BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00027237
         (383 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635431.1| PREDICTED: splicing factor U2af large subuni...    85   9e-15
ref|XP_002267854.2| PREDICTED: splicing factor U2af large subuni...    85   9e-15
emb|CBI35711.3| unnamed protein product [Vitis vinifera]               85   9e-15
emb|CBI25913.3| unnamed protein product [Vitis vinifera]               85   9e-15
ref|XP_002888120.1| hypothetical protein ARALYDRAFT_475241 [Arab...    83   4e-14
ref|XP_004300618.1| PREDICTED: splicing factor U2af large subuni...    82   8e-14
gb|AAG51641.1|AC018908_7 putative U2 snRNP auxiliary factor; 190...    81   1e-13
ref|NP_176287.3| Splicing factor U2af large subunit B [Arabidops...    81   1e-13
ref|NP_564764.1| RNA recognition motif-containing protein [Arabi...    81   1e-13
gb|AAM98156.1| putative U2 snRNP auxiliary factor [Arabidopsis t...    81   1e-13
gb|EMT00217.1| Splicing factor U2af large subunit B [Aegilops ta...    80   3e-13
gb|EMS55481.1| Splicing factor U2af large subunit B [Triticum ur...    80   3e-13
sp|Q2QKB4.1|U2A2B_WHEAT RecName: Full=Splicing factor U2af large...    80   3e-13
ref|XP_004506427.1| PREDICTED: splicing factor U2af large subuni...    79   9e-13
gb|EMT26945.1| Splicing factor U2af large subunit A [Aegilops ta...    79   9e-13
gb|EMS52811.1| Splicing factor U2af large subunit A [Triticum ur...    79   9e-13
ref|NP_001190937.1| Splicing factor U2af large subunit A [Arabid...    79   9e-13
ref|XP_002866997.1| hypothetical protein ARALYDRAFT_490965 [Arab...    79   9e-13
ref|NP_195387.1| Splicing factor U2af large subunit A [Arabidops...    79   9e-13
ref|XP_006466768.1| PREDICTED: splicing factor U2af large subuni...    78   1e-12

>ref|XP_003635431.1| PREDICTED: splicing factor U2af large subunit B-like, partial
           [Vitis vinifera]
          Length = 238

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 40/55 (72%), Positives = 45/55 (81%)
 Frame = +3

Query: 6   NGDWSSGVGKVFLEYADISGSSKAKAALHGRKFGGNDVTAEYYPEDKYLNGDYGA 170
           NGD   GVGKVFLEY+D +GSS A+ AL GRKFGGN V+A YYPEDKY +GDYGA
Sbjct: 184 NGDLIPGVGKVFLEYSDTAGSSSARNALSGRKFGGNVVSAVYYPEDKYYDGDYGA 238


>ref|XP_002267854.2| PREDICTED: splicing factor U2af large subunit B-like, partial
           [Vitis vinifera]
          Length = 410

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 40/55 (72%), Positives = 45/55 (81%)
 Frame = +3

Query: 6   NGDWSSGVGKVFLEYADISGSSKAKAALHGRKFGGNDVTAEYYPEDKYLNGDYGA 170
           NGD   GVGKVFLEY+D +GSS A+ AL GRKFGGN V+A YYPEDKY +GDYGA
Sbjct: 356 NGDLIPGVGKVFLEYSDTAGSSSARNALSGRKFGGNVVSAVYYPEDKYYDGDYGA 410


>emb|CBI35711.3| unnamed protein product [Vitis vinifera]
          Length = 116

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 40/55 (72%), Positives = 45/55 (81%)
 Frame = +3

Query: 6   NGDWSSGVGKVFLEYADISGSSKAKAALHGRKFGGNDVTAEYYPEDKYLNGDYGA 170
           NGD   GVGKVFLEY+D +GSS A+ AL GRKFGGN V+A YYPEDKY +GDYGA
Sbjct: 62  NGDLIPGVGKVFLEYSDTAGSSSARNALSGRKFGGNVVSAVYYPEDKYYDGDYGA 116


>emb|CBI25913.3| unnamed protein product [Vitis vinifera]
          Length = 6467

