BLASTX nr result

ID: Papaver27_contig00027535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00027535
         (4116 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   244   e-143
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   256   e-143
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   249   e-139
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...   241   e-127
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...   239   e-126
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   230   e-125
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   261   e-124
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   222   e-124
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   236   e-120
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           236   e-120
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00...   248   e-119
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...   238   e-118
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...   261   e-117
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   253   e-111
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   244   e-110
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   259   e-110
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...   194   e-108
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               251   e-102
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...   239   e-100
emb|CCA66180.1| hypothetical protein [Beta vulgaris subsp. vulga...   196   e-100

>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  244 bits (623), Expect(4) = e-143
 Identities = 145/452 (32%), Positives = 229/452 (50%), Gaps = 6/452 (1%)
 Frame = -2

Query: 2555 FVRTFVYRYNSEELRDDLWYKISNFAGD---NNLPWCILGDFNAYLFSHDKEGGAALTSA 2385
            FV TFVY  N    R  LW ++   A +   ++ PW ILGDFN  L   D   G +  + 
Sbjct: 103  FVVTFVYAVNCRYGRRRLWSELELLAANQTTSDKPWIILGDFNQSLDPVDASTGGSRITR 162

Query: 2384 NLYRFHACVQNSHLFVCPYVGCFYTWSNKQDVDARITCKLDRVLINMAWLDCFPDSVTDF 2205
             +  F  C+  S++   P+ G  YTW N Q+ +  I  K+DR+L+N +WL   P S   F
Sbjct: 163  GMEEFRECLLTSNISDLPFRGNHYTWWNNQENNP-IAKKIDRILVNDSWLIASPLSYGSF 221

Query: 2204 LTCGISDHSLMVTSVFSGRGTVTKAYRYYNTWEEESDFLGVVAAAWN-IKVQGTPMFIFV 2028
                 SDH     ++ +  G   K ++  N      +F+  +   W+ +  QG+ MF   
Sbjct: 222  CAMEFSDHCPSCVNISNQSGGRNKPFKLSNFLMHHPEFIEKIRVTWDRLAYQGSAMFTLS 281

Query: 2027 TKL*NVKKALIAWRKKRFTNFSTQVGVAKAHLANVQKELQVSPFCVDTIDAEREEVRDYA 1848
             K   +K  +  + ++ ++    +V  A  +L   Q  L  +P        E+E  R +A
Sbjct: 282  KKSKFLKGTIRTFNREHYSGLEKRVVQAAQNLKTCQNNLLAAPSSY-LAGLEKEAHRSWA 340

Query: 1847 KKARYEESMKKQQSRVRWMQLGDNNTPFFHNSIIERIARNRILVLYDVAGTKLTSDQDIA 1668
            + A  EE    Q+SRV W++ GD+NT FFH  +  R A N I  L D  G ++ +  ++ 
Sbjct: 341  ELALAEERFLCQKSRVLWLKCGDSNTTFFHRMMTARRAINEIHYLLDQTGRRIENTDELQ 400

Query: 1667 AECIAYYTNLFGQHSATPFDAQAWDQIE--LQHKVSEEEAISLTMPITNDEIILALSTID 1494
              C+ ++  LFG  S     A+   QI    + K  E     L   ++  +I      + 
Sbjct: 401  THCVDFFKELFGSSSHL-ISAEGISQINSLTRFKCDENTRQLLEAEVSEADIKSEFFALP 459

Query: 1493 SDKAPGPNGFSSHFFKCCWSVIGVDFIKEVKSCFASAKLLGEVNATLVSLIPKIPNASTF 1314
            S+K+PGP+G++S FFK  WS++G   I  V+  F S +LLG+ N+T V+++PK PNA   
Sbjct: 460  SNKSPGPDGYTSEFFKKTWSIVGPSLIAAVQEFFRSGRLLGQWNSTAVTMVPKKPNADRI 519

Query: 1313 NDYRPIACCNVIYKCISKILTIRLKHVVKSWL 1218
             ++RPI+CCN IYK ISK+L  RL++++  W+
Sbjct: 520  TEFRPISCCNAIYKVISKLLARRLENILPLWI 551



 Score =  231 bits (589), Expect(4) = e-143
 Identities = 122/321 (38%), Positives = 183/321 (57%), Gaps = 1/321 (0%)
 Frame = -1

Query: 1221 VSPCQSAFISRRSIQDNIMLAHELLRNYHRNNGARRCALKIDLRKAYDCIRWDALLTTLD 1042
            +SP QSAF+  R + +N++LA EL++ + + N + R  LK+DLRKA+D + W  ++ TL 
Sbjct: 551  ISPSQSAFVKGRLLTENVLLATELVQGFGQANISSRGVLKVDLRKAFDSVGWGFIIETLK 610

Query: 1041 KFHIPQRFINWVSMCITAPKFSIMVNGSAYGYIEGKRGIRQGCPLSPYLFVLLMDVFNAL 862
              + P RF+NW+  CIT+  FSI V+GS  GY +G +G+RQG PLSP LFV+ M++ + L
Sbjct: 611  AANAPPRFVNWIKQCITSTSFSINVSGSLCGYFKGSKGLRQGDPLSPSLFVIAMEILSRL 670

Query: 861  MLKQVQLGFYSLHPRCKNPIVTHLCFADDLLVCMKGDVQSARSLSSTLTTFSNRTGLEVN 682
            +  +   G    HP+     ++ L FADDL++   G   S R + S L +F N +GLE+N
Sbjct: 671  LENKFSDGSIGYHPKASEVRISSLAFADDLMIFYDGKASSLRGIKSVLESFKNLSGLEMN 730

Query: 681  NRKSSIFISSVDATTSLSIQAMLRFEXXXXXXXXXXXXXLSSRLSHSDCVALIDHVIARI 502
              KS+++ + ++ T      A   F              L  +L  SD   LID + AR 
Sbjct: 731  TEKSAVYTAGLEDTDKEDTLA-FGFVNGTFPFRYLGLPLLHRKLRRSDYSQLIDKIAARF 789

Query: 501  KSWKERSLSFAGRVLLNKVILSSMLIFWTSCFVLPKKTVNTLNAIFRNFLWSGIELTHKH 322
              W  ++LSFAGR+ L   ++ S + FW S F+LPK  + T+  +   FLW G ++T + 
Sbjct: 790  NHWATKTLSFAGRLQLISSVIYSTVNFWLSSFILPKCCLKTIEQMCNRFLW-GNDITRRG 848

Query: 321  P-SVKWSFVCLPYKEGGLGIR 262
               V W   CLP  EGGLG+R
Sbjct: 849  DIKVSWQNSCLPKAEGGLGLR 869



 Score = 55.1 bits (131), Expect(4) = e-143
 Identities = 23/74 (31%), Positives = 37/74 (50%)
 Frame = -2

Query: 233  NFKHIWDIVINKDTIWVQWVQQNLIKGKDFWLLKTLVDASRCWRRILDHREAASKFVLHL 54
            N + IW +   +D++WV W   N ++  +FW  +     S  W+ IL  R  A +F+   
Sbjct: 879  NLRLIWMLFARRDSLWVAWNHANRLRHVNFWNAEAASHHSWIWKAILGLRPLAKRFLRGA 938

Query: 53   IGNGRGTKLWKDRW 12
            +GNG+    W D W
Sbjct: 939  VGNGQLLSYWYDHW 952



 Score = 52.8 bits (125), Expect(4) = e-143
 Identities = 27/85 (31%), Positives = 44/85 (51%)
 Frame = -1

Query: 2826 WNIRGLNDPLKQVEVSNLIRNNNIKICGLVETLVQESNKDIIRNNILPSWMYSDNYSYHA 2647
            WN+RG N+ +++       + +      ++ET V+E        +  P W    NY + A
Sbjct: 7    WNVRGFNNSVRRRNFRKWFKLSKALFGSILETRVKEHRARRSLLSSFPGWKSVCNYEFAA 66

Query: 2646 LGRIWLLWDPVSVKINFLFSSAQYI 2572
            LGRIW++WDP +V++  L  S Q I
Sbjct: 67   LGRIWVVWDP-AVEVTVLSKSDQTI 90


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  256 bits (654), Expect(4) = e-143
 Identities = 121/322 (37%), Positives = 187/322 (58%)
 Frame = -1

Query: 1209 QSAFISRRSIQDNIMLAHELLRNYHRNNGARRCALKIDLRKAYDCIRWDALLTTLDKFHI 1030
            QSAF+  R + +N++LA EL+++YH++  + RCA+KID+ KA+D ++W  L+        
Sbjct: 562  QSAFVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDISKAFDSVQWPFLINVFTILGF 621

Query: 1029 PQRFINWVSMCITAPKFSIMVNGSAYGYIEGKRGIRQGCPLSPYLFVLLMDVFNALMLKQ 850
            P+ FI+W+++CIT   FS+ VNG   GY +  RG+RQGC LSPYLFV+ MDV + ++ K 
Sbjct: 622  PREFIHWINICITTASFSVQVNGELAGYFQSSRGLRQGCALSPYLFVICMDVLSKMLDKA 681

Query: 849  VQLGFYSLHPRCKNPIVTHLCFADDLLVCMKGDVQSARSLSSTLTTFSNRTGLEVNNRKS 670
                 +  HP+CK   +THL FADDL+V   G ++S   +      F+  +GL ++  KS
Sbjct: 682  AAARHFGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKS 741

Query: 669  SIFISSVDATTSLSIQAMLRFEXXXXXXXXXXXXXLSSRLSHSDCVALIDHVIARIKSWK 490
            +++++ + AT    +     F              ++ RLS +DC+ L++ V  RI SW 
Sbjct: 742  TVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWT 801

Query: 489  ERSLSFAGRVLLNKVILSSMLIFWTSCFVLPKKTVNTLNAIFRNFLWSGIELTHKHPSVK 310
             R LS+AGR+ L   +L S+  FW + F LP+K +  L  +   FLWSG E+      + 
Sbjct: 802  SRFLSYAGRLNLISSVLWSICNFWLAAFRLPRKCIRELEKMCSAFLWSGTEMNSNKAKIS 861

Query: 309  WSFVCLPYKEGGLGIRCIEATN 244
            W  VC P  EGGLG+R ++  N
Sbjct: 862  WHMVCKPKDEGGLGLRSLKEAN 883



 Score =  201 bits (512), Expect(4) = e-143
 Identities = 144/462 (31%), Positives = 215/462 (46%), Gaps = 16/462 (3%)
 Frame = -2

Query: 2555 FVRTFVYRYNSEELRDDLWYKISNFAGD---NNLPWCILGDFNAYL--FSHDKEGGAALT 2391
            F  +FVY  N  E R  LW ++ +        + PW +LGDFN  L    H +     + 
Sbjct: 102  FFCSFVYASNYVEERKVLWSELKDHYDSPIIRHKPWTLLGDFNETLDIAEHSQSFVHPMV 161

Query: 2390 SANLYRFHACVQNSHLFVCPYVGCFYTWSNKQDVDARITCKLDRVLINMAWLDCFPDSVT 2211
            +  +  F   +    L      G  +TW NK++    I  KLDRVLIN  W   F  S +
Sbjct: 162  TPGMRDFQQVINYCSLTDMAAQGPLFTWCNKRE-HGLIMKKLDRVLINDCWNQTFSQSYS 220

Query: 2210 DFLTCGISDHSLMVTSVFSGRGTVT---KAYRYYNTWEEESDFLGVVAAAWN----IKVQ 2052
             F   G SDH     S+ S  G      K +++ N   +  DF  +V+  W     + + 
Sbjct: 221  VFEAGGCSDHLRCRISLNSEAGNKVQGLKPFKFVNALTDMEDFKPMVSTYWKDTEPLILS 280

Query: 2051 GTPMFIFVTKL*NVKKALIAWRKKRFTNFSTQVGVAKAHLANVQKELQVSPFCVDTIDAE 1872
             + +F F   L  +K  + +  + R  N S +   A   L   Q     +P  +  ++ E
Sbjct: 281  TSTLFRFSKNLKGLKPKIRSMARDRLGNLSKKANEAYKILCAKQHVNLTNPSSM-AMEEE 339

Query: 1871 REEVRDYAKKARYEESMKKQQSRVRWMQLGDNNTPFFHNSIIERIARNRILVLYDVAGTK 1692
                  + + A  EE   KQ+S++ W Q+GD NT  FH +   R A N I  +    G  
Sbjct: 340  NAAYSRWDRVAILEEKYLKQKSKLHWCQVGDQNTKAFHRAAAAREAHNTIREILSNDGIV 399

Query: 1691 LTSDQDIAAECIAYYTNLFGQHSATPFDAQAWDQIELQH----KVSEEEAISLTMPITND 1524
             T   +I AE   ++          P D +     ELQ     + S+ +  SL  P+T +
Sbjct: 400  KTKGDEIKAEAERFFREFL---QLIPNDFEGVTITELQQLLPVRCSDADQQSLIRPVTAE 456

Query: 1523 EIILALSTIDSDKAPGPNGFSSHFFKCCWSVIGVDFIKEVKSCFASAKLLGEVNATLVSL 1344
            EI   L  + SDK+PGP+G++S FFK  W +IG +F   V+S F    L   +N+T+++L
Sbjct: 457  EIRKVLFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILAL 516

Query: 1343 IPKIPNASTFNDYRPIACCNVIYKCISKILTIRLKHVVKSWL 1218
            IPK   A    DYRPI+CCNV+YK ISKI+  RLK V+  ++
Sbjct: 517  IPKKTEAREMKDYRPISCCNVLYKVISKIIANRLKLVLPKFI 558



 Score = 65.9 bits (159), Expect(4) = e-143
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = -2

Query: 227  KHIWDIVINKDTIWVQWVQQNLIKGKDFWLLK-TLVDASRCWRRILDHREAASKFVLHLI 51
            K +W IV + +++WV+WV Q+L++   FW +K T+   S  W+++L +RE A       +
Sbjct: 889  KLVWKIVSHSNSLWVKWVDQHLLRNASFWEVKQTVSQGSWIWKKLLKYREVAKTLSKVEV 948

Query: 50   GNGRGTKLWKDRW 12
            GNG+ T  W D W
Sbjct: 949  GNGKQTSFWYDNW 961



 Score = 59.3 bits (142), Expect(4) = e-143
 Identities = 29/85 (34%), Positives = 45/85 (52%)
 Frame = -1

Query: 2826 WNIRGLNDPLKQVEVSNLIRNNNIKICGLVETLVQESNKDIIRNNILPSWMYSDNYSYHA 2647
            WN+RGLN   K   +   I  NN +   LVET V+ES    +   +   W    NY ++ 
Sbjct: 6    WNVRGLNKSSKHSVIKKWIEENNFQFGCLVETRVKESKVSQLVGKLFKDWSILTNYEHNR 65

Query: 2646 LGRIWLLWDPVSVKINFLFSSAQYI 2572
             GRIW+LW   +V+++ ++ S Q +
Sbjct: 66   RGRIWVLWRK-NVRLSPIYKSCQLL 89


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  249 bits (635), Expect(4) = e-139
 Identities = 148/443 (33%), Positives = 240/443 (54%)
 Frame = -2

Query: 2558 LFVRTFVYRYNSEELRDDLWYKISNFAGDNNLPWCILGDFNAYLFSHDKEGGAALTSANL 2379
            +F    VY  ++   R  LW ++ NF    + P  ++GD+NA   + D+  G  ++ A  
Sbjct: 102  MFKMAAVYGLHTIADRKVLWEELYNFVSVCHEPCILIGDYNAVYSAQDRLNGNDVSEAET 161

Query: 2378 YRFHACVQNSHLFVCPYVGCFYTWSNKQDVDARITCKLDRVLINMAWLDCFPDSVTDFLT 2199
                + V  + L   P  G FY+W+NK     RI+ ++D+  +N+AW++ +PD V ++  
Sbjct: 162  SDLRSFVLKAQLLEAPTTGLFYSWNNKSIGADRISSRIDKSFVNVAWINQYPDVVVEYRE 221

