BLASTX nr result

ID: Papaver27_contig00028884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00028884
         (890 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_199762.1| putative prefoldin subunit 3 [Arabidopsis thali...    53   6e-06
ref|XP_006395057.1| hypothetical protein EUTSA_v10004957mg [Eutr...    53   6e-06

>ref|NP_199762.1| putative prefoldin subunit 3 [Arabidopsis thaliana]
           gi|79330420|ref|NP_001032045.1| putative prefoldin
           subunit 3 [Arabidopsis thaliana]
           gi|12230431|sp|P57741.1|PFD3_ARATH RecName:
           Full=Probable prefoldin subunit 3
           gi|13878183|gb|AAK44169.1|AF370354_1 putative von
           Hippel-Lindau binding protein [Arabidopsis thaliana]
           gi|10177617|dbj|BAB10764.1| von Hippel-Lindau binding
           protein (VHL binding protein; VBP) like [Arabidopsis
           thaliana] gi|16323366|gb|AAL15177.1| putative von
           Hippel-Lindau binding protein [Arabidopsis thaliana]
           gi|222423655|dbj|BAH19795.1| AT5G49510 [Arabidopsis
           thaliana] gi|332008439|gb|AED95822.1| putative prefoldin
           subunit 3 [Arabidopsis thaliana]
           gi|332008440|gb|AED95823.1| putative prefoldin subunit 3
           [Arabidopsis thaliana]
          Length = 195

 Score = 53.1 bits (126), Expect(2) = 6e-06
 Identities = 29/43 (67%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
 Frame = -1

Query: 398 AYLQFLRDLVTVKQVTITLLYNWDVYQCRIKHV--TTIAVRDS 276
           A LQFLRD VTV QVTI  +YNWDV+Q R+K V  T IAV DS
Sbjct: 153 ADLQFLRDQVTVTQVTIARVYNWDVHQRRVKQVTPTAIAVADS 195



 Score = 24.3 bits (51), Expect(2) = 6e-06
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = -2

Query: 445 ARALLQKNIDNAKASM 398
           A ALL+ N++NAKAS+
Sbjct: 133 ASALLKNNLENAKASL 148


>ref|XP_006395057.1| hypothetical protein EUTSA_v10004957mg [Eutrema salsugineum]
           gi|557091696|gb|ESQ32343.1| hypothetical protein
           EUTSA_v10004957mg [Eutrema salsugineum]
          Length = 195

 Score = 53.1 bits (126), Expect(2) = 6e-06
 Identities = 25/38 (65%), Positives = 30/38 (78%)
 Frame = -1

Query: 398 AYLQFLRDLVTVKQVTITLLYNWDVYQCRIKHVTTIAV 285
           A LQFLRD VTV QVTI  +YNWDV+Q R+K VT+ A+
Sbjct: 153 ADLQFLRDQVTVTQVTIARIYNWDVHQRRVKQVTSTAI 190



 Score = 24.3 bits (51), Expect(2) = 6e-06
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = -2

Query: 445 ARALLQKNIDNAKASM 398
           A ALL+ N++NAKAS+
Sbjct: 133 ATALLKNNLENAKASL 148


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