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 40/55 (72%), Positives = 45/55 (81%)
 Frame = +3

Query: 6    NGDWSSGVGKVFLEYADISGSSKAKAALHGRKFGGNDVTAEYYPEDKYLNGDYGA 170
            NGD   GVGKVFLEY+D +GSS A+ AL GRKFGGN V+A YYPEDKY +GDYGA
Sbjct: 6413 NGDLIPGVGKVFLEYSDTAGSSSARNALSGRKFGGNVVSAVYYPEDKYYDGDYGA 6467


>ref|XP_002888120.1| hypothetical protein ARALYDRAFT_475241 [Arabidopsis lyrata subsp.
           lyrata] gi|297333961|gb|EFH64379.1| hypothetical protein
           ARALYDRAFT_475241 [Arabidopsis lyrata subsp. lyrata]
          Length = 589

 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 37/51 (72%), Positives = 43/51 (84%)
 Frame = +3

Query: 12  DWSSGVGKVFLEYADISGSSKAKAALHGRKFGGNDVTAEYYPEDKYLNGDY 164
           D + GVGKVFLEYAD+ GSSKA++ ++GRKFGGN V A YYPEDKYL GDY
Sbjct: 537 DPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYLQGDY 587


>ref|XP_004300618.1| PREDICTED: splicing factor U2af large subunit B-like [Fragaria
           vesca subsp. vesca]
          Length = 590

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 36/55 (65%), Positives = 43/55 (78%)
 Frame = +3

Query: 6   NGDWSSGVGKVFLEYADISGSSKAKAALHGRKFGGNDVTAEYYPEDKYLNGDYGA 170
           +G  S GVGKVFLEYAD+ GS+KA+  +HGRKFGGN V A +YPEDK+  GDY A
Sbjct: 534 DGQPSPGVGKVFLEYADVDGSTKARTGMHGRKFGGNSVVAVFYPEDKFAQGDYDA 588


>gb|AAG51641.1|AC018908_7 putative U2 snRNP auxiliary factor; 19096-22891 [Arabidopsis
           thaliana]
          Length = 568

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 36/51 (70%), Positives = 42/51 (82%)
 Frame = +3

Query: 12  DWSSGVGKVFLEYADISGSSKAKAALHGRKFGGNDVTAEYYPEDKYLNGDY 164
           D + GVGKVFLEYAD+ GSSKA++ ++GRKFGGN V A YYPEDKY  GDY
Sbjct: 516 DPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYAQGDY 566


>ref|NP_176287.3| Splicing factor U2af large subunit B [Arabidopsis thaliana]
           gi|209572798|sp|Q8L716.2|U2A2B_ARATH RecName:
           Full=Splicing factor U2af large subunit B; AltName:
           Full=U2 auxiliary factor 65 kDa subunit B; AltName:
           Full=U2 small nuclear ribonucleoprotein auxiliary factor
           large subunit B; Short=U2 snRNP auxiliary factor large
           subunit B gi|332195625|gb|AEE33746.1| Splicing factor
           U2af large subunit B [Arabidopsis thaliana]
          Length = 589

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 36/51 (70%), Positives = 42/51 (82%)
 Frame = +3

Query: 12  DWSSGVGKVFLEYADISGSSKAKAALHGRKFGGNDVTAEYYPEDKYLNGDY 164
           D + GVGKVFLEYAD+ GSSKA++ ++GRKFGGN V A YYPEDKY  GDY
Sbjct: 537 DPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYAQGDY 587


>ref|NP_564764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|12323801|gb|AAG51869.1|AC079675_4 U2 snRNP auxiliary
           factor, large subunit, putative; 15147-15692
           [Arabidopsis thaliana] gi|332195616|gb|AEE33737.1| RNA
           recognition motif-containing protein [Arabidopsis
           thaliana]
          Length = 111

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 36/51 (70%), Positives = 42/51 (82%)
 Frame = +3

Query: 12  DWSSGVGKVFLEYADISGSSKAKAALHGRKFGGNDVTAEYYPEDKYLNGDY 164
           D + GVGKVFLEYAD+ GSSKA++ ++GRKFGGN V A YYPEDKY  GDY
Sbjct: 59  DPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYAQGDY 109