Query: 2198 CGISDHSLMVTSVFSGRGTVTKAYRYYNTWEEESDFLGVVAAAWNIKVQGTPMFIFVTKL 2019
             GISDHS ++ ++ +      + +++ N   +++ F+ VV  AW        M     +L
Sbjct: 222  AGISDHSPLIFNLATQHDEGGRPFKFLNFLADQNGFVEVVKEAWGSANHRFKMKNIWVRL 281

Query: 2018 *NVKKALIAWRKKRFTNFSTQVGVAKAHLANVQKELQVSPFCVDTIDAEREEVRDYAKKA 1839
              VK+AL ++  K+F+    QV   +  LA VQ   +VS    +  + E++ +    K +
Sbjct: 282  QAVKRALKSFHSKKFSKAHCQVEELRRKLAAVQALPEVSQVS-ELQEEEKDLIAQLRKWS 340

Query: 1838 RYEESMKKQQSRVRWMQLGDNNTPFFHNSIIERIARNRILVLYDVAGTKLTSDQDIAAEC 1659
              +ES+ KQ+SR++W+ LGD+N+ FF  +I  R ARN+I++L +  G +LT + +I  E 
Sbjct: 341  TIDESILKQKSRIQWLSLGDSNSKFFFTAIKVRKARNKIVLLQNDRGDQLTENTEIQNEI 400

Query: 1658 IAYYTNLFGQHSATPFDAQAWDQIELQHKVSEEEAISLTMPITNDEIILALSTIDSDKAP 1479
              +Y  L G  S++  +A     + +  K+S      L  PIT  EI  AL+ ID  KAP
Sbjct: 401  CNFYRRLLGT-SSSQLEAIDLHVVRVGAKLSATSCAQLVQPITIQEIDQALADIDDTKAP 459

Query: 1478 GPNGFSSHFFKCCWSVIGVDFIKEVKSCFASAKLLGEVNATLVSLIPKIPNASTFNDYRP 1299
            G +GF+S FFK  W VI  +  + +   F +  +   +N T V+LIPKI  A    DYRP
Sbjct: 460  GLDGFNSVFFKKSWLVIKQEIYEGILDFFENGFMHKPINCTAVTLIPKIDEAKHAKDYRP 519

Query: 1298 IACCNVIYKCISKILTIRLKHVV 1230
            IACC+ +YK ISKILT RL+ V+
Sbjct: 520  IACCSTLYKIISKILTKRLQAVI 542



 Score =  218 bits (554), Expect(4) = e-139
 Identities = 117/337 (34%), Positives = 179/337 (53%), Gaps = 1/337 (0%)
 Frame = -1

Query: 1242 QACCQELVSPCQSAFISRRSIQDNIMLAHELLRNYHRNNGARRCALKIDLRKAYDCIRWD 1063
            QA   E+V   Q+ FI  R I DNI+LA EL+R Y+R + + RC +K+D+RKAYD + W 
Sbjct: 539  QAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRHVSPRCVIKVDIRKAYDSVEWV 598

Query: 1062 ALLTTLDKFHIPQRFINWVSMCITAPKFSIMVNGSAYGYIEGKRGIRQGCPLSPYLFVLL 883
             L + L +   P  FI W+  C+    +SI++NG      + ++G+RQG PLSP+LF L 
Sbjct: 599  FLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQKGLRQGDPLSPFLFALS 658

Query: 882  MDVFNALMLKQVQLGFYSLHPRCKNPIVTHLCFADDLLVCMKGDVQSARSLSSTLTTFSN 703
            M+  +  M    +   ++ HP+C+   +THL FADDLL+  + D  S   + +   +FS 
Sbjct: 659  MEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLMFARADASSISKIMAAFNSFSK 718

Query: 702  RTGLEVNNRKSSIFISSVDATTSLSIQAMLRFEXXXXXXXXXXXXXLSSRLSHSDCVALI 523
             +GL+ +  KS I+   V    +  +   ++                S +L+ S C  LI
Sbjct: 719  ASGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPFRYLGVPLASKKLNFSQCKPLI 778

Query: 522  DHVIARIKSWKERSLSFAGRVLLNKVILSSMLIFWTSCFVLPKKTVNTLNAIFRNFLWSG 343
            D +  R + W    LS+AGR+ L K IL SM  +W   F LPKK +  +    R FLW+G
Sbjct: 779  DKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFPLPKKLIKAVETTCRKFLWTG 838

Query: 342  -IELTHKHPSVKWSFVCLPYKEGGLGIRCIEATNTAS 235
             ++ ++K P V W F+  P   GGL +  +   N A+
Sbjct: 839  TVDTSYKAP-VAWDFLQQPKSTGGLNVTNMVLWNKAA 874



 Score = 69.7 bits (169), Expect(4) = e-139
 Identities = 34/88 (38%), Positives = 48/88 (54%)
 Frame = -1

Query: 2835 IGCWNIRGLNDPLKQVEVSNLIRNNNIKICGLVETLVQESNKDIIRNNILPSWMYSDNYS 2656
            I  WN+RGLNDP+K  EV + + +  I +C L ET V++ N   I+      W + +NY+
Sbjct: 3    ITTWNVRGLNDPIKVKEVKHFLHSQKISLCSLFETRVRQQNSGKIQKKFGNRWSWINNYA 62

Query: 2655 YHALGRIWLLWDPVSVKINFLFSSAQYI 2572
                GRIW+ W    V IN L  + Q I
Sbjct: 63   CSPRGRIWVGWLNNDVNINVLSVTEQVI 90



 Score = 32.7 bits (73), Expect(4) = e-139
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = -2

Query: 227  KHIWDIVINKDTIWVQWVQQNLIKGKDFWLLKTLVDASRCWRRILDHREAASK 69
            K +W I   +D +WV+WV    IK ++   +    + S   R+I + RE  ++
Sbjct: 877  KLLWAITFKQDKLWVRWVNAYYIKRQNIENVTVSSNTSWILRKIFESRELLTR 929


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 893

 Score =  241 bits (614), Expect(3) = e-127
 Identities = 120/322 (37%), Positives = 193/322 (59%)
 Frame = -1

Query: 1227 ELVSPCQSAFISRRSIQDNIMLAHELLRNYHRNNGARRCALKIDLRKAYDCIRWDALLTT 1048
            E++SP QSAF+  R + +N++LA E++  Y+  N + R  LK+DLRKA+D +RWD +++ 
Sbjct: 551  EVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWDFIISA 610

Query: 1047 LDKFHIPQRFINWVSMCITAPKFSIMVNGSAYGYIEGKRGIRQGCPLSPYLFVLLMDVFN 868
                 +P++F+ W++ CI+ P FS+MVNGS+ G+ +  +G+RQG PLSPYLFVL M+VF+
Sbjct: 611  FRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFS 670

Query: 867  ALMLKQVQLGFYSLHPRCKNPIVTHLCFADDLLVCMKGDVQSARSLSSTLTTFSNRTGLE 688
            +L+  +   G+   HP+  +  ++HL FADD++V   G   S   +S  L  F++ +GL 
Sbjct: 671  SLLKARFDAGYIHYHPKTADLSISHLMFADDVMVFFDGGSSSLHGISEALDDFASWSGLH 730

Query: 687  VNNRKSSIFISSVDATTSLSIQAMLRFEXXXXXXXXXXXXXLSSRLSHSDCVALIDHVIA 508
            VN  K++++++  D   +L+I +   F              +S +L  S+       ++ 
Sbjct: 731  VNKDKTNLYLAGTDEVEALAI-SHYGFPISTLPIRYLGLPLMSRKLKISEY-----ELVK 784

Query: 507  RIKSWKERSLSFAGRVLLNKVILSSMLIFWTSCFVLPKKTVNTLNAIFRNFLWSGIELTH 328
            R +SW  +SLSFAGRV L   +++ ++ FW S FVL    V  + ++   FLWSG     
Sbjct: 785  RFRSWAVKSLSFAGRVQLITSVITGLVNFWMSTFVLLLGCVKKIESLCSRFLWSGSIDAS 844

Query: 327  KHPSVKWSFVCLPYKEGGLGIR 262
            K   + WS VCLP  EGG+G+R
Sbjct: 845  KGAKIAWSGVCLPKNEGGVGLR 866



 Score =  201 bits (511), Expect(3) = e-127
 Identities = 139/454 (30%), Positives = 224/454 (49%), Gaps = 12/454 (2%)
 Frame = -2

Query: 2555 FVRTFVYRYNSEELRDDLWYKISNFAGDNNL---PWCILGDFNAYLFSHDKEGGAALTSA 2385
            FV + VY  N E  R +LW ++   A    +    W +LGDFN  L  + +    A    
Sbjct: 104  FVVSIVYASNEEGTRKELWNELVQLALSPVVVGRSWIVLGDFNQIL--NPESAINANIGR 161

Query: 2384 NLYRFHACVQNSHLFVCPYVGCFYTWSNKQDVDARITCKLDRVLINMAWLDCFPDSVTDF 2205
             +  F +C+ +S L+   Y G  YTW NK      +  K+DR+L+N  W   FP +  +F
Sbjct: 162  KIRAFRSCLLDSDLYDLVYKGSSYTWWNKCS-SRPLAKKIDRILVNDHWNTLFPSAYANF 220

Query: 2204 LTCGISDHSLMVTSVFSGRGTVTKAYRYYNTWEEESDFLGVVAAAW-NIKVQGTPMFIFV 2028
                 SDHS     +        + +R++N +    DFL ++   W +  V G+ M+   
Sbjct: 221  GEPDFSDHSSCEVVLDPAVLKAKRPFRFFNYFLHNPDFLQLIRENWYSCNVSGSAMYRVS 280

Query: 2027 TKL*NVKKALIAWRKKRFTNFSTQVGVAKAHLANVQKELQVSPFCVDTIDAEREEVRDYA 1848
             KL ++K  +  + ++ +++   +V  A A + + Q+    +P  V     E E  R + 
Sbjct: 281  KKLKHLKLPICCFSRENYSDIEKRVSEAHAIVLHRQRITLTNPSVVHAT-LELEATRKWQ 339

Query: 1847 KKARYEESMKKQQSRVRWMQLGDNNTPFFHNSIIERIARNRILVLYDVAGTKLTSDQDIA 1668
              A+ EES   Q+S + W+  GDNNT +FH     R + N I  L D  G ++ + Q I 
Sbjct: 340  ILAKAEESFFCQKSSISWLYEGDNNTAYFHKMADMRKSINTINFLIDDFGERIETQQGIK 399

Query: 1667 AECIAYYTNLF--------GQHSATPFDAQAWDQIELQHKVSEEEAISLTMPITNDEIIL 1512
                 +  N F        G++S     AQ+   + L  + S ++   L    ++ +I  
Sbjct: 400  EGIKEHSCNFFESLLCGVEGENSL----AQSDMNLLLSFRCSVDQINDLERSFSDLDIQE 455

Query: 1511 ALSTIDSDKAPGPNGFSSHFFKCCWSVIGVDFIKEVKSCFASAKLLGEVNATLVSLIPKI 1332
            A  ++  +KA GP+G+SS FFK  W V+G +  + V+  F S +LL + NAT + LIPKI
Sbjct: 456  AFFSLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKI 515

Query: 1331 PNASTFNDYRPIACCNVIYKCISKILTIRLKHVV 1230
             N+S   D+RPI+C N +YK I+K+LT RLK ++
Sbjct: 516  TNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKLL 549



 Score = 65.5 bits (158), Expect(3) = e-127
 Identities = 32/86 (37%), Positives = 47/86 (54%)
 Frame = -1

Query: 2829 CWNIRGLNDPLKQVEVSNLIRNNNIKICGLVETLVQESNKDIIRNNILPSWMYSDNYSYH 2650
            CWN+RG N    +         N     GL+ET V++  +    +N+LP W + +NY + 
Sbjct: 7    CWNVRGFNISSHRRGFKKWFLLNKPLFGGLIETHVKQPKEKKFISNLLPGWSFVENYEFS 66

Query: 2649 ALGRIWLLWDPVSVKINFLFSSAQYI 2572
             LG+IW+LWDP SVK+  +  S Q I
Sbjct: 67   VLGKIWVLWDP-SVKVVVIGRSLQMI 91


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
            [Arabidopsis thaliana]
          Length = 893

 Score =  239 bits (609), Expect(3) = e-126
 Identities = 119/322 (36%), Positives = 192/322 (59%)
 Frame = -1

Query: 1227 ELVSPCQSAFISRRSIQDNIMLAHELLRNYHRNNGARRCALKIDLRKAYDCIRWDALLTT 1048
            E++SP QSAF+  R + +N++LA E++  Y+  N + R  LK+DLRKA+D +RWD +++ 
Sbjct: 551  EVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWDFIISA 610

Query: 1047 LDKFHIPQRFINWVSMCITAPKFSIMVNGSAYGYIEGKRGIRQGCPLSPYLFVLLMDVFN 868
                 +P++F+ W++ CI+ P FS+MVNGS+ G+ +  +G+RQG PLSPYLFVL M+VF+
Sbjct: 611  FRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFS 670

Query: 867  ALMLKQVQLGFYSLHPRCKNPIVTHLCFADDLLVCMKGDVQSARSLSSTLTTFSNRTGLE 688
            +L+  +   G+   HP+  +  ++HL FADD++V   G   S   +S  L  F++ +GL 
Sbjct: 671  SLLKARFDAGYIQYHPKTADLSISHLMFADDVMVFFDGGSSSLHGISEALDDFASWSGLH 730

Query: 687  VNNRKSSIFISSVDATTSLSIQAMLRFEXXXXXXXXXXXXXLSSRLSHSDCVALIDHVIA 508
            VN  K++++++  D   +L+I +   F              +S +L  S+       ++ 
Sbjct: 731  VNKDKTNLYLAGTDEVEALAI-SHYGFPISTLPIRYLGLPLMSRKLKISEY-----ELVK 784

Query: 507  RIKSWKERSLSFAGRVLLNKVILSSMLIFWTSCFVLPKKTVNTLNAIFRNFLWSGIELTH 328
            R +SW  +SLSFAGRV L   +++ ++ FW S FVL    V  + ++   FLWSG     
Sbjct: 785  RFRSWAVKSLSFAGRVQLITSVITGLVNFWMSTFVLLLGCVKKIESLCSRFLWSGSIDAS 844

Query: 327  KHPSVKWSFVCLPYKEGGLGIR 262
            K   + WS VCLP  EGG+ +R
Sbjct: 845  KGAKIAWSGVCLPKNEGGVALR 866



 Score =  201 bits (511), Expect(3) = e-126
 Identities = 139/454 (30%), Positives = 224/454 (49%), Gaps = 12/454 (2%)
 Frame = -2

Query: 2555 FVRTFVYRYNSEELRDDLWYKISNFAGDNNL---PWCILGDFNAYLFSHDKEGGAALTSA 2385
            FV + VY  N E  R +LW ++   A    +    W +LGDFN  L  + +    A    
Sbjct: 104  FVVSIVYASNEEGTRKELWNELVQLALSPVVVGRSWIVLGDFNQIL--NPESAINANIGR 161

Query: 2384 NLYRFHACVQNSHLFVCPYVGCFYTWSNKQDVDARITCKLDRVLINMAWLDCFPDSVTDF 2205
             +  F +C+ +S L+   Y G  YTW NK      +  K+DR+L+N  W   FP +  +F
Sbjct: 162  KIRAFRSCLLDSDLYDLVYKGSSYTWWNKCS-SRPLAKKIDRILVNDHWNTLFPSAYANF 220

Query: 2204 LTCGISDHSLMVTSVFSGRGTVTKAYRYYNTWEEESDFLGVVAAAW-NIKVQGTPMFIFV 2028
                 SDHS     +        + +R++N +    DFL ++   W +  V G+ M+   
Sbjct: 221  GEPDFSDHSSCEVVLDPAVLKAKRPFRFFNYFLHNPDFLQLIRENWYSCNVSGSAMYRVS 280

