BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00028651
         (2183 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003587231.1| ribosomal protein S3 [Citrullus lanatus] gi|...   635   e-179
dbj|BAD83474.2| ribosomal protein S3 (mitochondrion) [Nicotiana ...   627   e-177
ref|YP_003587365.1| ribosomal protein S3 [Cucurbita pepo] gi|259...   627   e-177
ref|YP_005090476.1| ribosomal protein S3 (mitochondrion) [Lotus ...   626   e-176
ref|YP_002608370.1| ribosomal protein S3 [Vitis vinifera] gi|209...   621   e-175
ref|YP_008802511.1| ribosomal protein S3 (mitochondrion) [Asclep...   615   e-173
ref|YP_005090455.1| ribosomal protein S3 (mitochondrion) [Millet...   614   e-173
emb|CBJ23369.1| ribosomal protein S3 [Beta vulgaris subsp. marit...   612   e-172
ref|YP_007516919.1| ribosomal protein S3 (mitochondrion) [Glycin...   609   e-171
ref|YP_173410.1| ribosomal protein S3 [Nicotiana tabacum]             608   e-171
sp|P27754.2|RT03_OENBE RecName: Full=Ribosomal protein S3, mitoc...   607   e-171
ref|YP_004237268.1| ribosomal protein S3 (mitochondrion) [Ricinu...   607   e-171
ref|YP_004222806.1| ribosomal protein S3 [Vigna radiata] gi|3082...   604   e-170
ref|YP_004222316.1| ribosomal protein S3 [Beta vulgaris subsp. m...   604   e-170
dbj|BAD66747.1| ribosomal protein S3 [Beta vulgaris subsp. vulga...   603   e-170
ref|NP_064078.2| rps3 gene product (mitochondrion) [Beta vulgari...   603   e-169
ref|YP_006666137.1| ribosomal protein S3 (mitochondrion) [Malus ...   603   e-169
sp|Q04716.1|RT03_PETHY RecName: Full=Ribosomal protein S3, mitoc...   602   e-169
gb|AGC78893.1| ribosomal protein S3 (mitochondrion) [Vicia faba]      600   e-169
ref|YP_005090420.1| rps3 gene product (mitochondrion) [Boea hygr...   600   e-169

>ref|YP_003587231.1| ribosomal protein S3 [Citrullus lanatus] gi|259156790|gb|ACV96652.1|
            ribosomal protein S3 [Citrullus lanatus]
          Length = 563

 Score =  635 bits (1639), Expect = e-179
 Identities = 358/555 (64%), Positives = 422/555 (76%), Gaps = 48/555 (8%)
 Frame = -3

Query: 2049 MGRKGNPIAVRLDVNRKSDSSWFSDYYYGKLVYQDVNLRSYLGSIRPPTKKTFGFRLGKC 1870
            M RKGNPI+VRLD+NR SDSSWFSDYYYGKL+YQDVNLRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFSDYYYGKLLYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 1869 VIQHFPKVTVVHNFLPHRPKTLDRKSTSK-----GQWWAFGKVKSIE--HS--DTEE--N 1723
            +I HFPK T +H FLP RP+ L R+  SK     G+WWAFGKV  I   HS  DTEE  N
Sbjct: 61   IILHFPKRTFIHFFLPRRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLHSSDDTEEERN 120

Query: 1722 EVR--DAGKRVKSVAATNQ----------KKKLANGYHDQSNPLRE-----LRISGALG- 1597
            EVR  +A KRV+S+   ++          KKK   GYHD+S  +++     LR+SGA   
Sbjct: 121  EVRGREAEKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKLLRVSGAFKH 180

Query: 1596 PK-AG--NDIAFL--RDDSFKKTECFKFFFPDKSSSCG---NLLQR-VPAVRPSLSYLVM 1444
            PK AG  NDIAFL   DDSF+KT+ FKFFFP KS S G   +LL+R +PAVRPSL+YLVM
Sbjct: 181  PKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLLKRTLPAVRPSLNYLVM 240

Query: 1443 HDLLNAKKRMHFDPVIALNHFVTRGAAEPSTIEGS--EGGRLDQRIRSRIAFLVEN--SS 1276
              LLN K +MHFDPV+ LNHFV  G AEPST+ G+  +G  LD+RIRSRIAF VE+  S 
Sbjct: 241  QYLLNTKNKMHFDPVVVLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESLTSE 300

Query: 1275 SKSLSEGK--LTHFIRQANDLRYVGTRKNSISLXXXXXXXXXFLRDGV--YKKHLIEDSR 1108
             K L+E K  LTHFIRQANDLR+ GT K +ISL         F RDGV  YK    ED+R
Sbjct: 301  KKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGMYKNLFFEDTR 360

Query: 1107 EQFLGQLRTKCWNLLGKE--VKLIDKVVEQGEVGELLKGVEMMTEIILRNRRIPYGYNSY 934
            EQ LGQLR KCWNL+GK+  ++LI+K ++ G +GEL+KG+EMM EIILRNRRIPYGYNSY
Sbjct: 361  EQLLGQLRIKCWNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNSY 420

Query: 933  LNELEKMRSFVSDRTGAHTLIESVKIKSVYQSASLIAQDIAFQMMNRKRTFRSIFGQIVK 754
            LNE++KMRS +S+RT  +TLIESVKIKSVYQSASLIAQDI+FQ+ N+ R+FRSIF +IVK
Sbjct: 421  LNEVKKMRSLLSNRTKTNTLIESVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVK 480

Query: 753  EIPLVMPKGVDGIRVCVSGRLRGAEIARSECGKYGKTSCNVFNQKIDYALSEVSTRYGIL 574
            +IPLVM KGV+GIR+C SGRL GAEIAR+ECGKYGKTS NVFNQKIDYA +EVSTRYGI 
Sbjct: 481  DIPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGIS 540

Query: 573  GVKVWISYSQRK*ER 529
            GVKVWISY ++K ER
Sbjct: 541  GVKVWISYKKKKKER 555


>dbj|BAD83474.2| ribosomal protein S3 (mitochondrion) [Nicotiana tabacum]
          Length = 563

 Score =  627 bits (1617), Expect = e-177
 Identities = 348/552 (63%), Positives = 416/552 (75%), Gaps = 48/552 (8%)
 Frame = -3

Query: 2049 MGRKGNPIAVRLDVNRKSDSSWFSDYYYGKLVYQDVNLRSYLGSIRPPTKKTFGFRLGKC 1870
            M RKGNPI+VRLD+NR SDSSWFSDYYYGKLVYQDVNLRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFSDYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 1869 VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKVKSI------EHSDTEEN 1723
            +I HFPK T +H FLP RP+ L R+  S     KG+W AFGKV  I      + ++ E N
Sbjct: 61   IIIHFPKRTFIHFFLPRRPRRLKRREKSRPVKEKGRWGAFGKVGPIGCLHSSDGTEEERN 120

Query: 1722 EVRD--AGKRVKSVAATNQ----------KKKLANGYHDQSNPLRE-----LRISGALG- 1597
            EVR   AGKRV+S+   ++          KKK   GYHD+S  +++     LR+SGA   
Sbjct: 121  EVRGRGAGKRVESIRLDDREKQNEIRIWPKKKQGYGYHDRSPSIKKNLSKLLRVSGAFKH 180

Query: 1596 PK-AG--NDIAFL--RDDSFKKTECFKFFFPDKSSS---CGNLLQR-VPAVRPSLSYLVM 1444
            PK AG  NDIAFL   DDSF+KT  FKFFFP KS S     +LL+R +PAVRPSL+YLVM
Sbjct: 181  PKYAGIENDIAFLIENDDSFRKTNLFKFFFPKKSRSDRPTSHLLKRTLPAVRPSLNYLVM 240

Query: 1443 HDLLNAKKRMHFDPVIALNHFVTRGAAEPSTIEGS--EGGRLDQRIRSRIAFLVENSSS- 1273
              LLN K ++HFDPV+ LNHFV  G AEPST+ G+  +G  LD+RIRS IAF VE+S+S 
Sbjct: 241  QYLLNTKNKIHFDPVVVLNHFVAPGVAEPSTMGGANAQGRSLDKRIRSCIAFFVESSTSE 300

Query: 1272 -KSLSEGK--LTHFIRQANDLRYVGTRKNSISLXXXXXXXXXFLRDGV--YKKHLIEDSR 1108
             K L+E K  +THFIRQANDLR+ GT K +ISL         FLRDGV  Y     ED+R
Sbjct: 301  KKCLAEAKKRVTHFIRQANDLRFAGTTKTTISLFPFFGATFFFLRDGVGVYNNLFFEDAR 360

Query: 1107 EQFLGQLRTKCWNLLGKE--VKLIDKVVEQGEVGELLKGVEMMTEIILRNRRIPYGYNSY 934
            EQ LGQLR KCWNL+GK+  ++LI+K ++   +GEL++G+EMM EIILRNRRIPYGYN Y
Sbjct: 361  EQLLGQLRIKCWNLMGKDKVMELIEKFIDLNRIGELIRGIEMMIEIILRNRRIPYGYNYY 420

Query: 933  LNELEKMRSFVSDRTGAHTLIESVKIKSVYQSASLIAQDIAFQMMNRKRTFRSIFGQIVK 754
            LNE++KMRS + +RT  +TLIESVKIKSVYQSASLIAQDI+FQ+ N+ R+FRSIF +IVK
Sbjct: 421  LNEVKKMRSLLYNRTNTNTLIESVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVK 480

Query: 753  EIPLVMPKGVDGIRVCVSGRLRGAEIARSECGKYGKTSCNVFNQKIDYALSEVSTRYGIL 574
            +IPLVM KGV+GIR+C SGRL GAEIAR+ECGKYGKTSCNVFNQKIDYA +EVSTRYGIL
Sbjct: 481  DIPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSCNVFNQKIDYASAEVSTRYGIL 540

Query: 573  GVKVWISYSQRK 538
            GVKVWISYS++K
Sbjct: 541  GVKVWISYSKKK 552


>ref|YP_003587365.1| ribosomal protein S3 [Cucurbita pepo] gi|259156834|gb|ACV96695.1|
            ribosomal protein S3 [Cucurbita pepo]
          Length = 565

 Score =  627 bits (1616), Expect = e-177
 Identities = 356/557 (63%), Positives = 421/557 (75%), Gaps = 50/557 (8%)
 Frame = -3

