLEKYTGEGTIEALEIKQPKSGVS--MTHAKVQFTSLRL 58

Query: 212 ADYMSLLISQPQRLHYDTSYLKVFDRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTL 391
           A+   L+IS  ++L Y  +YLK  + D DIIPKPR  +  +   TLHFG Q+SN+ F  L
Sbjct: 59  AE---LIISLAKQLWYGGNYLKAREMDLDIIPKPRTFLHSMDRITLHFGYQMSNERFCVL 115

Query: 392 CKTKDVSVDFGFGFRKLCCLLSYKDPLKIKPVNYKLELSYESIWEIQLRRPKNLNSQFLI 571
            K  +VSV FGFG RK    LS+          YKLELS E+IW+IQLR P+  N++FL+
Sbjct: 116 WKAINVSVKFGFGLRKFYFFLSHGSE------EYKLELSCENIWQIQLREPRGQNTKFLL 169

Query: 572 IQMNAAPRVYVEPLSSL 622
           IQ+  AP++Y + +S+L
Sbjct: 170 IQLLDAPQIYEKDVSAL 186


>ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297338672|gb|EFH69089.1| RNA-dependent RNA polymerase
           1 [Arabidopsis lyrata subsp. lyrata]
          Length = 1107

 Score =  158 bits (400), Expect = 1e-36
 Identities = 87/192 (45%), Positives = 122/192 (63%), Gaps = 2/192 (1%)
 Frame = +2

Query: 32  MGRTIHIYGFPAYVTAELVKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 211
           MG+TI ++GFP  V+AE VK FLE  TG GTVYA++V  PK  GP  R +A +QFT   N
Sbjct: 1   MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGP--RVFAIVQFT---N 55

Query: 212 ADYMSLLIS--QPQRLHYDTSYLKVFDRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFY 385
             Y   +I+    +RL+Y  SYL  F+ ++DI+PKPR S+ ++    ++FGCQVS     
Sbjct: 56  EIYARQIITGAAERRLYYGRSYLNAFEVEQDIVPKPRASLHNISGLKMYFGCQVSTQTLL 115

Query: 386 TLCKTKDVSVDFGFGFRKLCCLLSYKDPLKIKPVNYKLELSYESIWEIQLRRPKNLNSQF 565
           TL   +DVSV FG G RKL    S+         +Y+LELSYE+IW+I L  P+  +S+F
Sbjct: 116 TLWSAQDVSVSFGIGMRKLHFSFSWYQK------DYRLELSYENIWQIDLHSPQGRSSKF 169

Query: 566 LIIQMNAAPRVY 601
           L+IQ+  AP+++
Sbjct: 170 LVIQVIGAPKIF 181


>ref|XP_004953848.1| PREDICTED: probable RNA-dependent RNA polymerase 1-like [Setaria
           italica]
          Length = 1123

 Score =  155 bits (392), Expect = 9e-36
 Identities = 90/194 (46%), Positives = 117/194 (60%), Gaps = 4/194 (2%)
 Frame = +2

Query: 32  MGRTIHIYGFPAYVTAELVKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 211
           MGRTI + GF    +AE VKDFLE   G GTVYAL++  P+N     +A+A +QF T + 
Sbjct: 1   MGRTIQVSGFALTDSAEYVKDFLERIAGAGTVYALKLRHPRNITATSKAFAIVQFQTQEC 60

Query: 212 ADYMSLLISQPQR--LHYDTSYLKVFDRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFY 385
           A   SL+ +  QR  L     YLK    DRDI+P+PR++MF L    LH GC V  +  Y
Sbjct: 61  A---SLVENAAQRNALRSRCIYLKARPADRDIVPRPRIAMFSLDAAALHLGCLVKENILY 117

Query: 386 TLCKTKDVSVDFGFGFRKLCCLLSYKDPLKIKPVNYKLELSYESIWEIQLRRPKNLNSQ- 562
           TL   +++SV FGF  +K+   LSY        + YKLELSYESIWE+QL RP    SQ 
Sbjct: 118 TLFSVRNISVQFGFDMKKIYFYLSY------NLIKYKLELSYESIWEMQLHRPPAYLSQT 171

Query: 563 -FLIIQMNAAPRVY 601
            FL+ Q+ AAP++Y
Sbjct: 172 KFLLFQVQAAPKIY 185


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  155 bits (392), Expect = 9e-36
 Identities = 88/190 (46%), Positives = 123/190 (64%)
 Frame = +2

Query: 32  MGRTIHIYGFPAYVTAELVKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 211
           MG+TI +YGF + V+A  VK FLE YTG+ TVYAL++   K  G   RA+A +QFT + +
Sbjct: 1   MGKTIQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHKKSG---RAFAIVQFTRSSD 57

Query: 212 ADYMSLLISQPQRLHYDTSYLKVFDRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTL 391
           A  +  L +Q  RL+Y  SYLK  + + DI+PKPRV +  ++  T++F C VS + FY L
Sbjct: 58  AGLIIRLANQ--RLYYGRSYLKAREMETDIVPKPRVFLHTMERVTVNFDCHVSEEKFYVL 115