Query: 2027 TKL*NVKKALIAWRKKRFTNFSTQVGVAKAHLANVQKELQVSPFCVDTIDAEREEVRDYA 1848
             KL ++K  +  + ++ +++   +V  A A + + Q+    +P  V     E E  R + 
Sbjct: 281  KKLKHLKLPICCFSRENYSDIEKRVSEAHAIVLHRQRITLTNPSVVHAT-LELEATRKWQ 339

Query: 1847 KKARYEESMKKQQSRVRWMQLGDNNTPFFHNSIIERIARNRILVLYDVAGTKLTSDQDIA 1668
              A+ EES   Q+S + W+  GDNNT +FH     R + N I  L D  G ++ + Q I 
Sbjct: 340  ILAKAEESFFCQKSSISWLYEGDNNTAYFHKMADMRKSINTINFLIDDFGERIETQQGIK 399

Query: 1667 AECIAYYTNLF--------GQHSATPFDAQAWDQIELQHKVSEEEAISLTMPITNDEIIL 1512
                 +  N F        G++S     AQ+   + L  + S ++   L    ++ +I  
Sbjct: 400  EGIKEHSCNFFESLLCGVEGENSL----AQSDMNLLLSFRCSVDQINDLERSFSDLDIQE 455

Query: 1511 ALSTIDSDKAPGPNGFSSHFFKCCWSVIGVDFIKEVKSCFASAKLLGEVNATLVSLIPKI 1332
            A  ++  +KA GP+G+SS FFK  W V+G +  + V+  F S +LL + NAT + LIPKI
Sbjct: 456  AFFSLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKI 515

Query: 1331 PNASTFNDYRPIACCNVIYKCISKILTIRLKHVV 1230
             N+S   D+RPI+C N +YK I+K+LT RLK ++
Sbjct: 516  TNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKLL 549



 Score = 65.5 bits (158), Expect(3) = e-126
 Identities = 32/86 (37%), Positives = 47/86 (54%)
 Frame = -1

Query: 2829 CWNIRGLNDPLKQVEVSNLIRNNNIKICGLVETLVQESNKDIIRNNILPSWMYSDNYSYH 2650
            CWN+RG N    +         N     GL+ET V++  +    +N+LP W + +NY + 
Sbjct: 7    CWNVRGFNISSHRRGFKKWFLLNKPLFGGLIETHVKQPKEKKFISNLLPGWSFVENYEFS 66

Query: 2649 ALGRIWLLWDPVSVKINFLFSSAQYI 2572
             LG+IW+LWDP SVK+  +  S Q I
Sbjct: 67   VLGKIWVLWDP-SVKVVVIGRSLQMI 91


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score =  230 bits (587), Expect(3) = e-125
 Identities = 146/443 (32%), Positives = 219/443 (49%), Gaps = 5/443 (1%)
 Frame = -2

Query: 2552 VRTFVYRYNSEELRDDLWYKISNFAGDN---NLPWCILGDFNAYLFSHDKEGGAALTSAN 2382
            V +FVY    E  R  LW +I +F+ D    + PW +LGDFN  L   +           
Sbjct: 2    VLSFVYASTDEVTRQILWNEIVDFSNDPCVIDKPWTVLGDFNQILHPSEHSTSDGFNVDR 61

Query: 2381 LYR-FHACVQNSHLFVCPYVGCFYTWSNKQDVDARITCKLDRVLINMAWLDCFPDSVTDF 2205
              R F   +  + L    + G  +TW NK+   A +  KLDR+L+N  W   FP S+  F
Sbjct: 62   PTRIFRETILLASLTDLSFRGNTFTWWNKRS-RAPVAKKLDRILVNDKWTTTFPSSLGLF 120

Query: 2204 LTCGISDHSLMVTSVFSGRGTVTKAYRYYNTWEEESDFLGVVAAAW-NIKVQGTPMFIFV 2028
                 SDHS    S+ S      K +R+ N   ++ +FL ++   W +  V G+ M+   
Sbjct: 121  GEPDFSDHSSCELSLMSASPRSKKPFRFNNFLLKDENFLSLICLKWFSTSVTGSAMYRVS 180

Query: 2027 TKL*NVKKALIAWRKKRFTNFSTQVGVAKAHLANVQKELQVSPFCVDTIDAEREEVRDYA 1848
             KL  +KK +  + +  +++   +   A   L   Q  L  SP C      E E  R + 
Sbjct: 181  VKLKALKKVIRDFSRDNYSDIEKRTKEAHDALLLAQSVLLASP-CPSNAAIEAETQRKWR 239

Query: 1847 KKARYEESMKKQQSRVRWMQLGDNNTPFFHNSIIERIARNRILVLYDVAGTKLTSDQDIA 1668
              A  E S   Q+SRV W++ GD N+ +FH     R + N I  L D  G ++   Q++ 
Sbjct: 240  ILAEAEASFFYQRSRVNWLREGDMNSSYFHKMASARQSLNHIHFLSDPVGDRIEGQQNLE 299

Query: 1667 AECIAYYTNLFGQHSATPFDAQAWDQIELQHKVSEEEAISLTMPITNDEIILALSTIDSD 1488
              C+ Y+ +  G     P   QA     L ++ S  + +SL  P ++++I  A  ++  +
Sbjct: 300  NHCVEYFQSNLGSEQGLPLFEQADISNLLSYRCSPAQQVSLDTPFSSEQIKNAFFSLPRN 359

Query: 1487 KAPGPNGFSSHFFKCCWSVIGVDFIKEVKSCFASAKLLGEVNATLVSLIPKIPNASTFND 1308
            KA GP+GFS  FF  CW +IG +  + +   F S KLL + NAT + LIPKI NAS+ +D
Sbjct: 360  KASGPDGFSPEFFCACWPIIGGEVTEAIHEFFTSGKLLKQWNATNLVLIPKITNASSMSD 419

Query: 1307 YRPIACCNVIYKCISKILTIRLK 1239
            +RPI+C N +YK ISK+LT RLK
Sbjct: 420  FRPISCLNTVYKVISKLLTDRLK 442



 Score =  221 bits (563), Expect(3) = e-125
 Identities = 113/326 (34%), Positives = 186/326 (57%)
 Frame = -1

Query: 1221 VSPCQSAFISRRSIQDNIMLAHELLRNYHRNNGARRCALKIDLRKAYDCIRWDALLTTLD 1042
            +S  QSAF+  R   +N++LA EL+  Y++ N A    LK+DLRKA+D +RWD +++ L 
Sbjct: 449  ISHSQSAFMPGRLFLENVLLATELVHGYNKKNIAPSSMLKVDLRKAFDSVRWDFIVSALR 508

Query: 1041 KFHIPQRFINWVSMCITAPKFSIMVNGSAYGYIEGKRGIRQGCPLSPYLFVLLMDVFNAL 862
              ++P++F  W+  C++   FS+++NG + G+    +G+RQG P+SPYLFVL M+VF+ L
Sbjct: 509  ALNVPEKFTCWILECLSTASFSVILNGHSAGHFWSSKGLRQGDPMSPYLFVLAMEVFSGL 568

Query: 861  MLKQVQLGFYSLHPRCKNPIVTHLCFADDLLVCMKGDVQSARSLSSTLTTFSNRTGLEVN 682
            +  +   G+ + HP+     ++HL FADD+++   G   S   +  +L  F+  +GL +N
Sbjct: 569  LQSRYTSGYIAYHPKTSQLEISHLMFADDVMIFFDGKSSSLHGIVESLEDFAGWSGLLMN 628

Query: 681  NRKSSIFISSVDATTSLSIQAMLRFEXXXXXXXXXXXXXLSSRLSHSDCVALIDHVIARI 502
              K+ ++ + +  + S S+ A   F+             +S +L+ ++   LI+ + AR 
Sbjct: 629  TNKTQLYHAGLSQSESDSM-ASYGFKLGSLPVRYLGLPLMSRKLTIAEYAPLIEKITARF 687

Query: 501  KSWKERSLSFAGRVLLNKVILSSMLIFWTSCFVLPKKTVNTLNAIFRNFLWSGIELTHKH 322
             SW  R LSFAGRV L   ++S ++ FW S F+LP   +  + ++   FLWS        
Sbjct: 688  NSWVVRLLSFAGRVQLLASVISGIVNFWISSFILPLGCIKKIESLCSRFLWSSRIDKKGI 747

Query: 321  PSVKWSFVCLPYKEGGLGIRCIEATN 244
              V WS VCLP  EGG+G+R    +N
Sbjct: 748  AKVAWSQVCLPKAEGGIGLRRFAVSN 773



 Score = 49.7 bits (117), Expect(3) = e-125
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
 Frame = -2

Query: 221 IWDIVINKDTIWVQWVQQNLI-KGKDFWLLKTLVDASRCWRRILDHREAASKFVLHLIGN 45
           IW +  N  ++WV W +Q+ + K   FW        S  W+ +L  R  A +F+   +GN
Sbjct: 781 IWLLFSNSGSLWVAWHKQHSLGKSTSFWNQPEKPHDSWNWKCLLRLRVVAERFIRCNVGN 840

Query: 44  GRGTKLWKDRWLP 6
           GR    W D W P
Sbjct: 841 GRDASFWFDNWTP 853


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  261 bits (666), Expect(4) = e-124
 Identities = 129/329 (39%), Positives = 197/329 (59%)
 Frame = -1

Query: 1221 VSPCQSAFISRRSIQDNIMLAHELLRNYHRNNGARRCALKIDLRKAYDCIRWDALLTTLD 1042
            ++P QSAFI  R + +N++LA EL+++YH+ + + R ALKID+ KA+D ++W  L+  L 
Sbjct: 705  IAPNQSAFIKDRLMMENLLLASELVKDYHKESISSRSALKIDISKAFDFVQWPFLINVLK 764

Query: 1041 KFHIPQRFINWVSMCITAPKFSIMVNGSAYGYIEGKRGIRQGCPLSPYLFVLLMDVFNAL 862
              H+P+ FI+W+ +CI    FS+ VNG   G+   +RG+RQGC LSPYL+V+ M+V + +
Sbjct: 765  AIHLPEMFIHWIELCIGTASFSVQVNGELSGFFRSERGLRQGCSLSPYLYVICMNVLSCM 824

Query: 861  MLKQVQLGFYSLHPRCKNPIVTHLCFADDLLVCMKGDVQSARSLSSTLTTFSNRTGLEVN 682
            + K       S HPRC+N  +THLCFADD++V   G  +S +   +    F+  + L+++
Sbjct: 825  LDKAAVEKKISYHPRCRNMNLTHLCFADDIMVFSDGTSKSIQGTLAIFEKFAAMSWLKIS 884

Query: 681  NRKSSIFISSVDATTSLSIQAMLRFEXXXXXXXXXXXXXLSSRLSHSDCVALIDHVIARI 502
              KS+IF++ +      SI     FE             L+ R++ SD + L++ + ARI
Sbjct: 885  LEKSTIFMAGISPNAKTSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRARI 944

Query: 501  KSWKERSLSFAGRVLLNKVILSSMLIFWTSCFVLPKKTVNTLNAIFRNFLWSGIELTHKH 322
             SW  R LSFAGR+ L K +LSS+  FW S F LPK  +  +  +F  FLWSG +L  K 
Sbjct: 945  TSWTNRFLSFAGRLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTKK 1004

Query: 321  PSVKWSFVCLPYKEGGLGIRCIEATNTAS 235
              + WS VC   +EGGLG++ ++  N  S
Sbjct: 1005 AKIAWSEVCKLKEEGGLGLKPLKEANEVS 1033



 Score =  152 bits (384), Expect(4) = e-124
 Identities = 122/451 (27%), Positives = 179/451 (39%), Gaps = 9/451 (1%)
 Frame = -2

Query: 2555 FVRTFVYRYNSEELRDDLWYKISNFAG---DNNLPWCILGDFNAYLFSHDKEG--GAALT 2391
            F  +F+Y  N  + R +LW  + N        N  W ILGDFN  L   D      +   
Sbjct: 339  FFVSFIYASNYVDERRELWEDLRNHYDLPMFRNKGWMILGDFNEILDGEDHSNFVNSPFI 398

Query: 2390 SANLYRFHACVQNSHLFVCPYVGCFYTWSNKQDVDARITCKLDRVLINMAWLDCFPDSVT 2211
               +  F   V+   L    Y G  +TW NK++ +  +  KLDRVL+N  W   FP   +
Sbjct: 399  PQGMRDFQDVVRYCSLADMSYHGPVFTWCNKRE-EGLVNKKLDRVLVNEVWTRKFPAVYS 457

Query: 2210 DFLTCGISDHSLMVTSVFSGRGTVTKAYRYYNTWEEESDFLGVVAAAWNIKVQ----GTP 2043
             F   GISDH        SG       +++ N      +FL +V   W+  +      + 
Sbjct: 458  IFEAGGISDHLRCRIKFASGNTQPKGPFKFNNVLTTLPEFLQIVKDFWDGTLALFHPTSA 517

Query: 2042 MFIFVTKL*NVKKALIAWRKKRFTNFSTQVGVAKAHLANVQKELQVSPFCVDTIDAEREE 1863
            MF F  KL  +K  L +  +    N S +V  A   L                       
Sbjct: 518  MFRFSKKLKGLKPILKSLGRSTLHNLSVRVAEAYTSLY---------------------- 555

Query: 1862 VRDYAKKARYEESMKKQQSRVRWMQLGDNNTPFFHNSIIERIARNRILVLYDVAGTKLTS 1683
                      EE   +Q+S++ W+ +GD N  +FHNS+  R+A N I  +    G   TS
Sbjct: 556  ---------LEEGYLQQKSKLHWLDVGDKNNKYFHNSVKARVAMNSIREIQCTDGRVCTS 606

Query: 1682 DQDIAAECIAYYTNLFGQHSATPFDAQAWDQIELQHKVSEEEAISLTMPITNDEIILALS 1503
                                               H   +EEA                 
Sbjct: 607  -----------------------------------HDDIKEEA----------------- 614

Query: 1502 TIDSDKAPGPNGFSSHFFKCCWSVIGVDFIKEVKSCFASAKLLGEVNATLVSLIPKIPNA 1323
                 K+PGP+G++  FFK  W V+G D +  ++S F    L   +N T+++LI K    
Sbjct: 615  ----HKSPGPDGYTVEFFKTAWPVLGRDLVIAIQSFFLKGFLPKGINTTILALISKKHEV 670

Query: 1322 STFNDYRPIACCNVIYKCISKILTIRLKHVV 1230
            S   DYRPI+CCNV+YK +SK++  RLK ++
Sbjct: 671  SGMKDYRPISCCNVLYKIVSKLMANRLKEIL 701



 Score = 59.3 bits (142), Expect(4) = e-124
 Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
 Frame = -2

Query: 227  KHIWDIVINKDTIWVQWVQQNLIKGKDFWLLKTLVD-ASRCWRRILDHREAASKFVLHLI 51
            K IW I+  +D++WV+WV ++LI+ + FW +K      S  WR+IL  R+ A  F    +
Sbjct: 1036 KLIWRILSARDSLWVKWVNKHLIRKETFWSVKENTGLGSWLWRKILKQRDKARLFHRMEV 1095

Query: 50   GNGRGTKLWKDRWLP 6
             +G  T  W D W P
Sbjct: 1096 RSGTFTSFWHDHWCP 1110



 Score = 46.6 bits (109), Expect(4) = e-124
 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
 Frame = -1

Query: 2823 NIRGLNDPLKQVEVSNLIRNN-----------NIKICGLVETLVQESNKDIIRNNILPSW 2677
            N+  L +   + E +  +R N           ++   GL+ET V E+    I + +   W
Sbjct: 233  NVGALKNSAPETEKTGALRVNLPRSSKSSHKDSLTFGGLIETRVDENRASRIISKVFRDW 292