Query: 2049 MGRKGNPIAVRLDVNRKSDSSWFSDYYYGKLVYQDVNLRSYLGSIRPPTKKTFGFRLGKC 1870
            M RKGNPI+VRLD+NR SDSSWFSDYYYGKL+YQDVNLRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFSDYYYGKLLYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 1869 VIQHFPKVTVVHNFLPHRPKTLDRKSTSK-----GQWWAFGKVKSIE--HS--DTEE--N 1723
            +I HFPK+T +H FLP RP+ L R++ SK     G+WWAFGKV  I   HS  DTEE  N
Sbjct: 61   IILHFPKITFIHFFLPRRPRGLKRRAKSKPGKDQGRWWAFGKVGPIGCLHSSDDTEEERN 120

Query: 1722 EVR--DAGKRVKSVAATNQ-----------KKKLANGYHDQS-----NPLRELRISGALG 1597
            +VR  +A KRV+S+   +            KKK   GYHD+S     N  + LR+SGA  
Sbjct: 121  KVRGREAEKRVESMIRLDDREKQNEIRIWPKKKQDYGYHDRSPSRKKNLSKLLRVSGAFK 180

Query: 1596 -PK-AG--NDIAFL--RDDSFKKTECFKFFFPDKSSSCG---NLLQR-VPAVRPSLSYLV 1447
             PK AG  NDIAFL   DDSF+KT+ FKFFFP++S S G   +LL+R +PAVRPSL+YLV
Sbjct: 181  HPKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQSRSDGPTSHLLKRTLPAVRPSLNYLV 240

Query: 1446 MHDLLNAKKRMHFDPVIALNHFVTRGAAEPSTIEGS--EGGRLDQRIRSRIAFLVEN--S 1279
            M  LLN K +MHFDPV  LNHFV  G AEPST+ G+  +G  LD+RIRSRIAF VE+  S
Sbjct: 241  MQYLLNTKNKMHFDPVGVLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESLTS 300

Query: 1278 SSKSLSEGK--LTHFIRQANDLRYVGTRKNSISLXXXXXXXXXFLRDGV--YKKHLIEDS 1111
              K L+E K  LTHFIRQANDLR+ GT K +ISL         F RDGV  YK    ED+
Sbjct: 301  EKKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGMYKNLFFEDT 360

Query: 1110 REQFLGQLRTKCWNLLGKE---VKLIDKVVEQGEVGELLKGVEMMTEIILRNRRIPYGYN 940
            REQ LGQLR KCWNL+GKE   ++LI+K ++ G +GEL+KG+EMM EIILRNRRIPYGYN
Sbjct: 361  REQLLGQLRIKCWNLMGKEDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYN 420

Query: 939  SYLNELEKMRSFVSDRTGAHTLIESVKIKSVYQSASLIAQDIAFQMMNRKRTFRSIFGQI 760
            SYLNE++KMRS +S+RT  +TLIESVKI+SVYQSASLIAQDI+FQ+ N+ R+FRSIF +I
Sbjct: 421  SYLNEVQKMRSLLSNRTKTNTLIESVKIQSVYQSASLIAQDISFQLRNKTRSFRSIFTKI 480

Query: 759  VKEIPLVMPKGVDGIRVCVSGRLRGAEIARSECGKYGKTSCNVFNQKIDYALSEVSTRYG 580
            VK+IP  M KGV+GIR+C SGRL GAEIAR+ECGKYGKTS NVFNQKIDYA +EVSTRYG
Sbjct: 481  VKDIPFGMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYG 540

Query: 579  ILGVKVWISYSQRK*ER 529
            ILGVKVWISY ++K ER
Sbjct: 541  ILGVKVWISYKKQKKER 557


>ref|YP_005090476.1| ribosomal protein S3 (mitochondrion) [Lotus japonicus]
            gi|357197340|gb|AET62936.1| ribosomal protein S3
            (mitochondrion) [Lotus japonicus]
          Length = 563

 Score =  626 bits (1615), Expect = e-176
 Identities = 345/552 (62%), Positives = 414/552 (75%), Gaps = 48/552 (8%)
 Frame = -3

Query: 2049 MGRKGNPIAVRLDVNRKSDSSWFSDYYYGKLVYQDVNLRSYLGSIRPPTKKTFGFRLGKC 1870
            M RKGNPI+VRLD+NR SDSSWFSDYYY KLVYQDVNLRSY GSIRPP + TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFSDYYYCKLVYQDVNLRSYFGSIRPPARLTFGFRLGRC 60

Query: 1869 VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKVKSI------EHSDTEEN 1723
            ++ +FPK T +H FLP RP+ L R+  S     KG+WWAFGKV  I      ++++ E N
Sbjct: 61   ILINFPKRTFIHFFLPRRPRRLKRREKSRPGKEKGRWWAFGKVGPIGCLHSSDNTEEERN 120

Query: 1722 EVRD--AGKRVKSVAATNQ----------KKKLANGYHDQSNPLRE-----LRISGALG- 1597
            EVR   AGKRV+S+   ++          KKK   GYHD+S  +++     LR+ GA   
Sbjct: 121  EVRGRRAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKLLRVGGAFKH 180

Query: 1596 PK---AGNDIAFL--RDDSFKKTECFKFFFPDKSSSCG---NLLQR-VPAVRPSLSYLVM 1444
            PK   A NDIAFL   DDSF+KT+ FKFFFP KS S G   +L +R +PAVRPSL+YLVM
Sbjct: 181  PKYAGAVNDIAFLIENDDSFRKTKFFKFFFPKKSRSNGPTSHLFKRTLPAVRPSLNYLVM 240

Query: 1443 HDLLNAKKRMHFDPVIALNHFVTRGAAEPSTIEGS--EGGRLDQRIRSRIAFLVENSSS- 1273
              LLN K ++HFDPV+ LNHFV  G AEPST+ G+  +G  LD RIRSRIAF VE+S+S 
Sbjct: 241  QYLLNRKNQIHFDPVVVLNHFVAPGVAEPSTMRGANAQGRSLDNRIRSRIAFFVESSTSE 300

Query: 1272 -KSLSEGK--LTHFIRQANDLRYVGTRKNSISLXXXXXXXXXFLRD--GVYKKHLIEDSR 1108
             K L+E K  LTHFIR ANDLR+ GT K +ISL         FLRD  G+Y     ED+R
Sbjct: 301  KKCLAEAKKRLTHFIRLANDLRFAGTTKTTISLFPFFGATFFFLRDRVGIYNHLFFEDAR 360

Query: 1107 EQFLGQLRTKCWNLLGKE--VKLIDKVVEQGEVGELLKGVEMMTEIILRNRRIPYGYNSY 934
            E  LGQLR KCWNL+GK+  ++LI+K ++ G +GE +KG+EMM EIILRNRRIPYGYNSY
Sbjct: 361  EPLLGQLRIKCWNLMGKDKVMELIEKFIDLGRIGEWIKGIEMMIEIILRNRRIPYGYNSY 420

Query: 933  LNELEKMRSFVSDRTGAHTLIESVKIKSVYQSASLIAQDIAFQMMNRKRTFRSIFGQIVK 754
            LNE++KMRS +S+RT  +TLIESVKIKSVYQSASLIAQDI+FQ+  + R+FRSIF +IVK
Sbjct: 421  LNEVKKMRSLLSNRTNTNTLIESVKIKSVYQSASLIAQDISFQLRKKTRSFRSIFSRIVK 480

Query: 753  EIPLVMPKGVDGIRVCVSGRLRGAEIARSECGKYGKTSCNVFNQKIDYALSEVSTRYGIL 574
            +IPLVM KGV+GIR+C SGRL GAEIAR+ECGKYGKTSCNVFNQKIDYA +EVSTRYGIL
Sbjct: 481  DIPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSCNVFNQKIDYASAEVSTRYGIL 540

Query: 573  GVKVWISYSQRK 538
            GVKVWISYSQ+K
Sbjct: 541  GVKVWISYSQKK 552


>ref|YP_002608370.1| ribosomal protein S3 [Vitis vinifera] gi|209954167|emb|CAQ77614.1|
            ribosomal protein S3 [Vitis vinifera]
            gi|239764764|gb|ACS15233.1| ribosomal protein S3 [Vitis
            vinifera]
          Length = 563

 Score =  621 bits (1602), Expect = e-175
 Identities = 347/552 (62%), Positives = 412/552 (74%), Gaps = 48/552 (8%)
 Frame = -3

Query: 2049 MGRKGNPIAVRLDVNRKSDSSWFSDYYYGKLVYQDVNLRSYLGSIRPPTKKTFGFRLGKC 1870
            M RKGNPI+VRLD+NR SDSSWFSDYYYGK VYQDVNLRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFSDYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 1869 VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKVKSI------EHSDTEEN 1723
            +I HFPK T +H FLP RP+ L R+  S     KG+WWAFGKV  I      + ++ E N
Sbjct: 61   IILHFPKRTFIHFFLPRRPRGLKRREKSRPGKEKGRWWAFGKVGPIGCLHSSDGTEEERN 120

Query: 1722 EVRD--AGKRVKSVAATNQ----------KKKLANGYHDQSNPLRE-----LRISGALG- 1597
            EVR   AGKRV+S+   ++          KKK   GYHDQS  +++     LR+SGA   
Sbjct: 121  EVRGRGAGKRVESIRLDDREKQNERRIWPKKKQRYGYHDQSPSIKKNLSKLLRVSGAFKH 180

Query: 1596 -PKAG--NDIAFL--RDDSFKKTECFKFFFPDKSSSCG---NLLQR-VPAVRPSLSYLVM 1444
               AG  NDIAFL   DDSF+KT+ FKFFFP KS S G   ++L+R +PAVRPSL+Y VM
Sbjct: 181  LKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHILKRTLPAVRPSLNYSVM 240

Query: 1443 HDLLNAKKRMHFDPVIALNHFVTRGAAEPSTIEGS--EGGRLDQRIRSRIAFLVENSSS- 1273
              LLN K ++HFD V+ LNHFV  G AEPST+ G+  +G  LD+RIRSRIAF VE+S+S 
Sbjct: 241  QYLLNTKNQIHFDSVVVLNHFVAPGVAEPSTMGGANAQGRSLDKRIRSRIAFFVESSTSE 300

Query: 1272 -KSLSEGK--LTHFIRQANDLRYVGTRKNSISLXXXXXXXXXFLRDGV--YKKHLIEDSR 1108
             K L+E K  LTHFIRQANDLR+ GT K +ISL         F RDGV  Y     ED+R
Sbjct: 301  KKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGVYNNLFFEDAR 360

Query: 1107 EQFLGQLRTKCWNLLGKE--VKLIDKVVEQGEVGELLKGVEMMTEIILRNRRIPYGYNSY 934
            EQ LGQLR KCWNL+GK+  ++LIDK ++ G +GEL+KG+EMM EIILRNRRIPYGYNSY
Sbjct: 361  EQLLGQLRIKCWNLMGKDKVMELIDKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNSY 420

