BLASTX nr result

ID: Papaver27_contig00029022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00029022
         (711 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004244145.1| PREDICTED: putative F-box protein At3g58860-...    65   3e-08
ref|XP_006366040.1| PREDICTED: putative F-box protein At3g58860-...    64   4e-08
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    60   9e-07
ref|XP_002880735.1| F-box family protein [Arabidopsis lyrata sub...    59   2e-06
ref|XP_006294221.1| hypothetical protein CARUB_v10023218mg [Caps...    58   4e-06

>ref|XP_004244145.1| PREDICTED: putative F-box protein At3g58860-like [Solanum
           lycopersicum]
          Length = 474

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 2/129 (1%)
 Frame = +1

Query: 19  LLKISDSTLESLLCEGLFTSQSPTSHNYTFHNLRRLEVSSKMSCVAITVLVYLLSALPNL 198
           L KIS + + S   E LF +         F++L  LE+S ++   +I  L+ LL  LP L
Sbjct: 314 LHKISAARISSRAIESLFIADIEKDRLPVFYSLTHLELSMELENHSIGPLMELLQCLPKL 373

Query: 199 ESIVIAQGFSVFNQV--DDFGRRKLPECLLLQLKAVELREFYGTKRELNVINFFLKESLV 372
           +S+  ++G      +  DD+  R +P C L  LK V+   F+G   E++ +   L+ +LV
Sbjct: 374 QSLHFSEGLDPCIHLCEDDWSLRSVPPCFLSSLKTVKYSNFHGNDTEISFLRNLLEIALV 433

Query: 373 LQTMDIVFS 399
           L+ ++IV S
Sbjct: 434 LEKLNIVCS 442


>ref|XP_006366040.1| PREDICTED: putative F-box protein At3g58860-like [Solanum
           tuberosum]
          Length = 474

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
 Frame = +1

Query: 1   GISNAKLLKISDSTLESLLCEGLFTSQSPTSHNYTFHNLRRLEVSSKMSCVAITVLVYLL 180
           G+      +IS+  +ESL    +   Q P      F+NL  LE+S ++   +I  L  LL
Sbjct: 313 GLHKISAARISNRAIESLFIADIEKDQLPI-----FYNLTHLELSMELENHSIGPLKELL 367

Query: 181 SALPNLESIVIAQGFSVFNQV--DDFGRRKLPECLLLQLKAVELREFYGTKRELNVINFF 354
             LP L+S+  ++G      +  DD+  R +P C L  LK V+   F+G   E++ +   
Sbjct: 368 QCLPKLQSLHFSEGLDPCMHLCEDDWNLRSVPPCFLSSLKTVKYSNFHGNDTEISFLRNL 427

Query: 355 LKESLVLQTMDIVFS 399
           L+ ++VL+ ++IV S
Sbjct: 428 LEIAIVLEKLNIVCS 442


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 6/135 (4%)
 Frame = +1

Query: 4   ISNAKLLKISDSTLESLLCEGLFTSQSPTSHNY---TFHNLRRLEVSSKMSCVAITVLVY 174
           ISN K L ++  TL+SL         S T  +Y   TFHN+ RLE    +       L  
Sbjct: 303 ISNVKCLSLTGVTLDSL---------SGTIGDYKLPTFHNMTRLEFLF-IGGFNWDFLPN 352

Query: 175 LLSALPNLESIVIAQGFSVFNQVDDFG---RRKLPECLLLQLKAVELREFYGTKRELNVI 345
            L + PNLE++VI  G++  N++   G     ++P CL+L LK +E+R   G   EL  +
Sbjct: 353 FLHSSPNLEALVIETGYT--NELIPEGWLMPLQVPACLVLHLKEIEIRRIVGEDYELEAV 410

Query: 346 NFFLKESLVLQTMDI 390
            + LK + VLQ M I
Sbjct: 411 EYLLKNAEVLQQMTI 425


>ref|XP_002880735.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326574|gb|EFH56994.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 44/136 (32%), Positives = 73/136 (53%), Gaps = 1/136 (0%)
 Frame = +1

Query: 1   GISNAKLLKISDSTLESLLCEGLFTSQSPTSHNYTFHNLRRLEVSSKMSCVAITVLVYLL 180
           GIS  + + IS  TLE L    L++   P      F NL RL+ +   S   +  L+  L
Sbjct: 288 GISCIRDMIISQRTLEVLY---LYSKLGPIPK---FDNLYRLQAAFSRSMFQL--LLVFL 339

Query: 181 SALPNLESIVIAQGFSVFNQVDDFGRRKLPECLLLQLKAVELRE-FYGTKRELNVINFFL 357
            + PNLE++++   F+V  + +  G   +P+CLL  L+ VE+RE   G +    ++++FL
Sbjct: 340 ESCPNLENLIL--DFAVSTEPEQDGLTYVPQCLLSTLECVEIRELIMGEETGKKLVSYFL 397

Query: 358 KESLVLQTMDIVFSST 405
           K S+VLQ + + F  +
Sbjct: 398 KNSVVLQKLIVRFKDS 413


>ref|XP_006294221.1| hypothetical protein CARUB_v10023218mg [Capsella rubella]
           gi|482562929|gb|EOA27119.1| hypothetical protein
           CARUB_v10023218mg [Capsella rubella]
          Length = 445

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
 Frame = +1

Query: 1   GISNAKLLKISDSTLESLLCEGLFTSQSPTSHNYT-------FHNLRRLEVSSKMSCVAI 159
           G+S+ + + IS  TLE L             H Y+       F NL RL+ +   S + +
Sbjct: 292 GVSSVRQMIISQPTLEVL-------------HRYSKLGPIPKFDNLYRLQATISWSMLHL 338

Query: 160 TVLVYLLSALPNLESIVIAQGFSVFNQVDDFGRRKLPECLLLQLKAVELREF-YGTKREL 336
             L+  L + PNL+++++   F V  + +  G + +P+CLL  L++VE+RE   G +   
Sbjct: 339 --LLGFLESFPNLKNLIL--DFVVSTEPEQDGLKLVPQCLLSSLESVEIRELVMGEETGK 394

Query: 337 NVINFFLKESLVLQTMDIVFSSTFPLSWKDFSTFPQ 444
            ++ +FL+ SLVLQ + + F   + +S +D   F +
Sbjct: 395 KLVKYFLENSLVLQKLTLRFED-YSISNQDSDIFKE 429


Top