Query: 2676 MYSDNYSYHALGRIWLLWDPVSVKINFLFSSAQYI 2572
                NY +H LGRIW++W   +V++  ++ S Q I
Sbjct: 293  SSMTNYEHHRLGRIWVVWKN-TVRVTPVYKSGQLI 326


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  222 bits (566), Expect(3) = e-124
 Identities = 112/331 (33%), Positives = 182/331 (54%)
 Frame = -1

Query: 1227 ELVSPCQSAFISRRSIQDNIMLAHELLRNYHRNNGARRCALKIDLRKAYDCIRWDALLTT 1048
            E+V+  QS FI  R I DNI+LA EL+R Y R + + RC +K+D+RKAYD + W  L T 
Sbjct: 541  EVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDIRKAYDSVEWSFLETL 600

Query: 1047 LDKFHIPQRFINWVSMCITAPKFSIMVNGSAYGYIEGKRGIRQGCPLSPYLFVLLMDVFN 868
            L +F  P RF+ W+  C++   +S++VNG      + ++G+RQG P+SP+LF L M+  +
Sbjct: 601  LYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGLRQGDPMSPFLFALCMEYLS 660

Query: 867  ALMLKQVQLGFYSLHPRCKNPIVTHLCFADDLLVCMKGDVQSARSLSSTLTTFSNRTGLE 688
              + +      ++ HP+C+   +THL FADDLL+  + D  S   ++     FS+ +GL 
Sbjct: 661  RCLEELKGSPDFNFHPKCERLNITHLMFADDLLMFCRADKSSLDHMNVAFQKFSHASGLA 720

Query: 687  VNNRKSSIFISSVDATTSLSIQAMLRFEXXXXXXXXXXXXXLSSRLSHSDCVALIDHVIA 508
             ++ KS+I+   VD  T+  +   +  +              S +L+++ C  L++ +  
Sbjct: 721  ASHEKSNIYFCGVDDETARELADYVHMQLGELPFRYLGVPLTSKKLTYAQCKPLVEMITN 780

Query: 507  RIKSWKERSLSFAGRVLLNKVILSSMLIFWTSCFVLPKKTVNTLNAIFRNFLWSGIELTH 328
            R ++W  + LS+AGR+ L K ILSSM  +W   F L KK +  +  + R FLW+G     
Sbjct: 781  RAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIFPLSKKVIQAVEKVCRKFLWTGKTEET 840

Query: 327  KHPSVKWSFVCLPYKEGGLGIRCIEATNTAS 235
            K   V W+ +  P   GG  +  ++  N A+
Sbjct: 841  KKAPVAWATIQRPKSRGGWNVINMKYWNRAA 871



 Score =  201 bits (511), Expect(3) = e-124
 Identities = 131/444 (29%), Positives = 223/444 (50%), Gaps = 7/444 (1%)
 Frame = -2

Query: 2540 VYRYNSEELRDDLWYKISNFAGDNNLPWCILGDFNAYLFSHDKEGGAALTSANLYRFHAC 2361
            VY  ++   R  LW  +       + P  I+GDFNA   S+D+  G  +T A    F   
Sbjct: 106  VYGLHTIADRKSLWSGLLQCVQQQD-PMIIIGDFNAVCHSNDRLYGTLVTDAETEDFQQF 164

Query: 2360 VQNSHLFVCPYVGCFYTWSNKQDVDARITCKLDRVLINMAWLDCFPDSVTDFLTCGISDH 2181
            +  S+L        +Y+WSN      R+  ++D+  +N+ WL  + +    +L  GISDH
Sbjct: 165  LLQSNLIESRSTWSYYSWSNSSIGRDRVLSRIDKAYVNLVWLGMYAEVSVQYLPPGISDH 224

Query: 2180 SLMVTSVFSGRGTVTKAYRYYNTWEEESDFLGVVAAAWNIKVQGTPMFIFVTKL*NVKKA 2001
            S ++ ++ +GR    K +++ N   E+ +FL  V  AWN  V G   F       N+K  
Sbjct: 225  SPLLFNLMTGRPQGGKPFKFMNVMAEQGEFLETVEKAWN-SVNGR--FKLQAIWLNLKAV 281

Query: 2000 LIAWRKKRFTNFSTQ-VGVAKAHLANVQKELQ--VSPFCVDTIDAEREEVRDYAKKARY- 1833
                 K+      TQ +G+A   + N++ +LQ   S    D  D  + + +      R+ 
Sbjct: 282  -----KRELKQMKTQKIGLAHEKVKNLRHQLQDLQSQDDFDHNDIMQTDAKSIMNDLRHW 336

Query: 1832 ---EESMKKQQSRVRWMQLGDNNTPFFHNSIIERIARNRILVLYDVAGTKLTSDQDIAAE 1662
               E+S+ +Q+SR+ W+Q GD N+  F  ++  R A NRI +L    G  +    ++  E
Sbjct: 337  SHIEDSILQQKSRITWLQQGDTNSKLFFTAVKARHAINRIDMLNTEDGRVIQDADEVQEE 396

Query: 1661 CIAYYTNLFGQHSATPFDAQAWDQIELQHKVSEEEAISLTMPITNDEIILALSTIDSDKA 1482
             + +Y  L G  ++T       + +     +S +   SL   + + EI  AL+ I +DKA
Sbjct: 397  ILEFYKKLLGTRASTLMGVDL-NTVRGGKCLSAQAKESLIREVASTEIDEALAGIGNDKA 455

Query: 1481 PGPNGFSSHFFKCCWSVIGVDFIKEVKSCFASAKLLGEVNATLVSLIPKIPNASTFNDYR 1302
            PG +GF+++FFK  W  I  +    ++  F ++++   +N  +V+L+PK+ +A+   ++R
Sbjct: 456  PGLDGFNAYFFKKSWGSIKQEIYAGIQEFFNNSRMHRPINCIVVTLLPKVQHATRVKEFR 515

Query: 1301 PIACCNVIYKCISKILTIRLKHVV 1230
            PIACC VIYK ISK+LT R+K ++
Sbjct: 516  PIACCTVIYKIISKMLTNRMKGII 539



 Score = 73.2 bits (178), Expect(3) = e-124
 Identities = 30/83 (36%), Positives = 48/83 (57%)
 Frame = -1

Query: 2826 WNIRGLNDPLKQVEVSNLIRNNNIKICGLVETLVQESNKDIIRNNILPSWMYSDNYSYHA 2647
            WN+RG+NDP K  E+ N + ++ I +C L+ET V+E N   ++  +   W + +NYS+ A
Sbjct: 6    WNVRGMNDPFKIKEIKNFLYSHKIVVCALLETRVREQNASKVQGKLGKDWKWLNNYSHSA 65

Query: 2646 LGRIWLLWDPVSVKINFLFSSAQ 2578
              RIW+ W P  V +    +  Q
Sbjct: 66   RERIWIGWRPAWVNVTLTHTQEQ 88


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  236 bits (602), Expect(3) = e-120
 Identities = 118/327 (36%), Positives = 187/327 (57%)
 Frame = -1

Query: 1242 QACCQELVSPCQSAFISRRSIQDNIMLAHELLRNYHRNNGARRCALKIDLRKAYDCIRWD 1063
            Q     ++   QSAF+  RS+ +N++LA E++  Y+R N + R  LK+DL+KA+D ++W+
Sbjct: 405  QGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWE 464

Query: 1062 ALLTTLDKFHIPQRFINWVSMCITAPKFSIMVNGSAYGYIEGKRGIRQGCPLSPYLFVLL 883
             +   L    IP+R+INW+  CIT P F+I VNG+  G+    +G+RQG PLSPYLFVL 
Sbjct: 465  FVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLA 524

Query: 882  MDVFNALMLKQVQLGFYSLHPRCKNPIVTHLCFADDLLVCMKGDVQSARSLSSTLTTFSN 703
            M+VF+ L+  +   G+   HP+  +  ++HL FADD+++   G   S   +  TL  F++
Sbjct: 525  MEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFAD 584

Query: 702  RTGLEVNNRKSSIFISSVDATTSLSIQAMLRFEXXXXXXXXXXXXXLSSRLSHSDCVALI 523
             +GL+VN  KS +F + +D +  ++  A   F              +  +L  +D   L+
Sbjct: 585  WSGLKVNKDKSQLFQAGLDLSERIT-SAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLL 643

Query: 522  DHVIARIKSWKERSLSFAGRVLLNKVILSSMLIFWTSCFVLPKKTVNTLNAIFRNFLWSG 343
            + + AR++SW  ++LSFAGR  L   ++  ++ FW S F+LPK  +  + ++   FLW+G
Sbjct: 644  EKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAG 703

Query: 342  IELTHKHPSVKWSFVCLPYKEGGLGIR 262
                 K   V W   CLP  EGGLG R
Sbjct: 704  SIDGRKSSKVSWVDCCLPKSEGGLGFR 730



 Score =  199 bits (505), Expect(3) = e-120
 Identities = 130/413 (31%), Positives = 203/413 (49%), Gaps = 3/413 (0%)
 Frame = -2

Query: 2453 ILGDFNAYLFSHDKEGGAALTSANLYR-FHACVQNSHLFVCPYVGCFYTWSNKQDVDARI 2277
            +LGDFN  L   +     +L      R F +C+    L    + G  +TW NK  +   I
Sbjct: 1    MLGDFNQVLLPQEHSNPPSLNIDRRMRDFGSCLSEMELSDLVFKGNSFTWWNKSSIRP-I 59

Query: 2276 TCKLDRVLINMAWLDCFPDSVTDFLTCGISDHSLMVTSVFSGRGTVTKAYRYYNTWEEES 2097
              KLDR+L N +W + +P S   F     SDH      + +   +  + ++++N   +  
Sbjct: 60   AKKLDRILANDSWCNLYPSSHGLFGNLDFSDHVSCGVVLEANGISAKRPFKFFNFLLKNE 119

Query: 2096 DFLGVVAAAW-NIKVQGTPMFIFVTKL*NVKKALIAWRKKRFTNFSTQVGVAKAHLANVQ 1920
            DFL VV   W +  V G+ M+    KL  +KK +  + +  ++    +   A   L   Q
Sbjct: 120  DFLNVVMDNWFSTNVVGSSMYRVSKKLKAMKKPIKDFSRLNYSGIELRTKEAHELLITCQ 179

Query: 1919 KELQVSPFCVDTIDAEREEVRDYAKKARYEESMKKQQSRVRWMQLGDNNTPFFHNSIIER 1740
                 +P  V     E E  R +   +  EES   Q+SRV W   GD+NT +FH  +  R
Sbjct: 180  NLTLANP-SVSNAALELEAQRKWVLLSCAEESFFHQRSRVSWFAEGDSNTHYFHRMVDSR 238

Query: 1739 IARNRILVLYDVAGTKLTSDQDIAAECIAYYTNLFGQHSATPFDAQAWDQ-IELQHKVSE 1563
             + N I  L D  G  + S Q I   C+ YY  L G   + PF  +  D  + L ++ S+
Sbjct: 239  KSFNTINSLVDSNGLLIDSQQGILDHCVTYYERLLGSIES-PFSMEQEDMNLLLTYRCSQ 297

Query: 1562 EEAISLTMPITNDEIILALSTIDSDKAPGPNGFSSHFFKCCWSVIGVDFIKEVKSCFASA 1383
            ++   L    T+DEI  A  ++  +K  GP+G+S  FF+  WS+IG + +  +   F S 
Sbjct: 298  DQCSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSG 357

Query: 1382 KLLGEVNATLVSLIPKIPNASTFNDYRPIACCNVIYKCISKILTIRLKHVVKS 1224
            +LL + NAT + LIPK  NA T +++RPI+C N +YK ISK+LT RL+ ++ +
Sbjct: 358  QLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSA 410



 Score = 48.1 bits (113), Expect(3) = e-120
 Identities = 20/70 (28%), Positives = 32/70 (45%)
 Frame = -2

Query: 221 IWDIVINKDTIWVQWVQQNLIKGKDFWLLKTLVDASRCWRRILDHREAASKFVLHLIGNG 42
           IW +     ++W QW + + +    FW +  L      W+ +L+ R  A KF+   +GNG
Sbjct: 744 IWVLFDRDTSLWAQWQRHHRLGHASFWQVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNG 803

Query: 41  RGTKLWKDRW 12
                W D W
Sbjct: 804 GTVSFWFDCW 813


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  236 bits (602), Expect(3) = e-120
 Identities = 118/327 (36%), Positives = 187/327 (57%)
 Frame = -1

Query: 1242 QACCQELVSPCQSAFISRRSIQDNIMLAHELLRNYHRNNGARRCALKIDLRKAYDCIRWD 1063
            Q     ++   QSAF+  RS+ +N++LA E++  Y+R N + R  LK+DL+KA+D ++W+
Sbjct: 405  QGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWE 464

Query: 1062 ALLTTLDKFHIPQRFINWVSMCITAPKFSIMVNGSAYGYIEGKRGIRQGCPLSPYLFVLL 883
             +   L    IP+R+INW+  CIT P F+I VNG+  G+    +G+RQG PLSPYLFVL 
Sbjct: 465  FVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLA 524

Query: 882  MDVFNALMLKQVQLGFYSLHPRCKNPIVTHLCFADDLLVCMKGDVQSARSLSSTLTTFSN 703
            M+VF+ L+  +   G+   HP+  +  ++HL FADD+++   G   S   +  TL  F++
Sbjct: 525  MEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFAD 584

Query: 702  RTGLEVNNRKSSIFISSVDATTSLSIQAMLRFEXXXXXXXXXXXXXLSSRLSHSDCVALI 523
             +GL+VN  KS +F + +D +  ++  A   F              +  +L  +D   L+
Sbjct: 585  WSGLKVNKDKSQLFQAGLDLSERIT-SAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLL 643

Query: 522  DHVIARIKSWKERSLSFAGRVLLNKVILSSMLIFWTSCFVLPKKTVNTLNAIFRNFLWSG 343
            + + AR++SW  ++LSFAGR  L   ++  ++ FW S F+LPK  +  + ++   FLW+G
Sbjct: 644  EKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAG 703

Query: 342  IELTHKHPSVKWSFVCLPYKEGGLGIR 262
                 K   V W   CLP  EGGLG R
Sbjct: 704  SIDGRKSSKVSWVDCCLPKSEGGLGFR 730



 Score =  199 bits (505), Expect(3) = e-120
 Identities = 130/413 (31%), Positives = 203/413 (49%), Gaps = 3/413 (0%)
 Frame = -2

Query: 2453 ILGDFNAYLFSHDKEGGAALTSANLYR-FHACVQNSHLFVCPYVGCFYTWSNKQDVDARI 2277
            +LGDFN  L   +     +L      R F +C+    L    + G  +TW NK  +   I
Sbjct: 1    MLGDFNQVLLPQEHSNPPSLNIDRRMRDFGSCLSEMELSDLVFKGNSFTWWNKSSIRP-I 59

Query: 2276 TCKLDRVLINMAWLDCFPDSVTDFLTCGISDHSLMVTSVFSGRGTVTKAYRYYNTWEEES 2097
              KLDR+L N +W + +P S   F     SDH      + +   +  + ++++N   +  
Sbjct: 60   AKKLDRILANDSWCNLYPSSHGLFGNLDFSDHVSCGVVLEANGISAKRPFKFFNFLLKNE 119

Query: 2096 DFLGVVAAAW-NIKVQGTPMFIFVTKL*NVKKALIAWRKKRFTNFSTQVGVAKAHLANVQ 1920
            DFL VV   W +  V G+ M+    KL  +KK +  + +  ++    +   A   L   Q
Sbjct: 120  DFLNVVMDNWFSTNVVGSSMYRVSKKLKAMKKPIKDFSRLNYSGIELRTKEAHELLITCQ 179

