BLASTX nr result
ID: Papaver27_contig00026020
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00026020
(4685 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e... 397 0.0
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera] 402 0.0
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] 380 0.0
gb|AAP53789.1| retrotransposon protein, putative, unclassified [... 370 0.0
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 374 0.0
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group] 376 0.0
gb|ABA97970.1| retrotransposon protein, putative, unclassified, ... 390 0.0
gb|AAX95226.1| retrotransposon protein, putative, unclassified [... 376 0.0
gb|ABA91843.2| retrotransposon protein, putative, unclassified [... 376 0.0
emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera] 413 0.0
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g... 338 0.0
emb|CAJ00278.1| hypothetical protein [Lotus japonicus] 400 0.0
emb|CAJ00274.1| hypothetical protein [Lotus japonicus] 400 0.0
ref|XP_007216306.1| hypothetical protein PRUPE_ppa019597mg, part... 411 0.0
gb|ABF94845.1| retrotransposon protein, putative, unclassified [... 359 0.0
emb|CAJ00277.1| hypothetical protein [Lotus japonicus] 398 0.0
gb|ACY01928.1| hypothetical protein [Beta vulgaris] 396 0.0
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays] 334 0.0
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ... 395 0.0
gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sa... 354 0.0
>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1348
Score = 397 bits (1020), Expect(4) = 0.0
Identities = 197/355 (55%), Positives = 258/355 (72%)
Frame = +1
Query: 1876 VLDSFADVFEEPTALPPSRSLDHRIPLKPDVVPTSQKPYRCPYIQKSIVEELVK*ILTAG 2055
++ ++ D+F+EPT LPP R DH IP+K + VP + +PYR P+ QK+ +E+ ++ +L +
Sbjct: 407 LIQTYMDIFKEPTDLPPERGCDHSIPIKDNSVPPNIRPYRVPHRQKNEMEQQIQNLLESS 466
Query: 2056 FIQNSHSLFASPILLVKKKDGTLRFCVDYRKLNDQTIKDKYPILLIEELLDEFYGATIFS 2235
I+ S S +ASP +LVKKKDG+ R C+DYR+LN QTIK+KYPI +IE+LLDE +GA +FS
Sbjct: 467 IIRPSTSPYASPAILVKKKDGSWRLCIDYRELNAQTIKNKYPIPVIEDLLDELFGAKVFS 526
Query: 2236 KIDLRSGYH*ILVHAPDIPKTAFHTHHGHFEFLFMPFGLTNAPATFQALMNEIFQPFLHK 2415
K+DLRSGYH I ++ DI KTAF+T+ GH+E+L MPFGLTNAPATFQ LMN IF +L +
Sbjct: 527 KLDLRSGYHQIRMNREDICKTAFNTYLGHYEYLVMPFGLTNAPATFQCLMNSIFAQYLRR 586
Query: 2416 FALVFFDDILVYSSSLADHIIHL*QVFALLRQQSLFSK*SKCSFAHTTLEYLGHLINADG 2595
F LVFFDDIL+YS + +H HL V LLRQ LF+K +KC FA + + YLGH+I+ DG
Sbjct: 587 FILVFFDDILIYSKNDEEHQEHLTIVLGLLRQHQLFAKLNKCVFAVSQVTYLGHVISGDG 646
Query: 2596 VAADPDKISAMEC*PQPQTLKQLRGFLGLTGYYRRFIQGYGNICKTLKYMLKKDDFSWSL 2775
VA DPDKIS + P+PQ L QLR FLG+TGYYRRFI+ YG IC+ L ML+K F W
Sbjct: 647 VATDPDKISTIVEWPKPQDLTQLRSFLGMTGYYRRFIRHYGVICRPLYDMLRKGGFDWKD 706
Query: 2776 DAHVAFSSLKTAMTSTPVFALQDFTKIFVLETDACSRGVGALLMPDDRPIAFFRK 2940
AF LK AMT+ PV AL DF++ F LETDA G+G +LM RP+A+F +
Sbjct: 707 PQDEAFVKLKLAMTTAPVLALPDFSENFTLETDASGTGIGGVLMQRGRPLAYFSR 761
Score = 301 bits (771), Expect(4) = 0.0
Identities = 151/347 (43%), Positives = 216/347 (62%), Gaps = 1/347 (0%)
Frame = +3
Query: 2925 SFFQKALGPKALALSTDEKEFLAIVIVVQKWKHYLSSSQFTINTDHQSLKYLIEKRFSTT 3104
++F + LG +A A+ST ++E LAI+ +++W+HY +Q I TD QSLK++ +++ +
Sbjct: 757 AYFSRTLGVRAAAMSTYDREALAIIESLKRWRHYFLGTQLIIRTDQQSLKFMTDQKVAEG 816
Query: 3105 LQQRWLLKLMGFDYVIRYKKGSDNIVADVLSRLPASDSSCHALTLTHPQWTEDLISSYES 3284
+Q + +L+L+ FDY I YKKG +N VAD LSR +S A+++ P W E + +SY++
Sbjct: 817 IQHKLMLRLLEFDYTIEYKKGKENKVADALSR---RGNSVMAISIAVPSWIEAVTNSYQN 873
Query: 3285 DDLAQQYIAQLLINP-IHQYYSYQHNILRYKGRLYVGSDNEIKXXXXXXXXXXXXXXXXX 3461
D ++ + QL + P Y+ +LRYKGR+YVG D E++
Sbjct: 874 DANCKELMEQLTLAPNADSGYTLNAGVLRYKGRIYVGKDPELRLNIIHSLHMSAVGGHSG 933
Query: 3462 IRGTYSRAKSHFFLPRMKHDIIEFVSACDTCQFNKGDHSFPSGLLQPLPIPEFAWQHISL 3641
TY R K F+ P MK +I V C CQ +K +H GLL+PLPIP+ AW HIS+
Sbjct: 934 RVATYQRVKHLFYWPGMKKEIHTMVRECAVCQRSKAEHCHYPGLLEPLPIPDMAWTHISM 993
Query: 3642 DFIEGLPLSNIKNVILVVVDRLTKYSHFYYLCHPFTAMKIAKEFLAHVFKLHGLPSSIVS 3821
DFIEGLP S K VI VVVDR TKY+H L HP++ +A+ F+ ++FKLHG P +IVS
Sbjct: 994 DFIEGLPSSKGKEVIFVVVDRFTKYAHSVPLSHPYSVQLVAQAFIDNIFKLHGFPIAIVS 1053
Query: 3822 DRDKICVIQFWQALFKTLGTTVKLSTSYHPQTYGQTE*TNACVEQYL 3962
DRD+I + WQ LFK++ ++ ST+YHPQT GQTE N CVE YL
Sbjct: 1054 DRDRIFTSKLWQELFKSMKVQLRFSTAYHPQTDGQTERVNQCVESYL 1100
Score = 138 bits (347), Expect(4) = 0.0
Identities = 69/156 (44%), Positives = 98/156 (62%)
Frame = +1
Query: 3967 CMTSSYPKKWANWFPLAEWWFNTNFHSSLKMSPF*SLDGYQPRHLVFLHYLIFYFNSNS* 4146
CM PKKW +W PLAEWW+NT FH++LK+SPF +L G+ P L+ + ++ +
Sbjct: 1102 CMAMQEPKKWVSWLPLAEWWYNTTFHTALKLSPFQALYGFPPP-LINEVAIPGPEDNEAR 1160
Query: 4147 DLFARQRHYASTAPR*TVQSSDRMKMFADRKRSDRVFAVGYMVFLKLQPYRKSYVDIRRN 4326
D ++ Q+ RMK +AD RS+R VG MV+LK+QPYR + +++
Sbjct: 1161 DFLEEKQVMLRRLKENLAQAQTRMKKYADLNRSERQLTVGDMVYLKMQPYRTTAFGLKQA 1220
Query: 4327 FKLSSKYFGPFEVLQRIGVVAYRLKLPIGSCIHPVF 4434
KL+S ++GPF V+QR+G VAYRL+LP G IHPVF
Sbjct: 1221 LKLTSIFYGPFRVMQRVGKVAYRLQLPEGVGIHPVF 1256
Score = 67.0 bits (162), Expect(4) = 0.0
Identities = 30/78 (38%), Positives = 48/78 (61%)
Frame = +3
Query: 4431 FYVSQLKMKIGSTAATLPQLPLVDHNSQFVLEPVSMLQTRFTIMAGLPIQQLLIQWSNSP 4610
F++SQLK G+ + P+LP+V + + EP + +TR + Q L+QW+N P
Sbjct: 1256 FHISQLKQHCGANSIPSPELPMVGKDGKIKTEPSLVKETRAMPRNHTLVTQWLVQWANLP 1315
Query: 4611 PEDATWEDMAHIQAKFPD 4664
PEDA+WED + I++ FP+
Sbjct: 1316 PEDASWEDASFIKSTFPE 1333
>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
Length = 1469
Score = 402 bits (1033), Expect(4) = 0.0
Identities = 202/352 (57%), Positives = 252/352 (71%)
Frame = +1
Query: 1876 VLDSFADVFEEPTALPPSRSLDHRIPLKPDVVPTSQKPYRCPYIQKSIVEELVK*ILTAG 2055
+L+ + +VF EP LPP+R+ DH I L P PYR PY QKS +E +V +L +G
Sbjct: 532 LLNLYPEVFSEPKGLPPTRNHDHHIVLHSGAKPVCVGPYRYPYFQKSEIENIVHEMLQSG 591
Query: 2056 FIQNSHSLFASPILLVKKKDGTLRFCVDYRKLNDQTIKDKYPILLIEELLDEFYGATIFS 2235
++ S F+SP+LLV+K DG+ R CVDYR LN +TIK K+PI +++ELLDE +G+TIFS
Sbjct: 592 IVRPGQSPFSSPVLLVRKHDGSWRLCVDYRALNKETIKVKFPIPIVDELLDELHGSTIFS 651
Query: 2236 KIDLRSGYH*ILVHAPDIPKTAFHTHHGHFEFLFMPFGLTNAPATFQALMNEIFQPFLHK 2415
K+DLRSGYH I VH DIPKTAF TH GH+EFL +PFGLTNAP TFQ+LMN+IF+P+L K
Sbjct: 652 KLDLRSGYHQIRVHPEDIPKTAFRTHEGHYEFLVIPFGLTNAPTTFQSLMNDIFKPYLRK 711
Query: 2416 FALVFFDDILVYSSSLADHIIHL*QVFALLRQQSLFSK*SKCSFAHTTLEYLGHLINADG 2595
F LVFF DILVYS SLADH+ HL V +L+Q LF+K SKC F + +EYLGHLI+ DG
Sbjct: 712 FILVFFYDILVYSKSLADHVHHLQTVLDILKQHQLFAKKSKCCFGCSEIEYLGHLISKDG 771
Query: 2596 VAADPDKISAMEC*PQPQTLKQLRGFLGLTGYYRRFIQGYGNICKTLKYMLKKDDFSWSL 2775
V ADP KI AM P P +LK LRGFLGLTGYYR+FI+GYG I L +LKK+ F W+
Sbjct: 772 VQADPTKIEAMLNWPFPTSLKSLRGFLGLTGYYRKFIKGYGLIAAPLTALLKKNSFKWTE 831
Query: 2776 DAHVAFSSLKTAMTSTPVFALQDFTKIFVLETDACSRGVGALLMPDDRPIAF 2931
A AF LK +TS PV AL DF+ F ++ DA GVGA+LM RP+A+
Sbjct: 832 SAKRAFQDLKHDVTSPPVLALPDFSIPFTIQCDASGIGVGAVLMQQGRPLAY 883
Score = 314 bits (804), Expect(4) = 0.0
Identities = 163/349 (46%), Positives = 218/349 (62%), Gaps = 3/349 (0%)
Frame = +3
Query: 2925 SFFQKALGPKALALSTDEKEFLAIVIVVQKWKHYLSSSQFTINTDHQSLKYLIEKRFSTT 3104
