BLASTX nr result

ID: Papaver27_contig00027939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00027939
         (2693 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007203452.1| hypothetical protein PRUPE_ppa022115mg [Prun...   162   1e-65
ref|XP_007217321.1| hypothetical protein PRUPE_ppa019733mg [Prun...   161   2e-65
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...   153   1e-62
ref|XP_007203344.1| hypothetical protein PRUPE_ppa020282mg [Prun...   140   3e-61
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   139   1e-59
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...   135   3e-58
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   151   6e-58
ref|XP_007224193.1| hypothetical protein PRUPE_ppa017155mg, part...   137   1e-57
gb|AAQ19327.1| bZIP-like protein [Oryza sativa Japonica Group]        144   3e-57
gb|EEC68887.1| hypothetical protein OsI_37529 [Oryza sativa Indi...   144   3e-57
ref|NP_001066197.2| Os12g0156200 [Oryza sativa Japonica Group] g...   144   3e-57
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   130   1e-56
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   134   1e-55
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta...   128   7e-55
gb|AAC28197.1| contains similarity to reverse transcriptases [Ar...   103   1e-54
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...   137   3e-54
gb|AAP54617.2| retrotransposon protein, putative, unclassified [...   137   3e-54
gb|EEE52364.1| hypothetical protein OsJ_34428 [Oryza sativa Japo...   129   4e-54
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268...   157   1e-53
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...   127   2e-53

>ref|XP_007203452.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
            gi|462398983|gb|EMJ04651.1| hypothetical protein
            PRUPE_ppa022115mg [Prunus persica]
          Length = 1755

 Score =  162 bits (410), Expect(2) = 1e-65
 Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 8/315 (2%)
 Frame = +2

Query: 8    EKHNFSTNSSPSFQIVHDTIDMHGLRDVPFTGNPFTWSNHRKSTKLVKTRIDRALANNNW 187
            EK      ++   Q   + +D  G RD+ F G  FTW   R     V+ R+DRALA  +W
Sbjct: 558  EKEGGPLRNNRQMQGFRNIVDKLGFRDLGFNGYKFTWKC-RFGDGFVRVRLDRALATTSW 616

Query: 188  FTSFKDSVINNLLPHGSDHAPIPLHIHLP--DKTNNKPYRFYKVWLSNPLCKEVLRKSCH 361
               F    + +L P  SDH PI + I      K+  + + F  +W ++  C++ +++   
Sbjct: 617  QNLFPGFSVQHLDPSRSDHLPILVRIRHATCQKSRYRRFHFEAMWTTHVDCEKTIKQVWE 676

Query: 362  LEESLH-LNELPKKIQQTTEALRDWNHKSFGHVKTEIRRTQNLLQKAKNSP-----RQDT 523
               +L  +  L KKI+Q T  L+ W+  +FGH+K E R  +  L     +P      +D 
Sbjct: 677  SVGNLDPMVGLDKKIKQMTWVLQRWSKSTFGHIKEETRVLRAKLASLFQAPYSERVEEDR 736

Query: 524  TLIKSLEDQLNKWYDKSAQITYHQSREQILWFDDRNNKYFHNKANFRRRRNHIDTLQDSN 703
             +++   D+L     K+      +SRE  L   D+N  YFH KA  RRRRN I  L+DSN
Sbjct: 737  RVVQKSLDEL---LAKNELYWCQRSRENWLKAGDKNTSYFHQKATNRRRRNIIKGLEDSN 793

Query: 704  GNWISNKEEI*KLLLKHFRDIYTSSNPTMDADLLNLIQPCVTEK*NQMLIKIPSSDEIKE 883
            G W ++++ I  +++ +F D++ SS  +M  ++L+ ++P VT    Q+LI   S  EIK+
Sbjct: 794  GCWRTSRQGITSIVIDYFGDLFRSSGSSMMEEILSALEPKVTADMQQVLIADFSYQEIKD 853

Query: 884  AMFQINPWGVPGPDG 928
            A+FQ+ P   PGPDG
Sbjct: 854  AVFQMQPSKAPGPDG 868



 Score =  117 bits (293), Expect(2) = 1e-65
 Identities = 64/183 (34%), Positives = 95/183 (51%), Gaps = 31/183 (16%)
 Frame = +1

Query: 940  FYQQFWDIVETNIVSLVQNFFMTGQFPSQINHTFQVLIPKLGISTKPRDCRPISLCNITY 1119
            FYQ++W IV  ++V+ V+ F  + +   Q+NHTF  LIPK+         RPISLCN+ Y
Sbjct: 873  FYQKYWRIVGDDVVAAVRAFLQSNEMLRQLNHTFVTLIPKVKEPRTMAQLRPISLCNVLY 932

Query: 1120 KLITKIL------------------------------VVQEMVHYMK-KTLFYTGVVGIK 1206
            ++  K L                              V  E+ H++K +     G + +K
Sbjct: 933  RIGAKTLANRMKFVMQSVISESQSAFVPGRLITDNSIVAFEIAHFLKQRRRGRKGSLALK 992

Query: 1207 LDMEKTFDRMEWSFLHQILLHLGFSTKWCQLINYCVSTAFISMLLNGVPMEPIIPTRGLR 1386
            LDM K +DR+EW FL +++L +GF   W +++  CV+T   S L+NG P   + PTRGLR
Sbjct: 993  LDMSKAYDRVEWEFLEKMMLAMGFPILWVRMVMDCVTTVSYSFLVNGEPTRILYPTRGLR 1052

Query: 1387 QDD 1395
            Q D
Sbjct: 1053 QGD 1055



 Score = 87.0 bits (214), Expect(2) = 4e-31
 Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 1/209 (0%)
 Frame = +2

Query: 1460 FSKHMNRDSCEEVTRKLQMRELDLNEKYLVTNFIIPRSRDNCLDPSINKI*NRLPGWQGK 1639
            FS +++ D+   +   L +  +D +  YL    ++ R++  C      ++  +L GW+ +
Sbjct: 1141 FSANIHMDTQSRLASVLGVPRVDSHATYLGLPMMLGRNKTVCFRYLKERVWKKLQGWREQ 1200

Query: 1640 LINQAGRAVQIQTTLSTSVQYQMGVFMLPDKTHKKINQIQRRYFWNHK-*NKGFNPKSWS 1816
             ++ AG+ V ++    +   Y M  F+LP     +I Q+  R++W  +  N+  +   W 
Sbjct: 1201 TLSIAGKEVLLKVVAQSIPLYVMSCFLLPQGLCHEIEQMMARFWWGQQGENRKIHWMRWE 1260

Query: 1817 SVCTSKRFGGLRFKDSKKFNIAMLTKLAWRLLTQPQKEWVKVLNAIHVKNKDPLVEDISR 1996
             +C +K  GG+ F+  + FN+AML K  WRL+  P     ++L A +    +   E    
Sbjct: 1261 RLCKAKTEGGMGFRCLQAFNMAMLAKQGWRLVHNPHSLASRLLKAKYFPQTN-FWEATLG 1319

Query: 1997 KNSSWVWQSIQHGL*VLKQY*IWEIGDGK 2083
               S VW+SI     VL+    ++IGDGK
Sbjct: 1320 SRPSCVWKSIWTARKVLEMGSRFQIGDGK 1348



 Score = 77.8 bits (190), Expect(2) = 4e-31
 Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
 Frame = +3

Query: 2166 DTRVADLTDTE-KKTWNIQLLSQYFNPDQIKEIMTIKIPSKGE-DTLRWSLPYCGAFTTK 2339
            +T+V++L   E    W++Q L+  F P  + +I+ I +  +   D + W+    G FT K
Sbjct: 1376 NTKVSELICNEGSPQWDLQKLNNLFLPVDVVDIVRIPLSIRAPPDRIVWNYDKHGLFTVK 1435

Query: 2340 YVYNELSKNNAG----ISHLHQMEGKGWLKLWNMEVPHKIQMFL*KCCHDILPVKKKLFS 2507
              Y    +  +G     S  +   G  W  +WN  VP K+++F  +  HDILP K  L  
Sbjct: 1436 SAYRVALRVTSGDEDESSSSNSDTGMLWRHIWNATVPTKLKIFAWRVAHDILPTKANLIK 1495

Query: 2508 KNNNMDQLCPLCLNSEETSTHLFLHCQFAEVIW 2606
            K  +M  +C  C +  E++ H+   C FA   W
Sbjct: 1496 KGVDMQDMCMFCGDITESALHVLAMCPFAVATW 1528


>ref|XP_007217321.1| hypothetical protein PRUPE_ppa019733mg [Prunus persica]
            gi|462413471|gb|EMJ18520.1| hypothetical protein
            PRUPE_ppa019733mg [Prunus persica]
          Length = 1275

 Score =  161 bits (408), Expect(2) = 2e-65
 Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 8/315 (2%)
 Frame = +2

Query: 8    EKHNFSTNSSPSFQIVHDTIDMHGLRDVPFTGNPFTWSNHRKSTKLVKTRIDRALANNNW 187
            EK      ++   Q   + +D  G RD+ F G  FTW   R     V+ R+DRALA  +W
Sbjct: 104  EKEGGPLRNNRQMQGFRNIVDKLGFRDLGFNGYKFTWKC-RFGDGFVRVRLDRALATTSW 162

Query: 188  FTSFKDSVINNLLPHGSDHAPIPLHIHLPDKTNNKPYRFY--KVWLSNPLCKEVLRKSCH 361
               F    + +L P  SDH PI + I       ++ +RF+   +W ++  C++ +++   
Sbjct: 163  QNLFPGFSVQHLDPSRSDHLPILVRIRHATCQKSRYHRFHFEAMWTTHVDCEKTIKQVWE 222

Query: 362  LEESLH-LNELPKKIQQTTEALRDWNHKSFGHVKTEIRRTQNLLQKAKNSP-----RQDT 523
                L  +  L KKI+Q T  L+ W+  +FGH+K E R  +  L     +P      +D 
Sbjct: 223  SVGDLDPMVGLDKKIKQMTWVLQRWSKSTFGHIKEETRVLRAKLASLFQAPYSERVEEDR 282

Query: 524  TLIKSLEDQLNKWYDKSAQITYHQSREQILWFDDRNNKYFHNKANFRRRRNHIDTLQDSN 703
             +++   D+L     K+      +SRE  L   D+N  YFH KA  RRRRN I  L+DSN
Sbjct: 283  RVVQKSLDEL---LAKNELYWCQRSRENWLKAGDKNTSYFHQKATNRRRRNIIKGLEDSN 339

Query: 704  GNWISNKEEI*KLLLKHFRDIYTSSNPTMDADLLNLIQPCVTEK*NQMLIKIPSSDEIKE 883
            G W ++++ I  +++ +F D++ SS  +M  ++L+ ++P VT    Q+LI   S  EIK+
Sbjct: 340  GCWRTSRQGITSIVIDYFGDLFRSSGSSMMEEILSALEPKVTADMQQVLIADFSYQEIKD 399

Query: 884  AMFQINPWGVPGPDG 928
            A+FQ+ P   PGPDG
Sbjct: 400  AVFQMQPSKAPGPDG 414



 Score =  117 bits (293), Expect(2) = 2e-65
 Identities = 64/183 (34%), Positives = 95/183 (51%), Gaps = 31/183 (16%)
 Frame = +1

Query: 940  FYQQFWDIVETNIVSLVQNFFMTGQFPSQINHTFQVLIPKLGISTKPRDCRPISLCNITY 1119
            FYQ++W IV  ++V+ V+ F  + +   Q+NHTF  LIPK+         RPISLCN+ Y
Sbjct: 419  FYQKYWRIVGDDVVAAVRAFLQSNEMLRQLNHTFVTLIPKVKEPRTMAQLRPISLCNVLY 478

Query: 1120 KLITKIL------------------------------VVQEMVHYMK-KTLFYTGVVGIK 1206
            ++  K L                              V  E+ H++K +     G + +K
Sbjct: 479  RIGAKTLANRMKFVMQSVISESQSAFVPGRLIIDNSIVAFEIAHFLKQRRRGRKGSLALK 538

Query: 1207 LDMEKTFDRMEWSFLHQILLHLGFSTKWCQLINYCVSTAFISMLLNGVPMEPIIPTRGLR 1386
            LDM K +DR+EW FL +++L +GF   W +++  CV+T   S L+NG P   + PTRGLR
Sbjct: 539  LDMSKAYDRVEWEFLEKMMLAMGFPILWVRMVMDCVTTVSYSFLVNGEPTRILYPTRGLR 598

Query: 1387 QDD 1395
            Q D
Sbjct: 599  QGD 601



 Score = 83.6 bits (205), Expect(2) = 4e-30
 Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
 Frame = +2

Query: 1469 HMNRDSCEEVTRKLQMRELDLNEKYLVTNFIIPRSRDNCLDPSINKI*NRLPGWQGKLIN 1648
            +++ D+   +   L +  +D +  YL    ++ R++  C      ++  +L GW+ + ++
Sbjct: 664  NIHMDTQSRLASVLGVPRVDSHATYLGLPMMLGRNKTVCFRYLKERVWKKLQGWREQTLS 723

Query: 1649 QAGRAVQIQTTLSTSVQYQMGVFMLPDKTHKKINQIQRRYFWNHK-*NKGFNPKSWSSVC 1825
             AG+ V ++    +   Y M  F+LP     +I Q+  R++W  +  N+  +   W  +C
Sbjct: 724  IAGKEVLLKVVAQSIPLYVMSCFLLPQGLCHEIEQMMARFWWGQQGENRKIHWMRWERLC 783

Query: 1826 TSKRFGGLRFKDSKKFNIAMLTKLAWRLLTQPQKEWVKVLNAIHVKNKDPLVEDISRKNS 2005
             +K  GG+ F+  + FN+AML K  WRL+  P     ++L A +    +   E       
Sbjct: 784  KAKTEGGMGFRCLQAFNMAMLAKQGWRLVHNPHSLASRLLKAKYFPQTN-FWEATLGSRP 842

Query: 2006 SWVWQSIQHGL*VLKQY*IWEIGDGK 2083
            S VW+SI     VL+    ++IGDGK
Sbjct: 843  SCVWKSIWTARKVLEMGSRFQIGDGK 868



 Score = 77.8 bits (190), Expect(2) = 4e-30
 Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
 Frame = +3

Query: 2166 DTRVADLTDTE-KKTWNIQLLSQYFNPDQIKEIMTIKIPSKGE-DTLRWSLPYCGAFTTK 2339
            +T+V++L   E    W++Q L+  F P  + +I+ I +  +   D + W+    G FT K
Sbjct: 896  NTKVSELICNEGSPQWDLQKLNNLFLPVDVVDIVRIPLSIRAPPDRIVWNYDKHGLFTVK 955

Query: 2340 YVYNELSKNNAG----ISHLHQMEGKGWLKLWNMEVPHKIQMFL*KCCHDILPVKKKLFS 2507
              Y    +  +G     S  +   G  W  +WN  VP K+++F  +  HDILP K  L  
Sbjct: 956  SAYRVALRVTSGDEDESSSSNSDTGMLWRHIWNATVPTKLKIFAWRVAHDILPTKANLIK 1015

Query: 2508 KNNNMDQLCPLCLNSEETSTHLFLHCQFAEVIW 2606
            K  +M  +C  C +  E++ H+   C FA   W
Sbjct: 1016 KGVDMQDMCMFCGDITESALHVLAMCPFAVATW 1048


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  153 bits (386), Expect(2) = 1e-62
 Identities = 93/297 (31%), Positives = 157/297 (52%), Gaps = 7/297 (2%)
 Frame = +2

Query: 59   DTIDMHGLRDVPFTGNPFTWSNHRKSTKLVKTRIDRALANNNWFTSFKDSVINNLLPHGS 238
            DT+D   LRD+ + G  +TW   R  +  ++ R+DR L +N+W   + DSV  + + + S
Sbjct: 162  DTLDTLALRDLGYVGTWYTWERGRSPSTCIRERLDRYLCSNSWLDLYPDSVPEHTIRYKS 221

Query: 239  DHAPIPLHIHLPDKTNNKPYR--FYKVWLSNPLCKEVLRKSCHLEESLHLNELPKKIQQT 412
            DH+ I L      +   K  R  F   WL +  C+ V+R+S    E      +  ++   
Sbjct: 222  DHSAIVLRSQRAGRPRGKTRRLHFETSWLLDDECEAVVRESWENSEG---EVMTGRVASM 278