Query: 1919 KELQVSPFCVDTIDAEREEVRDYAKKARYEESMKKQQSRVRWMQLGDNNTPFFHNSIIER 1740
                 +P  V     E E  R +   +  EES   Q+SRV W   GD+NT +FH  +  R
Sbjct: 180  NLTLANP-SVSNAALELEAQRKWVLLSCAEESFFHQRSRVSWFAEGDSNTHYFHRMVDSR 238

Query: 1739 IARNRILVLYDVAGTKLTSDQDIAAECIAYYTNLFGQHSATPFDAQAWDQ-IELQHKVSE 1563
             + N I  L D  G  + S Q I   C+ YY  L G   + PF  +  D  + L ++ S+
Sbjct: 239  KSFNTINSLVDSNGLLIDSQQGILDHCVTYYERLLGSIES-PFSMEQEDMNLLLTYRCSQ 297

Query: 1562 EEAISLTMPITNDEIILALSTIDSDKAPGPNGFSSHFFKCCWSVIGVDFIKEVKSCFASA 1383
            ++   L    T+DEI  A  ++  +K  GP+G+S  FF+  WS+IG + +  +   F S 
Sbjct: 298  DQCSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSG 357

Query: 1382 KLLGEVNATLVSLIPKIPNASTFNDYRPIACCNVIYKCISKILTIRLKHVVKS 1224
            +LL + NAT + LIPK  NA T +++RPI+C N +YK ISK+LT RL+ ++ +
Sbjct: 358  QLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSA 410



 Score = 48.1 bits (113), Expect(3) = e-120
 Identities = 20/70 (28%), Positives = 32/70 (45%)
 Frame = -2

Query: 221 IWDIVINKDTIWVQWVQQNLIKGKDFWLLKTLVDASRCWRRILDHREAASKFVLHLIGNG 42
           IW +     ++W QW + + +    FW +  L      W+ +L+ R  A KF+   +GNG
Sbjct: 744 IWVLFDRDTSLWAQWQRHHRLGHASFWQVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNG 803

Query: 41  RGTKLWKDRW 12
                W D W
Sbjct: 804 GTVSFWFDCW 813


>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
            thaliana]
          Length = 1253

 Score =  248 bits (633), Expect(2) = e-119
 Identities = 127/334 (38%), Positives = 193/334 (57%)
 Frame = -1

Query: 1242 QACCQELVSPCQSAFISRRSIQDNIMLAHELLRNYHRNNGARRCALKIDLRKAYDCIRWD 1063
            Q    +++SP QSAF+  R + +N++LA EL++ Y+R N   R  LK+DLRKA+D IRWD
Sbjct: 498  QCLLSQVISPFQSAFLPGRFLAENVLLATELVQGYNRQNIDPRGMLKVDLRKAFDSIRWD 557

Query: 1062 ALLTTLDKFHIPQRFINWVSMCITAPKFSIMVNGSAYGYIEGKRGIRQGCPLSPYLFVLL 883
             +++ L    IP RF+ W++ CI+ P FS+ VNG+  G+ +  RG+RQG PLSP+LFVL 
Sbjct: 558  FIISALKAIGIPDRFVYWITQCISTPTFSVCVNGNTGGFFKSTRGLRQGNPLSPFLFVLA 617

Query: 882  MDVFNALMLKQVQLGFYSLHPRCKNPIVTHLCFADDLLVCMKGDVQSARSLSSTLTTFSN 703
            M+VF++L+  + Q G+   HP+     ++HL FADD++V   G   S   +S  L  F+ 
Sbjct: 618  MEVFSSLLNSRFQAGYIHYHPKTSPLSISHLMFADDIMVFFDGGSSSLHGISEALEDFAF 677

Query: 702  RTGLEVNNRKSSIFISSVDATTSLSIQAMLRFEXXXXXXXXXXXXXLSSRLSHSDCVALI 523
             +GL +N  K+ ++++ +D   + +I   LR                      ++   L+
Sbjct: 678  WSGLVLNREKTHLYLAGLDRIEASTIARKLRI---------------------AEYGPLL 716

Query: 522  DHVIARIKSWKERSLSFAGRVLLNKVILSSMLIFWTSCFVLPKKTVNTLNAIFRNFLWSG 343
            + +  R +SW  + LSFAGRV L   ++S ++ FW S F+LPK  V  + A+   FLWSG
Sbjct: 717  EKLAKRFRSWSVKCLSFAGRVQLIASVISGIINFWISTFILPKGCVKRIEALCARFLWSG 776

Query: 342  IELTHKHPSVKWSFVCLPYKEGGLGIRCIEATNT 241
                 K   V WS VCLP +EGG+G+R     NT
Sbjct: 777  NIDVKKGAKVAWSEVCLPKEEGGVGLRRFTVLNT 810



 Score =  211 bits (536), Expect(2) = e-119
 Identities = 145/455 (31%), Positives = 216/455 (47%), Gaps = 9/455 (1%)
 Frame = -2

Query: 2576 TFLLGPLFVRTFVYRYNSEELRDDLWYKI---SNFAGDNNLPWCILGDFNAYLFSHDKEG 2406
            T  L    V + VY  N    R +LW ++   S     N  PW +LGDFN  L   +   
Sbjct: 46   TEFLDDSVVVSIVYAANEAITRKELWEELLLLSVSLSGNGKPWIMLGDFNQVLCPAEHSQ 105

Query: 2405 GAALT-SANLYRFHACVQNSHLFVCPYVGCFYTWSNKQDVDARITCKLDRVLINMAWLDC 2229
              +L  +  +  F  C+  + L    + G  +TW NK      +  KLDR+L+N +W   
Sbjct: 106  ATSLNVNRRMKVFRDCLFEAELCDLVFKGNTFTWWNKS-ATRPVAKKLDRILVNESWCSR 164

Query: 2228 FPDSVTDFLTCGISDHSLMVTSVFSGRGTVTKAYRYYNTWEEESDFLGVVAAAW-NIKVQ 2052
            FP +   F     SDH+     +        + +R+YN   +  DF+ +V   W +I V 
Sbjct: 165  FPSAYAVFGEPDFSDHASCGVIINPLMHREKRPFRFYNFLLQNPDFISLVGELWYSINVV 224

Query: 2051 GTPMFIFVTKL*NVKKALIAWRKKRFTNFSTQVGVAKAHLANVQKELQVSPFCVDTIDAE 1872
            G+ MF    KL  +K  +  +  + F+N   +V  A  +L   ++   +S   +     E
Sbjct: 225  GSSMFKMSKKLKALKNPIRTFSMENFSNLEKRVKEAH-NLVLYRQNKTLSDPTIPNAALE 283

Query: 1871 REEVRDYAKKARYEESMKKQQSRVRWMQLGDNNTPFFHNSIIERIARNRILVLYDVAGTK 1692
             E  R +    + EES   Q+SRV WM  GD+NT +FH     R A N I ++ D  G K
Sbjct: 284  MEAQRKWLILVKAEESFFCQRSRVTWMGEGDSNTSYFHRMADSRKAVNTIHIIIDDNGVK 343

Query: 1691 LTSDQDIAAECIAYYTNLFGQHSATPFDAQAWDQIELQHKVSEEEAISLTMPITNDEIIL 1512
            + +   I   CI Y++NL G     P   Q    + L  + S ++   L M  +  +I  
Sbjct: 344  IDTQLGIKEHCIEYFSNLLGGEVGPPMLIQEDFDLLLPFRCSHDQKKELAMSFSRQDIKS 403

Query: 1511 ALSTIDSDKAPGPNGFSSHFFKCCWSVIGVDFIKEVKSCFASAKLLGEVNATLVSLIPKI 1332
            A  +  S+K  GP+GF   FFK  WSVIG +    V   F S+ LL + NAT + LIPKI
Sbjct: 404  AFFSFPSNKTSGPDGFPVEFFKETWSVIGTEVTDAVSEFFTSSVLLKQWNATTLVLIPKI 463

Query: 1331 PNASTFNDYRPIACCN----VIYKCISKILTIRLK 1239
             NAS  ND+RPI+C +     +YK I+++LT RL+
Sbjct: 464  TNASKMNDFRPISCNDFGPITLYKVIARLLTNRLQ 498


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
            72.31) [Arabidopsis thaliana]
          Length = 928

 Score =  238 bits (607), Expect(2) = e-118
 Identities = 115/310 (37%), Positives = 183/310 (59%)
 Frame = -1

Query: 1209 QSAFISRRSIQDNIMLAHELLRNYHRNNGARRCALKIDLRKAYDCIRWDALLTTLDKFHI 1030
            QSAF+  R + +N++LA E++++YH+++ + RCALKID+ KA+D ++W  L+  L+  + 
Sbjct: 450  QSAFVKDRLLIENVLLATEIVKDYHKDSVSSRCALKIDISKAFDSVQWKFLINVLEAMNF 509

Query: 1029 PQRFINWVSMCITAPKFSIMVNGSAYGYIEGKRGIRQGCPLSPYLFVLLMDVFNALMLKQ 850
            P  F +W+++CIT   FS+ VNG   G     R +RQGC LSPYLFV+ MDV + ++ K 
Sbjct: 510  PPEFTHWITLCITTASFSVQVNGELAGVFSSARELRQGCSLSPYLFVISMDVLSKMLDKA 569

Query: 849  VQLGFYSLHPRCKNPIVTHLCFADDLLVCMKGDVQSARSLSSTLTTFSNRTGLEVNNRKS 670
            V    +  HP+C+   +THL FADDL++   G V+S   +   L  F+  +GL+++  KS
Sbjct: 570  VGARQFGYHPKCRAIGLTHLSFADDLMILSDGKVRSIDGIVKVLYEFAKWSGLKISMEKS 629

Query: 669  SIFISSVDATTSLSIQAMLRFEXXXXXXXXXXXXXLSSRLSHSDCVALIDHVIARIKSWK 490
            +++++ V A+    I     F+             +S RL+ SDC+ LI+ +  +I++W 
Sbjct: 630  TMYLAGVQASVYQEIVQKFSFDVGKLPVRYLGLPLVSKRLTASDCLPLIEQLRKKIEAWT 689

Query: 489  ERSLSFAGRVLLNKVILSSMLIFWTSCFVLPKKTVNTLNAIFRNFLWSGIELTHKHPSVK 310
             R LSFAGR+ L    L S+  FW + F LP+  +  ++ +   FLWSG EL+     V 
Sbjct: 690  SRFLSFAGRLNLISSTLWSICNFWMAAFRLPRACIREIDKLCSAFLWSGTELSSNKAKVS 749

Query: 309  WSFVCLPYKE 280
            W  +C P KE
Sbjct: 750  WEAICKPKKE 759



 Score =  218 bits (554), Expect(2) = e-118
 Identities = 142/449 (31%), Positives = 227/449 (50%), Gaps = 14/449 (3%)
 Frame = -2

Query: 2519 ELRDDLWYKISNFAGD---NNLPWCILGDFNAYLF--SHDKEGGAALTSANLYRFHACVQ 2355
            E R +LW  + + +      + PW I GDFN  L    H       +T+  +  F   V 
Sbjct: 2    EERKELWNDLRDHSDSPIIRSKPWIIFGDFNEILDMEEHSNSRENPVTTTGMRDFQMAVN 61

Query: 2354 NSHLFVCPYVGCFYTWSNKQDVDARITCKLDRVLINMAWLDCFPDSVTDFLTCGISDHSL 2175
            +  +    Y G  +TWSNK++ D  I  KLDRVL+N  WL  FP S + F   G SDH  
Sbjct: 62   HCSITDLAYHGPLFTWSNKRENDL-IAKKLDRVLVNDVWLQSFPRSYSVFEAGGCSDHLR 120

Query: 2174 MVTSVFSGRGTVTKA---YRYYNTWEEESDFLGVVAAAWN----IKVQGTPMFIFVTKL* 2016
               ++  G G V K    +++ N   E   F+  V + WN    I +  + +F F  KL 
Sbjct: 121  CRINLNVGAGAVVKGKRPFKFVNVITEMEHFIPTVESYWNETEAIFMSTSSLFRFSKKLK 180

Query: 2015 NVKKALIAWRKKRFTNFSTQVGVAKAHLANVQKELQVSPFCVDTIDAEREEVRDYAKKAR 1836
             +K  L    K+R  N   Q   A   L   Q     +P    ++  E E    +   A 
Sbjct: 181  GLKPLLRNLGKERLGNLVKQTKEAFETLCQKQAMKMANP-SPSSMQEENEAYAKWDHIAV 239

Query: 1835 YEESMKKQQSRVRWMQLGDNNTPFFHNSIIERIARNRILVLYDVAGTKLTSDQDIAAECI 1656
             EE   KQ+S++ W+ +GD N   FH +++ R A+N I  +    G+  + ++ I  E  
Sbjct: 240  LEEKFLKQRSKLHWLDIGDRNNKAFHRAVVAREAQNSIREIICHDGSVASQEEKIKTEAE 299

Query: 1655 AYYTNLFGQHSATPFDAQAWDQIE--LQHKVSEEEAISLTMPITNDEIILALSTIDSDKA 1482
             ++   F Q     F+  A ++++  L ++ S+ +   LT  ++ +EI   + ++ +DK+
Sbjct: 300  HHFRE-FLQLIPNDFEGIAVEELQDLLPYRCSDSDKEMLTNHVSAEEIHKVVFSMPNDKS 358

Query: 1481 PGPNGFSSHFFKCCWSVIGVDFIKEVKSCFASAKLLGEVNATLVSLIPKIPNASTFNDYR 1302
            PGP+G+++ F+K  W++IG +FI  ++S FA   L   +N+T+++LIPK   A    DYR
Sbjct: 359  PGPDGYTAEFYKGAWNIIGAEFILAIQSFFAKGFLPKGINSTILALIPKKKEAKEMKDYR 418

Query: 1301 PIACCNVIYKCISKILTIRLKHVVKSWLV 1215
            PI+CCNV+YK ISKI+  RLK V+  ++V
Sbjct: 419  PISCCNVLYKVISKIIANRLKLVLPKFIV 447


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score =  261 bits (666), Expect(4) = e-117
 Identities = 129/328 (39%), Positives = 198/328 (60%)
 Frame = -1

Query: 1227 ELVSPCQSAFISRRSIQDNIMLAHELLRNYHRNNGARRCALKIDLRKAYDCIRWDALLTT 1048
            E ++P QSAFIS R + +N++LA EL+++YH++  + RCA+KIDL KA+D ++W  LL T
Sbjct: 822  EFIAPNQSAFISDRLLMENLLLASELVKDYHKDGLSPRCAMKIDLSKAFDSVQWPFLLNT 881

Query: 1047 LDKFHIPQRFINWVSMCITAPKFSIMVNGSAYGYIEGKRGIRQGCPLSPYLFVLLMDVFN 868
            L    IP++FI+W+++CI+   FS+ VNG           +RQGC LSPYLFV+ M+V +
Sbjct: 882  LAALDIPEKFIHWINLCISTASFSVQVNG-----------LRQGCSLSPYLFVICMNVLS 930

Query: 867  ALMLKQVQLGFYSLHPRCKNPIVTHLCFADDLLVCMKGDVQSARSLSSTLTTFSNRTGLE 688
            A++ K      +  HPRC+N  +THLCFADD++V   G   S   + +    F+  +GL 
Sbjct: 931  AMLDKGAVEKRFGYHPRCRNMGLTHLCFADDIMVFSAGSAHSLEGVLAIFKDFAAFSGLN 990

Query: 687  VNNRKSSIFISSVDATTSLSIQAMLRFEXXXXXXXXXXXXXLSSRLSHSDCVALIDHVIA 508
            ++  KS++F++S+ + T  SI A   F+             ++ R++ +DC+ L++ + +
Sbjct: 991  ISLEKSTLFMASISSETCASILARFPFDSGSLPVRYLGLPLMTKRMTLADCLPLLEKIRS 1050

Query: 507  RIKSWKERSLSFAGRVLLNKVILSSMLIFWTSCFVLPKKTVNTLNAIFRNFLWSGIELTH 328
            RI SWK R LS+AGR+ L   ++SS+  FW S F LP+  +  +  I   FLWSG +L  
Sbjct: 1051 RISSWKNRFLSYAGRLQLLNSVISSLTKFWISAFRLPRACIREIEQISAAFLWSGTDLNP 1110