++ +A+ KAL LST EKE +A+V+ V+KW+ YL F I TD SLKYL+E++ T
Sbjct: 882 AYMSQAIHGKALQLSTYEKELMALVLAVKKWRSYLLGHNFKIQTDQXSLKYLLEQKMGTP 941
Query: 3105 LQQRWLLKLMGFDYVIRYKKGSDNIVADVLSRL--PASDSSCHALTLTHPQWTEDLISSY 3278
LQQ+W+ KL+G+++V+ YK+G +N VAD LSR + +A+T W E L + Y
Sbjct: 942 LQQKWITKLLGYEFVVEYKQGKENKVADALSRKMEDQKEGKLYAITAPANTWLEQLRTXY 1001
Query: 3279 ESDDLAQQYIAQLLINPI-HQYYSYQHNILRYKGRLYVGSDNEIKXXXXXXXXXXXXXXX 3455
D QQ I L + Q Y + +L YKGRLY+ + E++
Sbjct: 1002 AIDPKLQQIIKNLEQGSLASQNYKQRDGLLFYKGRLYIPASKELREQILYLLHSSPQGGH 1061
Query: 3456 XXIRGTYSRAKSHFFLPRMKHDIIEFVSACDTCQFNKGDHSFPSGLLQPLPIPEFAWQHI 3635
T RAKS F+ M+ ++ F+ CD CQ NK ++ P+GLLQPLPIP W I
Sbjct: 1062 SGFHKTLHRAKSEFYWEGMRKEVRRFIKECDICQQNKSENIHPAGLLQPLPIPTKVWTDI 1121
Query: 3636 SLDFIEGLPLSNIKNVILVVVDRLTKYSHFYYLCHPFTAMKIAKEFLAHVFKLHGLPSSI 3815
SLDFIEGLP S +VI+VVVDRL+KY+HF + HP+TA KIA+ FLA++FKLHGLP+SI
Sbjct: 1122 SLDFIEGLPNSESYSVIMVVVDRLSKYAHFIPISHPYTASKIAQVFLANIFKLHGLPNSI 1181
Query: 3816 VSDRDKICVIQFWQALFKTLGTTVKLSTSYHPQTYGQTE*TNACVEQYL 3962
V+DRD FW+ LFK GTT+K S++YHPQT GQTE N VEQYL
Sbjct: 1182 VTDRDPTFTSTFWKELFKLQGTTLKFSSAYHPQTDGQTEIVNKMVEQYL 1230
Score = 135 bits (339), Expect(4) = 0.0
Identities = 71/157 (45%), Positives = 96/157 (61%), Gaps = 1/157 (0%)
Frame = +1
Query: 3967 CMTSSYPKKWANWFPLAEWWFNTNFHSSLKMSPF*SLDGYQPRHLVFLHYLIFYFNSNS* 4146
C + PK W W PLAEWW+NTN H+S K+SPF S+ GY P L+ Y
Sbjct: 1232 CFSGDKPKGWVKWLPLAEWWYNTNIHASTKLSPFESVYGYPPPKLI--PYTPGTTQLQEV 1289
Query: 4147 DLFARQRHYASTAPR*TVQ-SSDRMKMFADRKRSDRVFAVGYMVFLKLQPYRKSYVDIRR 4323
+ + R R +Q + DRMK FAD K + R F +G +V+L+LQPY++ V RR
Sbjct: 1290 ENTLKTRDEIIRILRTNLQLAQDRMKKFADIKXTARSFNIGDLVYLRLQPYKQQSVVQRR 1349
Query: 4324 NFKLSSKYFGPFEVLQRIGVVAYRLKLPIGSCIHPVF 4434
N KLS +++GP+ VL++IG VAYRL+LP + IHPVF
Sbjct: 1350 NLKLSPRFYGPYRVLEKIGTVAYRLELPPEAKIHPVF 1386
Score = 44.7 bits (104), Expect(4) = 0.0
Identities = 22/80 (27%), Positives = 40/80 (50%)
Frame = +3
Query: 4431 FYVSQLKMKIGSTAATLPQLPLVDHNSQFVLEPVSMLQTRFTIMAGLPIQQLLIQWSNSP 4610
F+VS LK K+G + LP D + EP +L R + ++L++W
Sbjct: 1386 FHVSCLKEKLGERHQLVVTLPPXDKDGVIRXEPEEILHRRLKKKKNHAVTEVLVKWKGLG 1445
Query: 4611 PEDATWEDMAHIQAKFPDLI 4670
++A+W + + + +FPDL+
Sbjct: 1446 EDEASWVEYSTLVNEFPDLV 1465
Score = 205 bits (522), Expect = 1e-49
Identities = 133/423 (31%), Positives = 222/423 (52%), Gaps = 8/423 (1%)
Frame = +3
Query: 450 SRHPKVDFPHFDGTNPRGWVLKCERYFYLHQLPESERVDMATIHFTSKVDP*FLAYQQGK 629
+R ++DFP F+G +P GWV + +++F HQ RV +A+ H K F +
Sbjct: 86 TRAVRLDFPKFNGEDPNGWVYRADQFFNYHQTNPHHRVLLASFHMEGKALVWFQDIEAAG 145
Query: 630 KCIPWDIFVQDLYARFEDVAHDNYVGSFNKLSQTTSVEEYYDQFEHFKSFMVANNPHLPE 809
W+ FV+ L RF +++ + + +L QT++VE+Y QFE + + L E
Sbjct: 146 GISSWEGFVRALQTRFGSSPYEDPMEALIRLKQTSTVEDYKSQFEALSNQLRG----LAE 201
Query: 810 SFYTLSFISGLKEEIRPIVQMFNPETTSRSFYLARIQQADVQHNPKPLKPHTKPFYPTPL 989
S+ F+SGL+E IR +V+M NP +F LA++Q+ +V + K + PT L
Sbjct: 202 SYKLSCFLSGLRENIRFMVRMLNPSNLHIAFGLAKMQEENVAALRRTAKLGS---VPTRL 258
Query: 990 SVSHPPSTVKPIFSNSSTYHKQPSXXXXXXXXXXXXXXKSDPPIKRLTPIQMKARRDQGL 1169
++ P K ++ P++RL+P QMK RRD+GL
Sbjct: 259 AIGPPSPPEK----------------------------RAIVPVQRLSPSQMKERRDKGL 290
Query: 1170 CYNCEEFYRPGHMCRTQQLFMLVAEGENSDNGKVLSDEVQ--RDSPSGSDSPV-----DI 1328
CYNC++ + PGH C++ +LF++ E + S + +V EV R S S ++P+ I
Sbjct: 291 CYNCDDKWAPGHKCKSARLFIM--ECDESSDDEVPKSEVAEGRASKSKEETPIVEIEPGI 348
Query: 1329 SLHALTGNLSHETIRISGHIHKHPILVLIDTGSTHSFIDSQLSDKLNLHVSP-RGRCLL* 1505
S+HAL G+ + +T+R GHI +++L+DTGSTH+F+D + + +L +P G +
Sbjct: 349 SIHALVGSPNPKTMRFLGHICGRAVVILVDTGSTHNFMDPSVIQRAHLPSNPTEGLSVKV 408
Query: 1506 WPMEIPPSIKAFVSTSLGRCRGYHFAHDLRALPLGGCDMVLGADWLRQLGDVQFNFAKLR 1685
+ S + + L +G + D L LGGCD+VLG WL+ LG + ++F++L+
Sbjct: 409 ANGQAVRSEGSCAAVPL-HMQGNLYTIDFYILTLGGCDIVLGVQWLQTLGPILWDFSRLQ 467
Query: 1686 ISF 1694
+ F
Sbjct: 468 MEF 470
>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 380 bits (976), Expect(4) = 0.0
Identities = 181/355 (50%), Positives = 247/355 (69%)
Frame = +1
Query: 1876 VLDSFADVFEEPTALPPSRSLDHRIPLKPDVVPTSQKPYRCPYIQKSIVEELVK*ILTAG 2055
+L F V ++P LPP R+ DH I LK P + +PYR P+ QK +E+++ ++ +
Sbjct: 655 ILQEFPAVLKDPKGLPPRRNCDHVITLKSGAEPPNLRPYRVPHYQKEAMEKIIAELIESK 714
Query: 2056 FIQNSHSLFASPILLVKKKDGTLRFCVDYRKLNDQTIKDKYPILLIEELLDEFYGATIFS 2235
IQ S ++SP ++V+KKDG+ R CVDYR+LN QT+K+K+P+ +IE+LLDE GA +FS
Sbjct: 715 EIQVSDIPYSSPAVMVRKKDGSWRLCVDYRQLNAQTVKNKFPMPIIEDLLDELNGAKVFS 774
Query: 2236 KIDLRSGYH*ILVHAPDIPKTAFHTHHGHFEFLFMPFGLTNAPATFQALMNEIFQPFLHK 2415
K+DLRSGYH I + DIPKTAF TH GH+E+ MPFGLTNAP TFQ+LMN++ PFL K
Sbjct: 775 KLDLRSGYHQIRMATQDIPKTAFRTHLGHYEYQVMPFGLTNAPTTFQSLMNQVLAPFLRK 834
Query: 2416 FALVFFDDILVYSSSLADHIIHL*QVFALLRQQSLFSK*SKCSFAHTTLEYLGHLINADG 2595
+ LVFFDDIL+YS A+H H+ QV +L + L K KC+F ++ YLGH+I+ DG
Sbjct: 835 YVLVFFDDILIYSKDWAEHKEHIRQVMKVLEENKLVVKLKKCAFGLPSVTYLGHIISQDG 894
Query: 2596 VAADPDKISAMEC*PQPQTLKQLRGFLGLTGYYRRFIQGYGNICKTLKYMLKKDDFSWSL 2775
VA DP K+ + P P+++ LR FLG+TGYYRRFI+ YG +C+ L MLKK+ F W
Sbjct: 895 VATDPKKVEKIATYPTPKSVTDLRKFLGMTGYYRRFIKNYGIVCRPLHDMLKKEGFQWER 954
Query: 2776 DAHVAFSSLKTAMTSTPVFALQDFTKIFVLETDACSRGVGALLMPDDRPIAFFRK 2940
+ AF +LKT M ++PV +L DFTK FV+E DAC G+GA+LM RP+A+F K
Sbjct: 955 EQTEAFETLKTHMCTSPVLSLPDFTKEFVIEADACGNGIGAVLMQSGRPLAYFSK 1009
Score = 313 bits (803), Expect(4) = 0.0
Identities = 154/347 (44%), Positives = 220/347 (63%), Gaps = 1/347 (0%)
Frame = +3
Query: 2925 SFFQKALGPKALALSTDEKEFLAIVIVVQKWKHYLSSSQFTINTDHQSLKYLIEKRFSTT 3104
++F K LGPKA A S EKE +AI+ ++KW+HY+ S+ I TD QSLK+++ +R
Sbjct: 1005 AYFSKTLGPKAAAQSIYEKEAMAILEALKKWRHYVLGSRLIIKTDQQSLKFMMNQRLVEG 1064
Query: 3105 LQQRWLLKLMGFDYVIRYKKGSDNIVADVLSRLPASDSSCHALTLTHPQWTEDLISSYES 3284
+Q + LLKLM +DY I YK G +N+VAD LSR+P ++ C A+T P+W D+ SYE
Sbjct: 1065 IQHKLLLKLMEYDYSIEYKAGKENLVADALSRIPPAEQ-CQAITTVIPEWVRDIQRSYEG 1123
Query: 3285 DDLAQQYIAQL-LINPIHQYYSYQHNILRYKGRLYVGSDNEIKXXXXXXXXXXXXXXXXX 3461
D A + ++ + YS + +LRYKGR+YVG + EI+
Sbjct: 1124 DVQAHKILSLIGTEGDTDGSYSQEAGLLRYKGRIYVGENTEIREELIRSYHSSAFGGHSG 1183
Query: 3462 IRGTYSRAKSHFFLPRMKHDIIEFVSACDTCQFNKGDHSFPSGLLQPLPIPEFAWQHISL 3641
+R TY R KS F+ P +K + F+ C CQ K +H GLL PL +P+ AW HI++
Sbjct: 1184 MRATYHRIKSLFYWPGLKKAVEGFIRECPICQVTKAEHIHIPGLLDPLEVPDMAWAHITM 1243
Query: 3642 DFIEGLPLSNIKNVILVVVDRLTKYSHFYYLCHPFTAMKIAKEFLAHVFKLHGLPSSIVS 3821
DF+EGLP SN K+VILVVVDRLTKY+HF + HP+T ++ + F+ ++ +LHG+P +I++
Sbjct: 1244 DFVEGLPKSNGKDVILVVVDRLTKYAHFIAMAHPYTVEQVVELFMNNIHRLHGMPMAIIT 1303
Query: 3822 DRDKICVIQFWQALFKTLGTTVKLSTSYHPQTYGQTE*TNACVEQYL 3962
DRD+I Q +Q +FK++ +K STSYHPQT GQTE N C+E YL
Sbjct: 1304 DRDRIFTSQLFQEIFKSMKVRLKFSTSYHPQTDGQTERVNQCLESYL 1350
Score = 132 bits (331), Expect(4) = 0.0
Identities = 67/160 (41%), Positives = 99/160 (61%), Gaps = 5/160 (3%)
Frame = +1
Query: 3970 MTSSYPKKWANWFPLAEWWFNTNFHSSLKMSPF*SLDGYQPRHLVFLHYLIFYFNS---- 4137
MT P +W +W LAEWW+NT +H+S++M+PF +L GY P +
Sbjct: 1353 MTFQEPTRWHSWLALAEWWYNTTYHTSIQMTPFQALYGYPPPQINEFSVPCNVSEEARVT 1412