Query: 413  TEALRDWNHKSFGHVKTEIRRTQNLLQKAKNSPRQDTTLIKS--LEDQLNKWYDKSAQIT 586
             + L  W+ K F ++  +I   +  L  A+N+P  ++   +   LE +L++ + K     
Sbjct: 279  GQCLVRWSTKKFKNLSKQIETAEKALSVAQNNPISESACQECVLLEKKLDELHAKHEAYW 338

Query: 587  YHQSREQILWFDDRNNKYFHNKANFRRRRNHIDTLQDSNGNWISNKEEI*KLLLKHFRDI 766
            Y +SR   +   D+N KYFH+KA+ R++RN +  L D  G W    + I  +   +F  I
Sbjct: 339  YLRSRVAEVKDGDKNTKYFHHKASQRKKRNFVKGLFDGLGTWREEADHIENIFTSYFSSI 398

Query: 767  YTSSNP---TMDADLLNLIQPCVTEK*NQMLIKIPSSDEIKEAMFQINPWGVPGPDG 928
            +TSSNP   +++A ++++I+P VTE+ N  L++  S DEI  A+ Q++P   PGPDG
Sbjct: 399  FTSSNPSDLSLEA-VMSVIEPVVTEEHNLKLLEPFSKDEILAALQQMHPCKAPGPDG 454



 Score =  117 bits (292), Expect(2) = 1e-62
 Identities = 65/183 (35%), Positives = 95/183 (51%), Gaps = 31/183 (16%)
 Frame = +1

Query: 940  FYQQFWDIVETNIVSLVQNFFMTGQFPSQINHTFQVLIPKLGISTKPRDCRPISLCNITY 1119
            FYQ+FW IV  ++ S + N       PS +N+T   LIPK+   TK  + RPI+LCN+ Y
Sbjct: 459  FYQRFWHIVGDDVTSFISNILHGHSSPSCVNNTNIALIPKVKNPTKAAEFRPIALCNVLY 518

Query: 1120 KLITKILVVQ------------------------------EMVHYMK-KTLFYTGVVGIK 1206
            KL++K +V++                              E+ H MK +     G + +K
Sbjct: 519  KLMSKAIVMRLKSFLPEIISENQSAFVPGRLITDNALIAMEVFHSMKNRNRSRKGTIAMK 578

Query: 1207 LDMEKTFDRMEWSFLHQILLHLGFSTKWCQLINYCVSTAFISMLLNGVPMEPIIPTRGLR 1386
            LDM K +DR+EW FL ++LL +GF  +W  LI   VS+   S ++NG     ++P RGLR
Sbjct: 579  LDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLIMEFVSSVTYSFIINGSVCGSVVPARGLR 638

Query: 1387 QDD 1395
            Q D
Sbjct: 639  QGD 641



 Score =  121 bits (303), Expect(2) = 2e-38
 Identities = 71/208 (34%), Positives = 116/208 (55%), Gaps = 1/208 (0%)
 Frame = +2

Query: 1460 FSKHMNRDSCEEVTRKLQMRELDLNEKYLVTNFIIPRSRDNCLDPSINKI*NRLPGWQGK 1639
            +S+ ++    +E+T  L MR++D +EKYL    I  RS+    D  I++I  +L GW+ K
Sbjct: 727  YSRGVSVSQKDELTNILNMRQVDRHEKYLGIPSISGRSKKAIFDSLIDRIWKKLQGWKEK 786

Query: 1640 LINQAGRAVQIQTTLSTSVQYQMGVFMLPDKTHKKINQIQRRYFW-NHK*NKGFNPKSWS 1816
            L+++AG+ V +++ +     Y MGV+  P    +KI     R++W +    +  + K+W 
Sbjct: 787  LLSRAGKEVLLKSVIQAIPTYLMGVYKFPVFIIQKIQSAMARFWWGSSDTQRKIHWKNWD 846

Query: 1817 SVCTSKRFGGLRFKDSKKFNIAMLTKLAWRLLTQPQKEWVKVLNAIHVKNKDPLVEDISR 1996
            S+C  K FGG+ FKD   FN A+L + AWRL  +PQ    +V+ A +  N D L   +  
Sbjct: 847  SMCNLKCFGGMGFKDLTIFNDALLGRQAWRLTREPQSLLGRVMKAKYFPNCDFLNAPLGH 906

Query: 1997 KNSSWVWQSIQHGL*VLKQY*IWEIGDG 2080
             +SS+ W SI     +LK+  IW +G+G
Sbjct: 907  -SSSYSWSSIWSSKALLKEGVIWRVGNG 933



 Score = 68.2 bits (165), Expect(2) = 2e-38
 Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 1/169 (0%)
 Frame = +3

Query: 2175 VADLTDTEKKTWNIQLLSQYFNPDQIKEIMTIKIPSKG-EDTLRWSLPYCGAFTTKYVYN 2351
            V++L D ++  W   LL  + N   ++ I+   + +    D L W+      ++ K  Y 
Sbjct: 963  VSELIDFDRMEWKTSLLESFLNERDLRCILASPLSATPVPDELTWAFTKDATYSVKTAY- 1021

Query: 2352 ELSKNNAGISHLHQMEGKGWLKLWNMEVPHKIQMFL*KCCHDILPVKKKLFSKNNNMDQL 2531
             +      + + HQ     W+ +W+++V  K++ FL + C   LPV+  L  ++   D L
Sbjct: 1022 -MIGKGGNLDNFHQ----AWVDIWSLDVSPKVRHFLWRLCTTSLPVRSLLKHRHLTDDDL 1076

Query: 2532 CPLCLNSEETSTHLFLHCQFAEVIWVGIYAALLQSLKEKIFVIDWIVSW 2678
            CP      ET  H    C     +W+      L S    + + D +VSW
Sbjct: 1077 CPWGCGEIETQRHAIFDCPKMRDLWLDSGCQNLCSRDASMSMCDLLVSW 1125


>ref|XP_007203344.1| hypothetical protein PRUPE_ppa020282mg [Prunus persica]
            gi|462398875|gb|EMJ04543.1| hypothetical protein
            PRUPE_ppa020282mg [Prunus persica]
          Length = 1496

 Score =  140 bits (352), Expect(2) = 3e-61
 Identities = 87/294 (29%), Positives = 158/294 (53%), Gaps = 6/294 (2%)
 Frame = +2

Query: 65   IDMHGLRDVPFTGNPFTWSNHRKSTKLVKTRIDRALANNNWFTSFKDSVINNLLPHGSDH 244
            ID    +D+ +TG  +TW   R +   ++ R+DRALA  +W + F  + + +L P  SDH
Sbjct: 536  IDTCRFKDLGYTGPKYTW--WRNNPMEIRIRLDRALATADWCSRFLGTKVIHLNPTKSDH 593

Query: 245  APIPLHIHLPDKTNNKPYRFYKVWLSNPLCKEVLR----KSCHLEESLHLNELPKKIQQT 412
             P+            K +RF ++W  +  C + ++    ++C         E   K++ T
Sbjct: 594  LPL-----------KKLFRFEEMWAEHVNCMQTIQDGWQRTCRGSAPFTTTE---KLKCT 639

Query: 413  TEALRDWNHKSFGHVKTEIRRTQNLLQKAKNSPRQDTT--LIKSLEDQLNKWYDKSAQIT 586
               L  W+  +FGH+  +I+ T+  L +  ++P    T  L  +L  QL+    K+    
Sbjct: 640  RHKLLGWSKCNFGHLPNQIKITREKLGELLDAPPSHHTAELRNALTKQLDSLMAKNEVYW 699

Query: 587  YHQSREQILWFDDRNNKYFHNKANFRRRRNHIDTLQDSNGNWISNKEEI*KLLLKHFRDI 766
               SR   L   DRN+K+FH KA+ RRRRN I  L+D +G+W + ++ + + ++ +F+ +
Sbjct: 700  RQCSRATWLKAGDRNSKFFHYKASSRRRRNTISALEDEHGHWQTTEQGLTQTVVNYFQHL 759

Query: 767  YTSSNPTMDADLLNLIQPCVTEK*NQMLIKIPSSDEIKEAMFQINPWGVPGPDG 928
            ++S+  +   ++++ ++  VTE+ NQ L+ + + +EIK A+FQ++P   PGPDG
Sbjct: 760  FSSTGSSEYTEVVDGVRGRVTEEMNQALLAVFTPEEIKIALFQMHPSKAPGPDG 813



 Score =  125 bits (314), Expect(2) = 3e-61
 Identities = 69/183 (37%), Positives = 98/183 (53%), Gaps = 31/183 (16%)
 Frame = +1

Query: 940  FYQQFWDIVETNIVSLVQNFFMTGQFPSQINHTFQVLIPKLGISTKPRDCRPISLCNITY 1119
            FYQ++W IV  ++V+ V +FF TG+   +IN T   LIPK+         RPISLCN+ Y
Sbjct: 818  FYQKYWPIVGEDVVAAVLHFFKTGKLLKRINFTHVALIPKVHEPKNMMQLRPISLCNVLY 877

Query: 1120 KLITKILVVQ------------------------------EMVHYM-KKTLFYTGVVGIK 1206
            K+  K+L  +                              E++H M KK     G + +K
Sbjct: 878  KIGAKVLTTRLKAILPTLISDTQSAFVPGRAISDNSIVAFELLHMMHKKNQGRQGYLALK 937

Query: 1207 LDMEKTFDRMEWSFLHQILLHLGFSTKWCQLINYCVSTAFISMLLNGVPMEPIIPTRGLR 1386
            +DM K +DR+EWSFL  ++  +GF+ +W QLI  CV+T   S +LNG P+  +IP RGLR
Sbjct: 938  IDMSKAYDRVEWSFLEALMKGMGFAPRWIQLIMECVTTVSYSFMLNGNPVGYVIPQRGLR 997

Query: 1387 QDD 1395
            Q D
Sbjct: 998  QGD 1000



 Score =  103 bits (258), Expect(2) = 6e-30
 Identities = 60/208 (28%), Positives = 106/208 (50%), Gaps = 1/208 (0%)
 Frame = +2

Query: 1460 FSKHMNRDSCEEVTRKLQMRELDLNEKYLVTNFIIPRSRDNCLDPSINKI*NRLPGWQGK 1639
            FS +M+R   + +   L +R +D ++ YL     + RSR  C +    +I  ++ GW+ K
Sbjct: 1086 FSINMDRTDQDNLAAVLGVRRVDQHDVYLGLPTHVGRSRRQCFNSLKERIWKKIQGWKAK 1145

Query: 1640 LINQAGRAVQIQTTLSTSVQYQMGVFMLPDKTHKKINQIQRRYFW-NHK*NKGFNPKSWS 1816
            L++ AG+ + ++        Y M  F++P     +I Q+  RY+W      +  +  SW+
Sbjct: 1146 LLSFAGKEILLKVVAQAVPIYMMNCFLIPKCLCNEIQQVMARYWWVEQDGQRKIHWLSWN 1205

Query: 1817 SVCTSKRFGGLRFKDSKKFNIAMLTKLAWRLLTQPQKEWVKVLNAIHVKNKDPLVEDISR 1996
             +C  K+ GGL F++   FN+A+L K  WRL+  P      +L A + KN   L   I  
Sbjct: 1206 KLCLPKQEGGLGFRNLYAFNMALLAKQLWRLIQTPNSLVACILKARYFKNCSILEAQIGH 1265

Query: 1997 KNSSWVWQSIQHGL*VLKQY*IWEIGDG 2080
             + S++WQS+     ++++   W IG+G
Sbjct: 1266 -SPSYIWQSLCKARVLIEKGSRWRIGNG 1292



 Score = 56.6 bits (135), Expect(2) = 6e-30
 Identities = 42/189 (22%), Positives = 76/189 (40%), Gaps = 13/189 (6%)
 Frame = +3

Query: 2079 GSPIKALQHNWFPISYNSNTNARSSYLSNDTRVADLTDTEKKTWNIQLLSQYFNPDQIKE 2258
            G  ++     W P S +   ++       + +V  L +     W   LL  +F+ +++  
Sbjct: 1292 GHSVRIWGDRWLPNSESFQVSSPQVEGFEEAKVNSLINPVTLQWKEDLLQAWFSAEEVNC 1351

Query: 2259 IMTIKIPSKGE-DTLRWSLPYCGAFTTKYVYN------------ELSKNNAGISHLHQME 2399
            I  I +  +   D L W     G +T +  ++            + + N   I    Q+ 
Sbjct: 1352 IRNIPLSFRHPPDILIWHFERDGQYTVRSGHDVARRVLLQQDGDDTNMNGGPIVACEQV- 1410

Query: 2400 GKGWLKLWNMEVPHKIQMFL*KCCHDILPVKKKLFSKNNNMDQLCPLCLNSEETSTHLFL 2579
               W K+W   VP K+++F+ +   +ILP K  L  +  +  + C  C  +EET  H+ L
Sbjct: 1411 ---WKKIWKARVPPKVRIFIWRALLNILPTKDNLIHRRISELRGCVFC-GAEETVAHVLL 1466

Query: 2580 HCQFAEVIW 2606
             C  A   W
Sbjct: 1467 RCPMAIASW 1475


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  139 bits (351), Expect(2) = 1e-59
 Identities = 84/316 (26%), Positives = 162/316 (51%), Gaps = 8/316 (2%)
 Frame = +2

Query: 5    SEKHNFSTNSSPSFQIVHDTIDMHGLRDVPFTGNPFTWSNHRKSTKLVKTRIDRALANNN 184
            SEK      +S    I  + ++     D+ F G  FTW+N+R     ++ R+DR +AN+ 
Sbjct: 150  SEKKGGDGFNSREADIFRNAMEECHFMDLGFVGYEFTWTNNRGGDANIQERLDRFVANDL 209

Query: 185  WFTSFKDSVINNLLPHGSDHAPIPLHIHLPDKT-----NNKPYRFYKVWLSNPLCKEVLR 349
            W   F  S +++L    SDH PI   +            +K +RF  +WL      EV++
Sbjct: 210  WKIKFPGSFVSHLPKRKSDHVPIVASVKGAQSAATRTKKSKRFRFEAMWLREGESDEVVK 269

Query: 350  KSCHLEESLHLNELPKKIQQTTEALRDWNHKSFGHVKTEIRRTQNLLQKAKNS-PRQDTT 526
            ++        +N     + +T   L  W+ + FGHV  EIR  Q+ ++    S P +D  
Sbjct: 270  ETWMRGTDAGIN-----LARTANKLLSWSKQKFGHVAKEIRMCQHQMKVLMESEPSEDNI 324

Query: 527  L-IKSLEDQLNKWYDKSAQITYHQ-SREQILWFDDRNNKYFHNKANFRRRRNHIDTLQDS 700
            + +++L+ ++++  +K  ++ +HQ SR+  +   D+N K+FH KA+ R +RN++  +++ 
Sbjct: 325  MHMRALDARMDE-LEKREEVYWHQRSRQDWIKSGDKNTKFFHQKASHREQRNNVRRIRNE 383

Query: 701  NGNWISNKEEI*KLLLKHFRDIYTSSNPTMDADLLNLIQPCVTEK*NQMLIKIPSSDEIK 880
             G W  +++++ +    +F +++ S N      +LN+++P +T++    L      +E+ 
Sbjct: 384  AGEWFEDEDDVTECFAHYFENLFQSGNNCEMDPILNIVKPQITDELGTQLDAPFRREEVS 443

Query: 881  EAMFQINPWGVPGPDG 928
             A+ Q++P   PGPDG
Sbjct: 444  AALAQMHPNKAPGPDG 459



 Score =  120 bits (300), Expect(2) = 1e-59
 Identities = 67/183 (36%), Positives = 93/183 (50%), Gaps = 31/183 (16%)
 Frame = +1

Query: 940  FYQQFWDIVETNIVSLVQNFFMTGQFPSQINHTFQVLIPKLGISTKPRDCRPISLCNITY 1119
            FYQ FWD +  ++ + V N          +N T  VLIPK      P D RPISLCN+ Y
Sbjct: 464  FYQHFWDTIGEDVTTKVLNMLNNVDNIGAVNQTHIVLIPKKKHCESPVDFRPISLCNVLY 523

Query: 1120 KLITK------------------------------ILVVQEMVHYM-KKTLFYTGVVGIK 1206
            K++ K                              +LV  E  H++ KK     G +G+K
Sbjct: 524  KIVAKVLANRMKMVLPMVIHESQSGFVPGRLITDNVLVAYECFHFLRKKKTGKKGYLGLK 583