Query: 933  LNELEKMRSFVSDRTGAHTLIESVKIKSVYQSASLIAQDIAFQMMNRKRTFRSIFGQIVK 754
            LNE++KMRS +S+RT  +TLIESVKIKSVYQSAS IAQDI+FQ  N+ R+FRSIF +IVK
Sbjct: 421  LNEVKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVK 480

Query: 753  EIPLVMPKGVDGIRVCVSGRLRGAEIARSECGKYGKTSCNVFNQKIDYALSEVSTRYGIL 574
            +IPLVM KGV+GIR+C SGR  GAEIAR+ECGKYGKTS NVFNQKIDYA +EVSTRYGI 
Sbjct: 481  DIPLVMKKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGIS 540

Query: 573  GVKVWISYSQRK 538
            GVKVWISYS++K
Sbjct: 541  GVKVWISYSKKK 552


>ref|YP_008802511.1| ribosomal protein S3 (mitochondrion) [Asclepias syriaca]
            gi|556562349|gb|AGZ63045.1| ribosomal protein S3
            (mitochondrion) [Asclepias syriaca]
          Length = 555

 Score =  615 bits (1587), Expect = e-173
 Identities = 342/546 (62%), Positives = 408/546 (74%), Gaps = 42/546 (7%)
 Frame = -3

Query: 2049 MGRKGNPIAVRLDVNRKSDSSWFSDYYYGKLVYQDVNLRSYLGSIRPPTKKTFGFRLGKC 1870
            M RKGNPI+VRLD+NR SDSSWFSDYYYGKLVYQDVNLRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFSDYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 1869 VIQHFPKVTVVHNFLPHRPKTLDRKSTS---KGQWWAFGKVKSI------EHSDTEENEV 1717
            +I HFPK T +H FLP RP+ L R+  S   K +WWAFGKV  I      + ++ E  EV
Sbjct: 61   IILHFPKRTFIHFFLPRRPRRLKRRDKSRPRKARWWAFGKVGPIGCLHSKDGTEEERKEV 120

Query: 1716 --RDAGKRVKSVAATNQ--------KKKLANGYHDQSNPLRE-----LRISGAL-GPK-A 1588
              R AGKRV S+   ++        KKK    YHD+S  +++     LR+SGA   PK A
Sbjct: 121  RGRGAGKRVDSIRLDDRENERRIWPKKKQGYAYHDRSPSIKKNISKLLRVSGAFKHPKYA 180

Query: 1587 G--NDIAFL--RDDSFKKTECFKFFFPDKSSSCG---NLLQR-VPAVRPSLSYLVMHDLL 1432
            G  NDIAFL   DDSF+KT+ FKFFFP KS   G   +LL++ +PAVRPS +YLVM  LL
Sbjct: 181  GVVNDIAFLIENDDSFRKTKLFKFFFPKKSRFNGPTSHLLKKTLPAVRPSFNYLVMQYLL 240

Query: 1431 NAKKRMHFDPVIALNHFVTRGAAEPSTI--EGSEGGRLDQRIRSRIAFLVEN--SSSKSL 1264
            N K ++HFDPV+ LNHFV  G AEPST+    ++   LD+RIRSRIAF VE+  S  KSL
Sbjct: 241  NTKNKIHFDPVVVLNHFVAPGVAEPSTMGRANAQERSLDKRIRSRIAFFVESLTSEKKSL 300

Query: 1263 SEGKLTHFIRQANDLRYVGTRKNSISLXXXXXXXXXFLRD--GVYKKHLIEDSREQFLGQ 1090
            +E KLTHFIRQANDLR+ GT K + SL         FLRD  GVY     ED+REQ LG+
Sbjct: 301  AEAKLTHFIRQANDLRFAGTTKTTTSLFPFFGATFFFLRDGVGVYNNLFFEDAREQLLGK 360

Query: 1089 LRTKCWNLLGKE--VKLIDKVVEQGEVGELLKGVEMMTEIILRNRRIPYGYNSYLNELEK 916
             R KCWNL+ K   ++LI+K ++ G +GEL+KG+EMM EIILR RRIPYGYNSYLNE++K
Sbjct: 361  SRIKCWNLMSKAKVMELIEKFIDLGRIGELIKGIEMMIEIILRKRRIPYGYNSYLNEVKK 420

Query: 915  MRSFVSDRTGAHTLIESVKIKSVYQSASLIAQDIAFQMMNRKRTFRSIFGQIVKEIPLVM 736
            MRS +S+RT  +TLIESVKIKSVYQSASLIAQDI+FQ+  RKR+FRSIF +IVK+IPLVM
Sbjct: 421  MRSLLSNRTNTNTLIESVKIKSVYQSASLIAQDISFQL--RKRSFRSIFSKIVKDIPLVM 478

Query: 735  PKGVDGIRVCVSGRLRGAEIARSECGKYGKTSCNVFNQKIDYALSEVSTRYGILGVKVWI 556
             KGV+G+R+C SGRL GAEIAR+ECGKYGKTS NVFNQKIDYA +EVSTRYGILGVKVWI
Sbjct: 479  TKGVEGVRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGILGVKVWI 538

Query: 555  SYSQRK 538
            SYS++K
Sbjct: 539  SYSKKK 544


>ref|YP_005090455.1| ribosomal protein S3 (mitochondrion) [Millettia pinnata]
            gi|357197318|gb|AET62915.1| ribosomal protein S3
            (mitochondrion) [Millettia pinnata]
          Length = 565

 Score =  614 bits (1584), Expect = e-173
 Identities = 342/554 (61%), Positives = 415/554 (74%), Gaps = 50/554 (9%)
 Frame = -3

Query: 2049 MGRKGNPIAVRLDVNRKSDSSWFSDYYYGKLVYQDVNLRSYLGSIRPPTKKTFGFRLGKC 1870
            M RKGNPI+VRLD+NR SDSSWFSDYY+GKLVYQDVNLRSY GSIRPP + TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFSDYYFGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRC 60

Query: 1869 VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKVKSI------EHSDTEEN 1723
            ++ +FPK T +H FLP RP+ L R+  S     KG+WWAFGKV  I      ++++ E N
Sbjct: 61   ILINFPKRTFIHFFLPRRPRRLKRRKKSRPGKGKGRWWAFGKVGPIGCLHSSDNTEEERN 120

Query: 1722 EVRD--AGKRVKSVAATNQ----------KKKLANGYHDQSNPLRE-----LRISGALG- 1597
            EVR   AGKRV+S+   ++          KKK   GYHD+S  +++     LR+SGA   
Sbjct: 121  EVRGRRAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKLLRVSGAFKH 180

Query: 1596 PK-AG--NDIAFL--RDDSFKKTECFKFFFPDKSSSCG---NLLQR-VPAVRPSLSYLVM 1444
            PK AG  NDIAFL   DDSF+K + FK F P KS S G   +L +R +PAVRPSL+YLVM
Sbjct: 181  PKYAGVVNDIAFLIENDDSFRKLKFFKLFLPKKSRSDGPTSHLFKRTLPAVRPSLNYLVM 240

Query: 1443 HDLLNAKKRMHFDPVIALNHFVTRGAAEPSTIEGS--EGGRLDQRIRSRIAFLVENSSS- 1273
              LLN K +MHFDPV+ LNHFV  G AEPST+ G+  +G  LD+RIRSRIAF VE+S+S 
Sbjct: 241  QYLLNRKNKMHFDPVVVLNHFVAPGVAEPSTMGGANAQGRSLDKRIRSRIAFFVESSTSE 300

Query: 1272 -KSLSEGK--LTHFIRQANDLRYVGTRKNSISLXXXXXXXXXFLRD--GVYKKH--LIED 1114
             K L+E K  LTHFIR ANDLR+ GT K +ISL         FLRD  G+   H    ED
Sbjct: 301  KKCLAEAKKRLTHFIRLANDLRFAGTTKTTISLFPFFGATFFFLRDRVGISNNHNLFFED 360

Query: 1113 SREQFLGQLRTKCWNLLGKE--VKLIDKVVEQGEVGELLKGVEMMTEIILRNRRIPYGYN 940
            +RE  LG+LR KCWNL+GK+  ++LI+K ++ G +GE +KG+EMM EIILRNRRIPYGYN
Sbjct: 361  AREPLLGKLRIKCWNLMGKDKVMELIEKFIDLGRIGEWIKGIEMMIEIILRNRRIPYGYN 420

Query: 939  SYLNELEKMRSFVSDRTGAHTLIESVKIKSVYQSASLIAQDIAFQMMNRKRTFRSIFGQI 760
            SYLNE+ KMRS +S+RT  +TLIESVKI+SVYQSASLIAQDI+FQ+  + R+FRSIF +I
Sbjct: 421  SYLNEVIKMRSLLSNRTNTNTLIESVKIQSVYQSASLIAQDISFQLRKKTRSFRSIFSRI 480

Query: 759  VKEIPLVMPKGVDGIRVCVSGRLRGAEIARSECGKYGKTSCNVFNQKIDYALSEVSTRYG 580
            VK+IPLVM KGV+GIR+C SGRL+GAEIAR+ECGKYGKTSCNVFNQKIDYA +EVSTRYG
Sbjct: 481  VKDIPLVMKKGVEGIRICCSGRLKGAEIARTECGKYGKTSCNVFNQKIDYASAEVSTRYG 540

Query: 579  ILGVKVWISYSQRK 538
            ILGVKVWISYS++K
Sbjct: 541  ILGVKVWISYSKKK 554


>emb|CBJ23369.1| ribosomal protein S3 [Beta vulgaris subsp. maritima]
          Length = 551

 Score =  612 bits (1579), Expect = e-172
 Identities = 340/551 (61%), Positives = 408/551 (74%), Gaps = 48/551 (8%)
 Frame = -3

Query: 2049 MGRKGNPIAVRLDVNRKSDSSWFSDYYYGKLVYQDVNLRSYLGSIRPPTKKTFGFRLGKC 1870
            M RKGNPI+VRLD+NR SDSSWF+DYYYGKLVYQD+NLRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFNDYYYGKLVYQDINLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 1869 VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKVKSIE------HSDTEEN 1723
            +I HF K T ++ FLP RP+   R+  S     KG+WW  GKV  IE          E N
Sbjct: 61   IIIHFQKRTFINFFLPRRPQRRKRRKKSRPGKTKGRWWELGKVGPIECLYSSEGRKEERN 120