Query: 327  KHPSVKWSFVCLPYKEGGLGIRCIEATN 244
                V W  VC P  EGGLG+R +   N
Sbjct: 1111 HKAKVAWHDVCKPKSEGGLGLRSLVDAN 1138



 Score =  153 bits (386), Expect(4) = e-117
 Identities = 126/460 (27%), Positives = 204/460 (44%), Gaps = 14/460 (3%)
 Frame = -2

Query: 2555 FVRTFVYRYNSEELRDDLW---YKISNFAGDNNLPWCILGDFNAYLF--SHDKEGGAALT 2391
            F+ +F+Y  N  E R  LW   + + N     N PW + GDFN  L    H     + + 
Sbjct: 404  FICSFIYASNFVEERKKLWQDLHNLQNSVAFRNKPWLLFGDFNETLKMEEHSSYAVSPMV 463

Query: 2390 SANLYRFHACVQNSHLFVCPYVGCFYTWSNKQDVDARITCKLDRVLINMAWLDCFPDSVT 2211
            +  +  F   V+   L      G  +TW NK++ +  I  KLDRVL+N  +   +P S  
Sbjct: 464  TPGMRDFQIVVRYCSLEDMRTHGPLFTWGNKRN-EGLICKKLDRVLLNPEYNSAYPHSYC 522

Query: 2210 DFLTCGISDHSLMVTSVFSGRGTVTKA---YRYYNTWEEESDFLGVVAAAWNIKVQGTP- 2043
               + G SDH   +   F  R  + K    +++ N      +F+  V   W    +  P 
Sbjct: 523  IMDSGGCSDH---LRGRFHLRSAIQKPKGPFKFTNVIAAHPEFMPKVEDFWKNTTELFPS 579

Query: 2042 ---MFIFVTKL*NVKKALIAWRKKRFTNFSTQVGVAKAHLANVQKELQVSPFCVDTIDAE 1872
               +F F  KL  +K  L    +   ++ + +   A   L   Q +   +    D +D  
Sbjct: 580  TSTLFRFSKKLKELKPILKDLSRNNLSDLTRRATYAYEELCRCQTKSLTTLNPHDIVD-- 637

Query: 1871 REEVRDYAKKARYEESMKKQQSRVRWMQLGDNNTPFFHNSIIERIARNRILVLYDVAGTK 1692
                          ES+  +    RW +              ER   N I  + D  GT+
Sbjct: 638  --------------ESLAFE----RWEK--------------ERHLLNAIHEVMDPQGTR 665

Query: 1691 LTSDQDIAAECIAYYTNLFGQHSATPFDAQAWDQIE--LQHKVSEEEAISLTMPITNDEI 1518
              +  DI  E + ++++L     +  F   + D+++  LQ++ S  E   L   IT  E+
Sbjct: 666  PPNQDDIKIEAVRFFSDLLSSQPSD-FTGISVDELKGILQYRYSLHEQNLLVAEITEAEV 724

Query: 1517 ILALSTIDSDKAPGPNGFSSHFFKCCWSVIGVDFIKEVKSCFASAKLLGEVNATLVSLIP 1338
            +    +I  +K+PGP+G++  FF+  WSVIG +    +KS F    L   +N+T+++LIP
Sbjct: 725  MKVFFSIPLNKSPGPDGYTVEFFRETWSVIGQEVTMAIKSFFTYGFLPKGLNSTILALIP 784

Query: 1337 KIPNASTFNDYRPIACCNVIYKCISKILTIRLKHVVKSWL 1218
            K   A    DYRPI+CCNV+YK ISK+L  RLK ++  ++
Sbjct: 785  KRTYAKEMKDYRPISCCNVLYKAISKLLANRLKCLLPEFI 824



 Score = 45.4 bits (106), Expect(4) = e-117
 Identities = 21/57 (36%), Positives = 33/57 (57%)
 Frame = -1

Query: 2742 LVETLVQESNKDIIRNNILPSWMYSDNYSYHALGRIWLLWDPVSVKINFLFSSAQYI 2572
            ++ET V ES   +I   +   W    NY ++ LGRIW++W   SV++  +F S+Q I
Sbjct: 336  VLETRVIESKVPVIFAKVFKDWQMVSNYEFNRLGRIWVVWSS-SVQLQVIFKSSQMI 391



 Score = 35.4 bits (80), Expect(4) = e-117
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -2

Query: 230  FKHIWDIVINKDTIWVQWVQQNLIK 156
            FK IW +V  K ++WV W+Q NLI+
Sbjct: 1143 FKLIWRLVSAKHSLWVNWIQNNLIR 1167


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score =  253 bits (647), Expect(3) = e-111
 Identities = 125/325 (38%), Positives = 189/325 (58%)
 Frame = -1

Query: 1209 QSAFISRRSIQDNIMLAHELLRNYHRNNGARRCALKIDLRKAYDCIRWDALLTTLDKFHI 1030
            QSAF+  R + +N++LA EL+++YH+++ + RCA+KID+ KA+D ++W  L   L   + 
Sbjct: 283  QSAFVKDRLLIENVLLATELVKDYHKDSISTRCAMKIDISKAFDSLQWSFLTHVLAAMNF 342

Query: 1029 PQRFINWVSMCITAPKFSIMVNGSAYGYIEGKRGIRQGCPLSPYLFVLLMDVFNALMLKQ 850
            P  FI+W+S+C++   FSI VNG   GY    RG+RQGC LSPYLFV+ MDV + ++ K 
Sbjct: 343  PGEFIHWISLCMSTASFSIQVNGELAGYFRSARGLRQGCSLSPYLFVISMDVLSRMLDKA 402

Query: 849  VQLGFYSLHPRCKNPIVTHLCFADDLLVCMKGDVQSARSLSSTLTTFSNRTGLEVNNRKS 670
                 +  HPRCK   +THLCFADDL++   G ++S   +   L  F+ + GL++   K+
Sbjct: 403  AGAREFGYHPRCKTLGLTHLCFADDLMILTDGKIRSVDGIVKVLNQFAAKLGLKICMEKT 462

Query: 669  SIFISSVDATTSLSIQAMLRFEXXXXXXXXXXXXXLSSRLSHSDCVALIDHVIARIKSWK 490
            +++++ V   +   + +   F              ++ RL+ SD   LID +  RI  W 
Sbjct: 463  TLYLAGVSDHSRQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTSDYSPLIDQIRRRIGMWT 522

Query: 489  ERSLSFAGRVLLNKVILSSMLIFWTSCFVLPKKTVNTLNAIFRNFLWSGIELTHKHPSVK 310
             R LSFAGR+ L   +L S+  FW + F LP++ +N +N I    LWSG EL  K   V 
Sbjct: 523  SRYLSFAGRLSLINSVLWSITNFWMNAFRLPRECINEINRISSALLWSGPELNPKKAKVS 582

Query: 309  WSFVCLPYKEGGLGIRCIEATNTAS 235
            W  +C P KEGGLG++ +   N  S
Sbjct: 583  WDEICKPKKEGGLGLQSLREANKVS 607



 Score =  137 bits (344), Expect(3) = e-111
 Identities = 80/223 (35%), Positives = 124/223 (55%), Gaps = 4/223 (1%)
 Frame = -2

Query: 1871 REEVRDYAKK--ARYEESMKKQQSRVRWMQLGDNNTPFFHNSIIERIARNRILVLYDVAG 1698
            R+   D+  +  A   +S  K+ S      +GD N   FH +I  R A N I  +    G
Sbjct: 59   RQRFMDFVDRVLALQGDSPNKKFSLKCQTDVGDRNNKTFHRAITTREAVNSIREIVTRDG 118

Query: 1697 TKLTSDQDIAAECIAYYTNLFGQHSATPFDAQAWDQIE--LQHKVSEEEAISLTMPITND 1524
              +TS QDI  E + Y+ + F Q     ++    +++E  L  + SE++   LT  +T +
Sbjct: 119  LVVTSQQDIQTEAVNYFQD-FLQTIPADYEGMCVEELENLLPFRCSEDDHRLLTRVVTGE 177

Query: 1523 EIILALSTIDSDKAPGPNGFSSHFFKCCWSVIGVDFIKEVKSCFASAKLLGEVNATLVSL 1344
            EI   + ++  DK+PGP+G++S F+K  W +IG + I  ++S FA   L   VN+T+++L
Sbjct: 178  EIKKVIFSMPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLPKGVNSTILAL 237

Query: 1343 IPKIPNASTFNDYRPIACCNVIYKCISKILTIRLKHVVKSWLV 1215
            IPK   A    DYRPI+CCNV+YK ISKIL  RLK ++  ++V
Sbjct: 238  IPKKKEAREIKDYRPISCCNVLYKAISKILANRLKRILPKFIV 280



 Score = 65.1 bits (157), Expect(3) = e-111
 Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
 Frame = -2

Query: 233 NFKHIWDIVINKDTIWVQWVQQNLIKGKDFWLLKT-LVDASRCWRRILDHREAASKFVLH 57
           + K IW ++  +D++WV+W + NL+K + FW + T     S  WRR+L HRE A  F   
Sbjct: 608 SLKLIWRLLSCQDSLWVKWTRMNLLKKESFWSIGTHSTLGSWIWRRLLKHREVAKSFCKI 667

Query: 56  LIGNGRGTKLWKDRW 12
            + NG  T  W D W
Sbjct: 668 EVNNGVNTSFWFDNW 682


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  244 bits (624), Expect(3) = e-110
 Identities = 119/325 (36%), Positives = 189/325 (58%)
 Frame = -1

Query: 1209 QSAFISRRSIQDNIMLAHELLRNYHRNNGARRCALKIDLRKAYDCIRWDALLTTLDKFHI 1030
            QSAF+  R + +N++LA EL+++YH+ +   RCA+KID+ KA+D ++W  LL TL+  + 
Sbjct: 859  QSAFVKERLLMENVLLATELVKDYHKESVTPRCAMKIDISKAFDSVQWQFLLNTLEALNF 918

Query: 1029 PQRFINWVSMCITAPKFSIMVNGSAYGYIEGKRGIRQGCPLSPYLFVLLMDVFNALMLKQ 850
            P+ F +W+ +CI+   FS+ VNG   G+    RG+RQGC LSPYLFV+ M+V + ++ + 
Sbjct: 919  PETFRHWIKLCISTATFSVQVNGELAGFFGSSRGLRQGCALSPYLFVICMNVLSHMIDEA 978

Query: 849  VQLGFYSLHPRCKNPIVTHLCFADDLLVCMKGDVQSARSLSSTLTTFSNRTGLEVNNRKS 670
                    HP+C+   +THLCFADDL+V + G   S   + +    F+ R+GL+++  KS
Sbjct: 979  AVHRNIGYHPKCEKIGLTHLCFADDLMVFVDGHQWSIEGVINVFKEFAGRSGLQISLEKS 1038

Query: 669  SIFISSVDATTSLSIQAMLRFEXXXXXXXXXXXXXLSSRLSHSDCVALIDHVIARIKSWK 490
            +I+++ V A+  +   +   F              L+ +++ +D   LI+ V  +I SW 
Sbjct: 1039 TIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADYSPLIEAVKTKISSWT 1098

Query: 489  ERSLSFAGRVLLNKVILSSMLIFWTSCFVLPKKTVNTLNAIFRNFLWSGIELTHKHPSVK 310
             RSLS+AGR+ L   ++ S+  FW S + LP   +  +  +   FLWSG  L  K   + 
Sbjct: 1099 ARSLSYAGRLALLNSVIVSIANFWMSAYRLPAGCIREIEKLCSAFLWSGPVLNPKKAKIA 1158

Query: 309  WSFVCLPYKEGGLGIRCIEATNTAS 235
            WS +C P KEGGLGI+ +   N  S
Sbjct: 1159 WSSICQPKKEGGLGIKSLAEANKVS 1183



 Score =  160 bits (406), Expect(3) = e-110
 Identities = 132/462 (28%), Positives = 199/462 (43%), Gaps = 8/462 (1%)
 Frame = -2

Query: 2555 FVRTFVYRYNSEELRDDLWYKISNFAGD---NNLPWCILGDFNAYLFSHDKEGGAALTSA 2385
            F  +F+Y  N  E R  LW  I +        N PW + GDFN  L     EGG      
Sbjct: 463  FFCSFIYASNFVEERRILWEDIRSHHDSPLIRNKPWILCGDFNEIL-----EGGE----- 512

Query: 2384 NLYRFHACVQNSHLFVCPYVGCFYTWSNKQDVDARITCKLDRVLINMAWLDCFPDSVTDF 2205
                 H+   NS     PY                                  P  + DF
Sbjct: 513  -----HSNYDNS-----PYT---------------------------------PPGMRDF 529

Query: 2204 LTCGISDHSLMVTSVFSGRGTVTKAYRYYNTWEEESDFLGVVAAAWN----IKVQGTPMF 2037
               G     LM+ +  +G     K +++ N   +   FL VV + W     + V  + ++
Sbjct: 530  QEIG----RLMLEAAATGG---RKPFKFVNVLTKLPQFLPVVESHWASSAPLYVSTSALY 582

Query: 2036 IFVTKL*NVKKALIAWRKKRFTNFSTQVGVAKAHLANVQKELQVSPFCVDTIDAEREEVR 1857
             F  KL  +K  L    K++  +   +   A   L   Q     +P   +TI  E +   
Sbjct: 583  RFSKKLKTLKPHLRELGKEKLGDLPKRTREAHILLCEKQATTLANP-SQETIAEELKAYT 641

Query: 1856 DYAKKARYEESMKKQQSRVRWMQLGDNNTPFFHNSIIERIARNRILVLYDVAGTKLTSDQ 1677
            D+   +  EE   KQ+S++ WM +GD N  +FH +   R  RN I  +       L + +
Sbjct: 642  DWTHLSELEEGFLKQKSKLHWMNVGDGNNSYFHKAAQVRKMRNSIREIRGPNAETLQTSE 701

Query: 1676 DIAAECIAYYTNLFGQHSATPFDAQAWDQIELQ-HKVSEEEAISLTMPITNDEIILALST 1500
            +I  E   ++     + S         D   L  ++ S  +   LT  +T +EI   L  
Sbjct: 702  EIKGEAERFFNEFLNRQSGDFHGISVEDLRNLMSYRCSVTDQNILTREVTGEEIQKVLFA 761

Query: 1499 IDSDKAPGPNGFSSHFFKCCWSVIGVDFIKEVKSCFASAKLLGEVNATLVSLIPKIPNAS 1320
            + ++K+PGP+G++S FFK  WS+ G DFI  ++S F    L   +NAT+++LIPK   A 
Sbjct: 762  MPNNKSPGPDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLPKGLNATILALIPKKDEAI 821

Query: 1319 TFNDYRPIACCNVIYKCISKILTIRLKHVVKSWLVLANPPSF 1194
               DYRPI+CCNV+YK ISKIL  RLK ++ S+ +L N  +F
Sbjct: 822  EMKDYRPISCCNVLYKVISKILANRLKLLLPSF-ILQNQSAF 862



 Score = 46.2 bits (108), Expect(3) = e-110
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = -2

Query: 227  KHIWDIVINKDTIWVQWVQQNLIKGKDFWLLKTLVD-ASRCWRRILDHREAASKFVLHLI 51
            K IW ++  + ++WV W+   +I+   FW         S  W+++L +RE A       +
Sbjct: 1186 KLIWRLLSTQPSLWVTWIWTFIIRKGTFWSANERSSLGSWMWKKLLKYRELAKSMHKVEV 1245

Query: 50   GNGRGTKLWKDRW 12
             NG  T  W D W
Sbjct: 1246 RNGSSTSFWYDHW 1258


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score =  259 bits (663), Expect(3) = e-110
 Identities = 130/330 (39%), Positives = 192/330 (58%), Gaps = 1/330 (0%)
 Frame = -1