Query: 4138 -NS*DLFARQRHYASTAPR*TVQSSDRMKMFADRKRSDRVFAVGYMVFLKLQPYRKSYVD 4314
D ++ Y+ T ++ R+K +ADR RS+R AVG MV+LKLQPYR++
Sbjct: 1413 IEQKDAIIQKLKYSLT------EAQRRIKHYADRNRSERTLAVGDMVYLKLQPYRQTAFG 1466
Query: 4315 IRRNFKLSSKYFGPFEVLQRIGVVAYRLKLPIGSCIHPVF 4434
IR + KL SK++GPF++++++G VAY+L+LP GS IHPVF
Sbjct: 1467 IRGSLKLRSKFYGPFKIMEKVGRVAYKLQLPEGSNIHPVF 1506
Score = 69.7 bits (169), Expect(4) = 0.0
Identities = 34/77 (44%), Positives = 46/77 (59%)
Frame = +3
Query: 4431 FYVSQLKMKIGSTAATLPQLPLVDHNSQFVLEPVSMLQTRFTIMAGLPIQQLLIQWSNSP 4610
F+VSQLK IGS A + LP V + Q EPV++L+ R G+ + Q L+ W N
Sbjct: 1506 FHVSQLKKHIGSRAVPMANLPSVGPDGQIKTEPVAVLKRRMIPRGGVAVTQWLVLWHNLS 1565
Query: 4611 PEDATWEDMAHIQAKFP 4661
P +ATWED + IQ+ FP
Sbjct: 1566 PSEATWEDASMIQSMFP 1582
Score = 94.0 bits (232), Expect = 6e-16
Identities = 90/447 (20%), Positives = 182/447 (40%), Gaps = 22/447 (4%)
Frame = +3
Query: 405 RDLIGGAVHREQGK-----FSRHPKVDFPHFDGTNPRGWVLKCERYFYLHQLPESERVDM 569
R+++GG H G + P+++ P F G +P W+ +CE+++ + P + V++
Sbjct: 185 RNILGG--HMGDGNHYAEAIIKGPRLEIPLFSGEDPIDWLKQCEKFYEISGTPAEQWVNL 242
Query: 570 ATIHFTSKVDP*FLAYQQGKKCIPWDIFVQDLYARFEDVAHDNYVGSFNKLSQ-TTSVEE 746
A H K + + I W + + RF V F + Q +VE+
Sbjct: 243 AIAHLQGKAMKWYRGIGIPWQLITWPQWCAMVSTRFSAADTHEAVELFQNVKQYNQTVEQ 302
Query: 747 YYDQFEHFKSFMVANNPHLPESFYTLSFISGLKEEIRPIVQMFNPETTSRSFYLARIQQA 926
Y D+FE + + +P+L E + FI GL+ +I+ V P+ S++ + +
Sbjct: 303 YIDKFEEYVDLVRREHPYLQEQYLNSCFIGGLRGDIKHDVCGHKPQGLLESYWYTKNYER 362
Query: 927 DVQHNPKPLKPHTKPFYPTPLSVSHPPSTVKPIFSNSSTYHKQPSXXXXXXXXXXXXXXK 1106
L + F + PI +
Sbjct: 363 AANARKNLLNFNRNRF----------QNQAGPIQGRN----------------------- 389
Query: 1107 SDPPIKRLTPIQMKARRDQGLCYNCEEFYRPGHMCRTQQ-LFMLVAEGE----------- 1250
+ R P + ++++ C+ C+E + P H C+ ++ L L+ EGE
Sbjct: 390 ---VVNRGQPREQVEKKEERKCWFCKEPWFPKHQCKVKKALNALLMEGEEGKDEGEEGEL 446
Query: 1251 --NSDNGKVLSDEVQRDSPSGSDSPVDISLHALTGNLSHETIRISGHIHKHPILVLIDTG 1424
N ++ K+ +E D + + +S +A+ G +T + I+ + L+D+G
Sbjct: 447 TGNQEDCKLEKEEAPPDD-ENQEELMFVSHNAVYGTTRPDTFSVIIQINGRRAVGLVDSG 505
Query: 1425 STHSFIDSQ--LSDKLNLHVSPRGRCLL*WPMEIPPSIKAFVSTSLGRCRGYHFAHDLRA 1598
ST +F+D + + L + + ++ E+ ++ V + + +G F++
Sbjct: 506 STSTFMDQDYAVRNHCPLVSTDAKKVVVAGGGELKSEVQ--VPELVYQIQGETFSNKFNI 563
Query: 1599 LPLGGCDMVLGADWLRQLGDVQFNFAK 1679
+PL G D++LGADW+ + + + K
Sbjct: 564 IPLKGYDVILGADWIYKYSPITLDLKK 590
>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1611
Score = 370 bits (950), Expect(4) = 0.0
Identities = 183/355 (51%), Positives = 244/355 (68%)
Frame = +1
Query: 1876 VLDSFADVFEEPTALPPSRSLDHRIPLKPDVVPTSQKPYRCPYIQKSIVEELVK*ILTAG 2055
VL SF V +EP LPP RS DH I LK P + +PYR P+ QK +E+++ +
Sbjct: 678 VLQSFPKVLKEPKGLPPRRSCDHVINLKVGSEPPNLRPYRVPHFQKGAMEDIITELFRTQ 737
Query: 2056 FIQNSHSLFASPILLVKKKDGTLRFCVDYRKLNDQTIKDKYPILLIEELLDEFYGATIFS 2235
I+ S S + SP ++V+KKDG+ R CVDYR+LN QTIK+K+P+ +IE+LLDE +GA +FS
Sbjct: 738 EIRISDSPYVSPAVMVRKKDGSWRLCVDYRQLNAQTIKNKFPMPIIEDLLDELHGAKVFS 797
Query: 2236 KIDLRSGYH*ILVHAPDIPKTAFHTHHGHFEFLFMPFGLTNAPATFQALMNEIFQPFLHK 2415
K+DLRSGYH I + DIPKTAF TH GH+E+ MPFGLTNAPATFQALMN++ PFL K
Sbjct: 798 KLDLRSGYHQIRMAEGDIPKTAFRTHLGHYEYNVMPFGLTNAPATFQALMNQVLAPFLRK 857
Query: 2416 FALVFFDDILVYSSSLADHIIHL*QVFALLRQQSLFSK*SKCSFAHTTLEYLGHLINADG 2595
F LVFF DIL+YS + ++H+ H+ V L L + KC F + YLGH+I+++G
Sbjct: 858 FVLVFFADILIYSKTQSEHLEHIKLVMQALSANQLVVRLKKCEFGLDRVSYLGHIISSEG 917
Query: 2596 VAADPDKISAMEC*PQPQTLKQLRGFLGLTGYYRRFIQGYGNICKTLKYMLKKDDFSWSL 2775
V+ DP KIS ++ P+ + ++R FLG+ GYYRRFI+GYG IC+ L +LKKD F W
Sbjct: 918 VSTDPKKISDIKNRKPPKNVTEVREFLGMAGYYRRFIKGYGVICRPLHDLLKKDGFKWGD 977
Query: 2776 DAHVAFSSLKTAMTSTPVFALQDFTKIFVLETDACSRGVGALLMPDDRPIAFFRK 2940
AF LK M ++PV AL DF++ FV+ETDAC G+GA+LM RP+A+F K
Sbjct: 978 TQQEAFELLKEKMCNSPVLALPDFSQPFVIETDACGIGIGAVLMQKGRPLAYFSK 1032
Score = 312 bits (799), Expect(4) = 0.0
Identities = 153/348 (43%), Positives = 217/348 (62%), Gaps = 2/348 (0%)
Frame = +3
Query: 2925 SFFQKALGPKALALSTDEKEFLAIVIVVQKWKHYLSSSQFTINTDHQSLKYLIEKRFSTT 3104
++F KALGPKA A S EKE +AI+ ++KW+HY+ I TD QSLK+++ +R
Sbjct: 1028 AYFSKALGPKAAAQSVYEKEAIAILEALKKWRHYILGGSLIIKTDQQSLKFMMSQRLVEG 1087
Query: 3105 LQQRWLLKLMGFDYVIRYKKGSDNIVADVLSRLP-ASDSSCHALTLTHPQWTEDLISSYE 3281
+Q + LLKLM FDYVI YK G +N+VAD LSR P + C +T+ P+W +D+ SYE
Sbjct: 1088 IQHKLLLKLMEFDYVIEYKSGKENLVADALSRSPNLKEEQCLPITVVVPEWVQDIKRSYE 1147
Query: 3282 SDDLAQQYIAQLLIN-PIHQYYSYQHNILRYKGRLYVGSDNEIKXXXXXXXXXXXXXXXX 3458
D A + ++ + + ++Y + +L+YKGR+YVG EI+
Sbjct: 1148 EDIFAHKILSLIETDGDPERHYKLESGLLKYKGRIYVGETTEIRMLLLEAYHASYFGGHS 1207
Query: 3459 XIRGTYSRAKSHFFLPRMKHDIIEFVSACDTCQFNKGDHSFPSGLLQPLPIPEFAWQHIS 3638
IR TY R K F+ P +K + ++ C TCQ K +H GLL PL +P+ AW HI+
Sbjct: 1208 GIRATYHRIKQLFYWPGLKKQVEHYIRECPTCQITKAEHIHIPGLLNPLEVPDMAWTHIT 1267
Query: 3639 LDFIEGLPLSNIKNVILVVVDRLTKYSHFYYLCHPFTAMKIAKEFLAHVFKLHGLPSSIV 3818
+DFIEGLP S K+VILVVVDRLTKY+HF L HP+T ++ + F+ ++ KLHG+P IV
Sbjct: 1268 MDFIEGLPKSQGKDVILVVVDRLTKYAHFLALSHPYTVEQVVQIFMDNIHKLHGMPMVIV 1327
Query: 3819 SDRDKICVIQFWQALFKTLGTTVKLSTSYHPQTYGQTE*TNACVEQYL 3962
+DRD++ F+Q +FKT ++ ST++HPQT GQTE N C+E YL
Sbjct: 1328 TDRDRVFTSNFFQEIFKTQKVKLRFSTAHHPQTDGQTERVNQCLESYL 1375
Score = 130 bits (327), Expect(4) = 0.0
Identities = 65/156 (41%), Positives = 101/156 (64%), Gaps = 1/156 (0%)
Frame = +1
Query: 3970 MTSSYPKKWANWFPLAEWWFNTNFHSSLKMSPF*SLDGYQPRHLVFLHYLIFYFNSNS*D 4149
MT P+KW +W LAEWW+NT +H+S++M+PF +L GY P + + I S
Sbjct: 1378 MTFQEPQKWFSWLALAEWWYNTTYHTSIQMTPFQALYGYPPPQIT--EFAIPCNMSEEAR 1435
Query: 4150 LFARQRHYASTAPR*TV-QSSDRMKMFADRKRSDRVFAVGYMVFLKLQPYRKSYVDIRRN 4326
+ + + ++ ++ R+K +AD+ RS+R +G MV+LKLQPYR+ + IR +
Sbjct: 1436 VTLEDKALILQKLKSSIGEAQRRIKFYADKGRSERTLELGDMVYLKLQPYRQVAMGIRGS 1495
Query: 4327 FKLSSKYFGPFEVLQRIGVVAYRLKLPIGSCIHPVF 4434
KL SKY+GPF+V++++G VAY+L+LP G+ IHPVF
Sbjct: 1496 LKLRSKYYGPFKVIEKMGAVAYKLQLPDGAGIHPVF 1531
Score = 72.4 bits (176), Expect(4) = 0.0
Identities = 34/78 (43%), Positives = 47/78 (60%)
Frame = +3
Query: 4431 FYVSQLKMKIGSTAATLPQLPLVDHNSQFVLEPVSMLQTRFTIMAGLPIQQLLIQWSNSP 4610
F+VSQLK +G+ A +P LP + + Q EP ++LQ R P+ Q LI W N
Sbjct: 1531 FHVSQLKKHLGARAIPMPNLPAIGPDGQIKTEPAAVLQRRMIPRHNEPVTQWLILWENLT 1590
Query: 4611 PEDATWEDMAHIQAKFPD 4664
P +ATWED ++IQA FP+
Sbjct: 1591 PAEATWEDASYIQAAFPN 1608
Score = 70.1 bits (170), Expect = 9e-09
Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Frame = +3
Query: 420 GAVHREQGKFS----RHPKVDFPHFDGTNPRGWVLKCERYFYLHQLPESERVDMATIHFT 587
G RE +++ + P+++ F G +P W+ +CE++F + P + V++A H
Sbjct: 213 GTAAREGNQYAEAVIKGPRLEISLFTGEDPVDWLKQCEKFFEITGTPVDQWVNLAVAHLY 272
Query: 588 SKVDP*FLAYQQGKKCIPWDIFVQDLYARFEDVAHDNYVGSFNKLSQT-TSVEEYYDQFE 764
+ F + I W + + RF V F + Q +VE+Y D+FE
Sbjct: 273 GRAAKWFRGVGLPWQVITWPQWCAMVCTRFSTANTHEAVELFQNVKQYGMTVEQYIDKFE 332
Query: 765 HFKSFMVANNPHLPESFYTLSFISGLKEEIRPIVQMFNPETTSRSFYLAR 914
+ + ++P+L E ++T FISGL+ +I+ V P+ S++ A+
Sbjct: 333 EYMDLVRRDHPYLQEPYFTSCFISGLRGDIKHDVCGQKPQGLLESYWYAK 382
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 374 bits (961), Expect(4) = 0.0
