BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00028667
         (1654 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29879.3| unnamed protein product [Vitis vinifera]              818   0.0  
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   818   0.0  
emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]   806   0.0  
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   752   0.0  
ref|XP_006850181.1| hypothetical protein AMTR_s00022p00245030 [A...   752   0.0  
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...   737   0.0  
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...   736   0.0  
ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phas...   735   0.0  
ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I sub...   731   0.0  
gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus...   731   0.0  
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub...   729   0.0  
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub...   726   0.0  
ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Me...   716   0.0  
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...   716   0.0  
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   714   0.0  
gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlise...   704   0.0  
ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prun...   703   0.0  
ref|XP_003559192.1| PREDICTED: DNA-directed RNA polymerase I sub...   693   0.0  
ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arab...   689   0.0  
ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana...   689   0.0  

>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  818 bits (2112), Expect = 0.0
 Identities = 411/576 (71%), Positives = 466/576 (80%), Gaps = 25/576 (4%)
 Frame = -1

Query: 1654 LNLTYPERVTPWNVNKLKEAILTGGEEHPGATHYVDKYSSVKLPKAKQKRFAYARKLPTS 1475
            L LTYPE+VTPWNV KL++AI+ G E HPGATHYVDK S+VKL   K+ R + +RKLP+S
Sbjct: 469  LRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSS 528

Query: 1474 RGVLTQTGRSVEQELEGKVVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 1295
            RGV+ Q GRS + E EGK+VYRHL+DGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH
Sbjct: 529  RGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 588

Query: 1294 YANCSVYNADFDGDEMNVHFPQDEISRAEGYHIVNANNQYLVPTSGEPKRGLIQDHIISA 1115
            YANCS YNADFDGDEMNVHFPQDEISRAE Y+IVNANNQY+VP+ G+P RGLIQDHI+SA
Sbjct: 589  YANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLIQDHIVSA 648

Query: 1114 VLLTKKDTFFTRDEYNYLLYSSGVSAAVRNSSSGASRKKIYMINSEDELEGAPPAIWKPE 935
            VLLTKKDTF TR++YN LLYSSG+S+    S  G   KK+ +++SEDE++   PAIWKPE
Sbjct: 649  VLLTKKDTFLTREQYNQLLYSSGLSSG-SGSFIGKPGKKVSVLDSEDEMQPLLPAIWKPE 707

Query: 934  PLWTGKQVISSILHHITRTRGLAPFTIEKSGKVPSEYFGNS------------------- 812
            PLW+GKQVI+++L+HITR  G  PFT EK GK+P EYFG+                    
Sbjct: 708  PLWSGKQVITAVLNHITR--GRKPFTTEKDGKIPREYFGSEIDEKKSGKGKDPGSDRRKE 765

Query: 811  ------SGEFMLRIQKNELVHGVIDKNQFEKHGLVHTVQELYGSNVAGILLSVLSRLFTL 650
                   GE+ L I KNELV GVIDK QF+K+GLVH VQELYGSN AGILLSVLSRLFT+
Sbjct: 766  KRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILLSVLSRLFTV 825

Query: 649  YLQMHGFTCGVDDLLITPDVETKRTSILEKSEEIGKKVHCQFVGSADGDIDPTTLQAETE 470
            +LQMHGFTCGVDDLLI+P+ +  R   L+KSE IG+ VHC+F+GS  G IDP  LQ E E
Sbjct: 826  FLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGKIDPVKLQVEVE 885

Query: 469  KTIRNNAESATTRLDRMMSSALNGTTSQVNKELFPKGLQKPFPKNCLSLMTTTGAKGGLV 290
            K I +N E+A TRLDRMM + LN  TS+VNK+L  KGL KPFPKNCLSLMTTTGAKG  V
Sbjct: 886  KIILSNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCLSLMTTTGAKGSTV 945

Query: 289  NFTQISSLLGQQELEGKRVPRMVSGKTLPCFHPWDPASRAGGFISDRFLTGLRPQEYYFH 110
            NF+QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD A+RAGGFISDRFLTGL PQEYYFH
Sbjct: 946  NFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTGLHPQEYYFH 1005

Query: 109  CMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVGY 2
            CMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKV Y
Sbjct: 1006 CMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCY 1041


>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score =  818 bits (2112), Expect = 0.0
 Identities = 411/576 (71%), Positives = 466/576 (80%), Gaps = 25/576 (4%)
 Frame = -1

Query: 1654 LNLTYPERVTPWNVNKLKEAILTGGEEHPGATHYVDKYSSVKLPKAKQKRFAYARKLPTS 1475
            L LTYPE+VTPWNV KL++AI+ G E HPGATHYVDK S+VKL   K+ R + +RKLP+S
Sbjct: 540  LRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSS 599

Query: 1474 RGVLTQTGRSVEQELEGKVVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 1295
            RGV+ Q GRS + E EGK+VYRHL+DGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH
Sbjct: 600  RGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 659

Query: 1294 YANCSVYNADFDGDEMNVHFPQDEISRAEGYHIVNANNQYLVPTSGEPKRGLIQDHIISA 1115
            YANCS YNADFDGDEMNVHFPQDEISRAE Y+IVNANNQY+VP+ G+P RGLIQDHI+SA
Sbjct: 660  YANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLIQDHIVSA 719

Query: 1114 VLLTKKDTFFTRDEYNYLLYSSGVSAAVRNSSSGASRKKIYMINSEDELEGAPPAIWKPE 935
            VLLTKKDTF TR++YN LLYSSG+S+    S  G   KK+ +++SEDE++   PAIWKPE
Sbjct: 720  VLLTKKDTFLTREQYNQLLYSSGLSSG-SGSFIGKPGKKVSVLDSEDEMQPLLPAIWKPE 778

Query: 934  PLWTGKQVISSILHHITRTRGLAPFTIEKSGKVPSEYFGNS------------------- 812
            PLW+GKQVI+++L+HITR  G  PFT EK GK+P EYFG+                    
Sbjct: 779  PLWSGKQVITAVLNHITR--GRKPFTTEKDGKIPREYFGSEIDEKKSGKGKDPGSDRRKE 836

Query: 811  ------SGEFMLRIQKNELVHGVIDKNQFEKHGLVHTVQELYGSNVAGILLSVLSRLFTL 650
                   GE+ L I KNELV GVIDK QF+K+GLVH VQELYGSN AGILLSVLSRLFT+
Sbjct: 837  KRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILLSVLSRLFTV 896

Query: 649  YLQMHGFTCGVDDLLITPDVETKRTSILEKSEEIGKKVHCQFVGSADGDIDPTTLQAETE 470
            +LQMHGFTCGVDDLLI+P+ +  R   L+KSE IG+ VHC+F+GS  G IDP  LQ E E
Sbjct: 897  FLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGKIDPVKLQVEVE 956

Query: 469  KTIRNNAESATTRLDRMMSSALNGTTSQVNKELFPKGLQKPFPKNCLSLMTTTGAKGGLV 290
            K I +N E+A TRLDRMM + LN  TS+VNK+L  KGL KPFPKNCLSLMTTTGAKG  V
Sbjct: 957  KIILSNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCLSLMTTTGAKGSTV 1016

Query: 289  NFTQISSLLGQQELEGKRVPRMVSGKTLPCFHPWDPASRAGGFISDRFLTGLRPQEYYFH 110
            NF+QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD A+RAGGFISDRFLTGL PQEYYFH
Sbjct: 1017 NFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTGLHPQEYYFH 1076

Query: 109  CMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVGY 2
            CMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKV Y
Sbjct: 1077 CMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCY 1112


>emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]
          Length = 1350

 Score =  806 bits (2083), Expect = 0.0
 Identities = 411/594 (69%), Positives = 466/594 (78%), Gaps = 43/594 (7%)
 Frame = -1

Query: 1654 LNLTYPERVTPWNVNKLKEAILTGGEEHPGATHYVDKYSSVKLPKAKQKRFAYARKLPTS 1475
            L LTYPE+VTPWNV KL++AI+ G E HPGATHYVDK S+VKL   K+ R + +RKLP+S
Sbjct: 588  LRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSS 647

Query: 1474 RGVLTQTGRSVEQELEGKVVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 1295
            RGV+ Q GRS + E EGK+VYRHL+DGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH
Sbjct: 648  RGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 707

Query: 1294 YANC------------------SVYNADFDGDEMNVHFPQDEISRAEGYHIVNANNQYLV 1169
            YANC                  S YNADFDGDEMNVHFPQDEISRAE Y+IVNANNQY+V
Sbjct: 708  YANCRVESEHISMLDLDDCSDSSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIV 767

Query: 1168 PTSGEPKRGLIQDHIISAVLLTKKDTFFTRDEYNYLLYSSGVSAAVRNSSSGASRKKIYM 989
            P+ G+P RGLIQDHI+SAVLLTKKDTF TR++YN LLYSSG+S+    S  G   KK+ +
Sbjct: 768  PSRGDPIRGLIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGLSSG-SGSFIGKPGKKVSV 826

Query: 988  INSEDELEGAPPAIWKPEPLWTGKQVISSILHHITRTRGLAPFTIEKSGKVPSEYFGNS- 812
            ++SEDE++   PAIWKPEPLW+GKQVI+++L+HITR  G  PFT EK GK+P EYFG+  
Sbjct: 827  LDSEDEMQPLLPAIWKPEPLWSGKQVITAVLNHITR--GRKPFTTEKDGKIPREYFGSEI 884

Query: 811  ------------------------SGEFMLRIQKNELVHGVIDKNQFEKHGLVHTVQELY 704
                                     GE+ L I KNELV GVIDK QF+K+GLVH VQELY
Sbjct: 885  DEKKSGKGKDPGSDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELY 944

Query: 703  GSNVAGILLSVLSRLFTLYLQMHGFTCGVDDLLITPDVETKRTSILEKSEEIGKKVHCQF 524
            GSN AGILLSVLSRLFT++LQMHGFTCGVDDLLI+P+ +  R   L+KSE IG+ VHC+F
Sbjct: 945  GSNTAGILLSVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKF 1004

Query: 523  VGSADGDIDPTTLQAETEKTIRNNAESATTRLDRMMSSALNGTTSQVNKELFPKGLQKPF 344
            +GS  G IDP  LQ E EK I +N E+A TRLDRMM + LN  TS+VNK+L  KGL KPF
Sbjct: 1005 IGSNHGKIDPVKLQVEVEKIILSNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVKPF 1064