Query: 1224 LVSPCQSAFISRRSIQDNIMLAHELLRNYHRNNGARRCALKIDLRKAYDCIRWDALLTTL 1045
            +V P QS FI  R I DNI+LA E++ +YH+ +G  RC   +D+ KA D + WD ++ TL
Sbjct: 378  IVGPSQSTFIPGRRIGDNILLAQEIICDYHKADGQPRCTFMVDMMKANDTVEWDFIIATL 437

Query: 1044 DKFHIPQRFINWVSMCITAPKFSIMVNGSAYGYIEGKRGIRQGCPLSPYLFVLLMDVFNA 865
              F+IP   I W+  CI++ KFS+ VNG   G+   +RG+RQG PLSPYLFV+ M+V + 
Sbjct: 438  QAFNIPSTLIGWIKSCISSAKFSVCVNGELAGFFARRRGLRQGDPLSPYLFVIAMEVLSL 497

Query: 864  LMLKQVQLG-FYSLHPRCKNPIVTHLCFADDLLVCMKGDVQSARSLSSTLTTFSNRTGLE 688
             + +++     +  H RC    ++HLCFADDLL+   GD  S R+L    + F + + L+
Sbjct: 498  CIQRRINCSPCFRYHWRCDQLNLSHLCFADDLLMFCNGDENSVRTLHDAFSNFESLSSLK 557

Query: 687  VNNRKSSIFISSVDATTSLSIQAMLRFEXXXXXXXXXXXXXLSSRLSHSDCVALIDHVIA 508
             N  +S IF++ VD  +S S+  +  F              ++S+L   DC  L+D +  
Sbjct: 558  ANVSESKIFLAGVDGNSSDSVLQVTNFSLGTCPVRYLGIPLITSKLRMQDCSPLLDRIET 617

Query: 507  RIKSWKERSLSFAGRVLLNKVILSSMLIFWTSCFVLPKKTVNTLNAIFRNFLWSGIELTH 328
            RIKSW+ + LSFAGR+ L + +LSS+ ++W S  +LPKK +  +    R FLW+G     
Sbjct: 618  RIKSWENKVLSFAGRLQLIQSVLSSIQVYWASHLILPKKVLKDIEKRLRCFLWAGNCSGR 677

Query: 327  KHPSVKWSFVCLPYKEGGLGIRCIEATNTA 238
                V WS +CLP  EGGLGI+ +   N A
Sbjct: 678  AATKVAWSEICLPKCEGGLGIKDLHCWNKA 707



 Score =  123 bits (308), Expect(3) = e-110
 Identities = 102/406 (25%), Positives = 160/406 (39%), Gaps = 1/406 (0%)
 Frame = -2

Query: 2453 ILGDFNAYLFSHDKEGGAALTSANLYRFHACVQNSHLFVCPYVGCFYTWSNKQDVDARIT 2274
            ++GDFN      +  GG +  +  +  F++C+ NS L    Y                  
Sbjct: 95   VIGDFNVTRRCEETIGGNSRFTNAMDEFNSCLHNSKLDDLNY------------------ 136

Query: 2273 CKLDRVLINMAWLDCFPDSVTDFLTCGISDHSLMVTSVFSGRGTVTKAYRYYNTWEEESD 2094
                              SV  FL  GISDH+ MV  V          ++++N   +  D
Sbjct: 137  ------------------SVLSFLPPGISDHAAMVVKVGLPFRIRKAPFKFFNFLADRED 178

Query: 2093 FLGVVAAAWNIKVQGTPMFIFVTKL*NVKKALIAWRKKRFTNFSTQVGVAKAHLANVQKE 1914
            F+ +V+A W   V G+  F               WRK +                N  K 
Sbjct: 179  FIPIVSAVWATNVWGSKQFQ-------------VWRKLKLVK-------------NQFKL 212

Query: 1913 LQVSPFCVDTIDAEREEVRDYAKKARYEESMKKQQSRVRWMQLGDNNTPFFHNSIIERIA 1734
            L  +                        E + K++SRV+W++ GD N+ FF  ++ +   
Sbjct: 213  LNCNVV----------------------EKLLKKKSRVQWLKKGDKNSTFFFKTMTKHRN 250

Query: 1733 RNRILVLYDVAGTKLTSDQDIAAECIAYYTNLFGQHSATPFDAQAWDQIELQHKVSEEEA 1554
            RNRI  +    G  L                                            A
Sbjct: 251  RNRIATINRSDGPDL--------------------------------------------A 266

Query: 1553 ISLTMPITNDEIILALSTIDSDKAPGPNGFSSHFFKCCWSVIGVDFIKE-VKSCFASAKL 1377
             SL    T+D+I     +++ +K+PGP+GF+  FF+  W VIG + +   VK  F+   L
Sbjct: 267  KSLCNEFTHDDIRAVFFSMNPNKSPGPDGFNGCFFQKAWLVIGDNVVAAAVKEFFSYGSL 326

Query: 1376 LGEVNATLVSLIPKIPNASTFNDYRPIACCNVIYKCISKILTIRLK 1239
            L E+N+T+++L+PK+ N +T +D+RPI+CCN  YK I+K+L  RLK
Sbjct: 327  LMELNSTIITLVPKVANPTTMSDFRPISCCNTFYKIIAKLLANRLK 372



 Score = 68.9 bits (167), Expect(3) = e-110
 Identities = 29/73 (39%), Positives = 40/73 (54%)
 Frame = -2

Query: 224 HIWDIVINKDTIWVQWVQQNLIKGKDFWLLKTLVDASRCWRRILDHREAASKFVLHLIGN 45
           HIW++V +    W  WV+  L+KG  FW        S  WR++L  RE    F +++IG+
Sbjct: 712 HIWNLVSSSSNFWTDWVKVYLLKGNSFWNAPLPSICSWNWRKLLKIRELCCSFFVNIIGD 771

Query: 44  GRGTKLWKDRWLP 6
           GR T LW D W P
Sbjct: 772 GRATSLWFDNWHP 784


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score =  194 bits (494), Expect(4) = e-108
 Identities = 130/439 (29%), Positives = 197/439 (44%)
 Frame = -2

Query: 2555 FVRTFVYRYNSEELRDDLWYKISNFAGDNNLPWCILGDFNAYLFSHDKEGGAALTSANLY 2376
            FV  F+Y    +E +   W ++  +    + P+ ILGDFN      DK GGA  +S+  Y
Sbjct: 105  FVAIFIYAPAQKEFKSSFWDELIAYVSSLSFPFIILGDFNEINSPSDKLGGAPFSSSRAY 164

Query: 2375 RFHACVQNSHLFVCPYVGCFYTWSNKQDVDARITCKLDRVLINMAWLDCFPDSVTDFLTC 2196
                           + G  +TW  K+D    I  +LDR + + +WL  FP +       
Sbjct: 165  YMQNLFSQVDCTEISFTGQIFTWRKKKDGPNNIHERLDRGVASTSWLMLFPHAFLKHHIF 224

Query: 2195 GISDHSLMVTSVFSGRGTVTKAYRYYNTWEEESDFLGVVAAAWNIKVQGTPMFIFVTKL* 2016
              SDH  +     +   +    +R+   W    D+  +V   W  K  G+ MF FV K  
Sbjct: 225  TSSDHCQISLEYLANNKSKAPPFRFEKMWCTRKDYDSLVKRTWCTKFYGSHMFNFVQKCK 284

Query: 2015 NVKKALIAWRKKRFTNFSTQVGVAKAHLANVQKELQVSPFCVDTIDAEREEVRDYAKKAR 1836
             VK     W K +F N   Q+      L  +Q+ L +          +   +    K   
Sbjct: 285  LVKINSKEWNKTQFGNIFRQLRQVDERLEEIQRNLLIDHNNTSLKTQQELFLAKRNKLLE 344

Query: 1835 YEESMKKQQSRVRWMQLGDNNTPFFHNSIIERIARNRILVLYDVAGTKLTSDQDIAAECI 1656
            Y  +  KQ+ +  +M LGD N+ F+H     R  RN+I          +T    I  E  
Sbjct: 345  YNTTYWKQKCKSDFMVLGDTNSKFYHTHASIRKYRNQIKEFIPDNAQPITQPDLIEKEIT 404

Query: 1655 AYYTNLFGQHSATPFDAQAWDQIELQHKVSEEEAISLTMPITNDEIILALSTIDSDKAPG 1476
              +   F  + A  F+ Q  D   L   VSE +   LT  ++ +EI  A+  +  DK+PG
Sbjct: 405  LAFKKRFISNPACKFN-QNVDFNLLSPIVSEADNAYLTSAVSPEEIKNAVFDLAPDKSPG 463

Query: 1475 PNGFSSHFFKCCWSVIGVDFIKEVKSCFASAKLLGEVNATLVSLIPKIPNASTFNDYRPI 1296
            P+GF  +FF+  W++IG    + V++ F S  +L EVN T ++LIPK+      N +RPI
Sbjct: 464  PDGFPPYFFQKYWTLIGKSVCRAVQAFFHSGYMLKEVNHTFLALIPKVDKPVNANHFRPI 523

Query: 1295 ACCNVIYKCISKILTIRLK 1239
            + C+ IYK ISKI+T RLK
Sbjct: 524  SLCSTIYKVISKIITNRLK 542



 Score =  174 bits (442), Expect(4) = e-108
 Identities = 107/337 (31%), Positives = 164/337 (48%), Gaps = 7/337 (2%)
 Frame = -1

Query: 1227 ELVSPCQSAFISRRSIQDNIMLAHELLRNYHRNNGARR-CALKIDLRKAYDCIRWDALLT 1051
            +++ P Q AFI  R IQDNI++AHE+  ++    G     A+K+D+ KAYD + W  + T
Sbjct: 547  KIIHPLQGAFIPERLIQDNILIAHEVFHSFKNKTGRGGWIAIKLDMEKAYDRLEWKYIYT 606

Query: 1050 TLDKFHIPQRFINWVSMCITAPKFSIMVNGSAYGYIEGKRGIRQGCPLSPYLFVLLMDVF 871
            T+DK      +I W+  CI++  FS++VNG         RGIRQG PLSPYLF+L  ++ 
Sbjct: 607  TMDKMGFSPIWIEWIRSCISSASFSVLVNGIPGERFFPSRGIRQGDPLSPYLFILCAELL 666

Query: 870  NALMLKQVQ-----LGFYSLHPRCKNPIVTHLCFADDLLVCMKGDVQSARSLSSTLTTFS 706
                 K        +G      R + P +T   FADD ++  K    S   +   L  + 
Sbjct: 667  AREFSKACHEPGKLIGVPIGRTRTRIPFLT---FADDTMIFAKATEASCHKIRQILDKYC 723

Query: 705  NRTGLEVNNRKSSIFIS-SVDATTSLSIQAMLRFEXXXXXXXXXXXXXLSSRLSHSDCVA 529
              +G  VN  KS+   S +V     ++  ++L  +             ++SR++      
Sbjct: 724  LMSGQLVNYHKSAFQCSPNVRDIDKVNFASILGMQESSELGDYLGCPIINSRVTKETFAG 783

Query: 528  LIDHVIARIKSWKERSLSFAGRVLLNKVILSSMLIFWTSCFVLPKKTVNTLNAIFRNFLW 349
            +I   + ++  WK  SLS AGR +L +  L+S   F    F LPKK + TL+  +RNF W
Sbjct: 784  VISKTVQQLPKWKANSLSQAGRTVLIQSNLASKASFQMQSFTLPKKVLTTLDTTYRNFFW 843

Query: 348  SGIELTHKHPSVKWSFVCLPYKEGGLGIRCIEATNTA 238
            +          + W+ +C P   GG+G R  E TN A
Sbjct: 844  NKDPAAKSANFIGWNKICQPKSVGGVGFRKAEVTNIA 880



 Score = 60.5 bits (145), Expect(4) = e-108
 Identities = 28/75 (37%), Positives = 44/75 (58%)
 Frame = -2

Query: 227  KHIWDIVINKDTIWVQWVQQNLIKGKDFWLLKTLVDASRCWRRILDHREAASKFVLHLIG 48
            K +W I+++KD IWV+ V Q  +K ++  + K   +AS  W+ +L HR   SK +  LIG
Sbjct: 884  KLLWKIMVSKDNIWVKLVTQKYLKEQNLLVCKIPSNASWQWKNLLRHRNFFSKGLRWLIG 943

Query: 47   NGRGTKLWKDRWLPQ 3
            +G+    W D W+ Q
Sbjct: 944  DGQDISFWTDNWIFQ 958



 Score = 36.6 bits (83), Expect(4) = e-108
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
 Frame = -1

Query: 2838 NIGCWNIRGLNDPLKQVEVSNLIRNNNIKICGLVETLVQE-------SNKDIIRNNILPS 2680
            +I  WN+RG        E S+  +NNNIKI  L ET  Q        S    + ++ +P+
Sbjct: 2    SIAFWNVRGGCRKNVMEECSDFCKNNNIKILMLCETKSQSPPSQLAVSAAGFLHHDSIPA 61

Query: 2679 WMYSDNYSYHALGRIWLLW-----DPVSVKINFLFSSAQYI 2572
              YS        G +WL W     +P S+ +  ++ S ++I
Sbjct: 62   MGYS--------GGLWLFWRDCILNPFSLVV--IYKSVRFI 92


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  251 bits (640), Expect(3) = e-102
 Identities = 120/325 (36%), Positives = 190/325 (58%)
 Frame = -1

Query: 1209 QSAFISRRSIQDNIMLAHELLRNYHRNNGARRCALKIDLRKAYDCIRWDALLTTLDKFHI 1030
            QSAF+  R + +N++LA EL+++YH+++ + RCA+KID+ KA+D ++W  L  TL   + 
Sbjct: 209  QSAFVKDRLLIENLLLATELVKDYHKDSISARCAIKIDISKAFDSVQWSFLTNTLVAMNF 268

Query: 1029 PQRFINWVSMCITAPKFSIMVNGSAYGYIEGKRGIRQGCPLSPYLFVLLMDVFNALMLKQ 850
               FI+W+++CIT   FS+ VNG   GY + KRG+RQGC LSPYLFV+ MDV + ++ K 
Sbjct: 269  SPTFIHWINLCITTASFSVQVNGDLVGYFQSKRGLRQGCSLSPYLFVICMDVLSKMLDKA 328

Query: 849  VQLGFYSLHPRCKNPIVTHLCFADDLLVCMKGDVQSARSLSSTLTTFSNRTGLEVNNRKS 670
              +  +  HP+C+   +THL FADDL+V   G  +S   +      F  R+GL ++  KS
Sbjct: 329  AGVRKFGFHPKCQRLGLTHLSFADDLMVLSDGKTRSIEGILEVFDEFCKRSGLRISLEKS 388

Query: 669  SIFISSVDATTSLSIQAMLRFEXXXXXXXXXXXXXLSSRLSHSDCVALIDHVIARIKSWK 490
            +++++ V       I A   F+             ++ RL+ +D   L++ +  RI +W 
Sbjct: 389  TLYMAGVSPIIKQEIAAKFLFDVGQLPVRYLGLPLVTKRLTSADYSPLLEQIKKRIATWT 448

Query: 489  ERSLSFAGRVLLNKVILSSMLIFWTSCFVLPKKTVNTLNAIFRNFLWSGIELTHKHPSVK 310
             R  SFAGR  L K +L S+  FW + F LP++ +  ++ +  +FLWSG E++     + 
Sbjct: 449  FRFFSFAGRFNLIKSVLWSICNFWLAAFRLPRQCIREIDKLCSSFLWSGSEMSSHKAKIS 508

Query: 309  WSFVCLPYKEGGLGIRCIEATNTAS 235
            W  VC P  EGGLG+R ++  N  S
Sbjct: 509  WDIVCKPKAEGGLGLRNLKEANDVS 533