Identities = 183/355 (51%), Positives = 250/355 (70%)
Frame = +1
Query: 1876 VLDSFADVFEEPTALPPSRSLDHRIPLKPDVVPTSQKPYRCPYIQKSIVEELVK*ILTAG 2055
VL F V +EP LPP R+ DH I LKP P +Q+PYR P+ QK +E ++ ++ +
Sbjct: 19 VLSQFPGVMKEPKGLPPRRACDHVINLKPGSEPPNQRPYRVPHYQKEAMENIISDLIQSK 78
Query: 2056 FIQNSHSLFASPILLVKKKDGTLRFCVDYRKLNDQTIKDKYPILLIEELLDEFYGATIFS 2235
I+ S S +A P ++V+K+DG+ R CVDYR+LN QT+K+K+P+ +IE+LLDE +GA IFS
Sbjct: 79 EIRFSDSPYACPAIMVRKRDGSWRMCVDYRQLNAQTVKNKFPMPIIEDLLDELHGARIFS 138
Query: 2236 KIDLRSGYH*ILVHAPDIPKTAFHTHHGHFEFLFMPFGLTNAPATFQALMNEIFQPFLHK 2415
K+DLRSGYH I + DIPKTAF TH GH+E+ MPFGLTNAPATFQ+LMN+ PFL K
Sbjct: 139 KLDLRSGYHQIRMAEEDIPKTAFKTHMGHYEYQVMPFGLTNAPATFQSLMNQALAPFLRK 198
Query: 2416 FALVFFDDILVYSSSLADHIIHL*QVFALLRQQSLFSK*SKCSFAHTTLEYLGHLINADG 2595
F LVFF DIL+YS + +HI H+ V +L + L + KC+F +++ YLGH+I++DG
Sbjct: 199 FVLVFFYDILIYSKTREEHIKHIKAVLQVLEKNQLVVRLKKCAFGLSSVAYLGHVISSDG 258
Query: 2596 VAADPDKISAMEC*PQPQTLKQLRGFLGLTGYYRRFIQGYGNICKTLKYMLKKDDFSWSL 2775
VA DP KIS + +P+ + ++R FLG+TGYYRRFI+GYG IC+ L MLKK F+W L
Sbjct: 259 VATDPSKISDIMNRKEPKNVTEVREFLGMTGYYRRFIKGYGLICRPLHDMLKKGGFNWGL 318
Query: 2776 DAHVAFSSLKTAMTSTPVFALQDFTKIFVLETDACSRGVGALLMPDDRPIAFFRK 2940
AF+ LK + ++PV AL +F + FV+E DAC G+GA+LM RPIA++ K
Sbjct: 319 AQSEAFTELKGKLCTSPVLALPNFEQPFVIEADACEVGIGAVLMQAGRPIAYYSK 373
Score = 298 bits (762), Expect(4) = 0.0
Identities = 148/351 (42%), Positives = 213/351 (60%), Gaps = 5/351 (1%)
Frame = +3
Query: 2925 SFFQKALGPKALALSTDEKEFLAIVIVVQKWKHYLSSSQFTINTDHQSLKYLIEKRFSTT 3104
+++ KALGPKA A S EKE +AI+ +++W+HY+ + I TD QSLKY++ +R
Sbjct: 369 AYYSKALGPKAAAQSIYEKEAMAILEALKRWRHYVLGGELVIKTDQQSLKYMMNQRLVEG 428
Query: 3105 LQQRWLLKLMGFDYVIRYKKGSDNIVADVLSRLPASDSS----CHALTLTHPQWTEDLIS 3272
+Q + LLKLM ++Y I YK G +N+VAD LSR P + C A+ + P+W D+
Sbjct: 429 IQHKLLLKLMEYNYTIEYKAGRENLVADALSRSPKNKEEVTELCAAIAVVVPEWILDIKR 488
Query: 3273 SYESDDLAQQYIAQL-LINPIHQYYSYQHNILRYKGRLYVGSDNEIKXXXXXXXXXXXXX 3449
SYE D A + ++ + Y ++ I++YKGR+YVG EI+
Sbjct: 489 SYEEDVQAHKLLSLIGTAGDPEGEYKFEAGIMKYKGRIYVGETGEIRGQLIQAYHSSTFG 548
Query: 3450 XXXXIRGTYSRAKSHFFLPRMKHDIIEFVSACDTCQFNKGDHSFPSGLLQPLPIPEFAWQ 3629
IR TY R K F+ P +K + + C CQ K +H GLL PL +P+ AW
Sbjct: 549 GHCGIRATYQRIKKLFYWPGLKKGVENHIRNCPVCQVTKSEHVHIPGLLNPLEVPDMAWT 608
Query: 3630 HISLDFIEGLPLSNIKNVILVVVDRLTKYSHFYYLCHPFTAMKIAKEFLAHVFKLHGLPS 3809
HIS+DF+EGLP S K+VILVVVDRLTKY+HF L HP+T ++ + F+ ++ KLHG+P
Sbjct: 609 HISMDFVEGLPKSKGKDVILVVVDRLTKYAHFIALSHPYTVEEVVQVFMDNIHKLHGMPI 668
Query: 3810 SIVSDRDKICVIQFWQALFKTLGTTVKLSTSYHPQTYGQTE*TNACVEQYL 3962
+IV+DRD++ F+Q +FK+ ++ ST+YHPQT GQTE N C+E YL
Sbjct: 669 AIVTDRDRVFTSTFFQEVFKSQKVQLRFSTAYHPQTDGQTERVNQCLESYL 719
Score = 133 bits (334), Expect(4) = 0.0
Identities = 65/157 (41%), Positives = 100/157 (63%), Gaps = 1/157 (0%)
Frame = +1
Query: 3967 CMTSSYPKKWANWFPLAEWWFNTNFHSSLKMSPF*SLDGYQPRHLVFLHYLIFYFNSNS* 4146
CMT P+ W +W LAEWW+NT +H++++M+PF +L GY P + + + S
Sbjct: 721 CMTFQEPQNWCSWIALAEWWYNTTYHTAIQMTPFKALYGYSPPQI--SEFSVPCDVSQEA 778
Query: 4147 DLFARQRHYASTAPR*TVQSSD-RMKMFADRKRSDRVFAVGYMVFLKLQPYRKSYVDIRR 4323
+ ++ + +++ + RMK +ADR R++R VG MV+LKLQPYR++ IR
Sbjct: 779 RVTLEEKETIVQKLKASMEDAQRRMKYYADRNRTERKLEVGDMVYLKLQPYRQNAFGIRG 838
Query: 4324 NFKLSSKYFGPFEVLQRIGVVAYRLKLPIGSCIHPVF 4434
+ KL KY+GPF+VL+++G VAYRL+LP + IHPVF
Sbjct: 839 SLKLRGKYYGPFKVLEKVGAVAYRLQLPEEAAIHPVF 875
Score = 72.0 bits (175), Expect(4) = 0.0
Identities = 35/78 (44%), Positives = 48/78 (61%)
Frame = +3
Query: 4431 FYVSQLKMKIGSTAATLPQLPLVDHNSQFVLEPVSMLQTRFTIMAGLPIQQLLIQWSNSP 4610
F+VSQLK +G+ A +P LP V + Q EPV++LQ R + + Q LI WSN
Sbjct: 875 FHVSQLKKHLGTHAVPMPNLPAVGPDGQIKTEPVAVLQRRMIPRNNVAVTQWLILWSNLT 934
Query: 4611 PEDATWEDMAHIQAKFPD 4664
P +ATWED ++IQ FP+
Sbjct: 935 PAEATWEDASYIQKVFPN 952
>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1475
Score = 376 bits (966), Expect(4) = 0.0
Identities = 181/357 (50%), Positives = 244/357 (68%)
Frame = +1
Query: 1870 STVLDSFADVFEEPTALPPSRSLDHRIPLKPDVVPTSQKPYRCPYIQKSIVEELVK*ILT 2049
S ++ F V +EP LPP R DH I L+ VP + +PYR P+ QK +E ++ ++
Sbjct: 538 SDIIQQFPAVLKEPKGLPPKRECDHVINLQSGAVPPNIRPYRVPHYQKEAMENIINELIE 597
Query: 2050 AGFIQNSHSLFASPILLVKKKDGTLRFCVDYRKLNDQTIKDKYPILLIEELLDEFYGATI 2229
+ IQ S S ++SP ++V+KKDG+ R CVDYR+LN QT+K+K+P+ +IE+LLDE GA I
Sbjct: 598 SKEIQTSDSPYSSPAVMVRKKDGSWRMCVDYRQLNAQTVKNKFPMPIIEDLLDELNGARI 657
Query: 2230 FSKIDLRSGYH*ILVHAPDIPKTAFHTHHGHFEFLFMPFGLTNAPATFQALMNEIFQPFL 2409
FSK+DLRSGYH I + D+ KTAF TH GH+E+ MPFGLTN PATFQ+LMN + PFL
Sbjct: 658 FSKLDLRSGYHQIRMAEKDVHKTAFRTHLGHYEYQVMPFGLTNDPATFQSLMNHVLAPFL 717
Query: 2410 HKFALVFFDDILVYSSSLADHIIHL*QVFALLRQQSLFSK*SKCSFAHTTLEYLGHLINA 2589
+F LVFFDDIL+YS + A+H+ H+ V L+ L K KC+F ++ YLGH+I+
Sbjct: 718 RRFVLVFFDDILIYSKTRAEHLEHVKLVMQALQDNHLVIKLKKCAFGLASVSYLGHVISQ 777
Query: 2590 DGVAADPDKISAMEC*PQPQTLKQLRGFLGLTGYYRRFIQGYGNICKTLKYMLKKDDFSW 2769
DGVA DP K+ ++ P P+ + +R FLG+TGYYRRFIQGYG IC+ + MLKK+ F W
Sbjct: 778 DGVATDPKKVGKIKNWPTPKDVTDVRKFLGMTGYYRRFIQGYGTICRPIHDMLKKNGFQW 837
Query: 2770 SLDAHVAFSSLKTAMTSTPVFALQDFTKIFVLETDACSRGVGALLMPDDRPIAFFRK 2940
D AF +LK + ++PV AL DF + F +E DAC G+GA+LM RPIAFF K
Sbjct: 838 GADQTTAFETLKHKLRTSPVLALPDFDQAFTIEADACGVGIGAVLMQGGRPIAFFSK 894
Score = 300 bits (768), Expect(4) = 0.0
Identities = 150/351 (42%), Positives = 217/351 (61%), Gaps = 5/351 (1%)
Frame = +3
Query: 2925 SFFQKALGPKALALSTDEKEFLAIVIVVQKWKHYLSSSQFTINTDHQSLKYLIEKRFSTT 3104
+FF KALGPKA S EKE +AI+ ++KW+HY+ S+ I TD QSLK+++ +R
Sbjct: 890 AFFSKALGPKAAGQSIYEKEAMAILEALKKWRHYVLGSKLIIKTDQQSLKFMMGQRLVEG 949
Query: 3105 LQQRWLLKLMGFDYVIRYKKGSDNIVADVLSRLPASDS---SCHALTLTHPQWTEDLISS 3275
+Q + LLKLM +DY I YK G +N+VAD LSRLP ++ CH +T+ P+W D+ S
Sbjct: 950 IQHKLLLKLMEYDYTIEYKSGKENLVADALSRLPQKEAVADRCHPMTVVIPEWIVDIQRS 1009
Query: 3276 YESDDLAQQYIAQL--LINPIHQYYSYQHNILRYKGRLYVGSDNEIKXXXXXXXXXXXXX 3449
YE+D A + ++ + +P +Y + +L+YKGR+YVG +I+
Sbjct: 1010 YENDVQAHKILSLIGTAADPDREY-KLEAGLLKYKGRIYVGEATDIRRQLITTYHSSSFG 1068
Query: 3450 XXXXIRGTYSRAKSHFFLPRMKHDIIEFVSACDTCQFNKGDHSFPSGLLQPLPIPEFAWQ 3629
+R T+ R K F+ M+ ++ F+ C TCQ K +H GLL PL IP+ AW
Sbjct: 1069 GHSGMRATHHRIKMLFYWHGMRGEVERFIRECPTCQITKSEHVHIPGLLNPLEIPDMAWT 1128
Query: 3630 HISLDFIEGLPLSNIKNVILVVVDRLTKYSHFYYLCHPFTAMKIAKEFLAHVFKLHGLPS 3809
HI++DFIEGLP S K+VILVVVDRLTKY+HF L HP+ ++ + F+ ++ KLHG+P
Sbjct: 1129 HITMDFIEGLPKSQGKDVILVVVDRLTKYAHFIALAHPYDVEQVVEAFMNNIHKLHGMPM 1188
Query: 3810 SIVSDRDKICVIQFWQALFKTLGTTVKLSTSYHPQTYGQTE*TNACVEQYL 3962
I++DRD+I +Q +FK + ++ ST+YHPQ GQTE N C+E YL
Sbjct: 1189 VIITDRDRIFTSSLFQEIFKAMKVKLRFSTAYHPQMDGQTERVNQCLESYL 1239
Score = 127 bits (319), Expect(4) = 0.0
Identities = 64/155 (41%), Positives = 95/155 (61%)
Frame = +1
Query: 3970 MTSSYPKKWANWFPLAEWWFNTNFHSSLKMSPF*SLDGYQPRHLVFLHYLIFYFNSNS*D 4149
MT P KW +W LAEWW+NT FH++++M+PF ++ GY P + + + +
Sbjct: 1242 MTFQEPHKWYSWLALAEWWYNTTFHTAIQMTPFKAMYGYSPPQINEFS-VPCNISEEARV 1300
Query: 4150 LFARQRHYASTAPR*TVQSSDRMKMFADRKRSDRVFAVGYMVFLKLQPYRKSYVDIRRNF 4329