Query: 343  PKNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFHPWDPASRAGG 164
            PKNCLSLMTTTGAKG  VNF+QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD A+RAGG
Sbjct: 1065 PKNCLSLMTTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGG 1124

Query: 163  FISDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVGY 2
            FISDRFLTGL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKV Y
Sbjct: 1125 FISDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCY 1178


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score =  752 bits (1942), Expect = 0.0
 Identities = 382/576 (66%), Positives = 444/576 (77%), Gaps = 25/576 (4%)
 Frame = -1

Query: 1654 LNLTYPERVTPWNVNKLKEAILTGGEEHPGATHYVDKYSSVKLPKAKQKRFAYARKLPTS 1475
            + LTYPERVTPWN+ KL+ A++ G E HPGATHYVDK S  KLP A++ R + +RKLP+S
Sbjct: 468  VKLTYPERVTPWNIAKLRNAVINGSECHPGATHYVDKLSINKLPPARKARISISRKLPSS 527

Query: 1474 RGVLTQTGRSVEQELEGKVVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 1295
            RG +TQ G+  E E EGK+VYRHL+DGD+VLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH
Sbjct: 528  RGAVTQAGKGSECEFEGKIVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 587

Query: 1294 YANCSV-YNADFDGDEMNVHFPQDEISRAEGYHIVNANNQYLVPTSGEPKRGLIQDHIIS 1118
            YANCS+ YNADFDGDEMNVHFPQDE+SRAE Y+IVNANNQ++ P++GEP RGLIQDHI+S
Sbjct: 588  YANCSITYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQFVRPSNGEPLRGLIQDHIVS 647

Query: 1117 AVLLTKKDTFFTRDEYNYLLYSSGVSAAVRNSSSGASRKKIYMINSEDELEGAPPAIWKP 938
            AVLLTKKDTF ++DE+N LLYSSGVS    NS  G   +K+    SEDE++  PPAIWKP
Sbjct: 648  AVLLTKKDTFLSQDEFNQLLYSSGVSTVGPNSFHGRPGQKVLWSRSEDEIQTLPPAIWKP 707

Query: 937  EPLWTGKQVISSILHHITRTRGLAPFTIEKSGKVPSEYFGNSSGEFM------------- 797
            +PLWTGKQVI++IL+HIT      PFT+EK  K+PS +F + + E               
Sbjct: 708  KPLWTGKQVITAILNHITSDH--PPFTVEKDAKIPSNFFKSRANEDKPCQEEKSDKDAPA 765

Query: 796  --------LRIQKNELVHGVIDKNQFEKHGLVHTVQELYGSNVAGILLSVLSRLFTLYLQ 641
                    + + KNELV GVIDK QF ++GLVHTV EL GS+ AGILLSVLSRLFT YLQ
Sbjct: 766  EKEPDEEKMLVYKNELVRGVIDKGQFGEYGLVHTVHELLGSHTAGILLSVLSRLFTAYLQ 825

Query: 640  MHGFTCGVDDLLITPDVETKRTSILEKSEEIGKKVHCQFVGSADGDI--DPTTLQAETEK 467
            MHGFTCGVDDLLI  + + +R   LE  E+ G+ VH  F+G  D  I  DP  +Q   EK
Sbjct: 826  MHGFTCGVDDLLILTNKDEERKKQLEWCEKSGEAVHRNFIGIKDEKIKIDPVAMQLNIEK 885

Query: 466  TIRNNAESATTRLDRMMSSALNGTTSQ-VNKELFPKGLQKPFPKNCLSLMTTTGAKGGLV 290
            TIR++ +SA   LDR MS+ LN  TS  V   L   GL KP  KNC+SLMTT+GAKG  V
Sbjct: 886  TIRSDGDSALAYLDRQMSNELNTKTSSGVISNLLSDGLLKPSGKNCISLMTTSGAKGSKV 945

Query: 289  NFTQISSLLGQQELEGKRVPRMVSGKTLPCFHPWDPASRAGGFISDRFLTGLRPQEYYFH 110
            NF QISS LGQQELEGKRVPRMVSGKTLPCFHPWD A+R+GG+I+DRFLTGLRPQEYYFH
Sbjct: 946  NFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARSGGYITDRFLTGLRPQEYYFH 1005

Query: 109  CMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVGY 2
            CMAGREGLVDTAVKTSRSGYLQRCLIKNLECLK+GY
Sbjct: 1006 CMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKIGY 1041


>ref|XP_006850181.1| hypothetical protein AMTR_s00022p00245030 [Amborella trichopoda]
            gi|548853779|gb|ERN11762.1| hypothetical protein
            AMTR_s00022p00245030 [Amborella trichopoda]
          Length = 1600

 Score =  752 bits (1941), Expect = 0.0
 Identities = 370/559 (66%), Positives = 441/559 (78%), Gaps = 10/559 (1%)
 Frame = -1

Query: 1648 LTYPERVTPWNVNKLKEAILTGGEEHPGATHYVDKYSSVKLP--------KAKQKRFAYA 1493
            LTYPE+VTPWN  +L++A+L G E HPGAT Y D+  +  L         K + +R + A
Sbjct: 398  LTYPEKVTPWNAERLRQAVLNGPEIHPGATLYHDEQGNTNLADNLNDSKYKNENRRNSIA 457

Query: 1492 RKLPTSRGVLTQ--TGRSVEQELEGKVVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLK 1319
            +KL ++ G ++   +G+      EGKVVYRH++DGDIVLVNRQPTLHKPS+MAHV R+LK
Sbjct: 458  KKLLSTPGAVSTDVSGKGFNSNFEGKVVYRHIQDGDIVLVNRQPTLHKPSMMAHVARILK 517

Query: 1318 GEKTLRMHYANCSVYNADFDGDEMNVHFPQDEISRAEGYHIVNANNQYLVPTSGEPKRGL 1139
            GEKTLRMHYANCS YNADFDGDEMNVHFPQDEI+RAE Y+IVNAN QY+VPTSGEP RGL
Sbjct: 518  GEKTLRMHYANCSSYNADFDGDEMNVHFPQDEIARAEAYNIVNANEQYIVPTSGEPIRGL 577

Query: 1138 IQDHIISAVLLTKKDTFFTRDEYNYLLYSSGVSAAVRNSSSGASRKKIYMINSEDELEGA 959
            IQDHI+SAVLLTKKDTF T++EY++LLYS+ VS    +   G   KKI ++ S++E+   
Sbjct: 578  IQDHIVSAVLLTKKDTFLTQEEYHHLLYSACVSTVAPDFKHGNLSKKISLVKSDEEIRPL 637

Query: 958  PPAIWKPEPLWTGKQVISSILHHITRTRGLAPFTIEKSGKVPSEYFGNSSGEFMLRIQKN 779
             PAIWKP+PLWTGKQVIS+IL H+TR  G  PFT++++G++P+ YFG  +GE+ + + KN
Sbjct: 638  LPAIWKPKPLWTGKQVISTILDHVTR--GQPPFTVKRAGRIPAGYFGKKNGEYKVLVHKN 695

Query: 778  ELVHGVIDKNQFEKHGLVHTVQELYGSNVAGILLSVLSRLFTLYLQMHGFTCGVDDLLIT 599
            ELVHGVIDK QF K GLVH V ELYG++ AG L SV +RLFT YLQMHGFTCGVDDLL+ 
Sbjct: 696  ELVHGVIDKAQFGKFGLVHAVHELYGASAAGRLFSVFTRLFTAYLQMHGFTCGVDDLLVR 755

Query: 598  PDVETKRTSILEKSEEIGKKVHCQFVGSADGDIDPTTLQAETEKTIRNNAESATTRLDRM 419
               E  R   L++SE IG  VH  F+G+ D ++DP  +QA  EK +R   ESA  RLDRM
Sbjct: 756  QCAEMDRRRKLDESETIGDHVHSWFIGAKDAEMDPIRMQAAIEKLVRGKGESAIARLDRM 815

Query: 418  MSSALNGTTSQVNKELFPKGLQKPFPKNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGK 239
            MSSALN  TS+VN  LFP+GL K FP NCLSLMT++GAKGGLVNFTQISSLLGQQELEGK
Sbjct: 816  MSSALNRLTSEVNNSLFPEGLSKSFPSNCLSLMTSSGAKGGLVNFTQISSLLGQQELEGK 875

Query: 238  RVPRMVSGKTLPCFHPWDPASRAGGFISDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSR 59
            RVPRMVSGKTLPCF PWD A+RAGGFISDRFL GLRPQEYYFHCMAGREGLVDTA+KT+R
Sbjct: 876  RVPRMVSGKTLPCFLPWDSAARAGGFISDRFLNGLRPQEYYFHCMAGREGLVDTAIKTAR 935

Query: 58   SGYLQRCLIKNLECLKVGY 2
            SGYLQR L+KNLECL+V Y
Sbjct: 936  SGYLQRRLMKNLECLRVNY 954


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1651

 Score =  737 bits (1903), Expect = 0.0
 Identities = 379/570 (66%), Positives = 439/570 (77%), Gaps = 19/570 (3%)
 Frame = -1

Query: 1654 LNLTYPERVTPWNVNKLKEAILTGGEEHPGATHYVDKYSSVKLPKAKQKRFAYARKLPTS 1475
            L L+YPERVTPWNV KL+ AIL G E HPGATHY DK S VKLP   +     +RKLPTS
Sbjct: 458  LRLSYPERVTPWNVVKLRNAILNGPESHPGATHYADKVSIVKLPPKGKLLSLTSRKLPTS 517

Query: 1474 RGVLTQTGRSVEQELEGKVVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 1295
            RGV+   G+  + E EGKVVYRHL+DGD+VLVNRQPTLHKPSIMAH+VRVLKGEKT+RMH
Sbjct: 518  RGVILHQGKISDHEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHIVRVLKGEKTVRMH 577

Query: 1294 YANCSVYNADFDGDEMNVHFPQDEISRAEGYHIVNANNQYLVPTSGEPKRGLIQDHIISA 1115
            YANCS YNADFDGDE+NVHFPQDEISRAE Y+IVNANNQY+ PTSG+P R LIQDHI+SA
Sbjct: 578  YANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIVSA 637