Query: 1722 EVRD--AGKRVKSVAATNQKK----------KLANGYHDQSNPLRE-----LRISGALG- 1597
            EVRD  AGKRV+S+   +QKK          K   GYHD+S  +++     LR+SGA   
Sbjct: 121  EVRDRRAGKRVESIRLDDQKKQNEIRVWPKKKQRYGYHDRSPSIKKNLSKLLRVSGAFKH 180

Query: 1596 PKAG---NDIAFL--RDDSFKKTECFKFFFPDKSSSCG---NLLQR-VPAVRPSLSYLVM 1444
            PK     NDIAFL   D SFKKT+ FKFFFP KS   G   +LL+R +PAVRPSL+YLVM
Sbjct: 181  PKYAEVVNDIAFLIENDSSFKKTKLFKFFFPKKSRYDGPTSHLLKRTLPAVRPSLNYLVM 240

Query: 1443 HDLLNAKKRMHFDPVIALNHFVTRGAAEPSTIE--GSEGGRLDQRIRSRIAFLVENSSS- 1273
              LLN KK+MHFDPV+ LNHFV  G  EPST+    ++GG LD+RIRSRIAF VE+S+S 
Sbjct: 241  QYLLNTKKKMHFDPVLVLNHFVAPGVVEPSTMNRANAQGGSLDKRIRSRIAFFVESSTSQ 300

Query: 1272 -KSLSEGK--LTHFIRQANDLRYVGTRKNSISLXXXXXXXXXFLRDGV--YKKHLIEDSR 1108
             K L+E K  LTHFIRQANDLR+ G RK +ISL         FLRDGV  Y     +D+R
Sbjct: 301  KKCLAEAKKRLTHFIRQANDLRFAGRRKTTISLFPFFGATFFFLRDGVRVYNNLFFKDAR 360

Query: 1107 EQFLGQLRTKCWNLLGKE--VKLIDKVVEQGEVGELLKGVEMMTEIILRNRRIPYGYNSY 934
            EQ LGQLR KCWNL+GK+  +KLI+K ++ G + EL+KG+EMM EIIL+NRRIPYG NSY
Sbjct: 361  EQLLGQLRRKCWNLMGKDKVMKLIEKFIDLGGIRELIKGIEMMIEIILKNRRIPYGSNSY 420

Query: 933  LNELEKMRSFVSDRTGAHTLIESVKIKSVYQSASLIAQDIAFQMMNRKRTFRSIFGQIVK 754
            LNE++KMRS +S+RT  +TLIESVKIKSVYQSASLIAQDI+FQ+  ++ +FRSIF +IVK
Sbjct: 421  LNEVKKMRSLLSNRTNTNTLIESVKIKSVYQSASLIAQDISFQLKKKRGSFRSIFSKIVK 480

Query: 753  EIPLVMPKGVDGIRVCVSGRLRGAEIARSECGKYGKTSCNVFNQKIDYALSEVSTRYGIL 574
            +IPLVM +GV+GIR+C SGRL GAEIAR+ECGKYGKTSCNV +QKIDYA +EVSTRYGI+
Sbjct: 481  KIPLVMKRGVEGIRICCSGRLEGAEIARTECGKYGKTSCNVLHQKIDYASAEVSTRYGIV 540

Query: 573  GVKVWISYSQR 541
            GVKVWISYS +
Sbjct: 541  GVKVWISYSPK 551


>ref|YP_007516919.1| ribosomal protein S3 (mitochondrion) [Glycine max]
            gi|403311576|gb|AFR34324.1| ribosomal protein S3
            (mitochondrion) [Glycine max]
          Length = 562

 Score =  609 bits (1571), Expect = e-171
 Identities = 344/551 (62%), Positives = 408/551 (74%), Gaps = 47/551 (8%)
 Frame = -3

Query: 2049 MGRKGNPIAVRLDVNRKSDSSWFSDYYYGKLVYQDVNLRSYLGSIRPPTKKTFGFRLGKC 1870
            M RKGNPI+VRLD+NR SDSS FSDYYYGKLVYQDVNLRSY GSIRPP + TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSRFSDYYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRC 60

Query: 1869 VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKVKSI------EHSDTEEN 1723
            ++ HFPK T +H FLP RP+ L R+  S     KG+WWAFGKV  I      ++++ E N
Sbjct: 61   ILIHFPKRTFIHFFLPRRPRRLKRRKKSRPGKEKGRWWAFGKVGPIGCLHSSDNTEEERN 120

Query: 1722 EVRD--AGKRVKSVAATNQ----------KKKLANGYHDQS-----NPLRELRISGALG- 1597
            EVR   AGKRV+S+   ++          KKK   GYHD+S     N  + LR+SGA   
Sbjct: 121  EVRGRRAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFKH 180

Query: 1596 PK-AG--NDIAFL--RDDSFKKTECFKFFFPDKSSSCG---NLLQR-VPAVRPSLSYLVM 1444
            PK AG  NDIAFL   DDSFKK + FK FFP KS S G   +L +R +PAVRPSL+Y VM
Sbjct: 181  PKYAGVVNDIAFLIENDDSFKKRKLFKLFFPKKSRSDGPTSHLFKRTLPAVRPSLNYSVM 240

Query: 1443 HDLLNAKKRMHFDPVIALNHFVTRGAAEPSTIEGSEGGR-LDQRIRSRIAFLVENSSS-- 1273
              LLN K +MHFDPV+ LNHFV  G AEPST+ G++ GR LD+RIRSRIAF VE+S+S  
Sbjct: 241  QYLLNRKNQMHFDPVVVLNHFVAPGVAEPSTMGGAKQGRGLDKRIRSRIAFFVESSTSEK 300

Query: 1272 KSLSEGK--LTHFIRQANDLRYVGTRKNSISLXXXXXXXXXFLRD--GVYKKHLIEDSRE 1105
            K L+E K  LTHFIR ANDLR+ GT K +ISL         F RD  G Y     ED+RE
Sbjct: 301  KCLAEAKKRLTHFIRLANDLRFAGTTKTTISLFPFFGATFFFPRDRVGFYNHLSFEDARE 360

Query: 1104 QFLGQLRTKCWNLLGKE--VKLIDKVVEQGEVGELLKGVEMMTEIILRNRRIPYGYNSYL 931
              LGQLR KCWNL+GK+  ++LIDK ++ G +GE +KG+EMM EIILRNRRIPYGYNSYL
Sbjct: 361  PLLGQLRIKCWNLMGKDKVMELIDKFIDLGRIGEWIKGIEMMIEIILRNRRIPYGYNSYL 420

Query: 930  NELEKMRSFVSDRTGAHTLIESVKIKSVYQSASLIAQDIAFQMMNRKRTFRSIFGQIVKE 751
            NE++KMRS +S+RT  +TLIESVKIKSVYQSAS IAQDI+FQ+  + R+FRSIF +IVK+
Sbjct: 421  NEVKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIFSRIVKD 480

Query: 750  IPLVMPKGVDGIRVCVSGRLRGAEIARSECGKYGKTSCNVFNQKIDYALSEVSTRYGILG 571
            IPLVM KGV+GIR+C SGR  GAEIAR+ECGKYGKTS NVFNQKIDYA +EVSTRYGI G
Sbjct: 481  IPLVMKKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGISG 540

Query: 570  VKVWISYSQRK 538
            VKVWISYS++K
Sbjct: 541  VKVWISYSKKK 551


>ref|YP_173410.1| ribosomal protein S3 [Nicotiana tabacum]
          Length = 563

 Score =  608 bits (1569), Expect = e-171
 Identities = 343/552 (62%), Positives = 408/552 (73%), Gaps = 48/552 (8%)
 Frame = -3

Query: 2049 MGRKGNPIAVRLDVNRKSDSSWFSDYYYGKLVYQDVNLRSYLGSIRPPTKKTFGFRLGKC 1870
            M RKGNPI+VRLD+NR SDSSWFSDYYYGK VYQDVNLRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFSDYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 1869 VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKVKSI------EHSDTEEN 1723
            +I HFPK T +H FLP RP+ L R+  S     KG+W AFGKV  I      + ++ E N
Sbjct: 61   IIIHFPKRTFIHFFLPRRPRRLKRREKSRPVKEKGRWGAFGKVGPIGCLHSSDGTEEERN 120

Query: 1722 EVRD--AGKRVKSVAATNQ----------KKKLANGYHDQS-----NPLRELRISGALG- 1597
            EVR   AGKRV+S+   ++          KKK   GYHD+S     N  + LR+SGA   
Sbjct: 121  EVRGRGAGKRVESIRLDDREKQNEIRIWPKKKQGYGYHDRSPSIKKNLSKSLRVSGAFKH 180

Query: 1596 PK-AG--NDIAFL--RDDSFKKTECFKFFFPDKSSS---CGNLLQR-VPAVRPSLSYLVM 1444
            PK AG  NDIAFL   DDSF+KT  FKFFFP KS S     +LL+R +PAVRPSL+Y VM
Sbjct: 181  PKYAGIENDIAFLIENDDSFRKTNLFKFFFPKKSRSDRPTSHLLKRTLPAVRPSLNYSVM 240

Query: 1443 HDLLNAKKRMHFDPVIALNHFVTRGAAEPSTIEGS--EGGRLDQRIRSRIAFLVENSSS- 1273
              LLN K ++HFDPV+ LNHFV  G AEPST+ G+  +G  LD+RIRS IAF VE+S+S 
Sbjct: 241  QYLLNTKNKIHFDPVVVLNHFVAPGVAEPSTMGGANAQGRSLDKRIRSCIAFFVESSTSE 300

Query: 1272 -KSLSEGK--LTHFIRQANDLRYVGTRKNSISLXXXXXXXXXFLRDGV--YKKHLIEDSR 1108
             K L+E K  +THFIRQANDLR+ GT K +ISL         F RDGV  Y     ED+R
Sbjct: 301  KKCLAEAKKRVTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGVYNNLFFEDAR 360

Query: 1107 EQFLGQLRTKCWNLLGKE--VKLIDKVVEQGEVGELLKGVEMMTEIILRNRRIPYGYNSY 934
            EQ LGQLR KCWNL+GK+  ++LI+K ++   +GEL++G+EMM EIILRNRRIPYGYN Y
Sbjct: 361  EQLLGQLRIKCWNLMGKDKVMELIEKFIDLNRIGELIRGIEMMIEIILRNRRIPYGYNYY 420

Query: 933  LNELEKMRSFVSDRTGAHTLIESVKIKSVYQSASLIAQDIAFQMMNRKRTFRSIFGQIVK 754
            LNE++KMRS + +RT  +TLIESVKIKSVYQSAS IAQDI+FQ  N+ R+FRSIF +IVK
Sbjct: 421  LNEVKKMRSLLYNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVK 480