Query: 1207 LDMEKTFDRMEWSFLHQILLHLGFSTKWCQLINYCVSTAFISMLLNGVPMEPIIPTRGLR 1386
            LDM K +DR+EW FL  ++L LGF T++ +L+  CV++A  S+L+NG P     P+RGLR
Sbjct: 584  LDMSKAYDRVEWCFLENMMLKLGFPTRYTKLVMNCVTSARFSVLVNGQPSRNFFPSRGLR 643

Query: 1387 QDD 1395
            Q D
Sbjct: 644  QGD 646



 Score = 89.4 bits (220), Expect(2) = 2e-30
 Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 1/209 (0%)
 Frame = +2

Query: 1460 FSKHMNRDSCEEVTRKLQMRELDLNEKYLVTNFIIPRSRDNCLDPSINKI*NRLPGWQGK 1639
            +S+++  D    +  KL  + ++ +EKYL     I  S+        +++  +L GW+GK
Sbjct: 732  YSRNLEPDKINTLQMKLAFKTVEGHEKYLGLPTFIGSSKKRVFQAIQDRVWKKLKGWKGK 791

Query: 1640 LINQAGRAVQIQTTLSTSVQYQMGVFMLPDKTHKKINQIQRRYFWNHK-*NKGFNPKSWS 1816
             ++QAGR V I+        Y M  F++P      I ++ R +FW  K   +     +W 
Sbjct: 792  YLSQAGREVLIKAVAQAIPTYAMQCFVIPKSIIDGIEKMCRNFFWGQKEEERRVAWVAWE 851

Query: 1817 SVCTSKRFGGLRFKDSKKFNIAMLTKLAWRLLTQPQKEWVKVLNAIHVKNKDPLVEDISR 1996
             +   K+ GGL  ++   FN A+L K AWR+LT+P     +V+   +    + L   +S 
Sbjct: 852  KLFLPKKEGGLGIRNFDVFNRALLAKQAWRILTKPDSLMARVIKGKYFPRSNFLEARVS- 910

Query: 1997 KNSSWVWQSIQHGL*VLKQY*IWEIGDGK 2083
             N S+  +SI     V+++     IGDG+
Sbjct: 911  PNMSFTCKSILSARAVIQKGMCRVIGDGR 939



 Score = 72.8 bits (177), Expect(2) = 2e-30
 Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 3/148 (2%)
 Frame = +3

Query: 2172 RVADLTDTEKKTWNIQLLSQYFNPDQIKEIMTIKIP-SKGEDTLRWSLPYCGAFTTK--Y 2342
            +V +L   ++  WN++LL+  F P +   I  I +   K  D   W +   G FT +  Y
Sbjct: 971  KVCELISNDR--WNVELLNTLFQPWESTAIQRIPVALQKKPDQWMWMMSKNGQFTVRSAY 1028

Query: 2343 VYNELSKNNAGISHLHQMEGKGWLKLWNMEVPHKIQMFL*KCCHDILPVKKKLFSKNNNM 2522
             +  L     G S       K W K+W  ++P K+++F  K  H+ L V   +  +  N+
Sbjct: 1029 YHELLEDRKTGPSTSRGPNLKLWQKIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNI 1088

Query: 2523 DQLCPLCLNSEETSTHLFLHCQFAEVIW 2606
            D  CP C   EET+ HL   C  +   W
Sbjct: 1089 DGACPRCGEKEETTEHLIWGCDESSRAW 1116


>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
           gi|7267666|emb|CAB78094.1| RNA-directed DNA
           polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score =  135 bits (341), Expect(2) = 3e-58
 Identities = 89/308 (28%), Positives = 145/308 (47%)
 Frame = +2

Query: 5   SEKHNFSTNSSPSFQIVHDTIDMHGLRDVPFTGNPFTWSNHRKSTKLVKTRIDRALANNN 184
           SEK          F      +  +GL D+  TGN  +W   R S   +K+R+DRAL N +
Sbjct: 88  SEKQGGPLRWEGFFLAFRSFVSQNGLWDINHTGNSLSWRGTRYS-HFIKSRLDRALGNCS 146

Query: 185 WFTSFKDSVINNLLPHGSDHAPIPLHIHLPDKTNNKPYRFYKVWLSNPLCKEVLRKSCHL 364
           W   F  S    L   GSDH P+  +   P    +KP+RF +        + ++++   L
Sbjct: 147 WSELFPMSKCEYLRFEGSDHRPLVTYFGAPPLKRSKPFRFDRRLREKEEIRALVKEVWEL 206

Query: 365 EESLHLNELPKKIQQTTEALRDWNHKSFGHVKTEIRRTQNLLQKAKNSPRQDTTLIKSLE 544
                 + +  KI +  +++  W  +   +    I++ Q  L+ A ++   D +LI S+ 
Sbjct: 207 ARQ---DSVLYKISRCRQSIIKWTKEQNSNSAKAIKKAQQALESALSADIPDPSLIGSIT 263

Query: 545 DQLNKWYDKSAQITYHQSREQILWFDDRNNKYFHNKANFRRRRNHIDTLQDSNGNWISNK 724
            +L   Y +        SR Q L   DRN  YFH     RR  N++  ++D +G     +
Sbjct: 264 QELEAAYRQEELFWKQWSRVQWLNSGDRNKGYFHATTRTRRMLNNLSVIEDGSGQEFHEE 323

Query: 725 EEI*KLLLKHFRDIYTSSNPTMDADLLNLIQPCVTEK*NQMLIKIPSSDEIKEAMFQINP 904
           E+I   +  +F++I+T+SN +    +   + P ++   N+ LIKI S  EIKEA+F I+ 
Sbjct: 324 EQIASTISSYFQNIFTTSNNSDLQVVQEALSPIISSHCNEELIKISSLLEIKEALFSISA 383

Query: 905 WGVPGPDG 928
              PGPDG
Sbjct: 384 DKAPGPDG 391



 Score =  119 bits (298), Expect(2) = 3e-58
 Identities = 60/187 (32%), Positives = 99/187 (52%), Gaps = 32/187 (17%)
 Frame = +1

Query: 931  TSGFYQQFWDIVETNIVSLVQNFFMTGQFPSQINHTFQVLIPKLGISTKPRDCRPISLCN 1110
            ++ F+  +WDI+E ++   +++FF+      ++N T   LIPK+    K  D RPI+LCN
Sbjct: 393  SASFFHAYWDIIEADVSRDIRSFFVDSCLSPRLNETHVTLIPKISAPRKVSDYRPIALCN 452

Query: 1111 ITYKLITKIL------------------------------VVQEMVHYMKKT--LFYTGV 1194
            + YK++ KIL                              +  E++H+++ +    Y  +
Sbjct: 453  VQYKIVAKILTRRLQPWLSELISLHQSAFVPGRAIADNVLITHEILHFLRVSGAKKYCSM 512

Query: 1195 VGIKLDMEKTFDRMEWSFLHQILLHLGFSTKWCQLINYCVSTAFISMLLNGVPMEPIIPT 1374
              IK DM K +DR++W+FL ++L+ LGF  KW + +  CV T   S L+NG P   ++P+
Sbjct: 513  A-IKTDMSKAYDRIKWNFLQEVLMRLGFHDKWIRWVMQCVCTVSYSFLINGSPQGSVVPS 571

Query: 1375 RGLRQDD 1395
            RGLRQ D
Sbjct: 572  RGLRQGD 578



 Score = 63.5 bits (153), Expect(2) = 1e-19
 Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 3/179 (1%)
 Frame = +3

Query: 2079 GSPIKALQHNWFPISYNSNTNARSSYLSNDTRVADLTDTEKKTWNIQLLSQYFNP--DQI 2252
            G  I      W   S         +  + D  V DL   + K+WN++ + ++     DQI
Sbjct: 864  GDSINVWTEAWLSPSSPQTPIGPPTETNKDLSVHDLICHDVKSWNVEAIRKHLPQYEDQI 923

Query: 2253 KEIMTIKIPSKGEDTLRWSLPYCGAFTTKYVYNELSKNNAGISHLHQMEGKGWLK-LWNM 2429
            ++I    +P   +D+L W     G +TTK  Y     N+   S L       W K +W +
Sbjct: 924  RKITINALPL--QDSLVWLPVKSGEYTTKTGYALAKLNSFPASQLDF----NWQKNIWKI 977

Query: 2430 EVPHKIQMFL*KCCHDILPVKKKLFSKNNNMDQLCPLCLNSEETSTHLFLHCQFAEVIW 2606
                K++ FL K     LPV + L  +N   +  C  C    E+S HL L C +A+ +W
Sbjct: 978  HTSPKVKHFLWKAMKGALPVGEALSRRNIEAEVTCKRC-GQTESSLHLMLLCPYAKKVW 1035



 Score = 62.4 bits (150), Expect(2) = 1e-19
 Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 1/182 (0%)
 Frame = +2

Query: 1538 KYLVTNFIIPRSRDNCLDPSINKI*NRLPGWQGKLINQAGRAVQIQTTLSTSVQYQMGVF 1717
            KYL       R + +     +++I  R   W  + ++ AG+ + ++  LS+   Y M  F
Sbjct: 690  KYLGLPEHFGRRKRDIFSSIVDRIRQRSHSWSIRFLSSAGKQILLKAVLSSMPSYAMMCF 749

Query: 1718 MLPDKTHKKINQIQRRYFWNHK*NK-GFNPKSWSSVCTSKRFGGLRFKDSKKFNIAMLTK 1894
             LP    K+I  +  R++W+ K +K      SW  +      GGL F++ +        K
Sbjct: 750  KLPASLCKQIQSVLTRFWWDSKPDKRKMAWVSWDKLTLPINEGGLGFREIE-------AK 802

Query: 1895 LAWRLLTQPQKEWVKVLNAIHVKNKDPLVEDISRKNSSWVWQSIQHGL*VLKQY*IWEIG 2074
            L+WR+L +P     +VL   +      +    S   +S  W+ I  G  +L++   W IG
Sbjct: 803  LSWRILKEPHSLLSRVLLGKYCNTSSFMDCSASPSFASHGWRGILAGRDLLRKGLGWSIG 862

Query: 2075 DG 2080
             G
Sbjct: 863  QG 864


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  151 bits (381), Expect(2) = 6e-58
 Identities = 85/294 (28%), Positives = 154/294 (52%), Gaps = 4/294 (1%)
 Frame = +2

Query: 59   DTIDMHGLRDVPFTGNPFTWSNHRKSTKLVKTRIDRALANNNWFTSFKDSVINNLLPHGS 238
            + ID   ++D+ + GN FTW      + L++ R+DR LAN+ W  +F    + +L  + S
Sbjct: 163  EVIDDCAVKDLGYVGNRFTWQRGNSPSTLIRERLDRMLANDEWCDNFPSWEVVHLPRYRS 222

Query: 239  DHAPIPLHIHLPD--KTNNKPYRFYKVWLSNPLCKEVLRKSCHLEESLHLNELPKKIQQT 412
            DHAP+ L   + D  +  NK ++F  +WLS   C +++ ++ +        ++  ++ + 
Sbjct: 223  DHAPLLLKTGVNDSFRRGNKLFKFEAMWLSKEECGKIVEEAWNGSAG---EDITNRLDEV 279

Query: 413  TEALRDWNHKSFGHVKTEIRRTQNLLQKAKNSPRQDTTL--IKSLEDQLNKWYDKSAQIT 586
            + +L  W  K+FG++K   +    LL   +      +TL   + +   L++ +       
Sbjct: 280  SRSLSTWATKTFGNLKKRKKEALTLLNGLQQRDPDASTLEQCRIVSGDLDEIHRLEESYW 339

Query: 587  YHQSREQILWFDDRNNKYFHNKANFRRRRNHIDTLQDSNGNWISNKEEI*KLLLKHFRDI 766
            + ++R   +   D+N KYFH+KA+ R+RRN I+ L D NG W   +EEI  ++  +F  +
Sbjct: 340  HARARANEIRDGDKNTKYFHHKASQRKRRNTINELLDENGVWKKGREEICGVVQHYFEGL 399

Query: 767  YTSSNPTMDADLLNLIQPCVTEK*NQMLIKIPSSDEIKEAMFQINPWGVPGPDG 928
            + + +P      L  +  CV+   N  L+ +PS DE+KEA+F ++P   PG DG
Sbjct: 400  FATDSPVNMELALEGLSHCVSTDMNTALLMLPSGDEVKEALFAMHPNKAPGIDG 453



 Score =  103 bits (256), Expect(2) = 6e-58
 Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 31/185 (16%)
 Frame = +1

Query: 940  FYQQFWDIVETNIVSLVQNFFMTGQFPSQINHTFQVLIPKLGISTKPRDCRPISLCNITY 1119
            F+Q+FW I+ ++++S VQ+++        +N T  VLIPK       +D RPISLC + Y
Sbjct: 458  FFQKFWHILGSDVISFVQSWWRGMGDLGVVNKTCIVLIPKCDHPQSMKDFRPISLCTVLY 517

Query: 1120 KLITKIL------------------------------VVQEMVHYMK-KTLFYTGVVGIK 1206
            K+++K L                              V  E+ H MK K     GV  +K
Sbjct: 518  KILSKTLANRLKVILPAIISPNQSAFVPRRLITDNALVAFEIFHAMKRKDANKNGVCALK 577

Query: 1207 LDMEKTFDRMEWSFLHQILLHLGFSTKWCQLINYCVSTAFISMLLNGVPMEPIIPTRGLR 1386
            LDM K +DR+EW FL +++  +GF   W   +  C+S+   +  +NGV    + P+RGLR
Sbjct: 578  LDMSKAYDRVEWCFLERVMKKMGFCDGWIDRVMACISSVSFTFNVNGVVEGSLSPSRGLR 637

Query: 1387 QDDCI 1401
            Q D I
Sbjct: 638  QGDPI 642



 Score =  104 bits (259), Expect(2) = 7e-36
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 1/209 (0%)
 Frame = +2

Query: 1460 FSKHMNRDSCEEVTRKLQMRELDLNEKYLVTNFIIPRSRDNCLDPSINKI*NRLPGWQGK 1639
            FS+ ++R+    +   L ++E+D  EKYL    II RS+         +I  +L GW+ K
Sbjct: 726  FSRSVDRERRSAIVNVLGVKEVDRQEKYLGLPTIIGRSKKVTFACIKERIWKKLQGWKEK 785

Query: 1640 LINQAGRAVQIQTTLSTSVQYQMGVFMLPDKTHKKINQIQRRYFW-NHK*NKGFNPKSWS 1816
            L+++ G+ V I++       Y M VF LP     +I+ +  R++W +   N+  +  SW 
Sbjct: 786  LLSRPGKEVLIKSVAQAIPTYMMSVFSLPSGLIDEIHSLLARFWWGSSDTNRKMHWHSWD 845

Query: 1817 SVCTSKRFGGLRFKDSKKFNIAMLTKLAWRLLTQPQKEWVKVLNAIHVKNKDPLVEDISR 1996
            ++C  K  GGL F+D   FN ++L K AWRL T  Q    ++L A + K+ + L+E    
Sbjct: 846  TLCYPKSMGGLGFRDLHCFNQSLLAKQAWRLCTGDQTLLYRLLQARYFKSSE-LLEARRG 904

Query: 1997 KNSSWVWQSIQHGL*VLKQY*IWEIGDGK 2083
             N S+ W+SI     +L +   W +G G+
Sbjct: 905  YNPSFTWRSIWGSKSLLLEGLKWCVGSGE 933



 Score = 76.3 bits (186), Expect(2) = 7e-36
 Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 23/198 (11%)
 Frame = +3

Query: 2166 DTRVADLTDTEKKTWNIQLLSQYFNPDQIKEIMTIKIPSKGEDTLRWSLPYC-GAFTTKY 2342
            D +V DL D  +  WNI+ + Q F  ++ + +++I +     D  R+  P   G F+ + 
Sbjct: 961  DLKVCDLIDVARGAWNIESVQQTFVEEEWELVLSIPLSRFLPDDHRYWWPSRNGIFSVRS 1020

Query: 2343 VY--NELSKNNAGISHLHQMEGKGWLKLWNMEVPHKIQMFL*KCCHDILPVKKKLFSKNN 2516
             Y    L           + E + W ++W ++ P K+  FL + C   L VK +LFS++ 
Sbjct: 1021 CYWLGRLGPVRTWQLQHGERETELWRRVWQLQGPPKLSHFLWRACKGSLAVKGRLFSRHI 1080