>gb|AAM98156.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
          Length = 589

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 36/51 (70%), Positives = 42/51 (82%)
 Frame = +3

Query: 12  DWSSGVGKVFLEYADISGSSKAKAALHGRKFGGNDVTAEYYPEDKYLNGDY 164
           D + GVGKVFLEYAD+ GSSKA++ ++GRKFGGN V A YYPEDKY  GDY
Sbjct: 537 DPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYAQGDY 587


>gb|EMT00217.1| Splicing factor U2af large subunit B [Aegilops tauschii]
          Length = 543

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 36/55 (65%), Positives = 45/55 (81%)
 Frame = +3

Query: 6   NGDWSSGVGKVFLEYADISGSSKAKAALHGRKFGGNDVTAEYYPEDKYLNGDYGA 170
           +G+  SGVGKVFLEYAD+ GS+KAK A+HGRKFGGN V A +YPE+K+ + DY A
Sbjct: 487 SGEPVSGVGKVFLEYADVDGSTKAKTAMHGRKFGGNPVVAVFYPENKFADEDYDA 541


>gb|EMS55481.1| Splicing factor U2af large subunit B [Triticum urartu]
          Length = 598

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 36/55 (65%), Positives = 45/55 (81%)
 Frame = +3

Query: 6   NGDWSSGVGKVFLEYADISGSSKAKAALHGRKFGGNDVTAEYYPEDKYLNGDYGA 170
           +G+  SGVGKVFLEYAD+ GS+KAK A+HGRKFGGN V A +YPE+K+ + DY A
Sbjct: 542 SGEPVSGVGKVFLEYADVDGSTKAKTAMHGRKFGGNPVVAVFYPENKFADEDYDA 596


>sp|Q2QKB4.1|U2A2B_WHEAT RecName: Full=Splicing factor U2af large subunit B; AltName:
           Full=U2 auxiliary factor 65 kDa subunit B; AltName:
           Full=U2 small nuclear ribonucleoprotein auxiliary factor
           large subunit B; Short=U2 snRNP auxiliary factor large
           subunit B gi|68036764|gb|AAY84880.1| U2AF large subunit
           [Triticum aestivum]
          Length = 543

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 36/55 (65%), Positives = 45/55 (81%)
 Frame = +3

Query: 6   NGDWSSGVGKVFLEYADISGSSKAKAALHGRKFGGNDVTAEYYPEDKYLNGDYGA 170
           +G+  SGVGKVFLEYAD+ GS+KAK A+HGRKFGGN V A +YPE+K+ + DY A
Sbjct: 487 SGEPVSGVGKVFLEYADVDGSTKAKTAMHGRKFGGNPVVAVFYPENKFADEDYDA 541


>ref|XP_004506427.1| PREDICTED: splicing factor U2af large subunit B-like [Cicer
           arietinum]
          Length = 576

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 34/53 (64%), Positives = 43/53 (81%)
 Frame = +3

Query: 6   NGDWSSGVGKVFLEYADISGSSKAKAALHGRKFGGNDVTAEYYPEDKYLNGDY 164
           +GD S GVGKVFLEY DI G++KA+  L+GRKFGGN+V A +YPE+K+  GDY
Sbjct: 522 DGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEVIAVFYPENKFAQGDY 574


>gb|EMT26945.1| Splicing factor U2af large subunit A [Aegilops tauschii]
          Length = 663

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 34/47 (72%), Positives = 40/47 (85%)
 Frame = +3

Query: 24  GVGKVFLEYADISGSSKAKAALHGRKFGGNDVTAEYYPEDKYLNGDY 164
           GVGKVFLEYADI GS+KAK  +HGRKFGGN V A +YPE+K+ +GDY
Sbjct: 615 GVGKVFLEYADIDGSTKAKVGMHGRKFGGNQVVAVFYPENKFADGDY 661


>gb|EMS52811.1| Splicing factor U2af large subunit A [Triticum urartu]
          Length = 588

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 34/47 (72%), Positives = 40/47 (85%)
 Frame = +3