Query: 1114 VLLTKKDTFFTRDEYNYLLYSSGVSAAVRNSSSGASRKKIYMINSEDELEGAPPAIWKPE 935
             LLTKKDTF + +E+N LLYSSGVS A   S  G   +K+++ NSE E+   PPAIWKPE
Sbjct: 638  ALLTKKDTFLSYEEFNQLLYSSGVSMAGLGSFYGKHGQKVFISNSESEMFLFPPAIWKPE 697

Query: 934  PLWTGKQVISSILHHITRTRGLAPFTIEKSGKVPSEYF-----------------GNSSG 806
            PLWTGKQVIS++L++I  TRG  PFT EK+ K+PS +F                  +   
Sbjct: 698  PLWTGKQVISALLYYI--TRGSPPFTAEKNAKIPSNFFKTQIRKGKRYTEDTSKKKDKPD 755

Query: 805  EFMLRIQKNELVHGVIDKNQFEKHGLVHTVQELYGSNVAGILLSVLSRLFTLYLQMHGFT 626
            E  L I KN+LV GV+DK QF  +G++HTVQELYGSNVAG LLS LSRLFT +LQMHGFT
Sbjct: 756  EDKLLIYKNDLVRGVVDKAQFGDYGMIHTVQELYGSNVAGNLLSALSRLFTTFLQMHGFT 815

Query: 625  CGVDDLLITPDVETKRTSILEKSEEIGKKVHCQFVGSADGD-IDPTTLQAETEKTIRNNA 449
            CGVDDL++T   + +R + L+  E IG  VH +F+G  + D IDP TLQ   EK IR+N 
Sbjct: 816  CGVDDLMLTEGKDVERMNQLKSCEIIGDSVHREFIGVKNSDNIDPVTLQLNIEKKIRSNG 875

Query: 448  ESATTRLDRMMSSALNG-TTSQVNKELFPKGLQKPFPKNCLSLMTTTGAKGGLVNFTQIS 272
            E+A T LDR M+S LN  T+S + K+L  +G+ KP  KNC+SLMTT+GAKG +VNF QIS
Sbjct: 876  EAALT-LDRKMTSNLNSRTSSGILKKLLSEGILKPSGKNCISLMTTSGAKGSMVNFQQIS 934

Query: 271  SLLGQQELEGKRVPRMVSGKTLPCFHPWDPASRAGGFISDRFLTGLRPQEYYFHCMAGRE 92
            S LGQQELEGKRVPRMVSGKTLPCF PWD + RAGGFI DRFLT L PQEYYFHCMAGRE
Sbjct: 935  SHLGQQELEGKRVPRMVSGKTLPCFPPWDCSPRAGGFIIDRFLTALHPQEYYFHCMAGRE 994

Query: 91   GLVDTAVKTSRSGYLQRCLIKNLECLKVGY 2
            GLVDTAVKTSRSGYLQRCL+KNLECLKV Y
Sbjct: 995  GLVDTAVKTSRSGYLQRCLMKNLECLKVCY 1024


>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            tuberosum]
          Length = 1675

 Score =  736 bits (1900), Expect = 0.0
 Identities = 368/566 (65%), Positives = 435/566 (76%), Gaps = 15/566 (2%)
 Frame = -1

Query: 1654 LNLTYPERVTPWNVNKLKEAILTGGEEHPGATHYVDKYSSVKLPKAKQKRFAYARKLPTS 1475
            L LTYPER+TPWN  K+++A++ G E HPGA  + D+ ++VKLP  K+ R A +RKLP+S
Sbjct: 476  LRLTYPERLTPWNAVKMRDAVINGPENHPGAVSFADRIATVKLPSNKKMRVAISRKLPSS 535

Query: 1474 RGVLTQTGRSVEQELEGKVVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 1295
            RG +TQ+GR+ E E EGKVVYRHL+DGD+VLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH
Sbjct: 536  RGAVTQSGRNNEYEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 595

Query: 1294 YANCSVYNADFDGDEMNVHFPQDEISRAEGYHIVNANNQYLVPTSGEPKRGLIQDHIISA 1115
            YANCS YNADFDGDEMNVHFPQDEISRAE Y+IVNAN QY+VPT G+  RGLIQDHI+ A
Sbjct: 596  YANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVGA 655

Query: 1114 VLLTKKDTFFTRDEYNYLLYSSGVSAAVRNSSSGASRKKIYMINSEDELEGAPPAIWKPE 935
            V+LT K+TF T  E+N LLY SGV AA    +SG    K+ +++ E  ++   PA+WKP+
Sbjct: 656  VILTMKNTFLTLHEFNQLLYGSGVFAAGPAPTSGNHSNKVSVVDFEGVVQTVLPAVWKPK 715

Query: 934  PLWTGKQVISSILHHITRTRGLAPFTIEKSGKVPSEYFGNSS---------------GEF 800
            PLWTGKQVI+++L+H+  T+G AP T++  GK+P  YF + S                E 
Sbjct: 716  PLWTGKQVITALLNHL--TKGCAPCTVKNKGKIPYPYFLSESRLVEYQSREEQEDRTAEN 773

Query: 799  MLRIQKNELVHGVIDKNQFEKHGLVHTVQELYGSNVAGILLSVLSRLFTLYLQMHGFTCG 620
               I KNELV GVIDK QF K GLVHT+QELYGSN AGILLS LSRLFT++LQ+HGFTCG
Sbjct: 774  EFLIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNKAGILLSALSRLFTIFLQLHGFTCG 833

Query: 619  VDDLLITPDVETKRTSILEKSEEIGKKVHCQFVGSADGDIDPTTLQAETEKTIRNNAESA 440
            VDDL+I P  + +R   LE  +++G++ HC FV    G+I P  LQ E EK + +N E+A
Sbjct: 834  VDDLVILPHYDIRRKEELE-GDDVGEEAHCDFVKFKRGEIGPLELQLEIEKAMSSNKEAA 892

Query: 439  TTRLDRMMSSALNGTTSQVNKELFPKGLQKPFPKNCLSLMTTTGAKGGLVNFTQISSLLG 260
            T  LD  M + L    SQ NKEL  KGL KPFP+NC++LMT TGAKG  VNF QISS LG
Sbjct: 893  TAALDMKMKNKLANKGSQFNKELLLKGLLKPFPRNCIALMTITGAKGSTVNFQQISSYLG 952

Query: 259  QQELEGKRVPRMVSGKTLPCFHPWDPASRAGGFISDRFLTGLRPQEYYFHCMAGREGLVD 80
            QQELEGKRVPRMVSGKTLPCF PWD ASRAGG++SDRFL+GLRPQEYYFHCMAGREGLVD
Sbjct: 953  QQELEGKRVPRMVSGKTLPCFPPWDCASRAGGYVSDRFLSGLRPQEYYFHCMAGREGLVD 1012

Query: 79   TAVKTSRSGYLQRCLIKNLECLKVGY 2
            TAVKTSRSGYLQRCLIKNLE LKV Y
Sbjct: 1013 TAVKTSRSGYLQRCLIKNLESLKVCY 1038


>ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
            gi|561018822|gb|ESW17626.1| hypothetical protein
            PHAVU_007G255400g [Phaseolus vulgaris]
          Length = 1637

 Score =  735 bits (1897), Expect = 0.0
 Identities = 376/571 (65%), Positives = 436/571 (76%), Gaps = 20/571 (3%)
 Frame = -1

Query: 1654 LNLTYPERVTPWNVNKLKEAILTGGEEHPGATHYVDKYSSVKLPKAKQKRFAYARKLPTS 1475
            L L+YPERVTPWNV  L+ AIL G + HPGATHY D+ ++VKLP   +     +RKLP+S
Sbjct: 446  LRLSYPERVTPWNVTMLRNAILNGPQSHPGATHYTDQQATVKLPPNGKLLSFISRKLPSS 505

Query: 1474 RGVLTQTGRSVEQELEGKVVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 1295
            RGV+   G+  +QE EGK+VYRHL+DGD+VLVNRQPTLHKPSIMAHVVRVLKGEKT+RMH
Sbjct: 506  RGVILDHGKISDQEFEGKIVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTVRMH 565

Query: 1294 YANCSVYNADFDGDEMNVHFPQDEISRAEGYHIVNANNQYLVPTSGEPKRGLIQDHIISA 1115
            YANCS YNADFDGDE+NVHFPQDEISRAE Y+IVNANNQY+ PTSG+P R LIQDHI+SA
Sbjct: 566  YANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIVSA 625

Query: 1114 VLLTKKDTFFTRDEYNYLLYSSGVSAAVRNSSSGASRKKIYMINSEDELEGAPPAIWKPE 935
             LLTKKDTF T + +  LLYSSGVS     S SG   +K++M NSE E+   PPAIWKPE
Sbjct: 626  ALLTKKDTFITYEVFIQLLYSSGVSMTGLGSFSGKHGQKVFMTNSEFEMFLFPPAIWKPE 685

Query: 934  PLWTGKQVISSILHHITRTRGLAPFTIEKSGKVPSEYFGNS------------------S 809
            PLWTGKQVIS++L++ITR     PFT+EK+ K+PS +F                      
Sbjct: 686  PLWTGKQVISALLYYITRDS--PPFTVEKNAKIPSNFFKTQVRDGKRHTRDKSRNKVEPD 743

Query: 808  GEFMLRIQKNELVHGVIDKNQFEKHGLVHTVQELYGSNVAGILLSVLSRLFTLYLQMHGF 629
             E  L I KN+LV GV+DK QF  +G++HTVQELYGS VAG LLS LSRLFT +LQMHGF
Sbjct: 744  DEDKLLIYKNDLVRGVVDKAQFGDYGIIHTVQELYGSKVAGNLLSALSRLFTTFLQMHGF 803

Query: 628  TCGVDDLLITPDVETKRTSILEKSEEIGKKVHCQFVGSADGD-IDPTTLQAETEKTIRNN 452
            TCGVDDL+IT + + +R   L   EEIG  VH +F+G  + D IDP TLQ   EK IR+N
Sbjct: 804  TCGVDDLMITEEKDVERMDQLRSCEEIGDIVHREFIGVMNSDIIDPITLQLNIEKKIRSN 863