Query: 2517 NMDQLCPLCLNSEETSTHLFLHCQFAEVIW-VGIYAALLQSLKEKIFV--IDWI------ 2669
            ++D  C +C + +E+  H    C FA  IW V  +A+L+ +     F   ++W+      
Sbjct: 1081 SVDATCSVCGDPDESINHALFDCTFARAIWQVSGFASLMMNAPLSSFSERLEWLAKHATK 1140

Query: 2670 -----------VSWFCNN 2690
                         WFC N
Sbjct: 1141 EEFRTMCSFMWAGWFCRN 1158


>ref|XP_007224193.1| hypothetical protein PRUPE_ppa017155mg, partial [Prunus persica]
           gi|462421129|gb|EMJ25392.1| hypothetical protein
           PRUPE_ppa017155mg, partial [Prunus persica]
          Length = 916

 Score =  137 bits (344), Expect(2) = 1e-57
 Identities = 87/296 (29%), Positives = 159/296 (53%), Gaps = 9/296 (3%)
 Frame = +2

Query: 65  IDMHGLRDVPFTGNPFTWSNHRKSTKLVKTRIDRALANNNWFTSFKDSVINNLLPHGSDH 244
           ID  G +D+ +TG  +TW   R +   ++ R+DR LA  +W + F  + + +L P  SDH
Sbjct: 42  IDTCGFKDMGYTGPKYTW--WRNNPMEIRIRLDRVLATADWCSRFLGTKVIHLNPTKSDH 99

Query: 245 APIPLHIH---LPDKTNNKPYRFYKVWLSNPLCKEVLR----KSCHLEESLHLNELPKKI 403
            P+ + I    L +    K +RF ++W  +  C + ++    ++C         E   K+
Sbjct: 100 LPLKVTISERMLLNGRRKKLFRFEEMWAEHVNCMQTIQDGWQRTCRGSAPFTTTE---KL 156

Query: 404 QQTTEALRDWNHKSFGHVKTEIRRTQNLLQKAKNSPRQDTT--LIKSLEDQLNKWYDKSA 577
           + T   L  W+  +FGH+  +I+ T+  L +  ++P    T  L  +L  QL+    K+ 
Sbjct: 157 KCTRHQLLGWSKCNFGHLPNQIKITREKLGELLDAPPSHHTVELRNALTKQLDSLMAKNE 216

Query: 578 QITYHQSREQILWFDDRNNKYFHNKANFRRRRNHIDTLQDSNGNWISNKEEI*KLLLKHF 757
                +SR   L   DRN+K+FH KA+  RRRN I  L+D +G+W + ++ + + ++ +F
Sbjct: 217 VYWRQRSRATWLKAGDRNSKFFHYKASSCRRRNTISALEDEHGHWQTTEQGLTQTVVNYF 276

Query: 758 RDIYTSSNPTMDADLLNLIQPCVTEK*NQMLIKIPSSDEIKEAMFQINPWGVPGPD 925
           + +++S   +   ++++ ++  VTE+ NQ L+   + +EIK A+FQ++P   PGPD
Sbjct: 277 QHLFSSIGSSDYTEVVDGVRGRVTEEMNQALLAEFTPEEIKIALFQMHPSKAPGPD 332



 Score =  116 bits (291), Expect(2) = 1e-57
 Identities = 68/183 (37%), Positives = 96/183 (52%), Gaps = 31/183 (16%)
 Frame = +1

Query: 940  FYQQFWDIVETNIVSLVQNFFMTGQFPSQINHTFQVLIPKLGISTKPRDCRPISLCNITY 1119
            FYQ++W IV  ++V+ V +FF TG+   +IN T   LIPK+         RPISLCN+  
Sbjct: 338  FYQKYWQIVGEDMVAAVLHFFKTGKLLKKINFTHVALIPKVHEPKNMTQLRPISLCNVFN 397

Query: 1120 KLITKIL------------------------------VVQEMVHYM-KKTLFYTGVVGIK 1206
            K+  K+L                              V  E++H M KK     G + +K
Sbjct: 398  KIGAKVLATHLKAILPTLISDTQSAFAPDRAISDNSIVAFELLHMMHKKNHGRQGYLALK 457

Query: 1207 LDMEKTFDRMEWSFLHQILLHLGFSTKWCQLINYCVSTAFISMLLNGVPMEPIIPTRGLR 1386
            +DM K +DR+EWSFL  ++  +GF+ +W QLI   V+T   S +LNG P+  +IP RGLR
Sbjct: 458  IDMSKAYDRVEWSFLEALMKGMGFAPRWIQLIMEYVTTVSYSFMLNGNPVGYVIPQRGLR 517

Query: 1387 QDD 1395
            Q D
Sbjct: 518  QGD 520



 Score = 91.7 bits (226), Expect(2) = 3e-24
 Identities = 49/171 (28%), Positives = 88/171 (51%), Gaps = 1/171 (0%)
 Frame = +2

Query: 1571 SRDNCLDPSINKI*NRLPGWQGKLINQAGRAVQIQTTLSTSVQYQMGVFMLPDKTHKKIN 1750
            SR  C +    +I  ++ GW+ KL++ AG+ + ++        Y M  F++P     +I 
Sbjct: 573  SRRQCFNSLKERIWKKIQGWKAKLLSVAGKEILLKVVAQAVPIYMMNCFLIPKCLCDEIQ 632

Query: 1751 QIQRRYFWNHK*N-KGFNPKSWSSVCTSKRFGGLRFKDSKKFNIAMLTKLAWRLLTQPQK 1927
            Q+  RY+W  +   +  +  SW+ +C  K+ GGL F++   FN+ +L K  WRL+  P  
Sbjct: 633  QVMARYWWGEQDGQRKIHWLSWNKLCLPKQEGGLGFRNLYAFNMVLLAKQLWRLIQTPNS 692

Query: 1928 EWVKVLNAIHVKNKDPLVEDISRKNSSWVWQSIQHGL*VLKQY*IWEIGDG 2080
               ++L A + KN   L   I   + S++WQS+     ++++   W IG+G
Sbjct: 693  LVARILKARYFKNCSILEAQIGH-SPSYIWQSLCKARVLIEKGSRWRIGNG 742



 Score = 50.1 bits (118), Expect(2) = 3e-24
 Identities = 41/181 (22%), Positives = 76/181 (41%), Gaps = 14/181 (7%)
 Frame = +3

Query: 2079 GSPIKALQHNWFPISYNSNTNARSSYLSNDTRVADLTDTEKKTWNIQLLSQYFNPDQIKE 2258
            G  ++     W P S +   ++  +   ++ +V  L +     W   LL  +F+ +++  
Sbjct: 742  GHSVRIWGDRWLPNSESFQVSSPQTEGFDEAKVNSLINPVTMQWKEDLLQAWFSAEEVNC 801

Query: 2259 IMTIKIPSK-GEDTLRWSLPYCGAFTTKYVYNELSK-------------NNAGISHLHQM 2396
            I  I +  +   D L W     G +T  +  NE+++             N   I    Q+
Sbjct: 802  IRNIPLSFRYPPDILIWHFERDGQYTV-WSGNEVARRVLLQQDGDDTNMNGGPIVACEQV 860

Query: 2397 EGKGWLKLWNMEVPHKIQMFL*KCCHDILPVKKKLFSKNNNMDQLCPLCLNSEETSTHLF 2576
                W K+W   VP K+++F+ +   +ILP K  L  ++ +    C  C  +EET  H+ 
Sbjct: 861  ----WKKIWKARVPPKVRIFIWRALLNILPTKDNLIHRSISELGGCVFC-GAEETVVHVL 915

Query: 2577 L 2579
            L
Sbjct: 916  L 916


>gb|AAQ19327.1| bZIP-like protein [Oryza sativa Japonica Group]
          Length = 2367

 Score =  144 bits (363), Expect(2) = 3e-57
 Identities = 89/310 (28%), Positives = 158/310 (50%), Gaps = 3/310 (0%)
 Frame = +2

Query: 8    EKHNFSTNSSPSFQIVHDTIDMHGLRDVPFTGNPFTWSNHRKSTKLVKTRIDRALANNNW 187
            E  + +    P  Q   D +    L D+ F G P T+ N R+  + VK R+DR +A++ W
Sbjct: 876  EHFSRTPRGEPQMQDFRDVLQDCELHDLGFKGVPHTYDNKREGWRNVKVRLDRVVADDKW 935

Query: 188  FTSFKDSVINNLLPHGSDHAPIPLHIHL--PDKTNNKPYRFYKVWLSNPLCKEVLRKSCH 361
               +  + + +L+   SDH PI L++ +  P +   K   +  VW   P   +V+ ++  
Sbjct: 936  RDIYSTAQVVHLVSPCSDHCPILLNLVVKDPHQLRQKCLHYEIVWEREPEATQVIEEAWV 995

Query: 362  LE-ESLHLNELPKKIQQTTEALRDWNHKSFGHVKTEIRRTQNLLQKAKNSPRQDTTLIKS 538
            +  E   L ++ K + +   ALR W+     +V  E+ + +  L +   S   D T+I++
Sbjct: 996  VAGEKADLGDINKALAKVMTALRSWSRAKVKNVGRELEKARKKLAELIES-NADRTVIRN 1054

Query: 539  LEDQLNKWYDKSAQITYHQSREQILWFDDRNNKYFHNKANFRRRRNHIDTLQDSNGNWIS 718
              D +N+   +   +   +SR   L  +DRN K+FH++A +R ++N I  L+D+N    S
Sbjct: 1055 ATDHMNELLYREEMLWLQRSRVNWLKDEDRNTKFFHSRAVWRAKKNKISKLRDANETVHS 1114

Query: 719  NKEEI*KLLLKHFRDIYTSSNPTMDADLLNLIQPCVTEK*NQMLIKIPSSDEIKEAMFQI 898
            +  ++  +  ++F+D+YT+        +  LIQ  VT+  N+ L +  + DEI +A+FQI
Sbjct: 1115 STMKLESMATEYFQDVYTADPNLNPETVTRLIQEKVTDIMNEKLCEDFTEDEISQAIFQI 1174

Query: 899  NPWGVPGPDG 928
             P   PGPDG
Sbjct: 1175 GPLKSPGPDG 1184



 Score =  107 bits (268), Expect(2) = 3e-57
 Identities = 62/186 (33%), Positives = 89/186 (47%), Gaps = 31/186 (16%)
 Frame = +1

Query: 940  FYQQFWDIVETNIVSLVQNFFMTGQFPSQINHTFQVLIPKLGISTKPRDCRPISLCNITY 1119
            FYQ+ W  ++ +I+  V+ FF TG  P  +N T  VLIPK       RD RPISLCN+ Y
Sbjct: 1189 FYQRNWGTIKADIIGAVRRFFQTGLMPEGVNDTAIVLIPKKEQPVDLRDFRPISLCNVVY 1248

Query: 1120 KLITKILVVQ------------------------------EMVHYMKKTLFYT-GVVGIK 1206
            K+++K LV +                              E  H M+K           K
Sbjct: 1249 KVVSKCLVNRLRPILDDLVSVEQSAFVQGRMITDNALLAFECFHAMQKNKKANHAACAYK 1308

Query: 1207 LDMEKTFDRMEWSFLHQILLHLGFSTKWCQLINYCVSTAFISMLLNGVPMEPIIPTRGLR 1386
            LD+ K +DR++W FL   +  LGF+ +W   I  CV++    +  NG  ++   PTRGLR
Sbjct: 1309 LDLSKAYDRVDWRFLEMAMNKLGFARRWVNWIMKCVTSVRYMVKFNGTLLQSFAPTRGLR 1368

Query: 1387 QDDCII 1404
            Q D ++
Sbjct: 1369 QGDPLL 1374



 Score = 92.8 bits (229), Expect(2) = 4e-27
 Identities = 51/160 (31%), Positives = 87/160 (54%), Gaps = 1/160 (0%)
 Frame = +2

Query: 1604 KI*NRLPGWQGKLINQAGRAVQIQTTLSTSVQYQMGVFMLPDKTHKKINQIQRRYFWNH- 1780
            KI  R+  W    ++  G+ V I+  +     Y MG+F LP+     + ++ + ++W+  
Sbjct: 1505 KIWKRVIQWGENHLSTGGKEVLIKAVIQAIPVYVMGIFKLPESVIDDLTKLTKNFWWDSM 1564

Query: 1781 K*NKGFNPKSWSSVCTSKRFGGLRFKDSKKFNIAMLTKLAWRLLTQPQKEWVKVLNAIHV 1960
               +  + K+W S+   K  GGL F+D + FN A+L + AWRL+T P     +VL A + 
Sbjct: 1565 NGQRKTHWKAWDSLTKPKSLGGLGFRDYRLFNQALLARQAWRLITYPDSLCARVLKAKYF 1624

Query: 1961 KNKDPLVEDISRKNSSWVWQSIQHGL*VLKQY*IWEIGDG 2080
             +   L++     NSS  W+SI++GL +LK+  IW +G+G
Sbjct: 1625 PH-GSLIDTSFGSNSSPAWRSIEYGLDLLKKGIIWRVGNG 1663



 Score = 58.5 bits (140), Expect(2) = 4e-27
 Identities = 42/189 (22%), Positives = 79/189 (41%), Gaps = 13/189 (6%)
 Frame = +3

Query: 2079 GSPIKALQHNWFPISYN-----SNTNARSSYLSNDTRVADLTDTEKKTWNIQLLSQYFNP 2243
            G+ I+  + +W P  ++        N R  ++S      DL  TE  +W++  + QYF+ 
Sbjct: 1663 GNSIRIWRDSWLPRDHSRRPITGKANCRLKWVS------DLI-TEDGSWDVPKIHQYFHN 1715

Query: 2244 DQIKEIMTIKIPSKGE-DTLRWSLPYCGAFTTKYVY-------NELSKNNAGISHLHQME 2399
               + I+ I I S+ E D + W     G F+ +  Y       N    +++G ++++   
Sbjct: 1716 LDAEVILNICISSRSEEDFIAWHPDKNGMFSVRSAYRLAAQLVNIEESSSSGTNNIN--- 1772

Query: 2400 GKGWLKLWNMEVPHKIQMFL*KCCHDILPVKKKLFSKNNNMDQLCPLCLNSEETSTHLFL 2579
             K W  +W  +VP K+++F  +   + L        +      +C +C    E   H   
Sbjct: 1773 -KAWEMIWKCKVPQKVKIFAWRVASNCLATMVNKKKRKLEQSDMCQICDRENEDDAHALC 1831

Query: 2580 HCQFAEVIW 2606
             C  A  +W
Sbjct: 1832 RCIQASQLW 1840


>gb|EEC68887.1| hypothetical protein OsI_37529 [Oryza sativa Indica Group]
          Length = 1765

 Score =  144 bits (363), Expect(2) = 3e-57
 Identities = 89/310 (28%), Positives = 158/310 (50%), Gaps = 3/310 (0%)
 Frame = +2

Query: 8    EKHNFSTNSSPSFQIVHDTIDMHGLRDVPFTGNPFTWSNHRKSTKLVKTRIDRALANNNW 187
            E  + +    P  Q   D +    L D+ F G P T+ N R+  + VK R+DR +A++ W
Sbjct: 617  EHFSRTPRGEPQMQDFRDVLQDCELHDLGFKGVPHTYDNKREGWRNVKVRLDRVVADDKW 676

Query: 188  FTSFKDSVINNLLPHGSDHAPIPLHIHL--PDKTNNKPYRFYKVWLSNPLCKEVLRKSCH 361
               +  + + +L+   SDH PI L++ +  P +   K   +  VW   P   +V+ ++  
Sbjct: 677  RDIYSTAQVVHLVSPCSDHCPILLNLVVKDPHQLRQKCLHYEIVWEREPEATQVIEEAWV 736

Query: 362  LE-ESLHLNELPKKIQQTTEALRDWNHKSFGHVKTEIRRTQNLLQKAKNSPRQDTTLIKS 538
            +  E   L ++ K + +   ALR W+     +V  E+ + +  L +   S   D T+I++
Sbjct: 737  VAGEKADLGDINKALAKVMTALRSWSRAKVKNVGRELEKARKKLAELIES-NADRTVIRN 795

Query: 539  LEDQLNKWYDKSAQITYHQSREQILWFDDRNNKYFHNKANFRRRRNHIDTLQDSNGNWIS 718
              D +N+   +   +   +SR   L  +DRN K+FH++A +R ++N I  L+D+N    S
Sbjct: 796  ATDHMNELLYREEMLWLQRSRVNWLKDEDRNTKFFHSRAVWRAKKNKISKLRDANETVHS 855

