BLASTX nr result

ID: Papaver27_contig00027709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00027709
         (486 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268328.1| PREDICTED: uncharacterized protein LOC100263...    61   2e-07
ref|XP_007028975.1| DNA-binding bromodomain-containing protein, ...    57   3e-06

>ref|XP_002268328.1| PREDICTED: uncharacterized protein LOC100263099 [Vitis vinifera]
           gi|147768907|emb|CAN75881.1| hypothetical protein
           VITISV_024454 [Vitis vinifera]
          Length = 686

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 56/172 (32%), Positives = 89/172 (51%), Gaps = 11/172 (6%)
 Frame = -3

Query: 484 EEREESLKK-DNNINNLDVKPDLLENRAKEEEEDGKQIQTEPLRSPIENKADKPVPGDES 308
           EERE+S K+ DN++   D+  ++ E R+K+E ++G ++   P +S  E  A K + G+ES
Sbjct: 147 EEREQSTKENDNDVVKPDLDDEVKEERSKDEVKEGDEV---PEKSSPEGDAGKLISGEES 203

Query: 307 DRDNQSF------XXEVEKIPETVTEKQDRLGEDSCNGSS--ETIAKDS--VVRDVKKSS 158
           DR+N+S         + E I ET  E+  R  E +  GS+  + ++ DS  V  D    S
Sbjct: 204 DRENRSVNESNSTGVKGENI-ETAVEEAAREPEPTEPGSTKPDPVSSDSKPVGEDSYNGS 262

Query: 157 ETTIPVRETREPAELWESVAXXXXXXXXXXXXXXXXSDVQSSASLSKRNRRR 2
                 ++  + +EL ES A                SDVQSSASL+++ +RR
Sbjct: 263 SEPNRAKKADDSSELRESAA-------HSKDGTKESSDVQSSASLTRKRKRR 307


>ref|XP_007028975.1| DNA-binding bromodomain-containing protein, putative [Theobroma
           cacao] gi|508717580|gb|EOY09477.1| DNA-binding
           bromodomain-containing protein, putative [Theobroma
           cacao]
          Length = 693

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 61/188 (32%), Positives = 84/188 (44%), Gaps = 27/188 (14%)
 Frame = -3

Query: 484 EEREESLKKDNNINNLDVKPDLLENRAKEEEEDGKQIQTEPLRSPIENKADKPV-PGDES 308
           EERE+SL  +        K DL     +EEE + K+ + EP     EN+  KPV  G+ES
Sbjct: 125 EEREQSLGDNGKETE---KTDL----EREEESNKKEEENEP-----ENQIQKPVHAGEES 172

Query: 307 DRDNQSFXX------------------EVEKIP------ETVTEKQDR--LGEDSCNGSS 206
           DR+N+S                     +VE +P      ET  E +     GEDSCNGS 
Sbjct: 173 DRENRSVNESNSTDPKDESPEAGPEEAKVEPVPVEPEGGETGKEMESEKPAGEDSCNGSC 232

Query: 205 ETIAKDSVVRDVKKSSETTIPVRETREPAELWESVAXXXXXXXXXXXXXXXXSDVQSSAS 26
           +++AK+S     +    T        EP +  ESVA                SDVQSSAS
Sbjct: 233 DSVAKESAGNSERGDPGT--------EPGDSPESVA-----ESKGEEPNRESSDVQSSAS 279

Query: 25  LSKRNRRR 2
           LS + +++
Sbjct: 280 LSGKEKKK 287


Top