Query: 451  AESATTRLDRMMSSALNG-TTSQVNKELFPKGLQKPFPKNCLSLMTTTGAKGGLVNFTQI 275
             E+A T LDR M+S LN  T+S + K+L   G+ KP  KNC+SLMTT+GAKG +VNF QI
Sbjct: 864  GEAALTYLDRKMTSNLNSRTSSGILKDLLSDGILKPSGKNCISLMTTSGAKGSMVNFQQI 923

Query: 274  SSLLGQQELEGKRVPRMVSGKTLPCFHPWDPASRAGGFISDRFLTGLRPQEYYFHCMAGR 95
            SS LGQQELEGKRVPRMVSGKTLPCF PWD + RAGGFI DRFLTGL PQEYYFHCMAGR
Sbjct: 924  SSHLGQQELEGKRVPRMVSGKTLPCFAPWDCSPRAGGFIIDRFLTGLHPQEYYFHCMAGR 983

Query: 94   EGLVDTAVKTSRSGYLQRCLIKNLECLKVGY 2
            EGLVDTAVKTSRSGYLQRCL+KNLECLKV Y
Sbjct: 984  EGLVDTAVKTSRSGYLQRCLMKNLECLKVCY 1014


>ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1660

 Score =  731 bits (1887), Expect = 0.0
 Identities = 377/570 (66%), Positives = 439/570 (77%), Gaps = 19/570 (3%)
 Frame = -1

Query: 1654 LNLTYPERVTPWNVNKLKEAILTGGEEHPGATHYVDKYSSVKLPKAKQKRFAYARKLPTS 1475
            L LTYPERVTPWNV +L+ AIL G E HPGAT Y DK S++KLP  ++ R   +R+L +S
Sbjct: 453  LRLTYPERVTPWNVVELRNAILNGPETHPGATLYADKTSTLKLPLDRRSRSLTSRRLQSS 512

Query: 1474 RGVLTQTGRSVEQELEGKVVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 1295
            RGV+   G+  + E EGKVVYRHL+DGD+VLVNRQPTLHKPSIMAHVVRVLKGEKT+RMH
Sbjct: 513  RGVIMHNGKIHDNEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTVRMH 572

Query: 1294 YANCSVYNADFDGDEMNVHFPQDEISRAEGYHIVNANNQYLVPTSGEPKRGLIQDHIISA 1115
            YANCS YNADFDGDE+NVHFPQDEISRAE Y+IVNANNQY+ PTSG+P R LIQDHI+SA
Sbjct: 573  YANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIVSA 632

Query: 1114 VLLTKKDTFFTRDEYNYLLYSSGVSAAVRNSSSGASRKKIYMINSEDELEGAPPAIWKPE 935
             LLTKKDTF + +E+N LLYSSGVS        G   +KI+M NS+ E+   PPAI+KPE
Sbjct: 633  ALLTKKDTFLSCEEFNQLLYSSGVSMTGMGPFPGKPGQKIFMSNSDSEMFLFPPAIFKPE 692

Query: 934  PLWTGKQVISSILHHITRTRGLAPFTIEKSGKVPSEYF-----------------GNSSG 806
            PLWTGKQVIS++L++I  T+G  PFT+EK+ K+PS +F                  +   
Sbjct: 693  PLWTGKQVISALLYYI--TKGSPPFTVEKNAKIPSSFFKTRMREGKKRTKDTSIKKDEPD 750

Query: 805  EFMLRIQKNELVHGVIDKNQFEKHGLVHTVQELYGSNVAGILLSVLSRLFTLYLQMHGFT 626
            E  L I KN+LV GV+DK QF  +G+VHTVQE YGSN AG LLS LSRLFT +LQMHGFT
Sbjct: 751  EDKLLIYKNDLVRGVVDKAQFGDYGIVHTVQEFYGSNTAGFLLSALSRLFTNFLQMHGFT 810

Query: 625  CGVDDLLITPDVETKRTSILEKSEEIGKKVHCQFVGSADGD-IDPTTLQAETEKTIRNNA 449
            CGVDDLL+T   +++RT+ LE  EEIG  VH +F+G  +GD IDP T+Q   EK IR+N 
Sbjct: 811  CGVDDLLLTEGKDSERTNQLESCEEIGDIVHREFIGVMEGDNIDPITMQLNVEKKIRSNG 870

Query: 448  ESATTRLDRMMSSALNG-TTSQVNKELFPKGLQKPFPKNCLSLMTTTGAKGGLVNFTQIS 272
            E+A T LDR M S LN  T+S V KEL  +G+ KP  KN +SLMTT+GAKG +VNF QIS
Sbjct: 871  EAAITYLDRKMISNLNSRTSSGVLKELLSEGILKPSGKNWISLMTTSGAKGSMVNFQQIS 930

Query: 271  SLLGQQELEGKRVPRMVSGKTLPCFHPWDPASRAGGFISDRFLTGLRPQEYYFHCMAGRE 92
            S LGQQELEGKRVPRMVSGKTLPCF  WD + RAGGFI DRFLT LRPQEYYFHCMAGRE
Sbjct: 931  SHLGQQELEGKRVPRMVSGKTLPCFTSWDCSPRAGGFIIDRFLTALRPQEYYFHCMAGRE 990

Query: 91   GLVDTAVKTSRSGYLQRCLIKNLECLKVGY 2
            GLVDTAVKTSRSGYLQRCL+KNLECLKV Y
Sbjct: 991  GLVDTAVKTSRSGYLQRCLMKNLECLKVCY 1020


>gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus guttatus]
          Length = 1719

 Score =  731 bits (1886), Expect = 0.0
 Identities = 375/566 (66%), Positives = 434/566 (76%), Gaps = 15/566 (2%)
 Frame = -1

Query: 1654 LNLTYPERVTPWNVNKLKEAILTGGEEHPGATHYVDKYSSVKLPKAKQKRFAYARKLPTS 1475
            L LTYPERVTPWN  KL+ A++ G + HPGAT YVD  + VKLP +++ R A +RKLP+S
Sbjct: 499  LKLTYPERVTPWNAAKLRGAVVNGPDIHPGATTYVDSVTIVKLPPSQKMRVAISRKLPSS 558

Query: 1474 RGVLTQTGRSVEQELEGKVVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 1295
            RGV+TQ+G+  + E EGK V+RHL+DGDIVLVNRQPTLHKPSIMAHVVRVL GE+TLRMH
Sbjct: 559  RGVVTQSGKFDDLEFEGKTVHRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLHGERTLRMH 618

Query: 1294 YANCSVYNADFDGDEMNVHFPQDEISRAEGYHIVNANNQYLVPTSGEPKRGLIQDHIISA 1115
            YANCS YNADFDGDE+NVHFPQDEISRAE Y+IVNAN QY+VPT G+  RGLIQDHI+ A
Sbjct: 619  YANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVGA 678

Query: 1114 VLLTKKDTFFTRDEYNYLLYSSGVSAAVRNSSSGASRKKIYMINSEDELEGAPPAIWKPE 935
            VLLT K+TF  R E+N LLY SGV A+   S    + +K+ +I++E  +E   PAIWKPE
Sbjct: 679  VLLTMKNTFVNRSEFNQLLYGSGVFASGPGSLPKNNSRKVTLIDTEGVVESVLPAIWKPE 738

Query: 934  PLWTGKQVISSILHHITRTRGLAPFTIEKSGKVPSEY-FGNS----------SGEFMLRI 788
            PLWTGKQVI+++L+HI  TRG APFT+E  GK+P  Y FGNS          + E  L +
Sbjct: 739  PLWTGKQVITALLNHI--TRGCAPFTVENQGKIPKNYFFGNSYTRGEEDEDQNAEHNLLV 796

Query: 787  QKNELVHGVIDKNQFEKHGLVHTVQELYGSNVAGILLSVLSRLFTLYLQMHGFTCGVDDL 608
             KNELV GVIDK QF K GLVHTVQELYG++ AGI LS LSR+FTL+LQ+HGFTCGVDDL
Sbjct: 797  WKNELVRGVIDKAQFGKFGLVHTVQELYGASSAGIFLSALSRVFTLFLQIHGFTCGVDDL 856

Query: 607  LITPDVETKRTSILEKSEEIGKKVHCQFVGSADGDIDPTTLQAETEKTIRNNAESATTRL 428
            +I PD + +R   LE  E++G+ VHC FV    G I P  LQ E EK I  + ESAT  L
Sbjct: 857  IILPDYDDQRKEKLE-GEDVGEVVHCDFVKFKPGQIGPDELQLEIEKVICTDRESATASL 915

Query: 427  DRMMSSALNGTT----SQVNKELFPKGLQKPFPKNCLSLMTTTGAKGGLVNFTQISSLLG 260
            D  M + LN       SQ+ K L   GL KPFPKNC+S+MTTTGAKG  VNF QIS+ LG
Sbjct: 916  DMKMKNKLNSKLTREGSQILKHLLTAGLLKPFPKNCISVMTTTGAKGSTVNFQQISAYLG 975

Query: 259  QQELEGKRVPRMVSGKTLPCFHPWDPASRAGGFISDRFLTGLRPQEYYFHCMAGREGLVD 80
            QQELEGKRVPRMVSGKTLP F PWD  SRAGGFI+DRFLTGLRPQEYYFHCMAGREGLVD
Sbjct: 976  QQELEGKRVPRMVSGKTLPSFPPWDFTSRAGGFITDRFLTGLRPQEYYFHCMAGREGLVD 1035

Query: 79   TAVKTSRSGYLQRCLIKNLECLKVGY 2
            TAVKTSRSGYLQRCL+KNLE LKV Y
Sbjct: 1036 TAVKTSRSGYLQRCLVKNLESLKVCY 1061


>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1650

 Score =  729 bits (1883), Expect = 0.0
 Identities = 377/570 (66%), Positives = 438/570 (76%), Gaps = 19/570 (3%)
 Frame = -1

Query: 1654 LNLTYPERVTPWNVNKLKEAILTGGEEHPGATHYVDKYSSVKLPKAKQKRFAYARKLPTS 1475
            L LTYPERVTPWNV +L+ AIL G E HPGAT Y DK S++KLP  ++ R   +RKL +S
Sbjct: 449  LRLTYPERVTPWNVVELRNAILNGPETHPGATLYADKTSTLKLPLDRRSRSLTSRKLQSS 508