Query: 392 CKTKDVSVDFGFGFRKLCCLLSYKDPLKIKPVNYKLELSYESIWEIQLRRPKNLNSQFLI 571
            K  +V+++FG G RKL  LLSY          YKLEL YE+IW+I+LR P +  S+ L+
Sbjct: 116 WKADNVTLNFGTGMRKLEFLLSYCSS------KYKLELFYENIWQIELRCPHSQTSKHLL 169

Query: 572 IQMNAAPRVY 601
           IQ+  APR+Y
Sbjct: 170 IQLFGAPRIY 179


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  153 bits (387), Expect = 4e-35
 Identities = 81/190 (42%), Positives = 123/190 (64%)
 Frame = +2

Query: 32  MGRTIHIYGFPAYVTAELVKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 211
           M +TI +YGFP+ V+A+ +K+FLE YTG+GT+ AL++  P++       +A +QFT+ + 
Sbjct: 1   MSKTIQVYGFPSIVSADEIKEFLEKYTGEGTIEALEIKQPRSGAS--MTHAKVQFTSFEL 58

Query: 212 ADYMSLLISQPQRLHYDTSYLKVFDRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTL 391
           A+++  L  +  ++ Y  +YLK  + D DIIPKPR  +  +   TLHFGCQ+S++ F  L
Sbjct: 59  AEFIITLCKK--KVWYGRNYLKAREMDLDIIPKPRAFLHSMDRITLHFGCQMSDERFCVL 116

Query: 392 CKTKDVSVDFGFGFRKLCCLLSYKDPLKIKPVNYKLELSYESIWEIQLRRPKNLNSQFLI 571
            K  +VSV FG G RK    LS+          YKLELSYE+IW+IQL+ P+   ++FL+
Sbjct: 117 WKAINVSVKFGSGLRKFYFFLSHGSE------EYKLELSYENIWQIQLQHPRGQITKFLL 170

Query: 572 IQMNAAPRVY 601
           IQ+  AP++Y
Sbjct: 171 IQLLGAPQIY 180


>ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Capsella rubella]
           gi|482575337|gb|EOA39524.1| hypothetical protein
           CARUB_v10008144mg [Capsella rubella]
          Length = 1107

 Score =  152 bits (385), Expect = 6e-35
 Identities = 82/190 (43%), Positives = 121/190 (63%)
 Frame = +2

Query: 32  MGRTIHIYGFPAYVTAELVKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 211
           MG+TI ++GFP  V  + VK FLE  TG GTVYA++V  PK  GP  R +A +QFT+ ++
Sbjct: 1   MGKTIQVFGFPVGVNTDDVKIFLERLTGSGTVYAIKVRQPKRGGP--RVFAIVQFTSERH 58

Query: 212 ADYMSLLISQPQRLHYDTSYLKVFDRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTL 391
           A  +  + ++  RL+Y  SYLK F+ ++DI+PKPR S+  +    ++FGCQVS     TL
Sbjct: 59  ARLIITMAAE--RLYYGRSYLKAFEMEQDIVPKPRASLHSISNLKMYFGCQVSPKKLLTL 116

Query: 392 CKTKDVSVDFGFGFRKLCCLLSYKDPLKIKPVNYKLELSYESIWEIQLRRPKNLNSQFLI 571
               +V V FG G RKL   +S+         +Y+LELSYE+IW+I L  P+  +S+FL+
Sbjct: 117 WSAHNVCVSFGTGMRKLHFSMSWYQK------DYRLELSYENIWQIDLHSPQGGSSKFLV 170

Query: 572 IQMNAAPRVY 601
           IQ+  AP+++
Sbjct: 171 IQVIGAPKIF 180


>gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare subsp. vulgare]
          Length = 1115

 Score =  152 bits (385), Expect = 6e-35
 Identities = 83/200 (41%), Positives = 121/200 (60%), Gaps = 2/200 (1%)
 Frame = +2

Query: 35  GRTIHIYGFPAYVTAELVKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQNA 214
           G+T+ + GFP+ V A+ VKD LE   G G V+A+++  PKN   N R++A +QF   Q+ 
Sbjct: 3   GKTLQVSGFPSTVNADHVKDLLEQIVGTGNVFAVKLRPPKNISANSRSFAIVQF---QSE 59

Query: 215 DYMSLLISQPQR--LHYDTSYLKVFDRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYT 388
            + SL+++  QR  L   + YLK    +RDI+P+PR ++F+L+   LHFGC +       
Sbjct: 60  AHASLVLNAAQRNALRSGSHYLKARYAERDIVPRPRTTIFNLQGAKLHFGCLLKERVLSV 119

Query: 389 LCKTKDVSVDFGFGFRKLCCLLSYKDPLKIKPVNYKLELSYESIWEIQLRRPKNLNSQFL 568
           L    DVSV+FGF  +++   L Y          YKLELSYESIWEIQL RP  L  +FL
Sbjct: 120 LWSGTDVSVEFGFAMKRIDFCLIYNSK------KYKLELSYESIWEIQLHRPPGLQKKFL 173