+ + + RMK FAD+ R++R VG MV+LKL+PYR+S IR +
Sbjct: 1301 TIEEKEAILNKLKNSLADAQHRMKYFADKNRTERNLEVGDMVYLKLKPYRQSAFGIRGSL 1360
Query: 4330 KLSSKYFGPFEVLQRIGVVAYRLKLPIGSCIHPVF 4434
KL SK++GPF+VLQ+IG +AY+L+LP + IHPVF
Sbjct: 1361 KLRSKFYGPFKVLQKIGQLAYKLQLPDDAQIHPVF 1395
Score = 68.2 bits (165), Expect(4) = 0.0
Identities = 34/77 (44%), Positives = 45/77 (58%)
Frame = +3
Query: 4431 FYVSQLKMKIGSTAATLPQLPLVDHNSQFVLEPVSMLQTRFTIMAGLPIQQLLIQWSNSP 4610
F+VSQLK +G A + LP V + Q EP+++LQ R G+ + Q LI W N
Sbjct: 1395 FHVSQLKKHLGKHAIPMSNLPSVGPDGQIKTEPLAVLQRRMVPRKGVAVTQWLILWQNLS 1454
Query: 4611 PEDATWEDMAHIQAKFP 4661
P +ATWED + IQA FP
Sbjct: 1455 PAEATWEDASVIQAMFP 1471
Score = 70.9 bits (172), Expect = 6e-09
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 1/156 (0%)
Frame = +3
Query: 459 PKVDFPHFDGTNPRGWVLKCERYFYLHQLPESERVDMATIHFTSKVDP*FLAYQQGKKCI 638
P+++ P F G +P W+ +CE++F + P + V++A H + F + I
Sbjct: 96 PRLEIPLFSGEDPIDWLKQCEKFFEITGTPLDQWVNLAVAHLNGRALKWFGGIGLPWQVI 155
Query: 639 PWDIFVQDLYARFEDVAHDNYVGSFNKLSQT-TSVEEYYDQFEHFKSFMVANNPHLPESF 815
W + + RF + + F + Q T+VE+Y D+FE + + ++P+L E +
Sbjct: 156 AWPQWCSMVCTRFSAASEHEAIELFQNVKQFGTTVEQYIDKFEDYVDLVKRDHPYLQEQY 215
Query: 816 YTLSFISGLKEEIRPIVQMFNPETTSRSFYLARIQQ 923
T FI GL+ +I+ V P+ +++ A ++
Sbjct: 216 LTSCFIGGLRADIKYDVCGQKPQGLLETYWAANARK 251
>gb|ABA97970.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1548
Score = 390 bits (1001), Expect(4) = 0.0
Identities = 201/356 (56%), Positives = 245/356 (68%), Gaps = 1/356 (0%)
Frame = +1
Query: 1876 VLDSFADVFEEPTALPPSRSLDHRIPLKPDVVPTSQKPYRCPYIQKSIVEELVK*ILTAG 2055
+L F VF++ LPP R LDH I L P+ VP + +PYR QK +E V +L+AG
Sbjct: 590 LLQEFQSVFQDSNTLPPHRVLDHVISLLPNSVPVNARPYRYSPAQKDEIERQVSTMLSAG 649
Query: 2056 FIQNSHSLFASPILLVKKKDGTLRFCVDYRKLNDQTIKDKYPILLIEELLDEFYGATIFS 2235
I S S FASP+LLVKKKD + RFCVDYR+LND TIK+K+P+ +++ELLDE G FS
Sbjct: 650 LISPSCSPFASPVLLVKKKDNSWRFCVDYRRLNDLTIKNKFPLPIVDELLDELAGTQFFS 709
Query: 2236 KIDLRSGYH*ILVHAPDIPKTAFHTHHGHFEFLFMPFGLTNAPATFQALMNEIFQPFLHK 2415
K+DLRSGYH I + D KTAF THHGHF+F MPFGLTNAPATFQ LMN IF P+L K
Sbjct: 710 KLDLRSGYHQIRMQESDEFKTAFKTHHGHFQFRVMPFGLTNAPATFQCLMNSIFAPYLRK 769
Query: 2416 FALVFFDDILVYSSSLADHIIHL*QVFALLRQQSLFSK*SKCSFAHTTLEYLGHLINADG 2595
F LVF DDILVYS S DH+ HL V LL+Q L +K SKCSFA LEYLGH+I+A G
Sbjct: 770 FVLVFMDDILVYSKSWTDHLKHLRCVLQLLQQHQLCAKLSKCSFAAPQLEYLGHIISAAG 829
Query: 2596 VAADPDKISAMEC*PQPQTLKQLRGFLGLTGYYRRFIQGYGNICKTLKYMLKKD-DFSWS 2772
VA D +K M P P L +LRGFLGLTGYYR+F++ YG + K L +LKK+ F W+
Sbjct: 830 VATDAEKTKVMLQWPVPTNLTELRGFLGLTGYYRKFVKNYGILAKPLTVLLKKNVKFVWT 889
Query: 2773 LDAHVAFSSLKTAMTSTPVFALQDFTKIFVLETDACSRGVGALLMPDDRPIAFFRK 2940
AF SLK AM+STPV L +F K F +ETDACS G+GA+L + P+AF+ K
Sbjct: 890 EHTQKAFDSLKLAMSSTPVLVLPNFAKPFTIETDACSTGIGAVLSQEGHPVAFYSK 945
Score = 293 bits (750), Expect(4) = 0.0
Identities = 152/347 (43%), Positives = 214/347 (61%), Gaps = 1/347 (0%)
Frame = +3
Query: 2925 SFFQKALGPKALALSTDEKEFLAIVIVVQKWKHYLSSSQFTINTDHQSLKYLIEKRFSTT 3104
+F+ KALG LS EKEFLAI++ + KW+ YL F I TDHQSL +L ++ +
Sbjct: 941 AFYSKALGINNQKLSIYEKEFLAIMMAIDKWRPYLLRGPFVIRTDHQSLCHLDDQLLGSE 1000
Query: 3105 LQQRWLLKLMGFDYVIRYKKGSDNIVADVLSRLPASDSSCHALTLTHPQWTEDLISSYES 3284
LQ++ + KL+G Y +YK+G++N AD LSR+ S A+++ P W +++++SY
Sbjct: 1001 LQRKAMTKLIGLQYKFQYKRGAENKSADALSRV-GHFFSLQAISIAQPVWVQEVVNSYVV 1059
Query: 3285 DDLAQQYIAQLLI-NPIHQYYSYQHNILRYKGRLYVGSDNEIKXXXXXXXXXXXXXXXXX 3461
D+ AQ + +L I +P +S H +++ KGR+++G+++ +
Sbjct: 1060 DNQAQSLLTELAIMSPNASGFSLVHGLIKKKGRIWLGANSALHTKIISSFHDSAIGGHSG 1119
Query: 3462 IRGTYSRAKSHFFLPRMKHDIIEFVSACDTCQFNKGDHSFPSGLLQPLPIPEFAWQHISL 3641
+ TY R K F +KH + EF+ C CQ K +H GLLQPLPIP AWQ IS+
Sbjct: 1120 VMATYHRVKKLFVWKGLKHSVEEFIQQCVVCQKAKHEHCSSPGLLQPLPIPTGAWQDISM 1179
Query: 3642 DFIEGLPLSNIKNVILVVVDRLTKYSHFYYLCHPFTAMKIAKEFLAHVFKLHGLPSSIVS 3821
DFIEGLPLS +VILVVVDR TKY+HF L HPFTA+++A +L+ V L+G+P SIVS
Sbjct: 1180 DFIEGLPLSKGSDVILVVVDRFTKYAHFLPLKHPFTAVQVADNYLSKVASLYGMPKSIVS 1239
Query: 3822 DRDKICVIQFWQALFKTLGTTVKLSTSYHPQTYGQTE*TNACVEQYL 3962
DRDKI FWQ LFK + L+T+YHPQ+ GQTE N C+E YL
Sbjct: 1240 DRDKIFTSHFWQHLFKRFAIPLNLTTAYHPQSDGQTERVNQCLEMYL 1286
Score = 129 bits (323), Expect(4) = 0.0
Identities = 74/165 (44%), Positives = 96/165 (58%), Gaps = 9/165 (5%)
Frame = +1
Query: 3967 CMTSSYPKKWANWFPLAEWWFNTNFHSSLKMSPF*SLDGYQPRHLVFLHYLIFYFNSNS* 4146
C +S P KW++W PLA++W+NT+FHS+LK SP +L G P + + L S
Sbjct: 1288 CAVASAPTKWSSWLPLAQYWYNTSFHSALKCSPHKALYGTDPTYGLLPAPLTDDAEQTSD 1347
Query: 4147 DL--------FARQRHYASTA-PR*TVQSSDRMKMFADRKRSDRVFAVGYMVFLKLQPYR 4299
D+ ++R ST + +RMK FAD KR+ R F VG +V LKLQPY
Sbjct: 1348 DIDDSSGVSALLKERELFSTMLQHHLARDQNRMKQFADAKRTARSFQVGDLVLLKLQPYA 1407
Query: 4300 KSYVDIRRNFKLSSKYFGPFEVLQRIGVVAYRLKLPIGSCIHPVF 4434
+ V R KL+ KYFGPFE+L +G VAYRLKLP S IHPVF
Sbjct: 1408 QRSVIARPFPKLAFKYFGPFEILAVVGSVAYRLKLPADSLIHPVF 1452
Score = 56.2 bits (134), Expect(4) = 0.0
Identities = 29/80 (36%), Positives = 41/80 (51%)
Frame = +3
Query: 4431 FYVSQLKMKIGSTAATLPQLPLVDHNSQFVLEPVSMLQTRFTIMAGLPIQQLLIQWSNSP 4610
F+VSQLK + T QLP L P ++L+ R I Q+L+QW + P
Sbjct: 1452 FHVSQLKSFVPDTKPVFAQLPTAAQLDIADLIPSAVLERRLVKKGNAAIVQVLVQWGSLP 1511
Query: 4611 PEDATWEDMAHIQAKFPDLI 4670
P ATWED ++ +FPD +
Sbjct: 1512 PALATWEDYDVVRTRFPDAV 1531
Score = 152 bits (384), Expect = 1e-33
Identities = 119/418 (28%), Positives = 185/418 (44%), Gaps = 4/418 (0%)
Frame = +3
Query: 459 PKVDFPHFDGTNPRGWVLKCERYFYLHQLPESERVDMATIHFTSKVDP*FLAYQQGKKCI 638
PK+DFP FDGT+ R W+ CE YF +Q+ E +V A+++ + A++
Sbjct: 149 PKMDFPRFDGTDVRVWLDNCETYFGFYQITEGFQVSAASLNMIGDAANWYQAWKLETGWH 208
Query: 639 PWDIFVQDLYARFEDVAHDNYVGSFNKLSQTTSVEEYYDQFEHFKSFMVANNPHLPESFY 818
W+ + FE + L+QT SV EY +F + +P L ++F
Sbjct: 209 NWESLKTAVLNEFEVNLESVKMDELLLLTQTGSVTEYRSKFNQLVYQLRLYDPLLSDTFL 268
Query: 819 TLSFISGLKEEIRPIVQMFNPETTSRSFYLARIQQADVQHNPKPLKPHTKPFYPTPLSVS 998
F+ GLK+E+R VQ P + S++ YL + Q K H K +
Sbjct: 269 IRHFLLGLKDELRSAVQAQQPTSVSQA-YLVALAHESAQLGTGTKKGHYKKEHVAIRG-- 325
Query: 999 HPPSTVKPIFSNSSTYHKQPSXXXXXXXXXXXXXXKSDPPIKRLTPIQMKA-RRDQGLCY 1175
T K + + Q Q+K RR QGLC+
Sbjct: 326 ----TDKLKLAPGELWKAQ----------------------------QLKEYRRAQGLCF 353
Query: 1176 NCEEFYRPGHMCRTQQLFMLVAEGENSDNGKVLSDEVQRDSPS---GSDSPVDISLHALT 1346
C E Y PGH+C Q+ L A ++ +VLSDEV + SDS + +SLHA+
Sbjct: 354 KCGEKYAPGHVCAKQEGVQLKALHVQEES-EVLSDEVLDAITALDVSSDS-ISLSLHAMA 411
Query: 1347 GNLSHETIRISGHIHKHPILVLIDTGSTHSFIDSQLSDKLNLHVSPRGRCLL*WPMEIPP 1526
G T+++ + I++L+D+GSTHSFID+ L +L L +
Sbjct: 412 GTCPSHTVQLRALVQNQVIIILVDSGSTHSFIDAGLCHRLQLSTESIQPTSVRVANGETL 471
Query: 1527 SIKAFVSTSLGRCRGYHFAHDLRALPLGGCDMVLGADWLRQLGDVQFNFAKLRISFQH 1700
+A V +G+ F+ +R LP+GG D+VLG DWL Q + ++A ++ F +
Sbjct: 472 CCEAKVPQFAWWVQGHEFSFPMRVLPMGGYDLVLGMDWLTQFSPMTCDWAAKQLQFSY 529
>gb|AAX95226.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1513
Score = 376 bits (966), Expect(4) = 0.0
Identities = 183/355 (51%), Positives = 244/355 (68%)
Frame = +1
Query: 1876 VLDSFADVFEEPTALPPSRSLDHRIPLKPDVVPTSQKPYRCPYIQKSIVEELVK*ILTAG 2055