Query: 719  NKEEI*KLLLKHFRDIYTSSNPTMDADLLNLIQPCVTEK*NQMLIKIPSSDEIKEAMFQI 898
            +  ++  +  ++F+D+YT+        +  LIQ  VT+  N+ L +  + DEI +A+FQI
Sbjct: 856  STMKLESMATEYFQDVYTADPNLNPETVTRLIQEKVTDIMNEKLCEDFTEDEISQAIFQI 915

Query: 899  NPWGVPGPDG 928
             P   PGPDG
Sbjct: 916  GPLKSPGPDG 925



 Score =  107 bits (268), Expect(2) = 3e-57
 Identities = 62/186 (33%), Positives = 89/186 (47%), Gaps = 31/186 (16%)
 Frame = +1

Query: 940  FYQQFWDIVETNIVSLVQNFFMTGQFPSQINHTFQVLIPKLGISTKPRDCRPISLCNITY 1119
            FYQ+ W  ++ +I+  V+ FF TG  P  +N T  VLIPK       RD RPISLCN+ Y
Sbjct: 930  FYQRNWGTIKADIIGAVRRFFQTGLMPEGVNDTAIVLIPKKEQPVDLRDFRPISLCNVVY 989

Query: 1120 KLITKILVVQ------------------------------EMVHYMKKTLFYT-GVVGIK 1206
            K+++K LV +                              E  H M+K           K
Sbjct: 990  KVVSKCLVNRLRPILDDLVSVEQSAFVQGRMITDNALLAFECFHAMQKNKKANHAACAYK 1049

Query: 1207 LDMEKTFDRMEWSFLHQILLHLGFSTKWCQLINYCVSTAFISMLLNGVPMEPIIPTRGLR 1386
            LD+ K +DR++W FL   +  LGF+ +W   I  CV++    +  NG  ++   PTRGLR
Sbjct: 1050 LDLSKAYDRVDWRFLEMAMNKLGFARRWVNWIMKCVTSVRYMVKFNGTLLQSFAPTRGLR 1109

Query: 1387 QDDCII 1404
            Q D ++
Sbjct: 1110 QGDPLL 1115



 Score = 96.7 bits (239), Expect(2) = 2e-24
 Identities = 55/175 (31%), Positives = 91/175 (52%), Gaps = 1/175 (0%)
 Frame = +2

Query: 1559 IIPRSRDNCLDPSINKI*NRLPGWQGKLINQAGRAVQIQTTLSTSVQYQMGVFMLPDKTH 1738
            I P  RD        KI  R+  W    ++  G+ V I+  +     Y MG+F LP+   
Sbjct: 1213 IFPVERDRTFQSLQAKIWKRVIQWGENHLSTGGKEVLIKAVIQAIPVYVMGIFKLPESVI 1272

Query: 1739 KKINQIQRRYFWNH-K*NKGFNPKSWSSVCTSKRFGGLRFKDSKKFNIAMLTKLAWRLLT 1915
              + ++ + ++W+     +  + K+W S+   K  GGL F+D + FN A+L + AWRL+T
Sbjct: 1273 DDLTKLTKNFWWDSMNGQRKTHWKAWDSLTKPKSLGGLGFRDYRLFNQALLARQAWRLIT 1332

Query: 1916 QPQKEWVKVLNAIHVKNKDPLVEDISRKNSSWVWQSIQHGL*VLKQY*IWEIGDG 2080
             P     +VL A +  +   L++     NSS  W+SI++GL +LK+  IW +G+G
Sbjct: 1333 YPDSLCARVLKAKYFPH-GSLIDTSFGSNSSPAWRSIEYGLDLLKKGIIWRVGNG 1386



 Score = 45.4 bits (106), Expect(2) = 2e-24
 Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 13/139 (9%)
 Frame = +3

Query: 2079 GSPIKALQHNWFPISYN-----SNTNARSSYLSNDTRVADLTDTEKKTWNIQLLSQYFNP 2243
            G+ I+  + +W P  ++        N R  ++S      DL  TE  +W++  + QYF+ 
Sbjct: 1386 GNSIRIWRDSWLPRDHSRRPITGKANCRLKWVS------DLI-TEDGSWDVPKIHQYFHN 1438

Query: 2244 DQIKEIMTIKIPSKG-EDTLRWSLPYCGAFTTKYVY-------NELSKNNAGISHLHQME 2399
               + I+ I I S+  ED + W     G F+ +  Y       N    +++G ++++   
Sbjct: 1439 LDAEVILNICISSRSEEDFIAWHPDKNGMFSVRSAYRLAAQLVNIEESSSSGTNNIN--- 1495

Query: 2400 GKGWLKLWNMEVPHKIQMF 2456
             K W  +W  +VP K+++F
Sbjct: 1496 -KAWEMIWKCKVPQKVKIF 1513


>ref|NP_001066197.2| Os12g0156200 [Oryza sativa Japonica Group]
            gi|108862221|gb|ABA96496.2| retrotransposon protein,
            putative, unclassified, expressed [Oryza sativa Japonica
            Group] gi|255670064|dbj|BAF29216.2| Os12g0156200 [Oryza
            sativa Japonica Group]
          Length = 1764

 Score =  144 bits (363), Expect(2) = 3e-57
 Identities = 89/310 (28%), Positives = 158/310 (50%), Gaps = 3/310 (0%)
 Frame = +2

Query: 8    EKHNFSTNSSPSFQIVHDTIDMHGLRDVPFTGNPFTWSNHRKSTKLVKTRIDRALANNNW 187
            E  + +    P  Q   D +    L D+ F G P T+ N R+  + VK R+DR +A++ W
Sbjct: 273  EHFSRTPRGEPQMQDFRDVLQDCELHDLGFKGVPHTYDNKREGWRNVKVRLDRVVADDKW 332

Query: 188  FTSFKDSVINNLLPHGSDHAPIPLHIHL--PDKTNNKPYRFYKVWLSNPLCKEVLRKSCH 361
               +  + + +L+   SDH PI L++ +  P +   K   +  VW   P   +V+ ++  
Sbjct: 333  RDIYSTAQVVHLVSPCSDHCPILLNLVVKDPHQLRQKCLHYEIVWEREPEATQVIEEAWV 392

Query: 362  LE-ESLHLNELPKKIQQTTEALRDWNHKSFGHVKTEIRRTQNLLQKAKNSPRQDTTLIKS 538
            +  E   L ++ K + +   ALR W+     +V  E+ + +  L +   S   D T+I++
Sbjct: 393  VAGEKADLGDINKALAKVMTALRSWSRAKVKNVGRELEKARKKLAELIES-NADRTVIRN 451

Query: 539  LEDQLNKWYDKSAQITYHQSREQILWFDDRNNKYFHNKANFRRRRNHIDTLQDSNGNWIS 718
              D +N+   +   +   +SR   L  +DRN K+FH++A +R ++N I  L+D+N    S
Sbjct: 452  ATDHMNELLYREEMLWLQRSRVNWLKDEDRNTKFFHSRAVWRAKKNKISKLRDANETVHS 511

Query: 719  NKEEI*KLLLKHFRDIYTSSNPTMDADLLNLIQPCVTEK*NQMLIKIPSSDEIKEAMFQI 898
            +  ++  +  ++F+D+YT+        +  LIQ  VT+  N+ L +  + DEI +A+FQI
Sbjct: 512  STMKLESMATEYFQDVYTADPNLNPETVTRLIQEKVTDIMNEKLCEDFTEDEISQAIFQI 571

Query: 899  NPWGVPGPDG 928
             P   PGPDG
Sbjct: 572  GPLKSPGPDG 581



 Score =  107 bits (268), Expect(2) = 3e-57
 Identities = 62/186 (33%), Positives = 89/186 (47%), Gaps = 31/186 (16%)
 Frame = +1

Query: 940  FYQQFWDIVETNIVSLVQNFFMTGQFPSQINHTFQVLIPKLGISTKPRDCRPISLCNITY 1119
            FYQ+ W  ++ +I+  V+ FF TG  P  +N T  VLIPK       RD RPISLCN+ Y
Sbjct: 586  FYQRNWGTIKADIIGAVRRFFQTGLMPEGVNDTAIVLIPKKEQPVDLRDFRPISLCNVVY 645

Query: 1120 KLITKILVVQ------------------------------EMVHYMKKTLFYT-GVVGIK 1206
            K+++K LV +                              E  H M+K           K
Sbjct: 646  KVVSKCLVNRLRPILDDLVSVEQSAFVQGRMITDNALLAFECFHAMQKNKKANHAACAYK 705

Query: 1207 LDMEKTFDRMEWSFLHQILLHLGFSTKWCQLINYCVSTAFISMLLNGVPMEPIIPTRGLR 1386
            LD+ K +DR++W FL   +  LGF+ +W   I  CV++    +  NG  ++   PTRGLR
Sbjct: 706  LDLSKAYDRVDWRFLEMAMNKLGFARRWVNWIMKCVTSVRYMVKFNGTLLQSFAPTRGLR 765

Query: 1387 QDDCII 1404
            Q D ++
Sbjct: 766  QGDPLL 771



 Score = 92.8 bits (229), Expect(2) = 4e-27
 Identities = 51/160 (31%), Positives = 87/160 (54%), Gaps = 1/160 (0%)
 Frame = +2

Query: 1604 KI*NRLPGWQGKLINQAGRAVQIQTTLSTSVQYQMGVFMLPDKTHKKINQIQRRYFWNH- 1780
            KI  R+  W    ++  G+ V I+  +     Y MG+F LP+     + ++ + ++W+  
Sbjct: 902  KIWKRVIQWGENHLSTGGKEVLIKAVIQAIPVYVMGIFKLPESVIDDLTKLTKNFWWDSM 961

Query: 1781 K*NKGFNPKSWSSVCTSKRFGGLRFKDSKKFNIAMLTKLAWRLLTQPQKEWVKVLNAIHV 1960
               +  + K+W S+   K  GGL F+D + FN A+L + AWRL+T P     +VL A + 
Sbjct: 962  NGQRKTHWKAWDSLTKPKSLGGLGFRDYRLFNQALLARQAWRLITYPDSLCARVLKAKYF 1021

Query: 1961 KNKDPLVEDISRKNSSWVWQSIQHGL*VLKQY*IWEIGDG 2080
             +   L++     NSS  W+SI++GL +LK+  IW +G+G
Sbjct: 1022 PH-GSLIDTSFGSNSSPAWRSIEYGLDLLKKGIIWRVGNG 1060



 Score = 58.5 bits (140), Expect(2) = 4e-27
 Identities = 42/189 (22%), Positives = 79/189 (41%), Gaps = 13/189 (6%)
 Frame = +3

Query: 2079 GSPIKALQHNWFPISYN-----SNTNARSSYLSNDTRVADLTDTEKKTWNIQLLSQYFNP 2243
            G+ I+  + +W P  ++        N R  ++S      DL  TE  +W++  + QYF+ 
Sbjct: 1060 GNSIRIWRDSWLPRDHSRRPITGKANCRLKWVS------DLI-TEDGSWDVPKIHQYFHN 1112

Query: 2244 DQIKEIMTIKIPSKGE-DTLRWSLPYCGAFTTKYVY-------NELSKNNAGISHLHQME 2399
               + I+ I I S+ E D + W     G F+ +  Y       N    +++G ++++   
Sbjct: 1113 LDAEVILNICISSRSEEDFIAWHPDKNGMFSVRSAYRLAAQLVNIEESSSSGTNNIN--- 1169

Query: 2400 GKGWLKLWNMEVPHKIQMFL*KCCHDILPVKKKLFSKNNNMDQLCPLCLNSEETSTHLFL 2579
             K W  +W  +VP K+++F  +   + L        +      +C +C    E   H   
Sbjct: 1170 -KAWEMIWKCKVPQKVKIFAWRVASNCLATMVNKKKRKLEQSDMCQICDRENEDDAHALC 1228

Query: 2580 HCQFAEVIW 2606
             C  A  +W
Sbjct: 1229 RCIQASQLW 1237


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  130 bits (326), Expect(2) = 1e-56
 Identities = 79/294 (26%), Positives = 143/294 (48%), Gaps = 10/294 (3%)
 Frame = +2

Query: 77   GLRDVPFTGNPFTWSNHRKSTK-LVKTRIDRALANNNWFTSFKDSVINNLLPHGSDHAPI 253
            GL D+ F G+ FTW NH  S +  ++ R+DRA+AN  W   F  + + N  P  SDH P+
Sbjct: 415  GLDDLGFEGDAFTWRNHSHSQEGYIRERLDRAVANPEWRAMFPAARVINGDPRHSDHRPV 474

Query: 254  PLHIHLPDK-----TNNKPYRFYKVWLSNPLCKEVLRKSCHLEESLHLNELPKKIQQTTE 418
             + +   +K       +  +RF   WL     KEV++++  +   L    +   +     
Sbjct: 475  IIELEGKNKGVRGRNGHNDFRFEAAWLEEEKFKEVVKEAWDVSAGLQGLPVHASLAGVAA 534

Query: 419  ALRDWNHKSFGHVKTEIRRTQNLLQKAKNSPRQDTTLIKSLEDQLNKWYDKSAQIT--YH 592
             L  W+    G ++  +++ +  L+  +  P     +++  E+ L    +K  Q    Y 
Sbjct: 535  GLSSWSSNVLGDLEKRVKKVKKELETCRRQPISRDQVVR--EEVLRYRLEKLEQQVDIYW 592

Query: 593  QSREQILWFD--DRNNKYFHNKANFRRRRNHIDTLQDSNGNWISNKEEI*KLLLKHFRDI 766
            + R    W +  DRN  +FH   + RRRRN I+ L+  +G+W+  +E+   ++++ F+ +
Sbjct: 593  KQRAHTNWLNKGDRNTSFFHASCSERRRRNRINKLRREDGSWVEREEDKRAMIIEFFKQL 652

Query: 767  YTSSNPTMDADLLNLIQPCVTEK*NQMLIKIPSSDEIKEAMFQINPWGVPGPDG 928
            +TS+       LL+++   V+   N+ L    + +E+KEA+  I     PGPDG
Sbjct: 653  FTSNGGQNSQKLLDVVDRKVSGAMNESLRAEFTREEVKEALDAIGDLKAPGPDG 706



 Score =  120 bits (300), Expect(2) = 1e-56
 Identities = 71/185 (38%), Positives = 88/185 (47%), Gaps = 31/185 (16%)
 Frame = +1

Query: 934  SGFYQQFWDIVETNIVSLVQNFFMTGQFPSQINHTFQVLIPKLGISTKPRDCRPISLCNI 1113
            +GFY+  WD+V   +   V      G  P   N    VLIPK+      +D RPISLCN+
Sbjct: 709  AGFYKACWDVVGEKVTDEVLEVLRGGAIPEGWNDITIVLIPKVKKPELIKDLRPISLCNV 768

Query: 1114 TYKLITK------------------------------ILVVQEMVHYMK-KTLFYTGVVG 1200
             YKL++K                              IL+  EM HYM+ K     G   
Sbjct: 769  CYKLVSKVLANRLKKILPDVISPAQSAFVPGRLISDNILIADEMTHYMRNKRSGQVGYAA 828

Query: 1201 IKLDMEKTFDRMEWSFLHQILLHLGFSTKWCQLINYCVSTAFISMLLNGVPMEPIIPTRG 1380
             KLDM K +DR+EWSFLH ++L LGF T W  LI  CVST    + +NG   E   P RG
Sbjct: 829  FKLDMSKAYDRVEWSFLHDMILKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPGRG 888

Query: 1381 LRQDD 1395
            LRQ D
Sbjct: 889  LRQGD 893



 Score =  105 bits (261), Expect(2) = 8e-41
 Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 3/205 (1%)
 Frame = +2

Query: 1475 NRDSCEE--VTRKLQMRELDLNEKYLVTNFIIPRSRDNCLDPSINKI*NRLPGWQGKLIN 1648
            N  S E+  V   L M+    NE+YL     + RSR         +I  R+ GW+ KL++
Sbjct: 982  NTSSLEKRAVMAALNMQRETTNERYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLS 1041

Query: 1649 QAGRAVQIQTTLSTSVQYQMGVFMLPDKTHKKINQIQRRYFW-NHK*NKGFNPKSWSSVC 1825
            +AG+ + I+        + MG F L      +I+++  +Y+W N + +   +  SW+ + 
Sbjct: 1042 RAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWNKLT 1101