Query: 569 IIQMNAAPRVYVEPLSSLGN 628
           +IQ+ AAP++Y + +   G+
Sbjct: 174 LIQVQAAPKIYEQNIRLSGS 193


>ref|XP_002454320.1| hypothetical protein SORBIDRAFT_04g028630 [Sorghum bicolor]
           gi|241934151|gb|EES07296.1| hypothetical protein
           SORBIDRAFT_04g028630 [Sorghum bicolor]
          Length = 1114

 Score =  151 bits (382), Expect = 1e-34
 Identities = 84/192 (43%), Positives = 116/192 (60%), Gaps = 2/192 (1%)
 Frame = +2

Query: 32  MGRTIHIYGFPAYVTAELVKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 211
           +GRTI ++GF    +AE VK+FLE  +G GT+YAL++  P+N   N RA+A +QF + ++
Sbjct: 2   VGRTIQVHGFALTDSAESVKEFLERISGAGTIYALKLRHPRNISANSRAFAIVQFQSQES 61

Query: 212 ADYMSLLISQPQRLHYDTSYLKVFDRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTL 391
           A  +  ++ Q         YLK    DRDI+P+PR+ MF L+   LH GC V  +    L
Sbjct: 62  ASLVEDVV-QRNAPRIGRFYLKTRPADRDIVPRPRIPMFSLEDTVLHLGCLVKENILSAL 120

Query: 392 CKTKDVSVDFGFGFRKLCCLLSYKDPLKIKPVNYKLELSYESIWEIQLRRPKNLNS--QF 565
               +VSV FGF  +K+   LSY        + YKLELSYESIWEIQL RP    S  +F
Sbjct: 121 FTASNVSVQFGFDMKKIYFYLSYNF------IKYKLELSYESIWEIQLHRPPAYRSRTKF 174

Query: 566 LIIQMNAAPRVY 601
           L+IQ+ AAP++Y
Sbjct: 175 LLIQVQAAPKIY 186


>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score =  151 bits (382), Expect = 1e-34
 Identities = 83/190 (43%), Positives = 124/190 (65%)
 Frame = +2

Query: 32  MGRTIHIYGFPAYVTAELVKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 211
           MG+TI ++GFP  ++AE VK FLE++TG GTVYAL+V   K      RA+A +QF   ++
Sbjct: 1   MGKTIQVFGFPYLLSAEAVKKFLENHTGNGTVYALEV---KQSKGGRRAFAKVQFANNKS 57

Query: 212 ADYMSLLISQPQRLHYDTSYLKVFDRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTL 391
           A+++  L S  + L+Y  SYLK ++   DI+ +PR  + H+   TL+FGCQ+S+  F  L
Sbjct: 58  AEFIIDLAS--KGLYYGPSYLKAWEMKTDIV-QPRTYVEHMDGVTLNFGCQISDKKFAVL 114

Query: 392 CKTKDVSVDFGFGFRKLCCLLSYKDPLKIKPVNYKLELSYESIWEIQLRRPKNLNSQFLI 571
             +KDVS+ FG G +K+   LS+         +YKL+LSYE+IW++ L RP   N+QFL+
Sbjct: 115 -GSKDVSIKFGIGLKKIYFFLSHAS------ADYKLQLSYENIWQVVLHRPYGQNAQFLL 167

Query: 572 IQMNAAPRVY 601
           +Q+  APR+Y
Sbjct: 168 LQLFGAPRIY 177


>gb|EEE57765.1| hypothetical protein OsJ_08301 [Oryza sativa Japonica Group]
          Length = 1027

 Score =  151 bits (381), Expect = 2e-34
 Identities = 85/190 (44%), Positives = 115/190 (60%), Gaps = 2/190 (1%)
 Frame = +2

Query: 38  RTIHIYGFPAYVTAELVKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQNAD 217
           +T+ + GF    +A+ VKD LE   G G VYA+++  PKN     RAYA +QF T ++A 
Sbjct: 4   KTLQVSGFALDDSADYVKDLLERIVGCGNVYAVKLRHPKNVTATSRAYAIVQFQTEEHAS 63

Query: 218 YMSLLISQP--QRLHYDTSYLKVFDRDRDIIPKPRVSMFHLKVPTLHFGCQVSNDCFYTL 391
            +     +   +R HY   YLKV   DRDI+P+PRVSMF L+  TLHFGC +       L
Sbjct: 64  LVKNAAQRKILRRGHY---YLKVHPSDRDIVPRPRVSMFKLEDVTLHFGCLLKETILSAL 120

Query: 392 CKTKDVSVDFGFGFRKLCCLLSYKDPLKIKPVNYKLELSYESIWEIQLRRPKNLNSQFLI 571
              K VSV+FGF  +K+   L     L    + YKLELS+ESIWEIQL+RP    ++FL+
Sbjct: 121 WSRKGVSVEFGFNLKKIYFYLQ----LPNSSIEYKLELSHESIWEIQLQRPPKSQTKFLL 176

Query: 572 IQMNAAPRVY 601
           IQ+ AAP++Y
Sbjct: 177 IQVQAAPKIY 186