+L F V E+P LPP R DH I LK +P + +PYR P+ QK +E+++ ++ +
Sbjct: 610 ILQRFPTVLEKPKGLPPQRGCDHVITLKDGAIPPNLRPYRVPHHQKEAMEKIIAELIESK 669
Query: 2056 FIQNSHSLFASPILLVKKKDGTLRFCVDYRKLNDQTIKDKYPILLIEELLDEFYGATIFS 2235
IQ S+S ++SP ++V+KKDG+ R CVDYR+LN QT+K+K+P+ +IE+LLDE GA IF+
Sbjct: 670 EIQVSNSPYSSPAVMVRKKDGSWRLCVDYRQLNAQTVKNKFPMPIIEDLLDELNGAKIFT 729
Query: 2236 KIDLRSGYH*ILVHAPDIPKTAFHTHHGHFEFLFMPFGLTNAPATFQALMNEIFQPFLHK 2415
K+DL SGYH I + PDIPKTAF TH GH+E+ MPFGLTNAPATFQ+LMN++ PF K
Sbjct: 730 KLDLMSGYHQIRMSRPDIPKTAFRTHLGHYEYQVMPFGLTNAPATFQSLMNQVLAPFFRK 789
Query: 2416 FALVFFDDILVYSSSLADHIIHL*QVFALLRQQSLFSK*SKCSFAHTTLEYLGHLINADG 2595
F LVFFDDIL+YS +H H+ V +L+ +L K KC+F +++ YLGH+I+ +G
Sbjct: 790 FVLVFFDDILIYSKDREEHKEHIRLVLQVLKANNLVIKPKKCAFGLSSVSYLGHIISQNG 849
Query: 2596 VAADPDKISAMEC*PQPQTLKQLRGFLGLTGYYRRFIQGYGNICKTLKYMLKKDDFSWSL 2775
VA DP K+ + P P+ + LR FLG+TGYYRRFIQGY IC+ L MLKK+ F W
Sbjct: 850 VATDPGKVEKIVSWPIPKNVTDLRKFLGMTGYYRRFIQGYVLICRPLHDMLKKEGFQWGE 909
Query: 2776 DAHVAFSSLKTAMTSTPVFALQDFTKIFVLETDACSRGVGALLMPDDRPIAFFRK 2940
AF LK M S+PV L DF+K F +E DAC G+GA+LM DRPIAF+ K
Sbjct: 910 KQTEAFKFLKQKMCSSPVLTLPDFSKEFTIEADACGTGIGAVLMQGDRPIAFYSK 964
Score = 308 bits (789), Expect(4) = 0.0
Identities = 152/350 (43%), Positives = 222/350 (63%), Gaps = 4/350 (1%)
Frame = +3
Query: 2925 SFFQKALGPKALALSTDEKEFLAIVIVVQKWKHYLSSSQFTINTDHQSLKYLIEKRFSTT 3104
+F+ K+LGPKA A S EKE +AI+ ++KW+HY S+ I TD QSLK+++ +R
Sbjct: 960 AFYSKSLGPKAAAQSIYEKEAMAILEALKKWRHYFLGSKLVIKTDQQSLKHMMNQRLVEG 1019
Query: 3105 LQQRWLLKLMGFDYVIRYKKGSDNIVADVLSRLPASDSS---CHALTLTHPQWTEDLISS 3275
+Q + LLKLM +DY+I YK G DN+VAD LSRLP C+A+T+ P+W D+ +S
Sbjct: 1020 IQHKLLLKLMEYDYIIEYKAGKDNVVADALSRLPQDQLQTEICNAITVVIPKWIIDVQNS 1079
Query: 3276 YESDDLAQQYIAQLLINPI-HQYYSYQHNILRYKGRLYVGSDNEIKXXXXXXXXXXXXXX 3452
YE D A + ++ + N Q+YS+++ ILR+KGR+YVG + I+
Sbjct: 1080 YEGDVQAHKILSMIGTNSDPDQHYSFENGILRFKGRIYVGEETSIRTNLIRDYHCSAFGG 1139
Query: 3453 XXXIRGTYSRAKSHFFLPRMKHDIIEFVSACDTCQFNKGDHSFPSGLLQPLPIPEFAWQH 3632
+R T+ R K+ F+ P +K + F+ C CQ K +H GLL PL + + AW H
Sbjct: 1140 HSGMRATHHRIKALFYWPGLKKTVEMFIRECPVCQITKVEHIHIPGLLNPLEVLDMAWTH 1199
Query: 3633 ISLDFIEGLPLSNIKNVILVVVDRLTKYSHFYYLCHPFTAMKIAKEFLAHVFKLHGLPSS 3812
I++DFIEGLP S K+ ILVVVDRLTKY+HF L HP++ ++ + F+ ++ +LHG+P +
Sbjct: 1200 ITMDFIEGLPKSKWKDAILVVVDRLTKYAHFLALSHPYSVEQVVEIFMNNIHRLHGMPMA 1259
Query: 3813 IVSDRDKICVIQFWQALFKTLGTTVKLSTSYHPQTYGQTE*TNACVEQYL 3962
I+ DRD+I Q +Q +FK++ ++ STSYHPQT GQTE N C+E YL
Sbjct: 1260 IIIDRDRIFTSQLFQEIFKSMKVQLRFSTSYHPQTDGQTERVNQCLESYL 1309
Score = 108 bits (271), Expect(4) = 0.0
Identities = 59/155 (38%), Positives = 88/155 (56%)
Frame = +1
Query: 3970 MTSSYPKKWANWFPLAEWWFNTNFHSSLKMSPF*SLDGYQPRHLVFLHYLIFYFNSNS*D 4149
MT P +W +W LA WW+NT +H+SL+M+PF +L GY P + +
Sbjct: 1312 MTFQEPHQWYSWLSLAGWWYNTTYHTSLQMTPFQALYGYPPPQI---------------N 1356
Query: 4150 LFARQRHYASTAPR*TVQSSDRMKMFADRKRSDRVFAVGYMVFLKLQPYRKSYVDIRRNF 4329
F+ + ++ A R++R VG MV++KLQPYR++ IR +
Sbjct: 1357 EFSISCNVSAEA------------------RTERSLNVGDMVYIKLQPYRQTAFGIRGSL 1398
Query: 4330 KLSSKYFGPFEVLQRIGVVAYRLKLPIGSCIHPVF 4434
KL SK++GPF+VL++IG VAY+L+LP + IHPVF
Sbjct: 1399 KLRSKFYGPFKVLEKIGQVAYKLQLPEDASIHPVF 1433
Score = 67.0 bits (162), Expect(4) = 0.0
Identities = 33/77 (42%), Positives = 45/77 (58%)
Frame = +3
Query: 4431 FYVSQLKMKIGSTAATLPQLPLVDHNSQFVLEPVSMLQTRFTIMAGLPIQQLLIQWSNSP 4610
F+VSQLK +G A + LP + + Q +PV++LQ R G+ + Q LI W N
Sbjct: 1433 FHVSQLKKHLGQRAVPMSNLPSMGPDGQIKTQPVAVLQRRMIPRNGVAVTQWLILWENLG 1492
Query: 4611 PEDATWEDMAHIQAKFP 4661
P DATWED A IQ+ +P
Sbjct: 1493 PADATWEDAAVIQSMYP 1509
>gb|ABA91843.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1411
Score = 376 bits (966), Expect(4) = 0.0
Identities = 183/355 (51%), Positives = 244/355 (68%)
Frame = +1
Query: 1876 VLDSFADVFEEPTALPPSRSLDHRIPLKPDVVPTSQKPYRCPYIQKSIVEELVK*ILTAG 2055
+L F V E+P LPP R DH I LK +P + +PYR P+ QK +E+++ ++ +
Sbjct: 508 ILQRFPTVLEKPKGLPPQRGCDHVITLKDGAIPPNLRPYRVPHHQKEAMEKIIAELIESK 567
Query: 2056 FIQNSHSLFASPILLVKKKDGTLRFCVDYRKLNDQTIKDKYPILLIEELLDEFYGATIFS 2235
IQ S+S ++SP ++V+KKDG+ R CVDYR+LN QT+K+K+P+ +IE+LLDE GA IF+
Sbjct: 568 EIQVSNSPYSSPAVMVRKKDGSWRLCVDYRQLNAQTVKNKFPMPIIEDLLDELNGAKIFT 627
Query: 2236 KIDLRSGYH*ILVHAPDIPKTAFHTHHGHFEFLFMPFGLTNAPATFQALMNEIFQPFLHK 2415
K+DL SGYH I + PDIPKTAF TH GH+E+ MPFGLTNAPATFQ+LMN++ PF K
Sbjct: 628 KLDLMSGYHQIRMSRPDIPKTAFRTHLGHYEYQVMPFGLTNAPATFQSLMNQVLAPFFRK 687
Query: 2416 FALVFFDDILVYSSSLADHIIHL*QVFALLRQQSLFSK*SKCSFAHTTLEYLGHLINADG 2595
F LVFFDDIL+YS +H H+ V +L+ +L K KC+F +++ YLGH+I+ +G
Sbjct: 688 FVLVFFDDILIYSKDREEHKEHIRLVLQVLKANNLVIKPKKCAFGLSSVSYLGHIISQNG 747
Query: 2596 VAADPDKISAMEC*PQPQTLKQLRGFLGLTGYYRRFIQGYGNICKTLKYMLKKDDFSWSL 2775
VA DP K+ + P P+ + LR FLG+TGYYRRFIQGY IC+ L MLKK+ F W
Sbjct: 748 VATDPGKVEKIVSWPIPKNVTDLRKFLGMTGYYRRFIQGYVLICRPLHDMLKKEGFQWGE 807
Query: 2776 DAHVAFSSLKTAMTSTPVFALQDFTKIFVLETDACSRGVGALLMPDDRPIAFFRK 2940
AF LK M S+PV L DF+K F +E DAC G+GA+LM DRPIAF+ K
Sbjct: 808 KQTEAFKFLKQKMCSSPVLTLPDFSKEFTIEADACGTGIGAVLMQGDRPIAFYSK 862
Score = 308 bits (789), Expect(4) = 0.0
Identities = 152/350 (43%), Positives = 222/350 (63%), Gaps = 4/350 (1%)
Frame = +3
Query: 2925 SFFQKALGPKALALSTDEKEFLAIVIVVQKWKHYLSSSQFTINTDHQSLKYLIEKRFSTT 3104
+F+ K+LGPKA A S EKE +AI+ ++KW+HY S+ I TD QSLK+++ +R
Sbjct: 858 AFYSKSLGPKAAAQSIYEKEAMAILEALKKWRHYFLGSKLVIKTDQQSLKHMMNQRLVEG 917
Query: 3105 LQQRWLLKLMGFDYVIRYKKGSDNIVADVLSRLPASDSS---CHALTLTHPQWTEDLISS 3275
+Q + LLKLM +DY+I YK G DN+VAD LSRLP C+A+T+ P+W D+ +S
Sbjct: 918 IQHKLLLKLMEYDYIIEYKAGKDNVVADALSRLPQDQLQTEICNAITVVIPKWIIDVQNS 977
Query: 3276 YESDDLAQQYIAQLLINPI-HQYYSYQHNILRYKGRLYVGSDNEIKXXXXXXXXXXXXXX 3452
YE D A + ++ + N Q+YS+++ ILR+KGR+YVG + I+
Sbjct: 978 YEGDVQAHKILSMIGTNSDPDQHYSFENGILRFKGRIYVGEETSIRTNLIRDYHCSAFGG 1037
Query: 3453 XXXIRGTYSRAKSHFFLPRMKHDIIEFVSACDTCQFNKGDHSFPSGLLQPLPIPEFAWQH 3632
+R T+ R K+ F+ P +K + F+ C CQ K +H GLL PL + + AW H
Sbjct: 1038 HSGMRATHHRIKALFYWPGLKKTVEMFIRECPVCQITKVEHIHIPGLLNPLEVLDMAWTH 1097
Query: 3633 ISLDFIEGLPLSNIKNVILVVVDRLTKYSHFYYLCHPFTAMKIAKEFLAHVFKLHGLPSS 3812
I++DFIEGLP S K+ ILVVVDRLTKY+HF L HP++ ++ + F+ ++ +LHG+P +
Sbjct: 1098 ITMDFIEGLPKSKWKDAILVVVDRLTKYAHFLALSHPYSVEQVVEIFMNNIHRLHGMPMA 1157
Query: 3813 IVSDRDKICVIQFWQALFKTLGTTVKLSTSYHPQTYGQTE*TNACVEQYL 3962
I+ DRD+I Q +Q +FK++ ++ STSYHPQT GQTE N C+E YL
Sbjct: 1158 IIIDRDRIFTSQLFQEIFKSMKVQLRFSTSYHPQTDGQTERVNQCLESYL 1207
Score = 108 bits (271), Expect(4) = 0.0
Identities = 59/155 (38%), Positives = 88/155 (56%)
Frame = +1
Query: 3970 MTSSYPKKWANWFPLAEWWFNTNFHSSLKMSPF*SLDGYQPRHLVFLHYLIFYFNSNS*D 4149
MT P +W +W LA WW+NT +H+SL+M+PF +L GY P + +
Sbjct: 1210 MTFQEPHQWYSWLSLAGWWYNTTYHTSLQMTPFQALYGYPPPQI---------------N 1254
Query: 4150 LFARQRHYASTAPR*TVQSSDRMKMFADRKRSDRVFAVGYMVFLKLQPYRKSYVDIRRNF 4329
F+ + ++ A R++R VG MV++KLQPYR++ IR +
Sbjct: 1255 EFSISCNVSAEA------------------RTERSLNVGDMVYIKLQPYRQTAFGIRGSL 1296
Query: 4330 KLSSKYFGPFEVLQRIGVVAYRLKLPIGSCIHPVF 4434
KL SK++GPF+VL++IG VAY+L+LP + IHPVF