Query: 1474 RGVLTQTGRSVEQELEGKVVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 1295
            RGV+   G+  + E EGKVVYRHL+DGD+VLVNRQPTLHKPSIMAHVVRVLKGEKT+RMH
Sbjct: 509  RGVIMHNGKIHDNEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTVRMH 568

Query: 1294 YANCSVYNADFDGDEMNVHFPQDEISRAEGYHIVNANNQYLVPTSGEPKRGLIQDHIISA 1115
            YANCS YNADFDGDE+NVHFPQDEISRAE Y+IVNANNQY+ PTSG+P R LIQDHI+SA
Sbjct: 569  YANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIVSA 628

Query: 1114 VLLTKKDTFFTRDEYNYLLYSSGVSAAVRNSSSGASRKKIYMINSEDELEGAPPAIWKPE 935
             LLTKKDTF + +E+N LLYSSGVS        G   +KI+M NS+ E+   PPAI+KPE
Sbjct: 629  ALLTKKDTFLSCEEFNQLLYSSGVSMTGMGPFPGKPGQKIFMSNSDSEMFLFPPAIFKPE 688

Query: 934  PLWTGKQVISSILHHITRTRGLAPFTIEKSGKVPSEYF-----------------GNSSG 806
            PLWTGKQVIS++L++I  T+G  PFT+EK+ K+PS +F                  +   
Sbjct: 689  PLWTGKQVISALLYYI--TKGSPPFTVEKNAKIPSSFFKTRMREGKKRTKDTSIKKDEPD 746

Query: 805  EFMLRIQKNELVHGVIDKNQFEKHGLVHTVQELYGSNVAGILLSVLSRLFTLYLQMHGFT 626
            E  L I +N+LV GV+DK QF  +G+VHTVQE YGSN AGILLS LSRLFT +LQMHGFT
Sbjct: 747  EDKLLIYRNDLVRGVVDKAQFGDYGIVHTVQEFYGSNTAGILLSALSRLFTNFLQMHGFT 806

Query: 625  CGVDDLLITPDVETKRTSILEKSEEIGKKVHCQFVGSADGD-IDPTTLQAETEKTIRNNA 449
            CGVDDLL+T   +++RT+ LE  EEIG  VH +F+G  +GD IDP T+Q   EK IR+N 
Sbjct: 807  CGVDDLLLTEGKDSERTNQLESCEEIGDIVHREFIGVMEGDNIDPITMQLNVEKKIRSNG 866

Query: 448  ESATTRLDRMMSSALNGTTSQ-VNKELFPKGLQKPFPKNCLSLMTTTGAKGGLVNFTQIS 272
            E+A T LDR M S LN  TS  V K L  +G+ KP  KN +SLMTT+GAKG +VNF QIS
Sbjct: 867  EAAITYLDRKMISNLNSRTSTGVLKVLLSEGILKPSGKNWISLMTTSGAKGSMVNFQQIS 926

Query: 271  SLLGQQELEGKRVPRMVSGKTLPCFHPWDPASRAGGFISDRFLTGLRPQEYYFHCMAGRE 92
            S LGQQELEGKRVPRMVSGKTLPCF  WD + RAGGFI DRFLT LRPQEYYFHCMAGRE
Sbjct: 927  SHLGQQELEGKRVPRMVSGKTLPCFTSWDCSPRAGGFIIDRFLTALRPQEYYFHCMAGRE 986

Query: 91   GLVDTAVKTSRSGYLQRCLIKNLECLKVGY 2
            GLVDTAVKTSRSGYLQRCL+KNLECLKV Y
Sbjct: 987  GLVDTAVKTSRSGYLQRCLMKNLECLKVCY 1016


>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            lycopersicum]
          Length = 1677

 Score =  726 bits (1875), Expect = 0.0
 Identities = 364/564 (64%), Positives = 430/564 (76%), Gaps = 15/564 (2%)
 Frame = -1

Query: 1648 LTYPERVTPWNVNKLKEAILTGGEEHPGATHYVDKYSSVKLPKAKQKRFAYARKLPTSRG 1469
            LTYPER+TPWN  K+++A++ G E HPGA  + D+ ++VKLP  K+ R A +RKLP+SRG
Sbjct: 478  LTYPERLTPWNAVKMRDAVINGPENHPGAISFADRIATVKLPSNKKMRVAISRKLPSSRG 537

Query: 1468 VLTQTGRSVEQELEGKVVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYA 1289
             +TQ+GR+ E E EGKVVYRHL+DGD+VLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYA
Sbjct: 538  AVTQSGRNNEYEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYA 597

Query: 1288 NCSVYNADFDGDEMNVHFPQDEISRAEGYHIVNANNQYLVPTSGEPKRGLIQDHIISAVL 1109
            NCS YNADFDGDEMNVHFPQDEISRAE Y+IVNAN QY+VPT G+  RGLIQDHI+ AV+
Sbjct: 598  NCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVGAVI 657

Query: 1108 LTKKDTFFTRDEYNYLLYSSGVSAAVRNSSSGASRKKIYMINSEDELEGAPPAIWKPEPL 929
            LT K+TF +  E+N LLY SGV AA    +SG    K+ +++ E  ++   PA+WKP+PL
Sbjct: 658  LTMKNTFLSLHEFNQLLYGSGVFAAGPAPTSGNHSNKVSIVDFEGVVQTVLPAVWKPKPL 717

Query: 928  WTGKQVISSILHHITRTRGLAPFTIEKSGKVPSEYFGNSS---------------GEFML 794
            WTGKQVI+++L+H+  T G  P T++  GK+P  YF + S                E   
Sbjct: 718  WTGKQVITALLNHL--TNGCPPCTVKNKGKIPYAYFLSESRLVEYQSREEQEDRTAENEF 775

Query: 793  RIQKNELVHGVIDKNQFEKHGLVHTVQELYGSNVAGILLSVLSRLFTLYLQMHGFTCGVD 614
             I KNELV GVIDK QF K GLVHT+QELYGSN AGILLS LSRLFT++LQ+HGFTCG+D
Sbjct: 776  LIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNKAGILLSALSRLFTIFLQLHGFTCGID 835

Query: 613  DLLITPDVETKRTSILEKSEEIGKKVHCQFVGSADGDIDPTTLQAETEKTIRNNAESATT 434
            DL+I P  + +R   LE  +++G++ HC FV    G+I P  LQ E EK I +N E AT 
Sbjct: 836  DLVILPHYDIRRKEELE-GDDVGEEAHCDFVKFKRGEIGPLELQLEIEKAISSNKEVATA 894

Query: 433  RLDRMMSSALNGTTSQVNKELFPKGLQKPFPKNCLSLMTTTGAKGGLVNFTQISSLLGQQ 254
             LD  M + L    SQ NKEL  KGL KPFP+NC++LMT TGAKG  VNF QISS LGQQ
Sbjct: 895  ALDMKMKNKLANKGSQFNKELLLKGLLKPFPRNCIALMTITGAKGSTVNFQQISSYLGQQ 954

Query: 253  ELEGKRVPRMVSGKTLPCFHPWDPASRAGGFISDRFLTGLRPQEYYFHCMAGREGLVDTA 74
            ELEGKRVPRMVSGKTLPCF  WD ASRAGG++SDRFL+GLRPQEYYFHCMAGREGLVDTA
Sbjct: 955  ELEGKRVPRMVSGKTLPCFPAWDCASRAGGYVSDRFLSGLRPQEYYFHCMAGREGLVDTA 1014

Query: 73   VKTSRSGYLQRCLIKNLECLKVGY 2
            VKTSRSGYLQRCLIKNLE LKV Y
Sbjct: 1015 VKTSRSGYLQRCLIKNLESLKVCY 1038


>ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355509045|gb|AES90187.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1628

 Score =  716 bits (1849), Expect = 0.0
 Identities = 375/569 (65%), Positives = 432/569 (75%), Gaps = 18/569 (3%)
 Frame = -1

Query: 1654 LNLTYPERVTPWNVNKLKEAILTGGEEHPGATHYVDKYSSVKLPKAKQKRFAYARKLPTS 1475
            L LTYPERVTPWN  KL +AIL G + HPGA  Y DK S+++L K K  R + +R+L +S
Sbjct: 441  LRLTYPERVTPWNSAKLMDAILNGPDTHPGAILYTDKTSTLRLQKDKSLRSSTSRRLQSS 500

Query: 1474 RGVLTQTGRSVEQELEGKVVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 1295
            RGV+   G+  E E EGKVVYRHL+DGD+VLVNRQPTLHKPSIMAHVVRVLKGEKT+RMH
Sbjct: 501  RGVIMHHGKIHEHEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTVRMH 560

Query: 1294 YANCSVYNADFDGDEMNVHFPQDEISRAEGYHIVNANNQYLVPTSGEPKRGLIQDHIISA 1115
            YANCS YNADFDGDE+NVHFPQDEISRAE Y+IVNANNQY+ PTSG+P R LIQDHI+SA
Sbjct: 561  YANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIVSA 620

Query: 1114 VLLTKKDTFFTRDEYNYLLYSSGVSAAVRNSSSGASRKKIYMINSEDELEGAPPAIWKPE 935
             LLTKKDTF +  E+N LLYSSGVS     S S    +K+ M NSE E+   PPAI+KPE
Sbjct: 621  ALLTKKDTFLSCQEFNQLLYSSGVSMTGMGSFSCKPGQKVLMSNSESEMFLFPPAIFKPE 680

Query: 934  PLWTGKQVISSILHHITRTRGLAPFTIEKSGKVPSEYFGNSSGEF--------------- 800
            PLWTGKQVIS++L +I  T+G  PFT+EK+ K+PS +F   +GE                
Sbjct: 681  PLWTGKQVISALLCYI--TKGRPPFTVEKNAKIPSSFFKTQTGEIKKHTKDTSRKKDELE 738

Query: 799  -MLRIQKNELVHGVIDKNQFEKHGLVHTVQELYGSNVAGILLSVLSRLFTLYLQMHGFTC 623
              L I +N+LV GV+DK QF  +G+VHTVQE YGSN AGILLS LSRLFT +LQMHGFTC
Sbjct: 739  DKLLIYRNDLVRGVVDKAQFGDYGMVHTVQEFYGSNTAGILLSALSRLFTNFLQMHGFTC 798