Query: 24  GVGKVFLEYADISGSSKAKAALHGRKFGGNDVTAEYYPEDKYLNGDY 164
           GVGKVFLEYADI GS+KAK  +HGRKFGGN V A +YPE+K+ +GDY
Sbjct: 540 GVGKVFLEYADIDGSTKAKVGMHGRKFGGNQVVAVFYPENKFADGDY 586


>ref|NP_001190937.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
           gi|332661290|gb|AEE86690.1| Splicing factor U2af large
           subunit A [Arabidopsis thaliana]
          Length = 551

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 34/55 (61%), Positives = 45/55 (81%)
 Frame = +3

Query: 6   NGDWSSGVGKVFLEYADISGSSKAKAALHGRKFGGNDVTAEYYPEDKYLNGDYGA 170
           NG+  +G+GKVFL+YAD  GS++A+  ++GRKFGGN+V A YYPEDK+  GDYGA
Sbjct: 497 NGEPVAGLGKVFLKYADTDGSTRARFGMNGRKFGGNEVVAVYYPEDKFEQGDYGA 551


>ref|XP_002866997.1| hypothetical protein ARALYDRAFT_490965 [Arabidopsis lyrata subsp.
           lyrata] gi|297312833|gb|EFH43256.1| hypothetical protein
           ARALYDRAFT_490965 [Arabidopsis lyrata subsp. lyrata]
          Length = 567

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 34/55 (61%), Positives = 44/55 (80%)
 Frame = +3

Query: 6   NGDWSSGVGKVFLEYADISGSSKAKAALHGRKFGGNDVTAEYYPEDKYLNGDYGA 170
           NG+   G+GKVFL+YAD  GS++A+  ++GRKFGGN+V A YYPEDK+  GDYGA
Sbjct: 513 NGEPVPGLGKVFLKYADTDGSTRARTGMNGRKFGGNEVVAVYYPEDKFEQGDYGA 567


>ref|NP_195387.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
           gi|75318082|sp|O23212.2|U2A2A_ARATH RecName:
           Full=Splicing factor U2af large subunit A; AltName:
           Full=U2 auxiliary factor 65 kDa subunit A; AltName:
           Full=U2 small nuclear ribonucleoprotein auxiliary factor
           large subunit A; Short=U2 snRNP auxiliary factor large
           subunit A gi|18087531|gb|AAL58899.1|AF462805_1
           At4g35590/C7A10_670 [Arabidopsis thaliana]
           gi|4006898|emb|CAB16828.1| splicing factor-like protein
           [Arabidopsis thaliana] gi|7270617|emb|CAB80335.1|
           splicing factor-like protein [Arabidopsis thaliana]
           gi|23506119|gb|AAN28919.1| At4g35590/C7A10_670
           [Arabidopsis thaliana] gi|24030414|gb|AAN41365.1|
           putative splicing factor [Arabidopsis thaliana]
           gi|332661287|gb|AEE86687.1| Splicing factor U2af large
           subunit A [Arabidopsis thaliana]
          Length = 573

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 34/55 (61%), Positives = 45/55 (81%)
 Frame = +3

Query: 6   NGDWSSGVGKVFLEYADISGSSKAKAALHGRKFGGNDVTAEYYPEDKYLNGDYGA 170
           NG+  +G+GKVFL+YAD  GS++A+  ++GRKFGGN+V A YYPEDK+  GDYGA
Sbjct: 519 NGEPVAGLGKVFLKYADTDGSTRARFGMNGRKFGGNEVVAVYYPEDKFEQGDYGA 573


>ref|XP_006466768.1| PREDICTED: splicing factor U2af large subunit B-like isoform X6
           [Citrus sinensis]
          Length = 368

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 34/53 (64%), Positives = 43/53 (81%)
 Frame = +3

Query: 6   NGDWSSGVGKVFLEYADISGSSKAKAALHGRKFGGNDVTAEYYPEDKYLNGDY 164
           NG+ S GVGKVFLEYADI G++KA+  ++GRKFGGN V A +YPE+K+  GDY
Sbjct: 314 NGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENKFAQGDY 366