Query: 753  EIPLVMPKGVDGIRVCVSGRLRGAEIARSECGKYGKTSCNVFNQKIDYALSEVSTRYGIL 574
            +IPLVM KGV+GIR+C SGRL GAEIAR+ECGKYGKTS NVFNQKIDYA +EVSTRYGI 
Sbjct: 481  DIPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGIS 540

Query: 573  GVKVWISYSQRK 538
            GVKVWISYS++K
Sbjct: 541  GVKVWISYSKKK 552


>sp|P27754.2|RT03_OENBE RecName: Full=Ribosomal protein S3, mitochondrial
            gi|632234|pir||S43767 ribosomal protein S3 - evening
            primrose mitochondrion gi|13191|emb|CAA48894.1| ribosomal
            protein S3 [Oenothera berteroana]
          Length = 550

 Score =  607 bits (1566), Expect = e-171
 Identities = 345/550 (62%), Positives = 407/550 (74%), Gaps = 48/550 (8%)
 Frame = -3

Query: 2049 MGRKGNPIAVRLDVNRKSDSSWFSDYYYGKLVYQDVNLRSYLGSIRPPTKKTFGFRLGKC 1870
            M RKGNPI+VRLD+NR SDSSWFSDYYYGK VYQDVNLRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFSDYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 1869 VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKVKSI----EHSDTEE--N 1723
            +I HFPK T +H FLP RP+ L R   S     K +WW FGKV  I     + DTEE  N
Sbjct: 61   IILHFPKRTFIHFFLPRRPRRLKRGKKSRPGKEKARWWEFGKVGPIGCLHSNDDTEEERN 120

Query: 1722 EV--RDAGKRVKSVAATNQ----------KKKLANGYHDQS-----NPLRELRISGALG- 1597
            EV  R AGKRV+S+   ++          KKK   GYHD+S     N  + LR+SGA   
Sbjct: 121  EVGGRGAGKRVESIRLDDREKQNEIRIWPKKKQGYGYHDRSPSIKKNLSKSLRVSGAFKH 180

Query: 1596 PK-AG--NDIAFL--RDDSFKKTECFKFFFPDKSSSCG---NLLQRVP-AVRPSLSYLVM 1444
            PK AG  NDIAFL   DDSF+KT+ FKFFFP KS S G   +LL+R P AVRPSL+Y VM
Sbjct: 181  PKYAGVLNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLLKRTPPAVRPSLNYSVM 240

Query: 1443 HDLLNAKKRMHFDPVIALNHFVTRGAAEPSTIEGS--EGGRLDQRIRSRIAFLVENSSS- 1273
               LN K +MHFDP++ LNHFV  G AEPST+ G+  +G   + RIRSRIAF VE+S+S 
Sbjct: 241  QYYLNTKNQMHFDPLVVLNHFVAPGVAEPSTMGGANRQGRSNELRIRSRIAFFVESSTSE 300

Query: 1272 -KSLSEGK--LTHFIRQANDLRYVGTRKNSISLXXXXXXXXXFLRDGV--YKKHLIEDSR 1108
             KSL+E K  L HFIRQ NDLR+ G  K +ISL         F RDGV  YK    ED+R
Sbjct: 301  KKSLAEDKKGLPHFIRQENDLRFAGRTKTTISLFPFFGATFFFPRDGVGVYKHLFFEDAR 360

Query: 1107 EQFLGQLRTKCWNLLGKE--VKLIDKVVEQGEVGELLKGVEMMTEIILRNRRIPYGYNSY 934
            EQ LGQLR KCW L+GK+  ++LI+K ++ G +GEL+KG+E+M EIILRNRRIPYGYNSY
Sbjct: 361  EQLLGQLRIKCWKLMGKDKVMELIEKFIDLGGIGELIKGIEIMIEIILRNRRIPYGYNSY 420

Query: 933  LNELEKMRSFVSDRTGAHTLIESVKIKSVYQSASLIAQDIAFQMMNRKRTFRSIFGQIVK 754
            LNE++KMRS +S+RT  +T+IESVKIKSVYQSAS IAQDI+FQ  N++R+FRSIF QIVK
Sbjct: 421  LNEVKKMRSLLSNRTKTNTIIESVKIKSVYQSASPIAQDISFQPRNKRRSFRSIFSQIVK 480

Query: 753  EIPLVMPKGVDGIRVCVSGRLRGAEIARSECGKYGKTSCNVFNQKIDYALSEVSTRYGIL 574
            +IPLVM KGV+GIR+C SGR +GAEIAR+ECGKYGKTS NVFNQKIDYA +EVSTRYGIL
Sbjct: 481  DIPLVMKKGVEGIRICCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGIL 540

Query: 573  GVKVWISYSQ 544
            GVKVWISYS+
Sbjct: 541  GVKVWISYSK 550


>ref|YP_004237268.1| ribosomal protein S3 (mitochondrion) [Ricinus communis]
            gi|322394275|gb|ADW96032.1| ribosomal protein S3
            (mitochondrion) [Ricinus communis]
          Length = 563

 Score =  607 bits (1564), Expect = e-171
 Identities = 342/552 (61%), Positives = 411/552 (74%), Gaps = 48/552 (8%)
 Frame = -3

Query: 2049 MGRKGNPIAVRLDVNRKSDSSWFSDYYYGKLVYQDVNLRSYLGSIRPPTKKTFGFRLGKC 1870
            M RKGNPI+VRLD+NR SDSS FSDYYYGK VYQDVNLRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSRFSDYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 1869 VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKVKSI------EHSDTEEN 1723
            +I HFPK T ++ FL  RP+ L R+  +     KG+WW FGKV  I      ++++ E N
Sbjct: 61   IILHFPKRTFINFFLSRRPRRLKRREKTRPGKEKGRWWTFGKVGPIRCLHSSDNTEEERN 120

Query: 1722 EVRD--AGKRVKSVAATNQ----------KKKLANGYHDQS-----NPLRELRISGALG- 1597
            EVR   AGKRV+S+   ++          KKK   GYHD+S     N  + LR+SGA   
Sbjct: 121  EVRGRGAGKRVESIRLDDREKENEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFKH 180

Query: 1596 PK-AG--NDIAFL--RDDSFKKTECFKFFFPDKSSSCG---NLLQR-VPAVRPSLSYLVM 1444
            PK AG  NDIAFL   DDSF+KT+ FKFFFP KS S G   +LL+R +PAV  SL+Y VM
Sbjct: 181  PKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLLKRTLPAVCLSLNYSVM 240

Query: 1443 HDLLNAKKRMHFDPVIALNHFVTRGAAEPSTIEGS--EGGRLDQRIRSRIAFLVENSSSK 1270
              LLN K ++HFDPV+ LNHFV  G AEPST+ G+  +G  LD+RIRSRIAF VE+S+S+
Sbjct: 241  QYLLNTKNQIHFDPVVVLNHFVAPGVAEPSTMGGANAQGRSLDKRIRSRIAFFVESSTSE 300

Query: 1269 S--LSEGK--LTHFIRQANDLRYVGTRKNSISLXXXXXXXXXFLRDGV--YKKHLIEDSR 1108
               LSE K  LTHFIRQANDLR+ GT K +ISL         F RDGV  Y     ED+R
Sbjct: 301  KNCLSEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGVYNNLFFEDAR 360

Query: 1107 EQFLGQLRTKCWNLLGKE--VKLIDKVVEQGEVGELLKGVEMMTEIILRNRRIPYGYNSY 934
            EQ LGQLR KCWNL+GK+  ++LI+K +  G +GEL+KG+EMM EIILRNRRIPYGYNSY
Sbjct: 361  EQLLGQLRIKCWNLMGKDKVMELIEKFINLGGIGELIKGIEMMIEIILRNRRIPYGYNSY 420

Query: 933  LNELEKMRSFVSDRTGAHTLIESVKIKSVYQSASLIAQDIAFQMMNRKRTFRSIFGQIVK 754
            LNE++KMRS +S+RT  +TLIES+K+KSVYQSAS IAQDI+FQ+ N+ R+FRSIF +IVK
Sbjct: 421  LNEMKKMRSLLSNRTNTNTLIESIKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVK 480

Query: 753  EIPLVMPKGVDGIRVCVSGRLRGAEIARSECGKYGKTSCNVFNQKIDYALSEVSTRYGIL 574
            +IPLVM KGV+GIR+C SGRL GAEIAR+ECGKYGKTS NVFNQKIDYA +EVSTRYGI 
Sbjct: 481  DIPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGIS 540

Query: 573  GVKVWISYSQRK 538
            GVKVWISYS++K
Sbjct: 541  GVKVWISYSKKK 552


>ref|YP_004222806.1| ribosomal protein S3 [Vigna radiata] gi|308206736|gb|ADO19873.1|
            ribosomal protein S3 [Vigna radiata]
          Length = 563

 Score =  604 bits (1558), Expect = e-170
 Identities = 342/551 (62%), Positives = 409/551 (74%), Gaps = 47/551 (8%)
 Frame = -3

Query: 2049 MGRKGNPIAVRLDVNRKSDSSWFSDYYYGKLVYQDVNLRSYLGSIRPPTKKTFGFRLGKC 1870
            M RKGNPI+VRLD+NR SDSS FSDYYYGKLVYQDVNLRSY GSIRPP + TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSRFSDYYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRC 60

Query: 1869 VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKVKSI------EHSDTEEN 1723
            ++ HFPK T +H FLP RP+ L R+  S     KG+WWAFGKV  I      ++++ E N
Sbjct: 61   ILIHFPKRTFIHFFLPRRPRRLKRRKKSRPGKEKGRWWAFGKVGPIGCLHSSDNTEEERN 120

Query: 1722 EVRD--AGKRVKSVAATNQ----------KKKLANGYHDQS-----NPLRELRISGALG- 1597
            EVR   AGKRV+S+   ++          KKK   GYHD+S     N  + LR+SGA   
Sbjct: 121  EVRGRRAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFKH 180

Query: 1596 PK-AG--NDIAFL--RDDSFKKTECFKFFFPDKSSSCG---NLLQR-VPAVRPSLSYLVM 1444
            PK AG  NDIAFL   DDSF+K + F+FFFP KS S G   +L +R +PAVRPSL+Y VM
Sbjct: 181  PKYAGVVNDIAFLIENDDSFRKRKFFQFFFPKKSRSDGPTSHLFKRTLPAVRPSLNYSVM 240