Query: 1826 TSKRFGGLRFKDSKKFNIAMLTKLAWRLLTQPQKEWVKVLNAIHVKNKDPLVEDISRKNS 2005
              K  GGL F+D   FN+AML K  WRL+  P     +VL A +    D         N 
Sbjct: 1102 LPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGD-CFRPKQTSNV 1160

Query: 2006 SWVWQSIQHGL*VLKQY*IWEIGDG 2080
            S+ W+SIQ GL VL+   IW +GDG
Sbjct: 1161 SYTWRSIQKGLRVLQNGMIWRVGDG 1185



 Score = 92.0 bits (227), Expect(2) = 8e-41
 Identities = 59/199 (29%), Positives = 92/199 (46%), Gaps = 9/199 (4%)
 Frame = +3

Query: 2079 GSPIKALQHNWFPISYNSNT-NARSSYLSNDTRVADLTDTEKKTWNIQLLSQYFNPDQIK 2255
            GS I      W P  ++      R + L   T+V +L D    TW+  LLSQ F  + + 
Sbjct: 1185 GSKINIWADPWIPRGWSRKPMTPRGANLV--TKVEELIDPYTGTWDEDLLSQTFWEEDVA 1242

Query: 2256 EIMTIKIPSKGEDTLRWSLPYCGAFTTKYVYN-------ELSKNNA-GISHLHQMEGKGW 2411
             I +I +  + ED L W     G FT K  Y          S+N   G+S+    +   W
Sbjct: 1243 AIKSIPVHVEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDDFW 1302

Query: 2412 LKLWNMEVPHKIQMFL*KCCHDILPVKKKLFSKNNNMDQLCPLCLNSEETSTHLFLHCQF 2591
             KLW + VP KI+ FL + CH+ L ++  L  +  ++D  C +C    E + HLF  C+ 
Sbjct: 1303 KKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCKP 1362

Query: 2592 AEVIWVGIYAALLQSLKEK 2648
             + +W  +    L+S+ E+
Sbjct: 1363 VKKVWQALNLEELRSMLEQ 1381


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  134 bits (338), Expect(2) = 1e-55
 Identities = 91/321 (28%), Positives = 163/321 (50%), Gaps = 12/321 (3%)
 Frame = +2

Query: 2    FSEKHNFSTNSSPSFQIVHDTIDMHGLRDVPFTGNPFTWSNHRKSTKLVKTRIDRALANN 181
            + EK   ++    +     + +D   L D+ F G   TW   R     ++ R+DR + + 
Sbjct: 145  YDEKEGGASRERRAIVGFRNVMDDCSLGDLRFVGQWHTWERGRSPESRIRERLDRFIVSR 204

Query: 182  NWFTSFKDSVINNLLPHGSDHAPIPLHI----HLPDKTNNKPYRFYKVWLSNPLCKEVLR 349
            +W   F ++ I++ + + SDHA I L       +P +     + F   WL +  C+EV+R
Sbjct: 205  SWLHLFPEAFIDHQVRYCSDHAAIVLRCLGNEGMPRRRAGG-FWFETFWLLDDTCEEVVR 263

Query: 350  KSCHLEESLHLNELPKKIQQTTEALRDWNHKSFGHVKTEIRRTQNLLQKAKNSPRQDTTL 529
             + +  E   + E   K+      L+ W+ K+FG ++ +I   +  L  A+     + T 
Sbjct: 264  GAWNAAEGGRICE---KLGAVARELQGWSKKTFGSLRKKIEAVEKKLHAAQG----EATS 316

Query: 530  IKS------LEDQLNKWYDKSAQITYHQSREQILWFDDRNNKYFHNKANFRRRRNHIDTL 691
            I S      LE +L++ + K+    Y +SR   +   DRN  YFH+KA+ R++RN I  +
Sbjct: 317  IDSWERCVGLERELDELHAKNEAYWYLRSRVAEVKDGDRNTSYFHHKASQRKKRNLIHGI 376

Query: 692  QDSNGNWISNKEEI*KLLLKHFRDIYTSSNPTMD--ADLLNLIQPCVTEK*NQMLIKIPS 865
             D  G W +  EEI  ++ ++F++I+TSS P+ +   ++L  ++  VT++ N +L+K  S
Sbjct: 377  FDGGGRWQTEGEEIECVVERYFQEIFTSSEPSSNDFQEVLQHVKRSVTQEYNDILLKPYS 436

Query: 866  SDEIKEAMFQINPWGVPGPDG 928
             +EI  A+  ++P   PGPDG
Sbjct: 437  KEEIFAALSDMHPCKAPGPDG 457



 Score =  111 bits (278), Expect(2) = 1e-55
 Identities = 62/183 (33%), Positives = 92/183 (50%), Gaps = 31/183 (16%)
 Frame = +1

Query: 940  FYQQFWDIVETNIVSLVQNFFMTGQFPSQINHTFQVLIPKLGISTKPRDCRPISLCNITY 1119
            FYQ+FW I+   + + V +       P  +N T   LIPK+   T   + RPISLCN+ Y
Sbjct: 462  FYQRFWHIIGDEVFNFVSSILHNYSCPGNVNCTNIALIPKVKSPTVVSEFRPISLCNVLY 521

Query: 1120 KLITKILVVQ------------------------------EMVHYMKK-TLFYTGVVGIK 1206
            K+ +K +V++                              E+ H MKK      G++ +K
Sbjct: 522  KIASKAIVLRLKRFLPCIATENQSAFVPGRLISDNSLIALEIFHTMKKRNNSRKGLMAMK 581

Query: 1207 LDMEKTFDRMEWSFLHQILLHLGFSTKWCQLINYCVSTAFISMLLNGVPMEPIIPTRGLR 1386
            LDM K +DR+EW FL ++LL +GF  +W  L+  CV+T   S ++NG     + P+RGLR
Sbjct: 582  LDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLVMSCVATVSYSFIINGRVCGSVTPSRGLR 641

Query: 1387 QDD 1395
            Q D
Sbjct: 642  QGD 644



 Score =  103 bits (257), Expect(2) = 3e-38
 Identities = 62/208 (29%), Positives = 111/208 (53%), Gaps = 1/208 (0%)
 Frame = +2

Query: 1460 FSKHMNRDSCEEVTRKLQMRELDLNEKYLVTNFIIPRSRDNCLDPSINKI*NRLPGWQGK 1639
            FS+ ++ +  EE+   L MR++D ++KYL    +  RS+       ++++  +L GW+ K
Sbjct: 730  FSRGVSCEKKEELITLLHMRQVDRHQKYLGIPALCGRSKKVLFRELLDRMWKKLRGWKEK 789

Query: 1640 LINQAGRAVQIQTTLSTSVQYQMGVFMLPDKTHKKINQIQRRYFWNHK*N-KGFNPKSWS 1816
            L+++AG+ V I+  +     Y MGV+ LP    ++I+    R++W  K + +  +  SW 
Sbjct: 790  LLSRAGKEVLIKAVIQALPTYLMGVYKLPVAVIQEIHSAMARFWWGGKGDERKMHWLSWE 849

Query: 1817 SVCTSKRFGGLRFKDSKKFNIAMLTKLAWRLLTQPQKEWVKVLNAIHVKNKDPLVEDISR 1996
             +C  K  GG+ FKD   FN A+L K  WRLL   +    +V++A +  + D     +  
Sbjct: 850  KMCKPKCMGGMGFKDLAVFNDALLGKQVWRLLHNKESLLSRVMSAKYYPHGDVRYARLGY 909

Query: 1997 KNSSWVWQSIQHGL*VLKQY*IWEIGDG 2080
             + S+ W+SI     ++ +  IW +GDG
Sbjct: 910  SH-SYSWRSIWGAKSLVLEGLIWRVGDG 936



 Score = 85.1 bits (209), Expect(2) = 3e-38
 Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 1/169 (0%)
 Frame = +3

Query: 2175 VADLTDTEKKTWNIQLLSQYFNPDQIKEIMTIKIPSKG-EDTLRWSLPYCGAFTTKYVYN 2351
            V DL D E+K WN++L+ ++FN    + I+ I + ++  +D L W+    G ++ K  Y 
Sbjct: 966  VGDLMDVERKEWNVELIERHFNERDQQCILAIPLSTRCLQDELTWAYSKDGTYSVKTAY- 1024

Query: 2352 ELSKNNAGISHLHQMEGKGWLKLWNMEVPHKIQMFL*KCCHDILPVKKKLFSKNNNMDQL 2531
             +      +   H++    W  LW++ V  K++ FL + C   LPV+K L  ++   +  
Sbjct: 1025 -MLGKGGNLDDFHRV----WNILWSLNVSPKVRHFLWRACTSSLPVRKVLQRRHLIDEAG 1079

Query: 2532 CPLCLNSEETSTHLFLHCQFAEVIWVGIYAALLQSLKEKIFVIDWIVSW 2678
            CP C   +ET  HLF  C  +  +W  + + +L    E   + D +V W
Sbjct: 1080 CPCCAREDETQFHLFYRCPMSLKLWEELGSYILLPGIEDEAMCDTLVRW 1128


>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1229

 Score =  128 bits (321), Expect(2) = 7e-55
 Identities = 86/310 (27%), Positives = 145/310 (46%), Gaps = 2/310 (0%)
 Frame = +2

Query: 5   SEKHNFSTNSSPSFQIVHDTIDMHGLRDVPFTGNPFTWSNHRKSTKLVKTRIDRALANNN 184
           SEK         SF      I  +GL D+ ++GNPF+W   R     V+ R+DRA++NN+
Sbjct: 42  SEKRGGPPRDQGSFIDFRSFISKNGLWDLKYSGNPFSWRGMRYDW-FVRQRLDRAMSNNS 100

Query: 185 WFTSFKDSVINNLLPHGSDHAPIPLHIHLPDKTNNKPYRFYKVWLSNPLCKEVLRKSCHL 364
           W  SF       L   GSDH P+ + +          +RF      N +   +++++   
Sbjct: 101 WLESFPSGRSEYLRFEGSDHRPLVVFVDEARVKRRGQFRFDNRLRDNDVVNALIQETWTN 160

Query: 365 EESLHLNELPKKIQQTTEALRDWNHKSFGHVKTEIRRTQNLLQKAKNSPRQDTTLIKSLE 544
                   +  K+ Q    + +W      +    I +TQ  L++A  +   + T I +L 
Sbjct: 161 AGDA---SVLTKMNQCRREIINWTRLQNLNSAELIEKTQKALEEALTADPPNPTTIGALT 217

Query: 545 DQLNKWYDKSAQITYHQSREQILWFD--DRNNKYFHNKANFRRRRNHIDTLQDSNGNWIS 718
             L   Y    Q  + + R ++LW    DRN  YFH     RR +N +  ++D NG    
Sbjct: 218 ATLEHAYKLEEQ--FWKQRSRVLWLHSGDRNTGYFHAVTRNRRTQNRLTVMEDINGVAQH 275

Query: 719 NKEEI*KLLLKHFRDIYTSSNPTMDADLLNLIQPCVTEK*NQMLIKIPSSDEIKEAMFQI 898
            + +I +++  +F+ I+TS +    + +   I+P V++  N  L +IP+ +E+K+A+F I
Sbjct: 276 EEHQISQIISGYFQQIFTSESDGDFSVVDEAIEPMVSQGDNDFLTRIPNDEEVKDAVFSI 335

Query: 899 NPWGVPGPDG 928
           N    PGPDG
Sbjct: 336 NASKAPGPDG 345



 Score =  115 bits (289), Expect(2) = 7e-55
 Identities = 62/186 (33%), Positives = 95/186 (51%), Gaps = 31/186 (16%)
 Frame = +1

Query: 931  TSGFYQQFWDIVETNIVSLVQNFFMTGQFPSQINHTFQVLIPKLGISTKPRDCRPISLCN 1110
            T+GFY  +W I+ T++   ++ FF +  FP ++N T   LIPK     K  D RPI+LCN
Sbjct: 347  TAGFYHSYWHIISTDVGREIRLFFTSKNFPRRMNETHIRLIPKDLGPRKVADYRPIALCN 406

Query: 1111 ITYKLITKI------------------------------LVVQEMVHYMKKTLFYTGV-V 1197
            I YK++ KI                              L+  E++H+++ +       +
Sbjct: 407  IFYKIVAKIMTKRMQLILPKLISENQSAFVPGRVISDNVLITHEVLHFLRTSSAKKHCSM 466

Query: 1198 GIKLDMEKTFDRMEWSFLHQILLHLGFSTKWCQLINYCVSTAFISMLLNGVPMEPIIPTR 1377
             +K DM K +DR+EW FL ++L   GF + W   +  CV++   S L+NG P   ++PTR
Sbjct: 467  AVKTDMSKAYDRVEWDFLKKVLQRFGFHSIWIDWVLECVTSVSYSFLINGTPQGKVVPTR 526

Query: 1378 GLRQDD 1395
            GLRQ D
Sbjct: 527  GLRQGD 532



 Score = 84.7 bits (208), Expect(2) = 2e-23
 Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 1/209 (0%)
 Frame = +2

Query: 1460 FSKHMNRDSCEEVTRKLQMRELDLNEKYLVTNFIIPRSRDNCLDPSINKI*NRLPGWQGK 1639
            FS    R    +V R L++R+     KYL       R + +     I+KI  +   W  +
Sbjct: 618  FSSKTPRSVKGQVKRILKIRKEGGTGKYLGLPEHFGRRKRDIFGAIIDKIRQKSHSWASR 677

Query: 1640 LINQAGRAVQIQTTLSTSVQYQMGVFMLPDKTHKKINQIQRRYFWNHK*N-KGFNPKSWS 1816
             ++QAG+ V ++  L++   Y M  F LP    +KI  +  R++W+ K + +  +  +WS
Sbjct: 678  FLSQAGKQVMLKAVLASMPLYSMSCFKLPSALCRKIQSLLTRFWWDTKPDVRKTSWVAWS 737

Query: 1817 SVCTSKRFGGLRFKDSKKFNIAMLTKLAWRLLTQPQKEWVKVLNAIHVKNKDPLVEDISR 1996
             +   K  GGL F+D ++ N ++L KL WRLL  P+    ++L   +  +    +E    
Sbjct: 738  KLTNPKNAGGLGFRDIERCNDSLLAKLGWRLLNSPESLLSRILLGKYC-HSSSFMECKLP 796

Query: 1997 KNSSWVWQSIQHGL*VLKQY*IWEIGDGK 2083
               S  W+SI  G  +LK+   W I +G+
Sbjct: 797  SQPSHGWRSIIAGREILKEGLGWLITNGE 825



 Score = 53.9 bits (128), Expect(2) = 2e-23
 Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 1/148 (0%)
 Frame = +3

Query: 2166 DTRVADLTDTEKKTWNIQLLSQYFNPDQIKEIMTIKIPS-KGEDTLRWSLPYCGAFTTKY 2342
            D RV+ L +     W+   ++    P+    I  +  PS +G D L W     G +T++ 
Sbjct: 853  DLRVSALINQNTLQWDWNKIAVIL-PNYENLIKQLPAPSSRGVDKLAWLPVKSGQYTSRS 911

Query: 2343 VYNELSKNNAGISHLHQMEGKGWLKLWNMEVPHKIQMFL*KCCHDILPVKKKLFSKNNNM 2522
             Y   S  +  I    Q +      LW ++   KI+  + K   + LPV  +L  ++ + 
Sbjct: 912  GYGIASVASIPIP---QTQFNWQSNLWKLQTLPKIKHLMWKAAMEALPVGIQLVRRHISP 968

Query: 2523 DQLCPLCLNSEETSTHLFLHCQFAEVIW 2606
               C  C  + E++THLF HC+FA  +W
Sbjct: 969  SAACHRC-GAPESTTHLFFHCEFAAQVW 995


>gb|AAC28197.1| contains similarity to reverse transcriptases [Arabidopsis
           thaliana] gi|7267156|emb|CAB77868.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 1077

 Score =  103 bits (257), Expect(3) = 1e-54
 Identities = 70/259 (27%), Positives = 120/259 (46%), Gaps = 1/259 (0%)
 Frame = +2

Query: 155 RIDRALANNNWFTSFKDSVINNLLPHGSDHAPIPLHI-HLPDKTNNKPYRFYKVWLSNPL 331
           R+DRA+AN++W  ++       L   GSDH P+     H+  KT N  +R+ +    NP 
Sbjct: 172 RLDRAMANSDWIIAYPSGRSEYLRFEGSDHRPLVTSFDHVQKKTKNI-FRYDRTLKDNPE 230