Query: 622  GVDDLLITPDVETKRTSILEKSEEIGKKVHCQFVGSADGD-IDPTTLQAETEKTIRNNAE 446
            GVDDLLI    +++R + LE  EEIG  VH +F+G  + + IDP T+Q   EK IR+N E
Sbjct: 799  GVDDLLIKVGKDSERLNQLESCEEIGDIVHREFIGVMESENIDPITMQLNVEKKIRSNGE 858

Query: 445  SATTRLDRMMSSALNG-TTSQVNKELFPKGLQKPFPKNCLSLMTTTGAKGGLVNFTQISS 269
            +A T LDR M S LN  T+S V KEL  KG  KP  KN +SLMTT+GAKG +VNF QISS
Sbjct: 859  AAITYLDRKMISNLNSRTSSGVLKELLSKGSLKPSGKNWISLMTTSGAKGSMVNFQQISS 918

Query: 268  LLGQQELEGKRVPRMVSGKTLPCFHPWDPASRAGGFISDRFLTGLRPQEYYFHCMAGREG 89
             LGQQELEGKRVPRMVSGKTLPCF  WD + RAGGFI DRFLT LRPQEYYFHCMAGREG
Sbjct: 919  HLGQQELEGKRVPRMVSGKTLPCFPSWDCSPRAGGFIIDRFLTALRPQEYYFHCMAGREG 978

Query: 88   LVDTAVKTSRSGYLQRCLIKNLECLKVGY 2
            LVDTAVKTSRSGYLQRCL+KNLE LKV Y
Sbjct: 979  LVDTAVKTSRSGYLQRCLMKNLESLKVCY 1007


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
            sativus]
          Length = 1650

 Score =  716 bits (1847), Expect = 0.0
 Identities = 377/579 (65%), Positives = 443/579 (76%), Gaps = 28/579 (4%)
 Frame = -1

Query: 1654 LNLTYPERVTPWNVNKLKEAILTGGEEHPGATHYVDKYSSVKL--PKAKQKRFAYARKLP 1481
            L LTYPERVT WNV KL+ AI+ G E HPGATHY+DK ++VKL    +++ R + +RKLP
Sbjct: 446  LRLTYPERVTAWNVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSRKSRISISRKLP 505

Query: 1480 TSRGVLTQTGRSVEQELEGKVVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLR 1301
            +SRGV+   G   + E EGK+V RHL+DGDIVLVNRQPTLHKPSIMAHVVRVLKGEKT+R
Sbjct: 506  SSRGVVVDQGCD-DYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIR 564

Query: 1300 MHYANCSV-YNADFDGDEMNVHFPQDEISRAEGYHIVNANNQYLVPTSGEPKRGLIQDHI 1124
            MHYANCS+ YNADFDGDEMNVHFPQDEISRAE Y+IVNANNQY+ PTSGEP R LIQDHI
Sbjct: 565  MHYANCSITYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQDHI 624

Query: 1123 ISAVLLTKKDTFFTRDEYNYLLYSSGVSAAVRNSSSGASRKKIYMINSEDELEGAPPAIW 944
            ISAVLLTKKDTF   DE++ LLYSSG+S +   +SS    +KI+ ++ + E+    PA+W
Sbjct: 625  ISAVLLTKKDTFLNFDEFSQLLYSSGISTSKACASSEKPGQKIFTLDFDAEMLPVLPAVW 684

Query: 943  KPEPLWTGKQVISSILHHITRTRGLAPFTIEKSGKVPSEYF-----GNSSG--------- 806
            KPEPLWTGKQV++++L HIT+  G  PF +EK  K+P  +F     GN+S          
Sbjct: 685  KPEPLWTGKQVVTALLDHITQ--GSPPFFVEKDVKIPRGFFKCRDMGNNSSKKKEHTKVD 742

Query: 805  --------EFMLRIQKNELVHGVIDKNQFEKHGLVHTVQELYGSNVAGILLSVLSRLFTL 650
                    +  L I KNELV GVIDK QF  +GLVHTVQELYGSN AG+LLSV+SRLFT+
Sbjct: 743  KLKAARLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGLLLSVMSRLFTV 802

Query: 649  YLQMHGFTCGVDDLLITPDVETKRTSILEKSEEIGKKVHCQFVGSADGD-IDPTTLQAET 473
            +LQ HGFTCGVDDLL+   ++ +R   L+  E+IG++VH  F+   DG+ +DP TLQ   
Sbjct: 803  FLQTHGFTCGVDDLLLIECMDKEREKQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQLNI 862

Query: 472  EKTIRNNAESATTRLDRMMSSALNGTT--SQVNKELFPKGLQKPFPKNCLSLMTTTGAKG 299
            EKTI  N E+A T LDR M+S LN  T  S+V K+L  +GL KP  KNC+SLMTT+GAKG
Sbjct: 863  EKTISYNGEAALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSGAKG 922

Query: 298  GLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFHPWDPASRAGGFISDRFLTGLRPQEY 119
            G  NF QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD ASRAGGFI DRFLTGLRPQEY
Sbjct: 923  GTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLTGLRPQEY 982

Query: 118  YFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVGY 2
            YFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LK+ Y
Sbjct: 983  YFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKICY 1021


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA1-like [Cucumis sativus]
          Length = 1652

 Score =  714 bits (1842), Expect = 0.0
 Identities = 376/576 (65%), Positives = 441/576 (76%), Gaps = 25/576 (4%)
 Frame = -1

Query: 1654 LNLTYPERVTPWNVNKLKEAILTGGEEHPGATHYVDKYSSVKL--PKAKQKRFAYARKLP 1481
            L LTYPERVT WNV KL+ AI+ G E HPGATHY+DK ++VKL    +++ R + +RKLP
Sbjct: 452  LRLTYPERVTAWNVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSRKSRISISRKLP 511

Query: 1480 TSRGVLTQTGRSVEQELEGKVVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLR 1301
            +SRGV+   G   + E EGK+V RHL+DGDIVLVNRQPTLHKPSIMAHVVRVLKGEKT+R
Sbjct: 512  SSRGVVVDQGCD-DYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIR 570

Query: 1300 MHYANCSV-YNADFDGDEMNVHFPQDEISRAEGYHIVNANNQYLVPTSGEPKRGLIQDHI 1124
            MHYANCS+ YNADFDGDEMNVHFPQDEISRAE Y+IVNANNQY+ PTSGEP R LIQDHI
Sbjct: 571  MHYANCSITYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQDHI 630

Query: 1123 ISAVLLTKKDTFFTRDEYNYLLYSSGVSAAVRNSSSGASRKKIYMINSEDELEGAPPAIW 944
            ISAVLLTKKDTF   DE++ LLYSSG+S +   +SS    +KI+ ++ + E+    PA+W
Sbjct: 631  ISAVLLTKKDTFLNFDEFSQLLYSSGISTSKACASSEKPGQKIFTLDFDAEMLPVLPAVW 690

Query: 943  KPEPLWTGKQVISSILHHITRTRGLAPFTIEKSGKVPSEYF----GNSS----------- 809
            KPEPLWTGKQV++++L HIT+  G  PF +EK  K+P  +     GNS            
Sbjct: 691  KPEPLWTGKQVVTALLDHITQ--GSPPFFVEKDVKIPRGFLILDEGNSKKKEHTKVDKLK 748

Query: 808  ----GEFMLRIQKNELVHGVIDKNQFEKHGLVHTVQELYGSNVAGILLSVLSRLFTLYLQ 641
                 +  L I KNELV GVIDK QF  +GLVHTVQELYGSN AG+LLSV+SRLFT++LQ
Sbjct: 749  AARLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGLLLSVMSRLFTVFLQ 808

Query: 640  MHGFTCGVDDLLITPDVETKRTSILEKSEEIGKKVHCQFVGSADGD-IDPTTLQAETEKT 464
             HGFTCGVDDLL+   ++ +R   L+  E+IG++VH  F+   DG+ +DP TLQ   EKT
Sbjct: 809  THGFTCGVDDLLLIECMDKEREKQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQLNIEKT 868

Query: 463  IRNNAESATTRLDRMMSSALNGTT--SQVNKELFPKGLQKPFPKNCLSLMTTTGAKGGLV 290
            I  N E+A T LDR M+S LN  T  S+V K+L  +GL KP  KNC+SLMTT+GAKGG  
Sbjct: 869  ISYNGEAALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSGAKGGTA 928

Query: 289  NFTQISSLLGQQELEGKRVPRMVSGKTLPCFHPWDPASRAGGFISDRFLTGLRPQEYYFH 110
            NF QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD ASRAGGFI DRFLTGLRPQEYYFH
Sbjct: 929  NFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLTGLRPQEYYFH 988

Query: 109  CMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVGY 2
            CMAGREGLVDTAVKTSRSGYLQRCLIKNLE LK+ Y
Sbjct: 989  CMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKICY 1024


>gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlisea aurea]
          Length = 1626

 Score =  704 bits (1816), Expect = 0.0
 Identities = 367/565 (64%), Positives = 426/565 (75%), Gaps = 14/565 (2%)
 Frame = -1

Query: 1654 LNLTYPERVTPWNVNKLKEAILTGGEEHPGATHYVDKYSSVKLPKAKQKRFAYARKLPTS 1475
            L LTYPERVTPWN  KL+ A++ G + HPGAT Y+D  +++KLP  K+ R A +RKLP+S
Sbjct: 439  LRLTYPERVTPWNATKLRNAVVNGPDIHPGATTYIDSVATMKLPLNKKARVALSRKLPSS 498

Query: 1474 RGVLTQTGRSVEQELEGKVVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 1295
            RG   + G S + + EGKVVYRHL+DGDIVLVNRQPTLHKPSIMAHVVRVLKGE+TLRMH
Sbjct: 499  RGATAEVGES-QLDFEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGERTLRMH 557

Query: 1294 YANCSVYNADFDGDEMNVHFPQDEISRAEGYHIVNANNQYLVPTSGEPKRGLIQDHIISA 1115
            YANCS YNADFDGDE+NVHFPQDEISRAE Y+IVNAN QY+VPT G+  RGLIQDHI++A
Sbjct: 558  YANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTRGDTVRGLIQDHIVAA 617

Query: 1114 VLLTKKDTFFTRDEYNYLLYSSGVSAAVRNSSSGASRKKIYMINSEDELEGAPPAIWKPE 935
            VLLT K TF T  E+N LLY SGV A  R+S    S +K+     +  +    PAIWKPE
Sbjct: 618  VLLTLKRTFLTCSEFNQLLYGSGVFALGRHSYVSNSSQKVSGHAPDGLINPILPAIWKPE 677

Query: 934  PLWTGKQVISSILHHITRTRGLAPFTIEKSGKVPSEYFGNS----------SGEFMLRIQ 785
            PLWTGKQVIS++L+HI  TRG AP  ++   K+PS YF ++          + E    + 
Sbjct: 678  PLWTGKQVISALLNHI--TRGFAPCIVKNQTKLPSTYFTDNPAMEDEDEDQNAENNFLVW 735

Query: 784  KNELVHGVIDKNQFEKHGLVHTVQELYGSNVAGILLSVLSRLFTLYLQMHGFTCGVDDLL 605
            KNELV GVIDK QF K GLVHTVQELYGS  AG LL+  SRLFT++LQ+HGFTCGVDDL+
Sbjct: 736  KNELVRGVIDKAQFGKFGLVHTVQELYGSESAGNLLTAFSRLFTMFLQIHGFTCGVDDLM 795

Query: 604  ITPDVETKRTSILEKSEEIGKKVHCQFVGSADGDIDPTTLQAETEKTIRNNAESATTRLD 425
            I PD + KR   LE+ E++G++VHC F+    G I    LQ E EK I  + ESAT  LD
Sbjct: 796  ILPDYDVKRKEKLEQ-EDVGEEVHCDFINFKPGQIGREELQLEIEKAICRDRESATALLD 854

Query: 424  RMMSSALNG--TT--SQVNKELFPKGLQKPFPKNCLSLMTTTGAKGGLVNFTQISSLLGQ 257
              M + L    TT  SQV K L   GL KPFP+NC+S+MTTTGAKG  VNF QIS+ LGQ
Sbjct: 855  MKMKNKLTMKLTTEGSQVLKHLLTDGLLKPFPQNCISVMTTTGAKGSTVNFQQISAYLGQ 914

Query: 256  QELEGKRVPRMVSGKTLPCFHPWDPASRAGGFISDRFLTGLRPQEYYFHCMAGREGLVDT 77
            QELEGKRVPRMVSGKTLP F PWD ASRAGGFI+DRFL+GLRPQEYYFHCMAGREGLVDT
Sbjct: 915  QELEGKRVPRMVSGKTLPSFPPWDFASRAGGFITDRFLSGLRPQEYYFHCMAGREGLVDT 974

Query: 76   AVKTSRSGYLQRCLIKNLECLKVGY 2
            AVKTSRSGYLQRCL+KNLE LKVGY
Sbjct: 975  AVKTSRSGYLQRCLVKNLESLKVGY 999


>ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prunus persica]
            gi|462398594|gb|EMJ04262.1| hypothetical protein
            PRUPE_ppa000153mg [Prunus persica]
          Length = 1612

 Score =  703 bits (1814), Expect = 0.0
 Identities = 364/587 (62%), Positives = 427/587 (72%), Gaps = 38/587 (6%)
 Frame = -1

Query: 1648 LTYPERVTPWNVNKLKEAILTGGEEHPGATHYVDKYSSVKLPKAKQKRFAYARKLPTSRG 1469
            LTYPERVTPWNV+KL+ AI+ G E HPGAT YVDK     L + +++R + +RKLP+S+G
Sbjct: 381  LTYPERVTPWNVDKLRNAIVNGSEIHPGATQYVDKSGPKILRQNRRERISISRKLPSSKG 440

Query: 1468 VLTQTGRSVEQELEGKVVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYA 1289
             + Q G+  + ++E K+V+RHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKT+RMHYA
Sbjct: 441  AVMQHGKGSDNDIESKIVHRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYA 500

Query: 1288 NCSVYNADFDGDEMNVHFPQDEISRAEGYHIVNANNQYLVPTSGEPKRGLIQDHIISAVL 1109
            NCS YNADFDGDEMNVHFPQDEISR+E Y+IVNANNQY+ PTSG+P R LIQDH+ISAVL
Sbjct: 501  NCSTYNADFDGDEMNVHFPQDEISRSEAYNIVNANNQYVKPTSGDPIRALIQDHVISAVL 560

Query: 1108 LTKKDTFFTRDEYNYLLYSSGVSAAVRNSSSGASRKKIYMINSEDELEGAPPAIWKPEPL 929
            LTKKDTF   D++N LLYSS VSA V ++ SG   KK++M NSE  ++   PAIWKPEPL
Sbjct: 561  LTKKDTFLRWDQFNQLLYSSCVSARVSDAFSGKPDKKVFMFNSEGTMQPLLPAIWKPEPL 620

Query: 928  WTGKQVISSILHHITRTRGLAPFTIEKSGKVPSEYF-----------GNSS--------- 809
            WTGKQVI+++L+HI  TRG  P T+E+  K+P  +F           GN           
Sbjct: 621  WTGKQVITALLNHI--TRGSPPVTVERDAKIPRGFFNCKNVEGEDKSGNDGQQKKRKPSK 678

Query: 808  ---------------GEFMLRIQKNELVHGVIDKNQFEKHGLVHTVQELYGSNVAGILLS 674
                            E  L I +N LV GVIDK QF  +GLVHTVQE YGS+ AG LLS
Sbjct: 679  EQATDKDSSKEKEEPDENHLLIYRNNLVRGVIDKAQFGDYGLVHTVQEFYGSDTAGKLLS 738

Query: 673  VLSRLFTLYLQMHGFTCGVDDLLITPDVETKRTSILEKSEEIGKKVHCQFVGSAD-GDID 497
            VLS LFT+YLQMHGFTCG+DDLL+    + K    LE  E++G+ V+  F+   D    D
Sbjct: 739  VLSHLFTVYLQMHGFTCGIDDLLLLESKDAKMKDQLESCEDVGENVYRDFIEVKDVKRKD 798

Query: 496  PTTLQAETEKTIRNNAESATTRLDRMMSSALNGTT--SQVNKELFPKGLQKPFPKNCLSL 323
            P  LQ   E  IR+N ESA   LDR M S LN  T  S V K+L  +GL KP  KNC+ L
Sbjct: 799  PVELQLNIENFIRSNGESALASLDRRMISQLNNKTSNSDVFKQLLLRGLSKPSVKNCIYL 858

Query: 322  MTTTGAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFHPWDPASRAGGFISDRFL 143
            MTT+GAKG + N  QI+S LGQQELEGKRVP+M+SGKTLPCF PWD +SRAGGFI DRFL
Sbjct: 859  MTTSGAKGSVANLQQITSYLGQQELEGKRVPQMISGKTLPCFPPWDWSSRAGGFIIDRFL 918

Query: 142  TGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVGY 2
            TGL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRC+IKNLECLKV Y
Sbjct: 919  TGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCIIKNLECLKVSY 965


>ref|XP_003559192.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like
            [Brachypodium distachyon]
          Length = 1868

 Score =  693 bits (1789), Expect = 0.0
 Identities = 351/561 (62%), Positives = 421/561 (75%), Gaps = 10/561 (1%)
 Frame = -1

Query: 1654 LNLTYPERVTPWNVNKLKEAILTGGEEHPGATHYVDKYSSVKLPKAKQKRFAYARKLPTS 1475
            L +TYPE V P N  KL+EAI  G   HPGATHY    +  KL   + KR A A+ LP S
Sbjct: 676  LKMTYPENVMPCNAKKLQEAINNGCGIHPGATHYKVNKNMYKLQDDRSKRRAIAKMLPAS 735

Query: 1474 RGVLTQTGRSVEQELEGKVVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 1295
            RG ++Q G+  + E E KVVYRHL+DGDIVLVNRQPTLHKPS+MAH VRVL GEKT+RMH
Sbjct: 736  RGSISQPGKDPKCEFESKVVYRHLQDGDIVLVNRQPTLHKPSMMAHFVRVLPGEKTIRMH 795

Query: 1294 YANCSVYNADFDGDEMNVHFPQDEISRAEGYHIVNANNQYLVPTSGEPKRGLIQDHIISA 1115
            YANCS YNADFDGDEMNVHFPQDEISRAE  +IV+AN QY+ P SG+  RGLIQDHI+SA
Sbjct: 796  YANCSTYNADFDGDEMNVHFPQDEISRAEAMNIVDANKQYIGPRSGDAVRGLIQDHIVSA 855

Query: 1114 VLLTKKDTFFTRDEYNYLLYSSGVSAAVRNSSSGASRKKIYMINSEDELEGAPPAIWKPE 935
            VLLTK DTF +R+EY+ L+Y S VS+      SG   K++ ++   D LE  PPAI KP+
Sbjct: 856  VLLTKLDTFISREEYSQLVYGSCVSSTRSPCQSG---KRVSVMKDGDILELLPPAILKPK 912

Query: 934  PLWTGKQVISSILHHITRTRGLAPFTIEKSGKVPSEYF----------GNSSGEFMLRIQ 785
            PLWTGKQVI++IL+H+T+  G  PFT+EK GK+P +Y                E +L I 
Sbjct: 913  PLWTGKQVITTILNHLTK--GHPPFTVEKKGKIPVKYLIPKERHGDKDNAKDSEQVLYIH 970

Query: 784  KNELVHGVIDKNQFEKHGLVHTVQELYGSNVAGILLSVLSRLFTLYLQMHGFTCGVDDLL 605
             NEL+ G+IDK+QF  +G+VHTV ELYG+  AG LLS+ SRLFTL+LQ+HGFTCG+DDLL
Sbjct: 971  DNELIKGMIDKDQFGNYGIVHTVYELYGAETAGRLLSIFSRLFTLFLQLHGFTCGIDDLL 1030

Query: 604  ITPDVETKRTSILEKSEEIGKKVHCQFVGSADGDIDPTTLQAETEKTIRNNAESATTRLD 425
            +  + + +RT  L  SE+  ++VH +F  + D D DP  LQ E EK +R   ESAT  LD
Sbjct: 1031 LFQESDKQRTETLMTSEKCSEEVHRKFTCAGDYDEDPLKLQMEVEKVVRRIGESATDTLD 1090