Query: 1443 HDLLNAKKRMHFDPVIALNHFVTRGAAEPSTIEGSEGGR-LDQRIRSRIAFLVENSSS-- 1273
              LLN K +MHFDPV+ LNHFV  G AEPST+ G++ GR LD+RIRSRIAF VE+S+S  
Sbjct: 241  QYLLNRKNQMHFDPVVVLNHFVAPGVAEPSTMGGAKQGRGLDKRIRSRIAFFVESSTSEK 300

Query: 1272 KSLSEGK--LTHFIRQANDLRYVGTRKNSISLXXXXXXXXXFLRD--GVYKKHLIEDSRE 1105
            K L+E K  LTHFIR ANDLR+ GT K +ISL         F RD  G YK    ED+RE
Sbjct: 301  KCLAEAKKRLTHFIRLANDLRFAGTTKTTISLFPFFGATFFFPRDRVGFYKNLSFEDARE 360

Query: 1104 QFLGQLRTKCWNLLGKE--VKLIDKVVEQGEVGELLKGVEMMTEIILRNRRIPYGYNSYL 931
              LGQLR KC NL+GK+  ++LI+K ++ G +GE +KG+EMM EIILRNRRIPYGYNSYL
Sbjct: 361  PLLGQLRIKCCNLMGKDKVMELIEKFIDLGRIGEWIKGIEMMIEIILRNRRIPYGYNSYL 420

Query: 930  NELEKMRSFVSDRTGAHTLIESVKIKSVYQSASLIAQDIAFQMMNRKRTFRSIFGQIVKE 751
            NE++KMRS +S+RT  +TLIESVKIKSVYQSAS IAQDI+FQ+  + R+FRSIF +IVK+
Sbjct: 421  NEVKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIFSRIVKD 480

Query: 750  IPLVMPKGVDGIRVCVSGRLRGAEIARSECGKYGKTSCNVFNQKIDYALSEVSTRYGILG 571
            IPLVM KGV+GIR+C SGR  GAEIAR+ECGKYGKTS NVFNQKIDYA +EVSTRYGI G
Sbjct: 481  IPLVMKKGVEGIRICCSGRSEGAEIARTECGKYGKTSHNVFNQKIDYASAEVSTRYGISG 540

Query: 570  VKVWISYSQRK 538
            VKVWISYS++K
Sbjct: 541  VKVWISYSKKK 551


>ref|YP_004222316.1| ribosomal protein S3 [Beta vulgaris subsp. maritima]
            gi|346683190|ref|YP_004842122.1| ribosomal protein S3
            [Beta macrocarpa] gi|317905652|emb|CBJ14050.1| ribosomal
            protein S3 [Beta vulgaris subsp. maritima]
            gi|319439831|emb|CBJ17541.1| ribosomal protein S3 [Beta
            vulgaris subsp. maritima] gi|345500108|emb|CBX24926.1|
            ribosomal protein S3 [Beta macrocarpa]
          Length = 551

 Score =  604 bits (1557), Expect = e-170
 Identities = 337/551 (61%), Positives = 405/551 (73%), Gaps = 48/551 (8%)
 Frame = -3

Query: 2049 MGRKGNPIAVRLDVNRKSDSSWFSDYYYGKLVYQDVNLRSYLGSIRPPTKKTFGFRLGKC 1870
            M RKGNPI+VRLD+NR SDSSWF+DYYY KLVYQD+NLRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFNDYYYSKLVYQDINLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 1869 VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKVKSIE------HSDTEEN 1723
            +I HF K T ++ FLP RP+   R+  S     KG+WW  GKV  IE          E N
Sbjct: 61   IIIHFQKRTFINFFLPRRPQRRKRRKKSRPGKTKGRWWELGKVGPIECLYSSEGRKEERN 120

Query: 1722 EVRD--AGKRVKSVAATNQKK----------KLANGYHDQSNPLRE-----LRISGALG- 1597
            EVRD  AGKRV+S+   +QKK          K   GYHD+S  +++     LR+SGA   
Sbjct: 121  EVRDRRAGKRVESIRLDDQKKQNEIRVWPKKKQRYGYHDRSPSIKKNLSKLLRVSGAFKH 180

Query: 1596 PKAG---NDIAFL--RDDSFKKTECFKFFFPDKSSSCG---NLLQR-VPAVRPSLSYLVM 1444
            PK     NDIAFL   D SFKKT+ FKFFFP KS   G   +LL+R +PAVRPSL+YLVM
Sbjct: 181  PKYAEVVNDIAFLIENDSSFKKTKLFKFFFPKKSRYDGPTSHLLKRTLPAVRPSLNYLVM 240

Query: 1443 HDLLNAKKRMHFDPVIALNHFVTRGAAEPSTIE--GSEGGRLDQRIRSRIAFLVENSSS- 1273
              LLN KK+MHFDPV+ LNHFV  G  EPST+    ++GG LD+RIRSRIAF VE+S+S 
Sbjct: 241  QYLLNTKKKMHFDPVLVLNHFVAPGVVEPSTMNRANAQGGSLDKRIRSRIAFFVESSTSQ 300

Query: 1272 -KSLSEGK--LTHFIRQANDLRYVGTRKNSISLXXXXXXXXXFLRDGV--YKKHLIEDSR 1108
             K L+E K  LTHFIRQANDLR+ G RK +ISL         FLRDGV  Y     +D+R
Sbjct: 301  KKCLAEAKKRLTHFIRQANDLRFAGRRKTTISLFPFFGATFFFLRDGVRVYNNLFFKDAR 360

Query: 1107 EQFLGQLRTKCWNLLGKE--VKLIDKVVEQGEVGELLKGVEMMTEIILRNRRIPYGYNSY 934
            EQ LGQLR KCWNL+GK+  +KLI+K ++ G + EL+KG+EMM EIIL+N RI YG NSY
Sbjct: 361  EQLLGQLRIKCWNLMGKDKVMKLIEKFIDLGGIRELIKGIEMMIEIILKNIRIAYGSNSY 420

Query: 933  LNELEKMRSFVSDRTGAHTLIESVKIKSVYQSASLIAQDIAFQMMNRKRTFRSIFGQIVK 754
            LNE++KMRS +S+RT  +TLIESVKIKSVYQSASLIAQDI+FQ+  ++ +FRSIF +IVK
Sbjct: 421  LNEVKKMRSLLSNRTNTNTLIESVKIKSVYQSASLIAQDISFQLKKKRGSFRSIFSKIVK 480

Query: 753  EIPLVMPKGVDGIRVCVSGRLRGAEIARSECGKYGKTSCNVFNQKIDYALSEVSTRYGIL 574
            +IPLVM +GV+GIR+C SGRL GAEIAR+ECGKYGKTSCNV +QKIDYA +EVSTRYGI+
Sbjct: 481  KIPLVMKRGVEGIRICCSGRLEGAEIARTECGKYGKTSCNVLHQKIDYASAEVSTRYGIV 540

Query: 573  GVKVWISYSQR 541
            GVKVWISYS +
Sbjct: 541  GVKVWISYSPK 551


>dbj|BAD66747.1| ribosomal protein S3 [Beta vulgaris subsp. vulgaris]
            gi|54606764|dbj|BAD66787.1| ribosomal protein S3 [Beta
            vulgaris subsp. vulgaris]
          Length = 551

 Score =  603 bits (1556), Expect = e-170
 Identities = 338/551 (61%), Positives = 403/551 (73%), Gaps = 48/551 (8%)
 Frame = -3

Query: 2049 MGRKGNPIAVRLDVNRKSDSSWFSDYYYGKLVYQDVNLRSYLGSIRPPTKKTFGFRLGKC 1870
            M RKGNPI+VRLD+NR SDSSWF+DYYYGKLVYQD+NLRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFNDYYYGKLVYQDINLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 1869 VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKVKSIE------HSDTEEN 1723
            +I HF K T ++ FLP RP+   R+  S     KG+WW  GKV  IE          E N
Sbjct: 61   IIIHFQKRTFINFFLPRRPQRRKRRKKSRPGKTKGRWWELGKVGPIECLYSSEGRKEERN 120

Query: 1722 EVRD--AGKRVKSVAATNQKK----------KLANGYHDQS-----NPLRELRISGALG- 1597
            EVRD  AGKRV+S+   +QKK          K   GYHD+S     N  + LR+SGA   
Sbjct: 121  EVRDRRAGKRVESIRLDDQKKQNEIRVWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFKH 180

Query: 1596 PKAG---NDIAFL--RDDSFKKTECFKFFFPDKSSSCG---NLLQR-VPAVRPSLSYLVM 1444
            PK     NDIAFL   D SFKKT+ FKFFFP KS   G   +LL+R +PAVRPSL+Y VM
Sbjct: 181  PKYAEVVNDIAFLIENDSSFKKTKLFKFFFPKKSRYDGPTSHLLKRTLPAVRPSLNYSVM 240

Query: 1443 HDLLNAKKRMHFDPVIALNHFVTRGAAEPSTIE--GSEGGRLDQRIRSRIAFLVENSSS- 1273
              LLN KK+MHFDPV+ LNHFV  G  EPST+    ++GG LD+RIRSRIAF VE+S+S 
Sbjct: 241  QYLLNTKKKMHFDPVLVLNHFVAPGVVEPSTMNRANAQGGSLDKRIRSRIAFFVESSTSQ 300

Query: 1272 -KSLSEGK--LTHFIRQANDLRYVGTRKNSISLXXXXXXXXXFLRDGV--YKKHLIEDSR 1108
             K L+E K  LTHFIRQANDLR+ G RK +ISL         F RDGV  Y     +D+R
Sbjct: 301  KKCLAEAKKRLTHFIRQANDLRFAGRRKTTISLFPFFGATFFFPRDGVRVYNNLFFKDAR 360

Query: 1107 EQFLGQLRTKCWNLLGKE--VKLIDKVVEQGEVGELLKGVEMMTEIILRNRRIPYGYNSY 934
            EQ LGQLR KCWNL+GK+  +KLI+K ++ G + EL+KG+EMM EIIL+NRRIPYG NSY
Sbjct: 361  EQLLGQLRIKCWNLMGKDKVMKLIEKFIDLGGIRELIKGIEMMIEIILKNRRIPYGSNSY 420

Query: 933  LNELEKMRSFVSDRTGAHTLIESVKIKSVYQSASLIAQDIAFQMMNRKRTFRSIFGQIVK 754
            LNE++KMRS +S+RT  +TLIESVKIKSVYQSAS IAQDI+FQ   ++ +FRSIF +IVK
Sbjct: 421  LNEVKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQPKKKRGSFRSIFSKIVK 480

Query: 753  EIPLVMPKGVDGIRVCVSGRLRGAEIARSECGKYGKTSCNVFNQKIDYALSEVSTRYGIL 574
            +IPLVM +GV+GIR+C SGRL GAEIAR+ECGKYGKTSCNV +QKIDYA +EVSTRYGI+
Sbjct: 481  KIPLVMKRGVEGIRICCSGRLEGAEIARTECGKYGKTSCNVLHQKIDYASAEVSTRYGIV 540

Query: 573  GVKVWISYSQR 541
            GVKVWISYS +
Sbjct: 541  GVKVWISYSPK 551


>ref|NP_064078.2| rps3 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
            gi|87248050|gb|ABD36079.1| ribosomal protein S3 [Beta
            vulgaris subsp. vulgaris] gi|148491435|dbj|BAA99471.2|
            ribosomal protein S3 [Beta vulgaris subsp. vulgaris]
          Length = 551

 Score =  603 bits (1555), Expect = e-169
 Identities = 337/551 (61%), Positives = 405/551 (73%), Gaps = 48/551 (8%)
 Frame = -3

Query: 2049 MGRKGNPIAVRLDVNRKSDSSWFSDYYYGKLVYQDVNLRSYLGSIRPPTKKTFGFRLGKC 1870
            M RKGNPI+VRLD+NR SDSSWF+DYYY KLVYQD+NLRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFNDYYYSKLVYQDLNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 1869 VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKVKSIE------HSDTEEN 1723
            +I HF K T ++ FLP RP+   R+  S     KG+WW  GKV  IE          E N
Sbjct: 61   IIIHFQKRTFINFFLPRRPQRRKRRKKSRPGKTKGRWWELGKVGPIECLYSSEGRKEERN 120

Query: 1722 EVRD--AGKRVKSVAATNQKK----------KLANGYHDQSNPLRE-----LRISGALG- 1597
            EVRD  AGKRV+S+   +QKK          K   GYHD+S  +++     LR+SGA   
Sbjct: 121  EVRDRRAGKRVESIRLDDQKKQNEIRVWPKKKQRYGYHDRSPSIKKNLSKLLRVSGAFKH 180

Query: 1596 PKAG---NDIAFL--RDDSFKKTECFKFFFPDKSSSCG---NLLQR-VPAVRPSLSYLVM 1444
            PK     NDIAFL   D SFKKT+ FKFFFP KS   G   +LL+R +PAVRPSL+YLVM
Sbjct: 181  PKYAEVVNDIAFLIENDSSFKKTKLFKFFFPKKSRYDGPTSHLLKRTLPAVRPSLNYLVM 240

Query: 1443 HDLLNAKKRMHFDPVIALNHFVTRGAAEPSTIE--GSEGGRLDQRIRSRIAFLVENSSS- 1273
              LLN KK+MHFDPV+ LNHFV  G  EPST+    ++GG LD+RIRSRIAF VE+S+S 
Sbjct: 241  QYLLNTKKKMHFDPVLVLNHFVAPGVVEPSTMNRANAQGGSLDKRIRSRIAFFVESSTSQ 300

Query: 1272 -KSLSEGK--LTHFIRQANDLRYVGTRKNSISLXXXXXXXXXFLRDGV--YKKHLIEDSR 1108
             K L+E K  LTHFIRQANDLR+ G RK +ISL         FLRDGV  Y     +D+R
Sbjct: 301  KKCLAEAKKRLTHFIRQANDLRFAGRRKTTISLFPFFGATFFFLRDGVRVYNNLFFKDAR 360

Query: 1107 EQFLGQLRTKCWNLLGKE--VKLIDKVVEQGEVGELLKGVEMMTEIILRNRRIPYGYNSY 934
            EQ LGQLR KCWNL+GK+  +KLI+K ++ G + EL+KG+EMM EIIL+N RI YG NSY
Sbjct: 361  EQLLGQLRIKCWNLMGKDKVMKLIEKFIDLGGIRELIKGIEMMIEIILKNIRIAYGSNSY 420

Query: 933  LNELEKMRSFVSDRTGAHTLIESVKIKSVYQSASLIAQDIAFQMMNRKRTFRSIFGQIVK 754
            LNE++KMRS +S+RT  +TLIESVKIKSVYQSASLIAQDI+FQ+  ++ +FRSIF +IVK
Sbjct: 421  LNEVKKMRSLLSNRTNTNTLIESVKIKSVYQSASLIAQDISFQLKKKRGSFRSIFSKIVK 480

Query: 753  EIPLVMPKGVDGIRVCVSGRLRGAEIARSECGKYGKTSCNVFNQKIDYALSEVSTRYGIL 574
            +IPLVM +GV+GIR+C SGRL GAEIAR+ECGKYGKTSCNV +QKIDYA +EVSTRYGI+
Sbjct: 481  KIPLVMKRGVEGIRICCSGRLEGAEIARTECGKYGKTSCNVLHQKIDYASAEVSTRYGIV 540

Query: 573  GVKVWISYSQR 541
            GVKVWISYS +
Sbjct: 541  GVKVWISYSPK 551


>ref|YP_006666137.1| ribosomal protein S3 (mitochondrion) [Malus domestica]
            gi|401661940|emb|CBX33400.1| ribosomal protein S3
            (mitochondrion) [Malus domestica]
          Length = 554

 Score =  603 bits (1554), Expect = e-169
 Identities = 344/552 (62%), Positives = 409/552 (74%), Gaps = 48/552 (8%)
 Frame = -3

Query: 2049 MGRKGNPIAVRLDVNRKSDSSWFSDYYYGKLVYQDVNLRSYLGSIRPPTKKTFGFRLGKC 1870
            M RKGNPI+VRLD+NR SDSSWFSDYYYGKLVYQDVNLRSY GSIRPPT+ TFGFRLG C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFSDYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGTC 60

Query: 1869 VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKVKSIE--HS--DTEE--N 1723
            +I HFPK T +H FLP RP+ L R+  S     KG+WWAFGKV  I   HS  DTEE  N
Sbjct: 61   IILHFPKRTFIHFFLPRRPRRLKRREKSRPGKEKGRWWAFGKVGPIGCLHSSGDTEEERN 120

Query: 1722 EVRD--AGKRVKSVAATNQ----------KKKLANGYHDQS-----NPLRELRISGALG- 1597
            EVR   +GKRV+S+   ++          KKK   GYHD+S     N  + LR+S A   
Sbjct: 121  EVRGRGSGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSRAFKH 180

Query: 1596 PK-AG--NDIAFL--RDDSFKKTECFKFFFPDKSSSCGN---LLQR-VPAVRPSLSYLVM 1444
            PK AG  N IAFL   DD F+KT+ FKFF P KS S G+   LL+R +PAVRPS +Y VM
Sbjct: 181  PKYAGVVNGIAFLIENDDPFRKTKLFKFFLPKKSRSDGSTSHLLKRTLPAVRPSFNYSVM 240

Query: 1443 HDLLNAKKRMHFDPVIALNHFVTRGAAEPSTIEGS--EGGRLDQRIRSRIAFLVENSSS- 1273
              LLN K +MHFDPV+ LNHFV  G AEPST+ G+  +G  LD+RIRSRIA  VE+S+S 
Sbjct: 241  QYLLNTKNQMHFDPVVVLNHFVAPGVAEPSTMGGANAQGRSLDKRIRSRIALFVESSTSD 300

Query: 1272 -KSLSEGK--LTHFIRQANDLRYVGTRKNSISLXXXXXXXXXFLRDGV--YKKHLIEDSR 1108
             K L+E K  LT FIRQANDLR+ GT K +I L         F RDGV  Y     ED+R
Sbjct: 301  KKCLAEAKKRLTRFIRQANDLRFAGTTKTTIPLFPFFGATFFFPRDGVGMYNNLFFEDAR 360

Query: 1107 EQFLGQLRTKCWNLLGKE--VKLIDKVVEQGEVGELLKGVEMMTEIILRNRRIPYGYNSY 934
            EQ LGQLR KCWNL+GK+  ++LI+K ++   +GEL++G+EMM EIILRNR+IP GYNSY
Sbjct: 361  EQLLGQLRIKCWNLMGKDKVMELIEKFIDLDRIGELIRGIEMMIEIILRNRQIPCGYNSY 420

Query: 933  LNELEKMRSFVSDRTGAHTLIESVKIKSVYQSASLIAQDIAFQMMNRKRTFRSIFGQIVK 754
            LNE++KMRS +S+RT  +TLIESVKIKSVYQSAS IAQDI+FQ+ N+ R+FRSIF +IVK
Sbjct: 421  LNEVKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVK 480

Query: 753  EIPLVMPKGVDGIRVCVSGRLRGAEIARSECGKYGKTSCNVFNQKIDYALSEVSTRYGIL 574
            +IPLVM KGV+GIR+C SGR +GAEIAR+ECGKYGKTS NVFNQKIDYA ++VSTRYGIL
Sbjct: 481  DIPLVMKKGVEGIRICCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAKVSTRYGIL 540

Query: 573  GVKVWISYSQRK 538
            GVKVWISYS++K
Sbjct: 541  GVKVWISYSKKK 552


>sp|Q04716.1|RT03_PETHY RecName: Full=Ribosomal protein S3, mitochondrial
            gi|14163|emb|CAA47420.1| S3 [Petunia x hybrida]
          Length = 562

 Score =  602 bits (1551), Expect = e-169
 Identities = 342/552 (61%), Positives = 406/552 (73%), Gaps = 48/552 (8%)
 Frame = -3

Query: 2049 MGRKGNPIAVRLDVNRKSDSSWFSDYYYGKLVYQDVNLRSYLGSIRPPTKKTFGFRLGKC 1870
            M RKGNPI+VRLD+NR SDSSWFS YYYGK VYQDVNLRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFS-YYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRC 59

Query: 1869 VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKVKSI------EHSDTEEN 1723
            +I HFPK T +H FLP RP+ L R+  S     KG+W AFGKV  I      + ++ E N
Sbjct: 60   IILHFPKRTFIHFFLPRRPRRLKRREKSRPVKEKGRWGAFGKVGPIGCLHSSDGTEEERN 119

Query: 1722 EVRD--AGKRVKSVAATNQ----------KKKLANGYHDQS-----NPLRELRISGALG- 1597
            EVR   AGKRV+S+   ++          KKK   GYHD+S     N  + LR+SGA   
Sbjct: 120  EVRGRGAGKRVESIRLDDREKQNEIRIWPKKKQGYGYHDRSPSIKKNLSKSLRVSGAFKH 179