Sbjct: 1297 KLRSKFYGPFKVLEKIGQVAYKLQLPEDASIHPVF 1331
Score = 67.0 bits (162), Expect(4) = 0.0
Identities = 33/77 (42%), Positives = 45/77 (58%)
Frame = +3
Query: 4431 FYVSQLKMKIGSTAATLPQLPLVDHNSQFVLEPVSMLQTRFTIMAGLPIQQLLIQWSNSP 4610
F+VSQLK +G A + LP + + Q +PV++LQ R G+ + Q LI W N
Sbjct: 1331 FHVSQLKKHLGQRAVPMSNLPSMGPDGQIKTQPVAVLQRRMIPRNGVAVTQWLILWENLG 1390
Query: 4611 PEDATWEDMAHIQAKFP 4661
P DATWED A IQ+ +P
Sbjct: 1391 PADATWEDAAVIQSMYP 1407
>emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]
Length = 1366
Score = 413 bits (1062), Expect(4) = 0.0
Identities = 206/352 (58%), Positives = 257/352 (73%)
Frame = +1
Query: 1876 VLDSFADVFEEPTALPPSRSLDHRIPLKPDVVPTSQKPYRCPYIQKSIVEELVK*ILTAG 2055
+L+ +++VF EP LPP+R+ DH I L P PYR PY QKS +E +V +L +G
Sbjct: 499 LLNLYSEVFSEPKGLPPTRNHDHHIVLHSGAKPVCVGPYRYPYFQKSKIENIVHEMLQSG 558
Query: 2056 FIQNSHSLFASPILLVKKKDGTLRFCVDYRKLNDQTIKDKYPILLIEELLDEFYGATIFS 2235
++ S S F+SP+LLV+K DG+ R CVDYR LN +TIK K+PI +++ELLDE +G+TIFS
Sbjct: 559 IVRPSQSPFSSPVLLVRKHDGSWRLCVDYRALNKETIKVKFPIPIVDELLDELHGSTIFS 618
Query: 2236 KIDLRSGYH*ILVHAPDIPKTAFHTHHGHFEFLFMPFGLTNAPATFQALMNEIFQPFLHK 2415
K+DLRSGYH I VH DIPKTAF TH GH+EFL MPFGLTNAPATFQ+LMN+IF+P+L K
Sbjct: 619 KLDLRSGYHQIRVHPEDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNDIFKPYLRK 678
Query: 2416 FALVFFDDILVYSSSLADHIIHL*QVFALLRQQSLFSK*SKCSFAHTTLEYLGHLINADG 2595
F LVFFDDILVYS +LADH+ HL V +L+Q LF+K SKC F + +EYLGHLI+ DG
Sbjct: 679 FILVFFDDILVYSKNLADHVYHLQTVLDILKQHQLFAKKSKCCFGCSEIEYLGHLISKDG 738
Query: 2596 VAADPDKISAMEC*PQPQTLKQLRGFLGLTGYYRRFIQGYGNICKTLKYMLKKDDFSWSL 2775
V ADP KI AM P P +LK LRGFLGLTGYYR+FI+GYG I L +LKK+ F W+
Sbjct: 739 VQADPTKIEAMLNWPFPTSLKSLRGFLGLTGYYRKFIKGYGLIAAPLTXLLKKNSFKWTE 798
Query: 2776 DAHVAFSSLKTAMTSTPVFALQDFTKIFVLETDACSRGVGALLMPDDRPIAF 2931
A AF LK A+TS PV AL DF+ F ++ DA GVGA+LM RP+A+
Sbjct: 799 SAKRAFQDLKHAVTSPPVLALPDFSIPFTIQCDASGIGVGAVLMQQGRPLAY 850
Score = 288 bits (736), Expect(4) = 0.0
Identities = 154/349 (44%), Positives = 209/349 (59%), Gaps = 3/349 (0%)
Frame = +3
Query: 2925 SFFQKALGPKALALSTDEKEFLAIVIVVQKWKHYLSSSQFTINTDHQSLKYLIEKRFSTT 3104
++ +A+ KAL LST EKE +A+V+ V+KW+ YL F I TD QSLKYL+E++ T
Sbjct: 849 AYMSQAIHGKALQLSTYEKELMALVLAVKKWRSYLLGHNFKIQTDQQSLKYLLEEKMGTP 908
Query: 3105 LQQRWLLKLMGFDYVIRYKKGSDNIVADVLSRL--PASDSSCHALTLTHPQWTEDLISSY 3278
LQQ+W+ KL+G+++V+ YK+G +N VAD LSR + +A+T W E L +SY
Sbjct: 909 LQQQWITKLLGYEFVVEYKQGKENKVADALSRKMEDQKEGKLYAITAPANTWLEQLRTSY 968
Query: 3279 ESDDLAQQYIAQLLINPI-HQYYSYQHNILRYKGRLYVGSDNEIKXXXXXXXXXXXXXXX 3455
D QQ I L + Q Y + +L YKGRLY+ + E++
Sbjct: 969 AIDPKLQQIIKNLEQGSLASQNYKQRDGLLFYKGRLYIPASKELREQILYLLHSSPQGGH 1028
Query: 3456 XXIRGTYSRAKSHFFLPRMKHDIIEFVSACDTCQFNKGDHSFPSGLLQPLPIPEFAWQHI 3635
T RAKS F+ M+ ++ F+ CD CQ NK ++ P+GLLQPLPIP
Sbjct: 1029 SGFHKTLHRAKSEFYWEGMRKEVRRFIKECDICQQNKSENIHPAGLLQPLPIPT------ 1082
Query: 3636 SLDFIEGLPLSNIKNVILVVVDRLTKYSHFYYLCHPFTAMKIAKEFLAHVFKLHGLPSSI 3815
K+VI+VVVDRL+KY+HF + HP+TA KIA+ FLA++FKLHGLP+SI
Sbjct: 1083 -------------KSVIMVVVDRLSKYAHFIPISHPYTASKIAQVFLANIFKLHGLPNSI 1129
Query: 3816 VSDRDKICVIQFWQALFKTLGTTVKLSTSYHPQTYGQTE*TNACVEQYL 3962
V+DRD FW+ LFK GTT+K S++YHPQT GQTE N VEQYL
Sbjct: 1130 VTDRDPTFTSTFWKELFKLQGTTLKFSSAYHPQTDGQTEIVNKMVEQYL 1178
Score = 124 bits (311), Expect(4) = 0.0
Identities = 64/156 (41%), Positives = 92/156 (58%)
Frame = +1
Query: 3967 CMTSSYPKKWANWFPLAEWWFNTNFHSSLKMSPF*SLDGYQPRHLVFLHYLIFYFNSNS* 4146
C + PK W W PLAEWW+NTN H+S K+SPF S+ GY P L+ + +
Sbjct: 1180 CFSGDKPKGWXKWLPLAEWWYNTNIHASTKLSPFESVYGYPPPKLI-------PYTPGTT 1232
Query: 4147 DLFARQRHYASTAPR*TVQSSDRMKMFADRKRSDRVFAVGYMVFLKLQPYRKSYVDIRRN 4326
L + T+++ D + KR+ R F +G +V+L+LQPY++ V RRN
Sbjct: 1233 QLQEVEN---------TLKTRDEIIRILHIKRTARSFNIGDLVYLRLQPYKQQSVVQRRN 1283
Query: 4327 FKLSSKYFGPFEVLQRIGVVAYRLKLPIGSCIHPVF 4434
KLS +++GP+ VL++IG VAYRL+LP + IHPVF
Sbjct: 1284 LKLSPRFYGPYRVLEKIGTVAYRLELPPEAKIHPVF 1319
Score = 24.3 bits (51), Expect(4) = 0.0
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 4431 FYVSQLKMKIGSTAATLPQLPLVDHNSQFVLEPVSMLQTR 4550
F+VS LK K+G + LP D + EP +L R
Sbjct: 1319 FHVSCLKEKLGERHQLVVTLPPADKDGVIRPEPEEILHRR 1358
Score = 170 bits (430), Expect = 7e-39
Identities = 115/360 (31%), Positives = 191/360 (53%), Gaps = 9/360 (2%)
Frame = +3
Query: 642 WDIFVQDLYARFEDVAHDNYVGSFNKLSQTTSVEEYYDQFEHFKSFMVANNPHLPESFYT 821
W+ FV+ L RF +++ + + +L QT++VE+Y QFE + + L ES+
Sbjct: 117 WEGFVRALQTRFGSSPYEDPMEALIRLKQTSTVEDYKSQFEALSNQLRG----LAESYKL 172
Query: 822 LSFISGLKEEIRPIVQMFNPETTSRSFYLARIQQADVQHNPKPLKPHTK-PFYPTPLSVS 998
F+SGL+E+IR +V+M NP +F LA++Q+ N L+ K PT L++
Sbjct: 173 SCFLSGLREDIRFMVRMLNPSNLHIAFGLAKMQE----ENXAALRRTAKLGSVPTRLAIG 228
Query: 999 HPPSTVKPIFSNSSTYHKQPSXXXXXXXXXXXXXXKSDPPIKRLTPIQMKARRDQGLCYN 1178
P K ++ P++RL+P QMK RRD+GLCYN
Sbjct: 229 PPSPPEK----------------------------RAIVPVQRLSPSQMKERRDKGLCYN 260
Query: 1179 CEEFYRPGHMCRTQQLFMLVAEGENSDNGKVLSDEVQ--RDSPSGSDSPV-----DISLH 1337
C++ + PGH C++ +LF++ E + S + +V EV R S S ++P+ IS+H
Sbjct: 261 CDDKWAPGHKCKSXRLFIM--ECDESSDDEVPKSEVAEGRASKSKEETPIVEIEPGISIH 318
Query: 1338 ALTGNLSHETIRISGHIHKHPILVLIDTGSTHSFIDSQLSDKLNLHVSP-RGRCLL*WPM 1514
AL G+ + +T+R GHI +++L+DTGSTH+F+D + + +L +P G +
Sbjct: 319 ALVGSPNPKTMRFLGHICGRAVVILVDTGSTHNFMDPSVIQRAHLPSNPTEGLSVKVANG 378
Query: 1515 EIPPSIKAFVSTSLGRCRGYHFAHDLRALPLGGCDMVLGADWLRQLGDVQFNFAKLRISF 1694
+ S + + L +G + D L LGGCD+VLG WL+ LG + ++F++L++ F
Sbjct: 379 QAVRSEGSCAAVPL-HMQGNLYTIDFYILTLGGCDIVLGVQWLQTLGPILWDFSRLQMEF 437
>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
Japonica Group]
Length = 866
Score = 338 bits (866), Expect(4) = 0.0
Identities = 166/289 (57%), Positives = 209/289 (72%)
Frame = +1
Query: 2074 SLFASPILLVKKKDGTLRFCVDYRKLNDQTIKDKYPILLIEELLDEFYGATIFSKIDLRS 2253
S ++SP +LVKKKDGT R CVDYR+LN TIK+KYPI +IE+LLDE GA IFSKIDLRS
Sbjct: 2 SPYSSPAILVKKKDGTWRLCVDYRQLNASTIKNKYPIPVIEDLLDELQGAQIFSKIDLRS 61
Query: 2254 GYH*ILVHAPDIPKTAFHTHHGHFEFLFMPFGLTNAPATFQALMNEIFQPFLHKFALVFF 2433
GYH I +HA D+ KTAF TH GHFE+L MPFGLTNAPATFQALMN+I P+L KF LVFF
Sbjct: 62 GYHQIRMHAADVHKTAFSTHLGHFEYLVMPFGLTNAPATFQALMNKILAPYLRKFVLVFF 121
Query: 2434 DDILVYSSSLADHIIHL*QVFALLRQQSLFSK*SKCSFAHTTLEYLGHLINADGVAADPD 2613
DDIL+YS S +H HL V LLR LF+K SKC F +EYLG++I++ GVA DP
Sbjct: 122 DDILIYSKSATEHAQHLSLVLQLLRHHQLFAKPSKCVFGQDQVEYLGYIISSSGVATDPV 181
Query: 2614 KISAMEC*PQPQTLKQLRGFLGLTGYYRRFIQGYGNICKTLKYMLKKDDFSWSLDAHVAF 2793
K+ A++ P P ++ +LRGFLGL GYYRRFI+ +G IC+ + LKK++F W AF
Sbjct: 182 KVQAVQNWPTPTSITELRGFLGLAGYYRRFIKNFGIICRPMFDALKKNNFHWQEVQQQAF 241
Query: 2794 SSLKTAMTSTPVFALQDFTKIFVLETDACSRGVGALLMPDDRPIAFFRK 2940
++K + PV A+ DF+ F+LE DA G+GA+LM + RP+A+ K
Sbjct: 242 DAIKLQLAQAPVLAMPDFSLPFILEADASGHGIGAVLMQNGRPLAYLSK 290
Score = 311 bits (796), Expect(4) = 0.0
Identities = 160/349 (45%), Positives = 217/349 (62%), Gaps = 3/349 (0%)
Frame = +3
Query: 2925 SFFQKALGPKALALSTDEKEFLAIVIVVQKWKHYLSSSQFTINTDHQSLKYLIEKRFSTT 3104
++ KA+GPKA ALST +KE LAI+ ++KWKHY + I TD SLKY+ E+R +