 Score =  110 bits (276), Expect(3) = e-102
 Identities = 64/177 (36%), Positives = 99/177 (55%), Gaps = 2/177 (1%)
 Frame = -2

Query: 1763 FHNSIIERIARNRILVLYDVAGTKLTSDQDIAAECIAYYTNLFGQHSATPFDAQAWDQIE 1584
            FH ++IER  +N I  +Y   G  +  D DI  E   ++   F Q     F      +++
Sbjct: 24   FHRAVIERETKNMIKEIYCTDGRVVQGD-DIMVEAEKFFKE-FLQLIPEDFVGVEVRELQ 81

Query: 1583 --LQHKVSEEEAISLTMPITNDEIILALSTIDSDKAPGPNGFSSHFFKCCWSVIGVDFIK 1410
              LQ + +  +   LT  ++++EI   L ++  DK+PGP+G++S F+K  W +IG +F  
Sbjct: 82   DLLQFRCTNSDNEMLTREVSSEEIKTVLFSMPKDKSPGPDGYTSEFYKATWDIIGQEFTL 141

Query: 1409 EVKSCFASAKLLGEVNATLVSLIPKIPNASTFNDYRPIACCNVIYKCISKILTIRLK 1239
             V+S F    L   +N+ +++LIPK   A    DYRPI+CCNV+YK ISKI+  RLK
Sbjct: 142  PVQSFFQKGFLPKGINSIILALIPKKLAAKEMRDYRPISCCNVLYKVISKIIANRLK 198



 Score = 61.2 bits (147), Expect(3) = e-102
 Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
 Frame = -2

Query: 227 KHIWDIVINKDTIWVQWVQQNLIKGKDFWLLKTLVD-ASRCWRRILDHREAASKFVLHLI 51
           K +W I+ N +++W +WV + LI+ K  W LK      S  WR+IL  R+ A  F    +
Sbjct: 536 KLVWRIISNSNSLWTKWVAEYLIRKKSIWSLKQSTSMGSWIWRKILKIRDVAKSFSRVEV 595

Query: 50  GNGRGTKLWKDRW 12
           GNG     W D W
Sbjct: 596 GNGESASFWYDHW 608


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score =  239 bits (610), Expect(4) = e-100
 Identities = 116/325 (35%), Positives = 190/325 (58%)
 Frame = -1

Query: 1209 QSAFISRRSIQDNIMLAHELLRNYHRNNGARRCALKIDLRKAYDCIRWDALLTTLDKFHI 1030
            QSAF+  R + +N++LA EL+++YH+++ + RCA+KID+ KA+D ++W  LL TL+    
Sbjct: 704  QSAFVRERLLMENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFLLNTLEALKF 763

Query: 1029 PQRFINWVSMCITAPKFSIMVNGSAYGYIEGKRGIRQGCPLSPYLFVLLMDVFNALMLKQ 850
            P++F +W+ +CI+   FS+ VN    G+   KRG+RQGC LSPYLFV+ M+V + ++   
Sbjct: 764  PEKFRHWIKLCISTATFSVQVNSEQAGFFGSKRGLRQGCALSPYLFVICMNVLSHMIDVA 823

Query: 849  VQLGFYSLHPRCKNPIVTHLCFADDLLVCMKGDVQSARSLSSTLTTFSNRTGLEVNNRKS 670
                    HP+CK   +THLCFADDL+V + G  +S   + +    F+ ++GL ++  KS
Sbjct: 824  AVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKDFAGKSGLHISLEKS 883

Query: 669  SIFISSVDATTSLSIQAMLRFEXXXXXXXXXXXXXLSSRLSHSDCVALIDHVIARIKSWK 490
            +++++ V      +I +   F              L+ +++ +D   L+D V ++I SW 
Sbjct: 884  TLYLAEVSELNRNNILSAFPFASGQLPVRYLGFPLLTKQMTTADYSPLLDKVRSKISSWT 943

Query: 489  ERSLSFAGRVLLNKVILSSMLIFWTSCFVLPKKTVNTLNAIFRNFLWSGIELTHKHPSVK 310
             RSLS+AGR+ L   ++ S+  FW S + LP   +  +  +   FLWSG EL  K   + 
Sbjct: 944  ARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPKKAKIT 1003

Query: 309  WSFVCLPYKEGGLGIRCIEATNTAS 235
            W+ +C   +EGGLGI+ +   N  S
Sbjct: 1004 WTSLCKLKQEGGLGIKSLLEANKVS 1028



 Score =  115 bits (288), Expect(4) = e-100
 Identities = 123/467 (26%), Positives = 192/467 (41%), Gaps = 9/467 (1%)
 Frame = -2

Query: 2555 FVRTFVYRYNSEELRDDLWYKISNFAGD---NNLPWCILGDFNAYL--FSHDKEGGAALT 2391
            F  +F+Y  N  E R  LW  I N        N PW + GDFN  L    H     +  T
Sbjct: 348  FFCSFIYASNFVEERKILWEDIRNHHDSPLFRNKPWMLCGDFNEILDGSEHSNYDTSPFT 407

Query: 2390 SANLYRFHACVQNSHLFVCPYVGCFYTWSNKQDVDARITCKLDRVLINMAWLDCFPDSVT 2211
               +  F   V+ S L    Y G  +TW NK++ +  I  KLD+VL+N +W   FP S +
Sbjct: 408  PLGMRDFQEVVRYSSLTDLGYHGPRFTWCNKRE-NGLICKKLDKVLVNDSWCITFPHSYS 466

Query: 2210 DFLTCGISDHSLMVTSVFSGRGTVTKAYRYYNTWEEESDFLGVVAAAWNIKVQGTPMFIF 2031
             F   G SDH+         RG +                  + AAA    + G   F F
Sbjct: 467  VFEAGGCSDHT---------RGRIM-----------------LEAAA----IGGRRPFKF 496

Query: 2030 VTKL*NV--KKALIAWRKKRFTNFSTQVGVAKAHLANVQKELQVSPFCVDTIDAEREEVR 1857
            V  L ++  K +L A              + K  L ++ K L+           +++   
Sbjct: 497  VNVLTSIPQKPSLRA--------------LGKEKLGDLPKHLEEGYM-------KQKSKL 535

Query: 1856 DYAKKARYEESMKKQQSRVRWMQLGDNNTPFFHNSIIERIARNRILVLYDVAGTKLTSDQ 1677
             + K      S   + ++VR MQ          NSI E    N ++         L + +
Sbjct: 536  HWMKVGDRNNSYFHKAAQVRRMQ----------NSIREIQGPNGVV---------LQTSE 576

Query: 1676 DIAAECIAYYTNLFGQHSATPFDAQAWDQIE--LQHKVSEEEAISLTMPITNDEIILALS 1503
            +I  E   ++   F  H  + F     ++++  +  + S  +   LT  +T++EI   L 
Sbjct: 577  EIKGEAERFFQE-FLNHQPSDFQGMTVEELQNLMSFRCSATDQDMLTREVTSEEIQKVLF 635

Query: 1502 TIDSDKAPGPNGFSSHFFKCCWSVIGVDFIKEVKSCFASAKLLGEVNATLVSLIPKIPNA 1323
             + S+K+PGP+G++                               +NAT+++LIPK   A
Sbjct: 636  AMPSNKSPGPDGYT------------------------------RLNATILALIPKKDEA 665

Query: 1322 STFNDYRPIACCNVIYKCISKILTIRLKHVVKSWLVLANPPSFREGL 1182
            +   DYRPI+CCNVIYK ISKI+  RLK ++ ++++       RE L
Sbjct: 666  TLMRDYRPISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERL 712



 Score = 48.5 bits (114), Expect(4) = e-100
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
 Frame = -2

Query: 227  KHIWDIVINKDTIWVQWVQQNLIKGKDFWLLKTLVD-ASRCWRRILDHREAASKFVLHLI 51
            K IW +V  + ++WV WV   +I+   FW         S  W+++L++R+ A       I
Sbjct: 1031 KLIWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWMWKKLLNYRDVAKSMCKVEI 1090

Query: 50   GNGRGTKLWKDRW 12
             +G  T  W D W
Sbjct: 1091 KSGSSTSFWYDNW 1103



 Score = 36.2 bits (82), Expect(4) = e-100
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = -1

Query: 2679 WMYSDNYSYHALGRIWLLWDPVSVKINFLFSSAQYI 2572
            W    NY  H LGRIW++W   +V+I  +F S+Q I
Sbjct: 301  WSILTNYESHRLGRIWVVWS-ANVRITPVFKSSQMI 335


>emb|CCA66180.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1383

 Score =  196 bits (497), Expect(4) = e-100
 Identities = 136/448 (30%), Positives = 209/448 (46%), Gaps = 4/448 (0%)
 Frame = -2

Query: 2555 FVRTFVYRYNSEEL--RDDLWYKISNFAGDNNLPWCILGDFNAYLFSHDKEGGAALTSAN 2382
            F  T +  YN  E+  R ++W +I  F   N LP  ++GDFN  L   ++ G  + +   
Sbjct: 103  FECTLITVYNPCEIAARSEVWKQIIEFQNSNPLPCLLVGDFNEVLRPSER-GSLSFSHNG 161

Query: 2381 LYRFHACVQNSHLFVCPYVGCFYTWSNKQDVDARITCKLDRVLINMAWLDCFPDSVTDFL 2202
            +  F + VQ   L   P     YTW       A     LDR+L++  W+   P+     L
Sbjct: 162  INDFKSFVQELKLLEIPSSSRAYTWYR-----ANSKSLLDRLLVSPEWVSHCPNIKVSIL 216

Query: 2201 TCGISDHS-LMVTSVFSGRGTVTKAYRYYNTWEEESDFLGVVAAAWNIKVQGTPMFIFVT 2025
              G+SDH  L+V S     G   K +R+ N W  +   + +V A+W+     +P    V 
Sbjct: 217  QRGLSDHCPLLVHSHIQEWGP--KPFRFNNCWLTDPKCMKIVEASWS----SSPKISVVE 270

Query: 2024 KL*NVKKALIAWRKKRFTNFSTQVGVAKAHLANVQKELQVSPFCVDTIDAEREEVRDYAK 1845
            KL   KK L  W    F +    +   +  +AN  KE        + ++  RE   D  K
Sbjct: 271  KLKETKKRLKEWNLNEFGSIDANIRKLEDCIANFDKEADERELDKEELEKRREAQADLWK 330

Query: 1844 KARYEESMKKQQSRVRWMQLGDNNTPFFHNSIIERIARNRILVLYDVAGTKLTSDQDIAA 1665
              + +E    Q+SR+ W++ GD NT FFH +I     R  ++   +  G        I  
Sbjct: 331  WMKRKEIYWAQRSRITWLKAGDKNTKFFH-AIASNKKRKNMMACIETDGQSTNDPSQIKK 389

Query: 1664 ECIAYYTNLFGQ-HSATPFDAQAWDQIELQHKVSEEEAISLTMPITNDEIILALSTIDSD 1488
            E  A++  +F + H   P      + + L+ ++S+ +A SL  P T +EI  A+S+  SD
Sbjct: 390  EARAFFKKIFKEDHVKRP----TLENLHLK-RLSQNQANSLITPFTTEEIDTAVSSCASD 444

Query: 1487 KAPGPNGFSSHFFKCCWSVIGVDFIKEVKSCFASAKLLGEVNATLVSLIPKIPNASTFND 1308
            KAPGP+GF+  F K  W +I  D    V   + +  L    N   ++LIPKI N S+  D
Sbjct: 445  KAPGPDGFNFKFVKSAWDIIKTDIYGIVNDFWETGCLPQGCNTAYIALIPKIDNPSSLKD 504

Query: 1307 YRPIACCNVIYKCISKILTIRLKHVVKS 1224
            YRPI+    IYK ++K+L  RL+ V+ S
Sbjct: 505  YRPISMVGFIYKIVAKLLAKRLQSVISS 532



 Score =  181 bits (460), Expect(4) = e-100
 Identities = 112/343 (32%), Positives = 178/343 (51%), Gaps = 5/343 (1%)
 Frame = -1

Query: 1242 QACCQELVSPCQSAFISRRSIQDNIMLAHELLRNYHRNNGARRCALKIDLRKAYDCIRWD 1063
            Q+    L+SP QS+++  R I D  ++A E++ +  + N      LK+D  KAYD + W+
Sbjct: 527  QSVISSLISPLQSSYVKGRQILDGALVASEIIESCKKRN-IEAILLKLDFHKAYDSVSWN 585

Query: 1062 ALLTTLDKFHIPQRFINWVSMCITAPKFSIMVNGSAYGYIEGKRGIRQGCPLSPYLFVLL 883
             L  TLD+ + P ++  W+  C+T+   SI+VNGS     +  RG+RQG PLSP+LFVL+
Sbjct: 586  FLQWTLDQMNFPVKWCEWIKTCVTSASASILVNGSPTPPFKLHRGLRQGDPLSPFLFVLV 645

Query: 882  MDVFNALMLKQVQLGFYSLHPRC-KNPIVTHLCFADDLLVCMKGDVQSARSLSSTLTTFS 706
             +V + ++ K   L  +   P C +   +THL +ADD L+  + +  S +++  TL  F 
Sbjct: 646  GEVLSQMISKATSLQLWRGIPACSRGSEITHLQYADDTLMFCEANTNSLKNIQKTLIIFQ 705

Query: 705  NRTGLEVNNRKSSIFISSVDATTSLSIQA----MLRFEXXXXXXXXXXXXXLSSRLSHSD 538
              +GL+VN  KSS+    ++ T+S   +A    M +                 +R+   D
Sbjct: 706  LVSGLQVNFHKSSLM--GLNVTSSWIQEAANSLMCKIGTIPFSYLGLPIGDNPARIRTWD 763

Query: 537  CVALIDHVIARIKSWKERSLSFAGRVLLNKVILSSMLIFWTSCFVLPKKTVNTLNAIFRN 358
               +ID +  ++ SWK + LS  GR+ L K  LS++ +++ S F +PK  +  +N + R 
Sbjct: 764  --PIIDKLEKKLASWKGKLLSLGGRLTLIKASLSNLPLYYMSLFPVPKGVIEKINKLMRA 821

Query: 357  FLWSGIELTHKHPSVKWSFVCLPYKEGGLGIRCIEATNTASKF 229
            FLW G         V WS V  P   GGLGI  I   N +  F
Sbjct: 822  FLWCGDFGKRPFSMVSWSIVQQPKTSGGLGIGNILHKNLSLLF 864



 Score = 36.2 bits (82), Expect(4) = e-100
 Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
 Frame = -1

Query: 2844 MNNIGCWNIRGLNDPLKQVEVSNLIRNNNIKICGLVETLVQESNKDIIR-----NNILPS 2680
            M  I  WNIRGLN  +K+  +  LI  NN     + ET ++  N  ++R     N I   
Sbjct: 1    MKPILSWNIRGLNARMKRASLRKLIAINNPGCVFVQETKMENINARLMRTCWKSNEI--E 58

Query: 2679 WMYSDNYSYHALGRIWLLWD 2620
            W++S   S  + G I  +WD
Sbjct: 59   WIFSP--SRGSSGGILAIWD 76



 Score = 23.9 bits (50), Expect(4) = e-100
 Identities = 23/83 (27%), Positives = 32/83 (38%), Gaps = 9/83 (10%)
 Frame = -2

Query: 230  FKHIWDIVINKDTIWVQWVQQ--NLIKGKDFWLLKTLVDASRCWRRI----LDHREA--- 78
            FK IW +  N  ++W   ++   N         LK  V     W+ I    L H  A   
Sbjct: 864  FKWIWRLFENPSSMWGSIIRSKYNYSSTCSISDLKKPVSGGP-WKSICAAVLGHEGARLI 922

Query: 77   ASKFVLHLIGNGRGTKLWKDRWL 9
            A   +   +GNG  +  W D WL
Sbjct: 923  AVNGMRKNVGNGISSLFWHDTWL 945


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