Query: 1596 PK-AG--NDIAFL--RDDSFKKTECFKFFFPDKSSS---CGNLLQR-VPAVRPSLSYLVM 1444
            PK AG  NDIAFL   DDSF+KT  FKFFFP KS S     +LL+R +PAVRPSL+Y VM
Sbjct: 180  PKYAGIENDIAFLIENDDSFRKTNLFKFFFPKKSRSDRPTSHLLKRTLPAVRPSLNYSVM 239

Query: 1443 HDLLNAKKRMHFDPVIALNHFVTRGAAEPSTIEGS--EGGRLDQRIRSRIAFLVENSSS- 1273
              LLN K ++HFDPV+ LNHFV  G AEPST+ G+  +G  LD+RI S IAF VENS+S 
Sbjct: 240  QYLLNTKNKIHFDPVVVLNHFVAPGVAEPSTMGGANAQGRSLDKRIASCIAFFVENSTSE 299

Query: 1272 -KSLSEGK--LTHFIRQANDLRYVGTRKNSISLXXXXXXXXXFLRDGV--YKKHLIEDSR 1108
             K L+E K  +THFIRQANDLR+ GT K +ISL         F RDGV  Y     ED+R
Sbjct: 300  KKCLAEAKKRVTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGVYNNLFFEDAR 359

Query: 1107 EQFLGQLRTKCWNLLGKE--VKLIDKVVEQGEVGELLKGVEMMTEIILRNRRIPYGYNSY 934
            EQ LGQLR KCWNL+GK+  ++LI+K ++   +GEL++G+EMM EIILRNRRIPYGYN Y
Sbjct: 360  EQLLGQLRRKCWNLMGKDKVMELIEKFIDLNRIGELIRGIEMMIEIILRNRRIPYGYNYY 419

Query: 933  LNELEKMRSFVSDRTGAHTLIESVKIKSVYQSASLIAQDIAFQMMNRKRTFRSIFGQIVK 754
            LNE++KMRS + +RT  +TLIESVKIKSVYQSAS IAQDI+FQ  N+ R+FRSIF +IVK
Sbjct: 420  LNEVKKMRSLLYNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVK 479

Query: 753  EIPLVMPKGVDGIRVCVSGRLRGAEIARSECGKYGKTSCNVFNQKIDYALSEVSTRYGIL 574
            +IPLVM KGV+GIR+C SGRL GAEIAR+ECGKYGKTS NVFNQKIDYA +EVSTRYGI 
Sbjct: 480  DIPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGIS 539

Query: 573  GVKVWISYSQRK 538
            GVKVWISYS++K
Sbjct: 540  GVKVWISYSKKK 551


>gb|AGC78893.1| ribosomal protein S3 (mitochondrion) [Vicia faba]
          Length = 563

 Score =  600 bits (1548), Expect = e-169
 Identities = 340/552 (61%), Positives = 404/552 (73%), Gaps = 48/552 (8%)
 Frame = -3

Query: 2049 MGRKGNPIAVRLDVNRKSDSSWFSDYYYGKLVYQDVNLRSYLGSIRPPTKKTFGFRLGKC 1870
            M RKGNPI+VRLD+NR SDSS FSDYYYGKLVYQDVNLRSY GSIRPP + TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSRFSDYYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRC 60

Query: 1869 VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKVKSIE--HS----DTEEN 1723
            ++ HFPK T +H FLP RP+ L R+  S     KG+WWAFGKV  I   HS    + E N
Sbjct: 61   ILIHFPKRTFIHFFLPRRPRRLKRRDKSRPGKEKGRWWAFGKVGPIGCLHSSNKKEEERN 120

Query: 1722 EVRD--AGKRVKSVAATNQ----------KKKLANGYHDQS-----NPLRELRISGALG- 1597
            EVR   AGKRV+S+   ++          KKK   GYHD+S     N  + LR+SGA   
Sbjct: 121  EVRGRRAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFKH 180

Query: 1596 PK---AGNDIAFLRD--DSFKKTECFKFFFPDKSSSCG---NLLQR-VPAVRPSLSYLVM 1444
            PK   A NDIAFL +  DSF+KT+ FKFFFP KS S G   +L QR +PAVRPSL+Y VM
Sbjct: 181  PKYAGAVNDIAFLIENYDSFRKTKFFKFFFPKKSRSDGPTSHLFQRTLPAVRPSLNYSVM 240

Query: 1443 HDLLNAKKRMHFDPVIALNHFVTRGAAEPSTIEGS--EGGRLDQRIRSRIAFLVENSSS- 1273
                  K +MHFDPV+ LNHFV  G AEPST+ G+  +G  LD+RIRSRIAF VE+S+S 
Sbjct: 241  QYFFCRKNQMHFDPVVVLNHFVAPGVAEPSTMGGANAQGRSLDKRIRSRIAFFVESSTSE 300

Query: 1272 -KSLSEGK--LTHFIRQANDLRYVGTRKNSISLXXXXXXXXXFLRD--GVYKKHLIEDSR 1108
             K L+E K  LTH IR ANDLR+ GT K +ISL         F RD  G+Y     ED+R
Sbjct: 301  KKCLAEAKKRLTHLIRLANDLRFAGTTKTTISLFPFFGATFFFPRDRVGIYNNLFFEDAR 360

Query: 1107 EQFLGQLRTKCWNLLGKE--VKLIDKVVEQGEVGELLKGVEMMTEIILRNRRIPYGYNSY 934
            E  LGQLR KCWNL+GK+  ++LIDK ++ G +GE +KG+EMM EIILRNR+IPYGYNSY
Sbjct: 361  EPLLGQLRIKCWNLMGKDKVMELIDKFIDLGRIGEWIKGIEMMIEIILRNRKIPYGYNSY 420

Query: 933  LNELEKMRSFVSDRTGAHTLIESVKIKSVYQSASLIAQDIAFQMMNRKRTFRSIFGQIVK 754
            LNE++KMRS +S+RT  +TLIESVKIKSVYQSAS IAQDI+FQ+  + R+FRSIF +IVK
Sbjct: 421  LNEVKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIFSRIVK 480

Query: 753  EIPLVMPKGVDGIRVCVSGRLRGAEIARSECGKYGKTSCNVFNQKIDYALSEVSTRYGIL 574
            +IPLVM KGV+GIR+C SGR  GAEIAR+ECGKYGKTS NVFNQKIDYA +EVSTRYGI 
Sbjct: 481  DIPLVMKKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGIS 540

Query: 573  GVKVWISYSQRK 538
            GVKVWISYS++K
Sbjct: 541  GVKVWISYSKKK 552


>ref|YP_005090420.1| rps3 gene product (mitochondrion) [Boea hygrometrica]
            gi|340549496|gb|AEK53317.1| ribosomal protein S3
            (mitochondrion) [Boea hygrometrica]
          Length = 558

 Score =  600 bits (1548), Expect = e-169
 Identities = 334/549 (60%), Positives = 404/549 (73%), Gaps = 45/549 (8%)
 Frame = -3

Query: 2049 MGRKGNPIAVRLDVNRKSDSSWFSDYYYGKLVYQDVNLRSYLGSIRPPTKKTFGFRLGKC 1870
            M RKGNPI+VRLD+NR SDSSWFS+YYY K VYQD+NLRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFSEYYYAKSVYQDLNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 1869 VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKVKSI------EHSDTEEN 1723
            +I HFPK T +H FLP RP+ L R+  S     KG+WW FGKV  I      + ++ E N
Sbjct: 61   IILHFPKRTFLHLFLPRRPRRLKRREKSRPGKAKGRWWEFGKVGPIGCLHSSDGTEEERN 120

Query: 1722 EVRD--AGKRVKSVAATNQ----------KKKLANGYHDQS-----NPLRELRISGALG- 1597
            EVR   +G+RV+S+   ++          KKK   GYHD+S     N  + LR+SGA   
Sbjct: 121  EVRGRGSGERVESIRLDDREKQNEIRIWPKKKQGYGYHDRSPSIKKNLSKSLRVSGAFKH 180

Query: 1596 PKAG--NDIAFL--RDDSFKKTECFKFFFPDKSSSCG---NLLQR-VPAVRPSLSYLVMH 1441
            P AG  N IAFL   DDSF+KT+ FKFFFP KS S G   +LL+R +PAVR SL+Y VM 
Sbjct: 181  PNAGVVNGIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLLKRTLPAVRSSLNYSVMQ 240

Query: 1440 DLLNAKKRMHFDPVIALNHFVTRGAAEPSTIEGSEGGR--LDQRIRSRIAFLVENSSS-- 1273
             LLN KK+MHFDPV+ LNHFV  G AEPST+ G+      LD+RIRSRIAF +E+S+S  
Sbjct: 241  YLLNTKKKMHFDPVVVLNHFVAPGVAEPSTMGGANAQERSLDKRIRSRIAFFLESSTSEK 300

Query: 1272 KSLSEGK--LTHFIRQANDLRYVGTRKNSISLXXXXXXXXXFLRDGVYKKHLIEDSREQF 1099
            K L+E K  LTHFIRQA DLR+ GT K +ISL         F R GVY     E++R+Q 
Sbjct: 301  KCLAEAKKRLTHFIRQAIDLRFAGTTKTTISLFPFFGATFFFPRVGVYNNLFFENARQQL 360

Query: 1098 LGQLRTKCWNLLGKE--VKLIDKVVEQGEVGELLKGVEMMTEIILRNRRIPYGYNSYLNE 925
            L QLR KCWNL+ K+  ++LI+K ++ G +GEL+KG+EMM EIILRNRRIPYGYNSYLNE
Sbjct: 361  LRQLRRKCWNLMAKDKVMELIEKFIDLGRIGELIKGIEMMIEIILRNRRIPYGYNSYLNE 420

Query: 924  LEKMRSFVSDRTGAHTLIESVKIKSVYQSASLIAQDIAFQMMNRKRTFRSIFGQIVKEIP 745
            ++KMRS +S+RT  +TLIESVKIKSVYQSAS IAQDI+FQ+  + R+FRSIF +IVK IP
Sbjct: 421  MKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQLRTKTRSFRSIFTKIVKNIP 480

Query: 744  LVMPKGVDGIRVCVSGRLRGAEIARSECGKYGKTSCNVFNQKIDYALSEVSTRYGILGVK 565
            LVM KGV+GIR+C SGR  GAEIAR+ECGKYGKTS NVF+QKIDYA +EVSTRYGILGVK
Sbjct: 481  LVMKKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGILGVK 540

Query: 564  VWISYSQRK 538
            VWISYSQ++
Sbjct: 541  VWISYSQKR 549