Query: 332 CKEVLRKSCHLEESLHLNELPKKIQQTTEALRDWNHKSFGHVKTEIRRTQNLLQKAKNSP 511
             +++ ++     S  ++    ++     AL +W+ +   + + EI   +  L++A    
Sbjct: 231 ISKLMNETWKSNPSAKVDY---RLHLCRAALLNWSKEHHLNSQKEILSLRVQLEEALTDD 287

Query: 512 RQDTTLIKSLEDQLNKWYDKSAQITYHQSREQILWFDDRNNKYFHNKANFRRRRNHIDTL 691
                 +  L   L   Y K       +SR   L   D+N+ +FH   N RR  N I  +
Sbjct: 288 AATQDSVDLLNQNLLLAYRKEETFWKQRSRNLWLALGDKNSCFFHAATNSRRAINTISVI 347

Query: 692 QDSNGNWISNKEEI*KLLLKHFRDIYTSSNPTMDADLLNLIQPCVTEK*NQMLIKIPSSD 871
           ++S G  +    EI + +  +F+DI+TS      + +   + PC+T   N  LI +P+  
Sbjct: 348 ENSAGTSVYEDSEIIETISDYFQDIFTSQEGDRTSVVAEALSPCITTDMNNTLISLPTVA 407

Query: 872 EIKEAMFQINPWGVPGPDG 928
           EIK+A   I+P   PG DG
Sbjct: 408 EIKQACLSIHPDKAPGRDG 426



 Score = 82.8 bits (203), Expect(3) = 1e-54
 Identities = 59/207 (28%), Positives = 89/207 (42%), Gaps = 37/207 (17%)
 Frame = +1

Query: 931  TSGFYQQFWDIVETNIVSLVQNFFMTGQFPSQINHTFQVLIPKLGISTKPRDCRPISLCN 1110
            ++ F+Q  W  V   I + VQ FF++   P +INHT   LIPK+    K  D RPI+LC+
Sbjct: 428  SASFFQSNWSTVSEEITAEVQAFFISEILPQKINHTHVRLIPKIPAPQKVSDYRPIALCS 487

Query: 1111 ITYKLITK------------------------------ILVVQEMVHYMKKT-LFYTGVV 1197
            + YK+I K                              +L+  E +HY+K +       +
Sbjct: 488  VYYKIIAKLLAKRLQPILHSCISENQSAFVPQRAISDNVLITHEALHYLKNSGALVNCYM 547

Query: 1198 GIKLDMEKTFDRMEWSFLHQILLHLGFSTKWCQLINYCVSTAFISMLLNG------VPME 1359
             +K DM K +DR+EW F+   L  +GF   +   I   +S   +    NG      V M 
Sbjct: 548  AVKTDMSKAYDRLEWDFVKAALEEMGFHHHFVGWIIEVLSRMCLKAQENGSLPGIRVAMG 607

Query: 1360 PIIPTRGLRQDDCIIFTRGNTRSMVNL 1440
                   L  DD + F R + +S + L
Sbjct: 608  CPRVNHLLFADDTMFFCRVDPKSCLKL 634



 Score = 77.8 bits (190), Expect(3) = 1e-54
 Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 1/160 (0%)
 Frame = +2

Query: 1490 EEVTRKLQMRELDLNEKYLVTNFIIPRSRDNCLDPSINKI*NRLPGWQGKLINQAGRAVQ 1669
            E V + L +++     KYL    +  R + +     +++I  R   W  + ++ AG+   
Sbjct: 668  ERVKQILLIQKEGGQGKYLGLPELFGRKKKDLFTAIVDRIKQRALSWSSRFLSSAGKLTM 727

Query: 1670 IQTTLSTSVQYQMGVFMLPDKTHKKINQIQRRYFWNHK*N-KGFNPKSWSSVCTSKRFGG 1846
            +++ LST   Y M  F LP    K+I     R++W+ K + +  +  SW  +  S + GG
Sbjct: 728  LKSVLSTMPTYTMSCFQLPLSLCKRIQSTLTRFWWDSKPDQRKMSWISWQKMTLSFKSGG 787

Query: 1847 LRFKDSKKFNIAMLTKLAWRLLTQPQKEWVKVLNAIHVKN 1966
            L F+D + FN A+L KL+WRLL  P     K+L   + K+
Sbjct: 788  LGFRDVQTFNKALLAKLSWRLLQNPSCLLAKLLLGKYCKH 827


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
            Japonica Group]
          Length = 1382

 Score =  137 bits (345), Expect(2) = 3e-54
 Identities = 91/308 (29%), Positives = 154/308 (50%), Gaps = 9/308 (2%)
 Frame = +2

Query: 32   SSPSFQIVHDTIDMHGLRDVPFTGNPFTWSNHRKSTKLVKTRIDRALANNNWFTSFKDSV 211
            S P  Q     +D  GL D+ F G  FTWSN + +    K R+DRA+AN  +   F+D +
Sbjct: 159  SEPHMQHFRSCLDDCGLIDLGFVGPKFTWSNKQDANSNSKVRLDRAVANGEFSRYFEDCL 218

Query: 212  INNLLPHGSDHAPIPLHIHLPDKTNNK-----PYRFYKVWLSNPLCKEVLRKSCHLEES- 373
            + N++   SDH  I + +   +    +      +RF   WL     +EV+  S  +  + 
Sbjct: 219  VENVITTSSDHYAISIDLSRRNHGQRRIPIQQGFRFEAAWLRAEDYREVVENSWRISSAG 278

Query: 374  -LHLNELPKKIQQTTEALRDWNHKSFGHVKTEIRRTQNLLQKAKNSPRQDTTLI--KSLE 544
             + L  +   +QQ   +L+DW+  SFG V+ +I + +  L+  + SP  D  +   K +E
Sbjct: 279  CVGLRGVWSVLQQVAVSLKDWSKASFGSVRRKILKMERKLKSLRQSPVNDVVIQEEKLIE 338

Query: 545  DQLNKWYDKSAQITYHQSREQILWFDDRNNKYFHNKANFRRRRNHIDTLQDSNGNWISNK 724
             QL + ++K   +   +SR   L   DRN  +FH +A+ RRR N I  L   +G+   ++
Sbjct: 339  QQLCELFEKEEIMARQRSRVDWLREGDRNTAFFHARASARRRTNRIKELVRDDGSRCISQ 398

Query: 725  EEI*KLLLKHFRDIYTSSNPTMDADLLNLIQPCVTEK*NQMLIKIPSSDEIKEAMFQINP 904
            E I ++    + ++++S       ++L+ I   V +  N  L K  +++EIK A+FQ+  
Sbjct: 399  EGIKRMAEVFYENLFSSEPCDSMEEVLDAIPNKVGDFINGELGKQYTNEEIKTALFQMGS 458

Query: 905  WGVPGPDG 928
               PGPDG
Sbjct: 459  TKAPGPDG 466



 Score =  104 bits (260), Expect(2) = 3e-54
 Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 30/184 (16%)
 Frame = +1

Query: 940  FYQQFWDIVETNIVSLVQNFFMTGQFPSQINHTFQVLIPKLGISTKPRDCRPISLCNITY 1119
            FYQ  W I+E +I + V+ F +  + P  +  +  VLIPK+  ++     RPISLCN+ Y
Sbjct: 471  FYQTHWGILEEHICNAVRGFLLGEEIPEGLCDSVVVLIPKVNNASHLSKFRPISLCNVLY 530

Query: 1120 KLITKIL------------------------------VVQEMVHYMKKTLFYTGVVGIKL 1209
            K+ +K+L                              V  E +H ++K         +K+
Sbjct: 531  KIASKVLANRLKPFLPDIVSEFQSAFVPGRLITDSALVAYECLHTIRKQHNKNPFFALKI 590

Query: 1210 DMEKTFDRMEWSFLHQILLHLGFSTKWCQLINYCVSTAFISMLLNGVPMEPIIPTRGLRQ 1389
            DM K +DR+EW++L   L  LGFS  W   +  CVS+   ++ +NG   +P++P+RG+RQ
Sbjct: 591  DMMKAYDRVEWAYLSGCLSKLGFSQDWINTVMRCVSSVRYAVKINGELTKPVVPSRGIRQ 650

Query: 1390 DDCI 1401
             D I
Sbjct: 651  GDPI 654



 Score = 78.6 bits (192), Expect(2) = 1e-26
 Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 1/210 (0%)
 Frame = +2

Query: 1457 FFSKHMNRDSCEEVTRKLQMRELDLNEKYLVTNFIIPRSRDNCLDPSINKI*NRLPGWQG 1636
            FF K         V   LQ+    L + YL     I  +  N       +I  R+ GW  
Sbjct: 737  FFGKRCPDAVKISVKSCLQVDNEVLQDSYLGMPTEIGLATTNFFKFLPERIWKRVNGWTD 796

Query: 1637 KLINQAGRAVQIQTTLSTSVQYQMGVFMLPDKTHKKINQIQRRYFWNHK*NKG-FNPKSW 1813
            + +++AG    ++        Y M  F +P    +K+      ++W  +  K   + KSW
Sbjct: 797  RPLSRAGMETMLKAVAQAIPNYVMSCFRIPVSICEKMKTCIADHWWGFEDGKKKMHWKSW 856

Query: 1814 SSVCTSKRFGGLRFKDSKKFNIAMLTKLAWRLLTQPQKEWVKVLNAIHVKNKDPLVEDIS 1993
            S + T K  GG+ F++   FN AML +  WRLLT P     +VL   +  N     E   
Sbjct: 857  SWLSTPKFLGGMGFREFTTFNQAMLGRQCWRLLTDPDSLCSRVLKGRYFPNSS-FWEAAQ 915

Query: 1994 RKNSSWVWQSIQHGL*VLKQY*IWEIGDGK 2083
             K+ S+ W+S+  G  +L +   W +GDGK
Sbjct: 916  PKSPSFTWRSLLFGRELLAKGVRWGVGDGK 945



 Score = 70.9 bits (172), Expect(2) = 1e-26
 Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 10/186 (5%)
 Frame = +3

Query: 2079 GSPIKALQHNWFPISYNSNTNARSSYLSNDTRVADLTDTEKKTWNIQLLSQYFNPDQIKE 2258
            G  IK    NW P  +        S    D  V+ L + + + W+  L+   F  D  KE
Sbjct: 944  GKTIKIFSDNWIP-GFRPQLVTTLSPFPTDATVSCLMNEDARCWDGDLIRSLFPVDIAKE 1002

Query: 2259 IMTIKIPSKGE-DTLRWSLPYCGAFTTKYVYN---------ELSKNNAGISHLHQMEGKG 2408
            I+ I I   G+ D   W     G ++ +  YN         + S +  G++       K 
Sbjct: 1003 ILQIPISRHGDADFASWPHDKLGLYSVRSAYNLARSEAFFADQSNSGRGMASRLLESQKD 1062

Query: 2409 WLKLWNMEVPHKIQMFL*KCCHDILPVKKKLFSKNNNMDQLCPLCLNSEETSTHLFLHCQ 2588
            W  LW +  P K+++ L +  H+ L    +L  ++      C  C N ++T  H+FL C 
Sbjct: 1063 WKGLWKINAPGKMKITLWRAAHECLATGFQLRRRHIPSTDGCVFC-NRDDTVEHVFLFCP 1121

Query: 2589 FAEVIW 2606
            FA  IW
Sbjct: 1122 FAAQIW 1127


>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
            protein OsJ_32156 [Oryza sativa Japonica Group]
          Length = 1339

 Score =  137 bits (345), Expect(2) = 3e-54
 Identities = 91/308 (29%), Positives = 154/308 (50%), Gaps = 9/308 (2%)
 Frame = +2

Query: 32   SSPSFQIVHDTIDMHGLRDVPFTGNPFTWSNHRKSTKLVKTRIDRALANNNWFTSFKDSV 211
            S P  Q     +D  GL D+ F G  FTWSN + +    K R+DRA+AN  +   F+D +
Sbjct: 116  SEPHMQHFRSCLDDCGLIDLGFVGPKFTWSNKQDANSNSKVRLDRAVANGEFSRYFEDCL 175

Query: 212  INNLLPHGSDHAPIPLHIHLPDKTNNK-----PYRFYKVWLSNPLCKEVLRKSCHLEES- 373
            + N++   SDH  I + +   +    +      +RF   WL     +EV+  S  +  + 
Sbjct: 176  VENVITTSSDHYAISIDLSRRNHGQRRIPIQQGFRFEAAWLRAEDYREVVENSWRISSAG 235

Query: 374  -LHLNELPKKIQQTTEALRDWNHKSFGHVKTEIRRTQNLLQKAKNSPRQDTTLI--KSLE 544
             + L  +   +QQ   +L+DW+  SFG V+ +I + +  L+  + SP  D  +   K +E
Sbjct: 236  CVGLRGVWSVLQQVAVSLKDWSKASFGSVRRKILKMERKLKSLRQSPVNDVVIQEEKLIE 295

Query: 545  DQLNKWYDKSAQITYHQSREQILWFDDRNNKYFHNKANFRRRRNHIDTLQDSNGNWISNK 724
             QL + ++K   +   +SR   L   DRN  +FH +A+ RRR N I  L   +G+   ++
Sbjct: 296  QQLCELFEKEEIMARQRSRVDWLREGDRNTAFFHARASARRRTNRIKELVRDDGSRCISQ 355

Query: 725  EEI*KLLLKHFRDIYTSSNPTMDADLLNLIQPCVTEK*NQMLIKIPSSDEIKEAMFQINP 904
            E I ++    + ++++S       ++L+ I   V +  N  L K  +++EIK A+FQ+  
Sbjct: 356  EGIKRMAEVFYENLFSSEPCDSMEEVLDAIPNKVGDFINGELGKQYTNEEIKTALFQMGS 415

Query: 905  WGVPGPDG 928
               PGPDG
Sbjct: 416  TKAPGPDG 423



 Score =  104 bits (260), Expect(2) = 3e-54
 Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 30/184 (16%)
 Frame = +1

Query: 940  FYQQFWDIVETNIVSLVQNFFMTGQFPSQINHTFQVLIPKLGISTKPRDCRPISLCNITY 1119
            FYQ  W I+E +I + V+ F +  + P  +  +  VLIPK+  ++     RPISLCN+ Y
Sbjct: 428  FYQTHWGILEEHICNAVRGFLLGEEIPEGLCDSVVVLIPKVNNASHLSKFRPISLCNVLY 487

Query: 1120 KLITKIL------------------------------VVQEMVHYMKKTLFYTGVVGIKL 1209
            K+ +K+L                              V  E +H ++K         +K+
Sbjct: 488  KIASKVLANRLKPFLPDIVSEFQSAFVPGRLITDSALVAYECLHTIRKQHNKNPFFALKI 547

Query: 1210 DMEKTFDRMEWSFLHQILLHLGFSTKWCQLINYCVSTAFISMLLNGVPMEPIIPTRGLRQ 1389
            DM K +DR+EW++L   L  LGFS  W   +  CVS+   ++ +NG   +P++P+RG+RQ
Sbjct: 548  DMMKAYDRVEWAYLSGCLSKLGFSQDWINTVMRCVSSVRYAVKINGELTKPVVPSRGIRQ 607

Query: 1390 DDCI 1401
             D I
Sbjct: 608  GDPI 611



 Score = 78.6 bits (192), Expect(2) = 1e-26
 Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 1/210 (0%)
 Frame = +2

Query: 1457 FFSKHMNRDSCEEVTRKLQMRELDLNEKYLVTNFIIPRSRDNCLDPSINKI*NRLPGWQG 1636
            FF K         V   LQ+    L + YL     I  +  N       +I  R+ GW  
Sbjct: 694  FFGKRCPDAVKISVKSCLQVDNEVLQDSYLGMPTEIGLATTNFFKFLPERIWKRVNGWTD 753

Query: 1637 KLINQAGRAVQIQTTLSTSVQYQMGVFMLPDKTHKKINQIQRRYFWNHK*NKG-FNPKSW 1813
            + +++AG    ++        Y M  F +P    +K+      ++W  +  K   + KSW
Sbjct: 754  RPLSRAGMETMLKAVAQAIPNYVMSCFRIPVSICEKMKTCIADHWWGFEDGKKKMHWKSW 813