Query: 424  RMMSSALNGTTSQVNKELFPKGLQKPFPKNCLSLMTTTGAKGGLVNFTQISSLLGQQELE 245
            +MM SALNG  S+VN+ LFP GLQKPFP+NCL+LMT TGAKGG VN TQI+SLLG Q+LE
Sbjct: 1091 KMMLSALNGLQSEVNRRLFPYGLQKPFPRNCLTLMTATGAKGGEVNMTQITSLLGSQDLE 1150

Query: 244  GKRVPRMVSGKTLPCFHPWDPASRAGGFISDRFLTGLRPQEYYFHCMAGREGLVDTAVKT 65
            G RVPRM+SGK+LPCF PWD +SRAGGF+SDRFLTGLRPQEYYFHCMAGR GL+DTAVKT
Sbjct: 1151 GARVPRMISGKSLPCFPPWDTSSRAGGFVSDRFLTGLRPQEYYFHCMAGRNGLIDTAVKT 1210

Query: 64   SRSGYLQRCLIKNLECLKVGY 2
            SRSGYLQRCL+K+LE L V Y
Sbjct: 1211 SRSGYLQRCLVKSLESLFVAY 1231


>ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arabidopsis lyrata subsp.
            lyrata] gi|297322267|gb|EFH52688.1| hypothetical protein
            ARALYDRAFT_486216 [Arabidopsis lyrata subsp. lyrata]
          Length = 1678

 Score =  689 bits (1778), Expect = 0.0
 Identities = 355/577 (61%), Positives = 431/577 (74%), Gaps = 26/577 (4%)
 Frame = -1

Query: 1654 LNLTYPERVTPWNVNKLKEAILTGGEEHPGATHYVDKYSSVKLPKAKQKRFAYARKLPTS 1475
            L LTYPERVTPWNV KL+EAI+ G + HPGATHY DK S+VKLP  ++ R A ARKL +S
Sbjct: 475  LKLTYPERVTPWNVEKLREAIINGPDIHPGATHYSDKLSTVKLPSTEKARRAIARKLLSS 534

Query: 1474 RGVLTQTGRSVEQELEGKVVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 1295
            RG  T+ G++ +   EGK V+RH+RDGD+VLVNRQPTLHKPS+MAH+VRVL+GEKTLR+H
Sbjct: 535  RGATTELGKTCDINFEGKTVHRHMRDGDVVLVNRQPTLHKPSLMAHIVRVLRGEKTLRLH 594

Query: 1294 YANCSVYNADFDGDEMNVHFPQDEISRAEGYHIVNANNQYLVPTSGEPKRGLIQDHIISA 1115
            YANCS YNADFDGDEMNVHFPQDEISRAE Y+IVNANNQY  P++G+P R LIQDHI+S+
Sbjct: 595  YANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYARPSNGDPLRALIQDHIVSS 654

Query: 1114 VLLTKKDTFFTRDEYNYLLYSSGVSAAVRNSSSGASRKKIYMINSEDELEGAPPAIWKPE 935
            VLLTK+DTF  +D +N LL+SSGV+  V +S SG S KK+ +  S+ EL    PAI KP 
Sbjct: 655  VLLTKRDTFLDKDHFNQLLFSSGVTDMVLSSFSGRSGKKVMVSASDAELLTVTPAILKPV 714

Query: 934  PLWTGKQVISSILHHITRTRGLAPFTIEKSGKVPSEYFGNSS------------------ 809
            PLWTGKQVI+++L+ I  T+G  PFT+EK+ K+P ++F   S                  
Sbjct: 715  PLWTGKQVITAVLNQI--TKGHPPFTVEKATKLPVDFFKCRSREVKPNSGDLTKKKKIDE 772

Query: 808  ------GEFMLRIQKNELVHGVIDKNQFEKHGLVHTVQELYGSNVAGILLSVLSRLFTLY 647
                   E  L I+KNE V GVIDK QF  +GLVHTV ELYGSN AG LLSV SRLFT++
Sbjct: 773  SWKQNLNEDKLLIRKNEFVCGVIDKAQFADYGLVHTVHELYGSNAAGNLLSVFSRLFTVF 832

Query: 646  LQMHGFTCGVDDLLITPDVETKRTSILEKSEEIGKKVHCQFVG-SADGDIDPTTLQAETE 470
            LQ+HGFTCGVDDL+I  D++ +RT  L++ E +G++V  +  G   D  IDP  +++  E
Sbjct: 833  LQIHGFTCGVDDLIILKDMDEERTKQLQECENVGERVLRKTFGIDVDVQIDPQDMRSRIE 892

Query: 469  KTIRNNAESATTRLDRMMSSALNGTTSQ-VNKELFPKGLQKPFPKNCLSLMTTTGAKGGL 293
            + +  + ESA   LDR + + LN  +S+ V  +L   GL K    NC+SLMT +GAKG  
Sbjct: 893  RILYEDGESALASLDRSIVNDLNQCSSKGVMNDLLSDGLLKTPGMNCISLMTISGAKGSK 952

Query: 292  VNFTQISSLLGQQELEGKRVPRMVSGKTLPCFHPWDPASRAGGFISDRFLTGLRPQEYYF 113
            VNF QISS LGQQ+LEGKRVPRMVSGKTLPCFHPWD + RAGGFISDRFL+GLRPQEYYF
Sbjct: 953  VNFQQISSHLGQQDLEGKRVPRMVSGKTLPCFHPWDWSPRAGGFISDRFLSGLRPQEYYF 1012

Query: 112  HCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVGY 2
            HCMAGREGLVDTAVKTSRSGYLQRCL+KNLE LK+ Y
Sbjct: 1013 HCMAGREGLVDTAVKTSRSGYLQRCLMKNLESLKINY 1049


>ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana]
            gi|4678281|emb|CAB41189.1| DNA-directed RNA polymerase I
            190K chain-like protein [Arabidopsis thaliana]
            gi|332646163|gb|AEE79684.1| nuclear RNA polymerase A1
            [Arabidopsis thaliana]
          Length = 1670

 Score =  689 bits (1777), Expect = 0.0
 Identities = 357/577 (61%), Positives = 430/577 (74%), Gaps = 26/577 (4%)
 Frame = -1

Query: 1654 LNLTYPERVTPWNVNKLKEAILTGGEEHPGATHYVDKYSSVKLPKAKQKRFAYARKLPTS 1475
            L LTYPERVTPWNV KL+EAI+ G + HPGATHY DK S++KLP  ++ R A ARKL +S
Sbjct: 473  LKLTYPERVTPWNVEKLREAIINGPDIHPGATHYSDKSSTMKLPSTEKARRAIARKLLSS 532

Query: 1474 RGVLTQTGRSVEQELEGKVVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 1295
            RG  T+ G++ +   EGK V+RH+RDGDIVLVNRQPTLHKPS+MAH VRVLKGEKTLR+H
Sbjct: 533  RGATTELGKTCDINFEGKTVHRHMRDGDIVLVNRQPTLHKPSLMAHKVRVLKGEKTLRLH 592

Query: 1294 YANCSVYNADFDGDEMNVHFPQDEISRAEGYHIVNANNQYLVPTSGEPKRGLIQDHIISA 1115
            YANCS YNADFDGDEMNVHFPQDEISRAE Y+IVNANNQY  P++GEP R LIQDHI+S+
Sbjct: 593  YANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYARPSNGEPLRALIQDHIVSS 652

Query: 1114 VLLTKKDTFFTRDEYNYLLYSSGVSAAVRNSSSGASRKKIYMINSEDELEGAPPAIWKPE 935
            VLLTK+DTF  +D +N LL+SSGV+  V ++ SG S KK+ +  S+ EL    PAI KP 
Sbjct: 653  VLLTKRDTFLDKDHFNQLLFSSGVTDMVLSTFSGRSGKKVMVSASDAELLTVTPAILKPV 712

Query: 934  PLWTGKQVISSILHHITRTRGLAPFTIEKSGKVPSEYFGNSS------------------ 809
            PLWTGKQVI+++L+ I  T+G  PFT+EK+ K+P ++F   S                  
Sbjct: 713  PLWTGKQVITAVLNQI--TKGHPPFTVEKATKLPVDFFKCRSREVKPNSGDLTKKKEIDE 770

Query: 808  ------GEFMLRIQKNELVHGVIDKNQFEKHGLVHTVQELYGSNVAGILLSVLSRLFTLY 647
                   E  L I+KNE V GVIDK QF  +GLVHTV ELYGSN AG LLSV SRLFT++
Sbjct: 771  SWKQNLNEDKLHIRKNEFVCGVIDKAQFADYGLVHTVHELYGSNAAGNLLSVFSRLFTVF 830

Query: 646  LQMHGFTCGVDDLLITPDVETKRTSILEKSEEIGKKVHCQFVG-SADGDIDPTTLQAETE 470
            LQ HGFTCGVDDL+I  D++ +RT  L++ E +G++V  +  G   D  IDP  +++  E
Sbjct: 831  LQTHGFTCGVDDLIILKDMDEERTKQLQECENVGERVLRKTFGIDVDVQIDPQDMRSRIE 890

Query: 469  KTIRNNAESATTRLDRMMSSALNGTTSQ-VNKELFPKGLQKPFPKNCLSLMTTTGAKGGL 293
            + +  + ESA   LDR + + LN  +S+ V  +L   GL K   +NC+SLMT +GAKG  
Sbjct: 891  RILYEDGESALASLDRSIVNYLNQCSSKGVMNDLLSDGLLKTPGRNCISLMTISGAKGSK 950

Query: 292  VNFTQISSLLGQQELEGKRVPRMVSGKTLPCFHPWDPASRAGGFISDRFLTGLRPQEYYF 113
            VNF QISS LGQQ+LEGKRVPRMVSGKTLPCFHPWD + RAGGFISDRFL+GLRPQEYYF
Sbjct: 951  VNFQQISSHLGQQDLEGKRVPRMVSGKTLPCFHPWDWSPRAGGFISDRFLSGLRPQEYYF 1010

Query: 112  HCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVGY 2
            HCMAGREGLVDTAVKTSRSGYLQRCL+KNLE LKV Y
Sbjct: 1011 HCMAGREGLVDTAVKTSRSGYLQRCLMKNLESLKVNY 1047