Query: 1814 SSVCTSKRFGGLRFKDSKKFNIAMLTKLAWRLLTQPQKEWVKVLNAIHVKNKDPLVEDIS 1993
            S + T K  GG+ F++   FN AML +  WRLLT P     +VL   +  N     E   
Sbjct: 814  SWLSTPKFLGGMGFREFTTFNQAMLGRQCWRLLTDPDSLCSRVLKGRYFPNSS-FWEAAQ 872

Query: 1994 RKNSSWVWQSIQHGL*VLKQY*IWEIGDGK 2083
             K+ S+ W+S+  G  +L +   W +GDGK
Sbjct: 873  PKSPSFTWRSLLFGRELLAKGVRWGVGDGK 902



 Score = 70.9 bits (172), Expect(2) = 1e-26
 Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 10/186 (5%)
 Frame = +3

Query: 2079 GSPIKALQHNWFPISYNSNTNARSSYLSNDTRVADLTDTEKKTWNIQLLSQYFNPDQIKE 2258
            G  IK    NW P  +        S    D  V+ L + + + W+  L+   F  D  KE
Sbjct: 901  GKTIKIFSDNWIP-GFRPQLVTTLSPFPTDATVSCLMNEDARCWDGDLIRSLFPVDIAKE 959

Query: 2259 IMTIKIPSKGE-DTLRWSLPYCGAFTTKYVYN---------ELSKNNAGISHLHQMEGKG 2408
            I+ I I   G+ D   W     G ++ +  YN         + S +  G++       K 
Sbjct: 960  ILQIPISRHGDADFASWPHDKLGLYSVRSAYNLARSEAFFADQSNSGRGMASRLLESQKD 1019

Query: 2409 WLKLWNMEVPHKIQMFL*KCCHDILPVKKKLFSKNNNMDQLCPLCLNSEETSTHLFLHCQ 2588
            W  LW +  P K+++ L +  H+ L    +L  ++      C  C N ++T  H+FL C 
Sbjct: 1020 WKGLWKINAPGKMKITLWRAAHECLATGFQLRRRHIPSTDGCVFC-NRDDTVEHVFLFCP 1078

Query: 2589 FAEVIW 2606
            FA  IW
Sbjct: 1079 FAAQIW 1084


>gb|EEE52364.1| hypothetical protein OsJ_34428 [Oryza sativa Japonica Group]
          Length = 1102

 Score =  129 bits (325), Expect(2) = 4e-54
 Identities = 78/286 (27%), Positives = 147/286 (51%), Gaps = 4/286 (1%)
 Frame = +2

Query: 83   RDVPFTGNPFTWSNHRKSTKLVKTRIDRALANNNWFTSFKDSVINNLLPHGSDHAPIPLH 262
            R  P  G PFT+ N R+    V+ R+DRA+A+N W  +F ++ + +L    SDH PI L 
Sbjct: 587  RGEPQMGTPFTYDNKRQGRNNVRVRLDRAIADNAWRDTFPNATLAHLASPRSDHCPISLQ 646

Query: 263  I--HLPDKTNNKPYRFYKVWLSNPLCKEVLRKS-CHLEESLHLNELPKKIQQTTEALRDW 433
            +   +      K   +   W   P   EV+++S         L ++   +++   +L  W
Sbjct: 647  LSQEMKQPARKKILHYEICWEREPSLPEVVQESWVEAGTKSDLGDISAALRKVMASLHSW 706

Query: 434  NHKSFGHVKTEIRRTQNLLQKAKNSPRQDTTLIKSLEDQLNKWYDKSAQITYHQSREQIL 613
            +   F ++  E+++ +  L +   +   D+  ++   D +N+   +   +   +SR   L
Sbjct: 707  SKVKFKNIGRELQKARKKLAELLET-YADSAAVRQASDHMNELLYREEMLWLQRSRINWL 765

Query: 614  WFDDRNNKYFHNKANFRRRRNHIDTLQDSNGNWISNKEEI*KLLLKHFRDIYTSSNPTMD 793
               DRN ++FH+KA +R ++N I +L+DS G    +   + +L  ++F+++Y S++P++D
Sbjct: 766  KEGDRNTRFFHSKAVWRAKKNRIQSLKDSAGTVHRSATAMEQLATEYFQEVY-SADPSLD 824

Query: 794  ADLL-NLIQPCVTEK*NQMLIKIPSSDEIKEAMFQINPWGVPGPDG 928
              ++ +  Q  V+ + N+ L    + +EI  A+FQI P   PGPDG
Sbjct: 825  HSIVSSFFQSKVSAQMNEALCSDLTEEEISTAIFQIGPLKAPGPDG 870



 Score =  112 bits (279), Expect(2) = 4e-54
 Identities = 63/183 (34%), Positives = 92/183 (50%), Gaps = 31/183 (16%)
 Frame = +1

Query: 940  FYQQFWDIVETNIVSLVQNFFMTGQFPSQINHTFQVLIPKLGISTKPRDCRPISLCNITY 1119
            FYQ+ W  +++ +V  V NFF+ G  P  IN T  VLIPK+   T+ +D RPISLCN+ Y
Sbjct: 875  FYQRNWGTIKSEVVKAVHNFFIIGVMPEGINDTAIVLIPKIKQPTQLKDYRPISLCNVIY 934

Query: 1120 KLITKILVVQ------------------------------EMVHYMKKTLF-YTGVVGIK 1206
            K+++K LV +                              E  H+++K           K
Sbjct: 935  KVVSKCLVNRLRPFLDELVSPNQSAFVPERLITDNALVAFECFHFIQKNKNPNKAACAYK 994

Query: 1207 LDMEKTFDRMEWSFLHQILLHLGFSTKWCQLINYCVSTAFISMLLNGVPMEPIIPTRGLR 1386
            LD+ K ++R++W FL Q +  +GF+ +W   I  CV+T   S+  NG  +    PTRGLR
Sbjct: 995  LDLSKAYNRVDWRFLEQAMHKMGFAHRWVSWIMSCVTTVRYSVKFNGTLLSAFAPTRGLR 1054

Query: 1387 QDD 1395
            Q D
Sbjct: 1055 QGD 1057


>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
            lycopersicum]
          Length = 1333

 Score =  157 bits (397), Expect(2) = 1e-53
 Identities = 93/307 (30%), Positives = 157/307 (51%), Gaps = 7/307 (2%)
 Frame = +2

Query: 29   NSSPSFQIVHDTIDMHGLRDVPFTGNPFTWSNHRKSTKLVKTRIDRALANNNWFTSFKDS 208
            N + S + ++  I+  GL D+ + G  +TW NHRK    +  R+DR + N+ W  +   S
Sbjct: 98   NINKSLEFIN-IIEACGLVDMGYHGQDYTWCNHRKDGARIWKRLDRGMTNDKWIETIPHS 156

Query: 209  VINNLLPHGSDHAPIPLHIHLPDKTNNKPYRFYKVWLSNPLCKEVLRKSCHLEESLH--L 382
             I +L   GSDH P+ + I        K ++F   W  N    E + K C   + +   +
Sbjct: 157  SITHLPSVGSDHCPLLMEICDIQSNTIKYFKFLNCWTENDSFLETVEK-CWKRDVIGNPM 215

Query: 383  NELPKKIQQTTEALRDWNHKSFGHVKTEIRRTQNLLQKAKNSPRQDTTLIKSLE-DQLNK 559
                 K+++ T+ LR W+ + +G V  +++  ++L++KA+N    + +   S + + +N 
Sbjct: 216  WNFHTKLRRLTKTLRIWSKQEYGDVFEKVKLYEDLVKKAENIIIDNYSAKNSEKLNAINA 275

Query: 560  WYDKSAQITYH--QSREQILWFD--DRNNKYFHNKANFRRRRNHIDTLQDSNGNWISNKE 727
             Y K +++ Y   Q + Q+ W    D N KYFH     +R R  I  L D +GNWI  +E
Sbjct: 276  EYIKFSKMEYKILQQKTQLHWLQEGDANTKYFHTVIRGKRNRMSIHKLMDESGNWIKGEE 335

Query: 728  EI*KLLLKHFRDIYTSSNPTMDADLLNLIQPCVTEK*NQMLIKIPSSDEIKEAMFQINPW 907
            EI K    ++  I+T  N  +  D+L  I P +T++ N+ L +IP  DE++  +  +NP 
Sbjct: 336  EIAKHACDYYEKIFTGMNGKIKEDILQCINPMITQEQNKDLDRIPDMDELRRTIMSMNPH 395

Query: 908  GVPGPDG 928
              PGPDG
Sbjct: 396  SAPGPDG 402



 Score = 82.8 bits (203), Expect(2) = 1e-53
 Identities = 55/182 (30%), Positives = 90/182 (49%), Gaps = 30/182 (16%)
 Frame = +1

Query: 940  FYQQFWDIVETNIVSLVQNFFMTGQFPSQINHTFQVLIPKLGISTKPRDCRPISLCNITY 1119
            FYQ  +DI++ ++++ V++F++    P  + H    LIPK+    + +D RPISL N T 
Sbjct: 407  FYQVCFDIIKEDLLAAVKHFYVGNIMPRYLTHACLTLIPKIDHPCRLKDFRPISLSNFTN 466

Query: 1120 KLITK------------------------------ILVVQEMVHYMKKTLFYTGVVGIKL 1209
            K+I+K                              IL+ QE+ H +KK    + VV IKL
Sbjct: 467  KIISKILSTRLALILPSIVSANQSGFVKGRSIAENILLAQEIFHGIKKPKDGSNVV-IKL 525

Query: 1210 DMEKTFDRMEWSFLHQILLHLGFSTKWCQLINYCVSTAFISMLLNGVPMEPIIPTRGLRQ 1389
            DM K +DR+ W++   +L  +GFS  +   +   +S  + S+++NG         RGL+Q
Sbjct: 526  DMVKAYDRVSWNYTCLVLRKMGFSEVFIDRVWRIMSNNWYSIVINGKRHGFFQSKRGLKQ 585

Query: 1390 DD 1395
             D
Sbjct: 586  GD 587


>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis
            thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1|
            reverse transcriptase [Arabidopsis thaliana]
          Length = 1333

 Score =  127 bits (318), Expect(2) = 2e-53
 Identities = 89/309 (28%), Positives = 144/309 (46%), Gaps = 2/309 (0%)
 Frame = +2

Query: 8    EKHNFSTNSSPSFQIVHDTIDMHGLRDVPFTGNPFTWSNHRKSTKLVKTRIDRALANNNW 187
            EK         SF    D +D   + ++P  GNPFTW   + +   +++R+DR   N NW
Sbjct: 147  EKRGGPRRGDSSFLPFTDMLDSCDMLELPSIGNPFTWGG-KTNEMWIQSRLDRCFGNKNW 205

Query: 188  FTSFKDSVINNLLPHGSDHAPIPLHIHLPDKTNNKPYRFYKVWLSNPLCKEVLRKSCHLE 367
            F  F  S    L   GSDH P+ + +    +     +RF K   + P  KE + ++ +  
Sbjct: 206  FRFFPISNQEFLDKRGSDHRPVLVRLTKTKEEYRGNFRFDKRLFNQPNVKETIVQAWNGS 265

Query: 368  ESLHLNELPKKIQQTTEALRDWNHKSFGHVKTEIRRTQNLLQKAKNSPRQDTTLIKSLED 547
            +      +  K++    AL  W  ++  +  T I + +  L+  ++S      L+ SL++
Sbjct: 266  QRNENLLVLDKLKHCRSALSRWKKENNINSSTRITQARAALELEQSSGFPRADLVFSLKN 325

Query: 548  QLNKWYDKSAQITYHQSREQILWFDDRNNKYFHNKANFRRRRNHIDTLQDSNGNWISNKE 727
             L K           +SR + +   D+N  +FH      R + HID L D NG  + +K+
Sbjct: 326  DLCKANHDEEVFWSQKSRAKWMHSGDKNTSFFHASVKDNRGKQHIDQLCDVNG--LFHKD 383

Query: 728  EI*K--LLLKHFRDIYTSSNPTMDADLLNLIQPCVTEK*NQMLIKIPSSDEIKEAMFQIN 901
            E+ K  +   +F D++ S++P+   DL    QP VTE  N  LI   S +EI+EA+F I 
Sbjct: 384  EMNKGAIAEAYFSDLFKSTDPSSFVDLFEDYQPRVTESMNNTLIAAVSKNEIREAVFAIR 443

Query: 902  PWGVPGPDG 928
                PG DG
Sbjct: 444  SSSAPGVDG 452



 Score =  112 bits (279), Expect(2) = 2e-53
 Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 31/186 (16%)
 Frame = +1

Query: 931  TSGFYQQFWDIVETNIVSLVQNFFMTGQFPSQINHTFQVLIPKLGISTKPRDCRPISLCN 1110
            T  F+Q++W I+   +   +QNFF+ G FP   N T   L+PK     K  D RPISLC+
Sbjct: 454  TGFFFQKYWSIICLQVTKEIQNFFLLGYFPKSWNFTHLCLLPKKKKPDKMTDLRPISLCS 513

Query: 1111 ITYKLITK------------------------------ILVVQEMVHYMKKTLFYT-GVV 1197
            + YK+I+K                              IL+  E+VH ++     + G +
Sbjct: 514  VLYKIISKIMVRRLQPFLPDLVSPNQSAFVAERLIFDNILIAHEVVHGLRTHKSVSKGFI 573

Query: 1198 GIKLDMEKTFDRMEWSFLHQILLHLGFSTKWCQLINYCVSTAFISMLLNGVPMEPIIPTR 1377
             IK +M K FDR+EW+++  +L  LGF  KW   I + +S+   S+L+N      I+P+R
Sbjct: 574  AIKSNMSKAFDRVEWNYVRALLDALGFHQKWVGWIMFMISSVSYSVLINDKAFGNIVPSR 633

Query: 1378 GLRQDD 1395
            GLRQ D
Sbjct: 634  GLRQGD 639



 Score = 70.5 bits (171), Expect(2) = 2e-16
 Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 3/173 (1%)
 Frame = +2

Query: 1571 SRDNCLDPSINKI*NRLPGWQGKLINQAGRAVQIQTTLSTSVQYQMGVFMLPDKTHKKIN 1750
            S+   LD   +++  RL GW  + ++  G+   ++      + Y M  F L   T   + 
Sbjct: 762  SKVQLLDYIKDRLKTRLSGWFARTLSMGGKETLLKAFALALLFYAMSCFKLTKTTCVNMT 821

Query: 1751 QIQRRYFWNHK*NKGFNPKSWSS---VCTSKRFGGLRFKDSKKFNIAMLTKLAWRLLTQP 1921
                 ++WN   +K      W S   +C SK  GGL F+D + FN A+L K AWRLL  P
Sbjct: 822  SAMSDFWWNALEHK--RKTHWVSCEKMCLSKENGGLGFRDIESFNQALLAKQAWRLLQFP 879

Query: 1922 QKEWVKVLNAIHVKNKDPLVEDISRKNSSWVWQSIQHGL*VLKQY*IWEIGDG 2080
               + +   + +   +D L  ++ +   S+ W+SI HG  +L +    ++G+G
Sbjct: 880  NSLFARFFKSRYYDEEDFLDAEL-KATPSYAWRSILHGRDLLIKGFRKKVGNG 931



 Score = 45.1 bits (105), Expect(2) = 2e-16
 Identities = 36/151 (23%), Positives = 58/151 (38%), Gaps = 4/151 (2%)
 Frame = +3

Query: 2166 DTRVADLTDTEKKTWNIQLLSQYFNPDQIKEIMTIKIPSKGEDTLRWSLPYCGAFTTKYV 2345
            D RV DL + E +      L + F P  I+ I+        +D   W     G ++ K  
Sbjct: 960  DLRVHDLINVEDRCRRRDRLEELFYPADIEIIVKRNPVVSMDDFWVWLHSKSGEYSVKSG 1019

Query: 2346 YNELSKNNAG--ISHLHQMEGKGWLK--LWNMEVPHKIQMFL*KCCHDILPVKKKLFSKN 2513
            Y    + N    I           LK  +W+     KI++FL +     LPV  ++  + 
Sbjct: 1020 YWLAFQTNKPELIREARVQPSTNGLKEKIWSTLTSPKIKLFLWRILSSALPVAYQIIRRG 1079

Query: 2514 NNMDQLCPLCLNSEETSTHLFLHCQFAEVIW 2606
              +D  C +C    E+  H+   C  A  +W
Sbjct: 1080 MPIDPRCQVCGEEGESINHVLFTCSLARQVW 1110


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