Sbjct: 286 AYLSKAIGPKAAALSTYDKEALAILEALKKWKHYFLGTSLIIRTDQASLKYINEQRITEG 345
Query: 3105 LQQRWLLKLMGFDYVIRYKKGSDNIVADVLSRLPASDSSCHALTLTH--PQWTEDLISSY 3278
+Q + L+KL+ +DY I YKKG +N AD LSR+ +ALT T PQW ++ +SY
Sbjct: 346 VQHKLLIKLLSYDYKIEYKKGQENKAADALSRM----QQLNALTTTVIVPQWITEVAASY 401
Query: 3279 ESDDLAQQYIAQLLINP-IHQYYSYQHNILRYKGRLYVGSDNEIKXXXXXXXXXXXXXXX 3455
+D + + L I P H Y+ + ILRYK + VG+ N ++
Sbjct: 402 STDPKCHELESHLHIAPQSHPPYTLKGGILRYKDHIVVGAGNTLREQLLVSFHDSALGGH 461
Query: 3456 XXIRGTYSRAKSHFFLPRMKHDIIEFVSACDTCQFNKGDHSFPSGLLQPLPIPEFAWQHI 3635
R TY R K F+ P MK + +FV AC CQ NK +H+ P+GLLQPLP+PE AW HI
Sbjct: 462 SGERATYQRMKQLFYWPGMKLAVTQFVKACPVCQKNKTEHNMPAGLLQPLPLPEMAWSHI 521
Query: 3636 SLDFIEGLPLSNIKNVILVVVDRLTKYSHFYYLCHPFTAMKIAKEFLAHVFKLHGLPSSI 3815
++DF+EGLP S K+VI V+VDR TKY+HF L HPFTA +I +FL H +KLHGLP+ I
Sbjct: 522 TMDFVEGLPKSEGKDVIWVIVDRFTKYAHFIPLSHPFTADQILTQFLEHFYKLHGLPTVI 581
Query: 3816 VSDRDKICVIQFWQALFKTLGTTVKLSTSYHPQTYGQTE*TNACVEQYL 3962
VSDRD+I W+ +F+ G + S++YHPQT GQ+E N C+E YL
Sbjct: 582 VSDRDRIFTSSTWKEVFEKAGVKLHFSSAYHPQTDGQSERVNQCLENYL 630
Score = 131 bits (329), Expect(4) = 0.0
Identities = 74/165 (44%), Positives = 96/165 (58%), Gaps = 5/165 (3%)
Frame = +1
Query: 3955 NTYLCMTSSYPKKWANWFPLAEWWFNTNFHSSLKMSPF*SLDGYQPRHLVFLHYLIFYFN 4134
N CMTSS P+KW P AEWW+NT FH+SL MSP+ +L G +P L L
Sbjct: 628 NYLRCMTSSKPRKWKALLPHAEWWYNTTFHTSLGMSPYQALHGIKPPLLAELLLPGSLLE 687
Query: 4135 SNS*DLFARQRHYASTAPR*TVQS-----SDRMKMFADRKRSDRVFAVGYMVFLKLQPYR 4299
R + A A T++S RMK FAD+ R +R VG MV+LK+QPYR
Sbjct: 688 GE------RNKQEAKAALLETIKSHLVKAQARMKYFADQHRQERTLEVGDMVYLKMQPYR 741
Query: 4300 KSYVDIRRNFKLSSKYFGPFEVLQRIGVVAYRLKLPIGSCIHPVF 4434
+ + + + KL S+Y+GPF VL+RIG VAY+L LP+ S IH VF
Sbjct: 742 HNSLGLHSSLKLHSRYYGPFRVLERIGSVAYKLLLPVTSQIHHVF 786
Score = 60.1 bits (144), Expect(4) = 0.0
Identities = 31/77 (40%), Positives = 41/77 (53%)
Frame = +3
Query: 4431 FYVSQLKMKIGSTAATLPQLPLVDHNSQFVLEPVSMLQTRFTIMAGLPIQQLLIQWSNSP 4610
F+VSQLK +GS A LPL+D + + P+++L R P+ Q I W+N P
Sbjct: 786 FHVSQLKKHLGSRAVPEQGLPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKIHWANLP 845
Query: 4611 PEDATWEDMAHIQAKFP 4661
ATWED A I FP
Sbjct: 846 ESAATWEDAAFITKVFP 862
>emb|CAJ00278.1| hypothetical protein [Lotus japonicus]
Length = 1508
Score = 400 bits (1027), Expect(4) = 0.0
Identities = 198/356 (55%), Positives = 254/356 (71%), Gaps = 1/356 (0%)
Frame = +1
Query: 1876 VLDSFADVFEEPTALPPSRSL-DHRIPLKPDVVPTSQKPYRCPYIQKSIVEELVK*ILTA 2052
+L ++DVFEEP LPP R + DH+I LK P S +PYR P QK +++++VK +L +
Sbjct: 564 ILQDYSDVFEEPAQLPPFRGIHDHKIILKDGSNPVSLRPYRYPPAQKDVIDKMVKELLES 623
Query: 2053 GFIQNSHSLFASPILLVKKKDGTLRFCVDYRKLNDQTIKDKYPILLIEELLDEFYGATIF 2232
G IQ S S FASPI+LVKKKDG+ R CVDYRKLND T+K K+PI L+E+LLDE GA IF
Sbjct: 624 GVIQPSSSPFASPIVLVKKKDGSWRMCVDYRKLNDMTVKAKFPIPLVEDLLDELGGAKIF 683
Query: 2233 SKIDLRSGYH*ILVHAPDIPKTAFHTHHGHFEFLFMPFGLTNAPATFQALMNEIFQPFLH 2412
SK+DLR+GYH + + D+ KTAF TH G +E++ MPFGLTNAP+TFQ MN IF PFL
Sbjct: 684 SKLDLRAGYHQLRMRPEDVEKTAFQTHSGQYEYVVMPFGLTNAPSTFQGAMNAIFAPFLR 743
Query: 2413 KFALVFFDDILVYSSSLADHIIHL*QVFALLRQQSLFSK*SKCSFAHTTLEYLGHLINAD 2592
K L+FFDDILVYS+++ H+ HL +VFA+LR+ S + K SKC+F +EYLGH I+A
Sbjct: 744 KSVLIFFDDILVYSATVEAHLQHLREVFAVLRKHSFYVKRSKCAFFTPVIEYLGHFISAS 803
Query: 2593 GVAADPDKISAMEC*PQPQTLKQLRGFLGLTGYYRRFIQGYGNICKTLKYMLKKDDFSWS 2772
GV+ D KI A++ P+P T+KQLRGFLGLTGYYRRFI+GY + L +L+KD F WS
Sbjct: 804 GVSTDSTKIKAIQDWPEPVTIKQLRGFLGLTGYYRRFIKGYSILASPLTDLLRKDGFHWS 863
Query: 2773 LDAHVAFSSLKTAMTSTPVFALQDFTKIFVLETDACSRGVGALLMPDDRPIAFFRK 2940
A AF LK A+ PV A+ D K F +ETDA S G+GA+L+ D P+AF K
Sbjct: 864 AAASAAFLQLKNALVQAPVLAIPDLQKPFTVETDASSTGIGAVLLQDKHPVAFISK 919
Score = 280 bits (717), Expect(4) = 0.0
Identities = 147/347 (42%), Positives = 209/347 (60%), Gaps = 1/347 (0%)
Frame = +3
Query: 2925 SFFQKALGPKALALSTDEKEFLAIVIVVQKWKHYLSSSQFTINTDHQSLKYLIEKRFSTT 3104
+F K L P+ LS ++E LA+V V KW YL+ QFTI TD QSLK+L+E+R ST
Sbjct: 915 AFISKVLSPRNRLLSVYDRELLALVHAVTKWHQYLAIQQFTILTDQQSLKFLLEQRLSTP 974
Query: 3105 LQQRWLLKLMGFDYVIRYKKGSDNIVADVLSRLPASDSSCHALTLTHPQWTEDLISSYES 3284
Q RW+ KLMG YVI+YK+G +N+VAD LSR + +++ + L +Y +
Sbjct: 975 AQYRWVTKLMGLSYVIQYKRGKENVVADALSRASHGELFQLSVSSVSSELWGLLTQAYAA 1034
Query: 3285 DDLAQQYIAQLLINP-IHQYYSYQHNILRYKGRLYVGSDNEIKXXXXXXXXXXXXXXXXX 3461
D+ QQ I+Q+L P +H +YS L K RL + ++++++
Sbjct: 1035 DEALQQLISQVLAQPQLHAHYSVVDGFLFRKHRLMIPNNSQVRTLILEWLHSSHQGGHSG 1094
Query: 3462 IRGTYSRAKSHFFLPRMKHDIIEFVSACDTCQFNKGDHSFPSGLLQPLPIPEFAWQHISL 3641
IR T R KS FF + D+ +F+ C+TC K + GLLQPLPIP WQ I++
Sbjct: 1095 IRATVVRIKSLFFWKGLSKDVADFIQKCETCLRCKYERVASPGLLQPLPIPAGVWQSIAM 1154
Query: 3642 DFIEGLPLSNIKNVILVVVDRLTKYSHFYYLCHPFTAMKIAKEFLAHVFKLHGLPSSIVS 3821
DFI+ LP S+ K+ I VV+DRL+KY+HF L HP+TA +A+ F+ V++LHG PS+IVS
Sbjct: 1155 DFIDKLPKSHGKDAIWVVIDRLSKYAHFIPLTHPYTASTLAEIFIKEVYRLHGAPSNIVS 1214
Query: 3822 DRDKICVIQFWQALFKTLGTTVKLSTSYHPQTYGQTE*TNACVEQYL 3962
DRD + FW A + LG + L+T+YHPQ+ GQ+E N C+E YL
Sbjct: 1215 DRDPLFTSTFWTAFLQQLGISQSLTTAYHPQSDGQSEVLNRCLEHYL 1261
Score = 119 bits (299), Expect(4) = 0.0
Identities = 65/156 (41%), Positives = 92/156 (58%), Gaps = 1/156 (0%)
Frame = +1
Query: 3970 MTSSYPKKWANWFPLAEWWFNTNFHSSLKMSPF*SLDGYQPRHLVFLHYLIFYFNSNS*D 4149
MT PK+W W PLAEWW+NT +HS+++ +P+ + G P + L Y ++ D
Sbjct: 1264 MTWQRPKEWVTWLPLAEWWYNTTYHSAIQTTPYEVVYGQPPA--IHLPYCPQSTIVDAVD 1321
Query: 4150 L-FARQRHYASTAPR*TVQSSDRMKMFADRKRSDRVFAVGYMVFLKLQPYRKSYVDIRRN 4326
F + +++ RMK+ AD+ R+DR F+VG V LKLQPYR+S R +
Sbjct: 1322 RSFTAREQMIQKLHANLMRAQARMKIQADKHRTDREFSVGDWVLLKLQPYRQSSTQHRAS 1381
Query: 4327 FKLSSKYFGPFEVLQRIGVVAYRLKLPIGSCIHPVF 4434
KLS ++FGP++VL R+G VAY L LP S IHP F
Sbjct: 1382 EKLSPRFFGPYQVLHRVGKVAYTLALPPESKIHPTF 1417
Score = 37.4 bits (85), Expect(4) = 0.0
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = +3
Query: 4431 FYVSQLKMKIGSTAATLPQLPLVDHNSQFVLEPVSMLQTRFTIMAGLPIQQLLIQWSNSP 4610
F+VS LK +P LPL N P +L+ R + ++L+QW
Sbjct: 1417 FHVSLLKPCPSPAMPHVP-LPLEWGNLDQPKAPFKILKRRMVQRRHKAVTEVLVQWLGEM 1475
Query: 4611 PEDATWEDMAHIQAKFP 4661
E+ATWE + +++ K+P
Sbjct: 1476 EEEATWEVLYNLKLKYP 1492
Score = 160 bits (405), Expect = 5e-36
Identities = 125/435 (28%), Positives = 199/435 (45%), Gaps = 20/435 (4%)
Frame = +3
Query: 450 SRHPKVDFPHFDGTNPRGWVLKCERYFYLHQLPESERVDMATIHFTSKVDP*FLAYQQGK 629
+R ++DFP F + W+ KCER+F L PE ERV +A+I F +QG
Sbjct: 76 TRLTRLDFPKFSKDDVDSWIAKCERFFALDGTPEGERVAVASIAMDESSFRWFQGLEQGT 135
Query: 630 KC-IPWDIFVQDLYARFEDVAHDNYVGSFNKLSQTTSVEEYYDQFEHFKSFMVANNPHLP 806
+ W F L RF V ++ + +L Q ++EEY++ F++ +A L
Sbjct: 136 VGRVTWPEFAAALRTRF-GVEFESPMEELKRLVQQGNLEEYHEAFDN-----LACRTELS 189
Query: 807 ESFYTLSFISGLKEEIRPIVQMFNPETTSRSFYLARIQQADVQHNPKPLKPHTKPFYPTP 986
ES ++ GL E+ V+MF P T + +A++Q+ ++ K TK +
Sbjct: 190 ESLKLQCYLGGLNPELCTGVKMFGPRTLLEAMRIAKLQERSLELLHKKSNSVTKTYSNWS 249
Query: 987 LSVSHPPSTVKPIFSNSSTYHKQPSXXXXXXXXXXXXXXKSDPPIKRLTPIQMKARRDQG 1166
P TV+ T + K+LTP +M R Q
Sbjct: 250 ERKGVAPVTVEKKAIERKTVRENNQEGILGKPNYTFQ--------KKLTPKEMDEHRTQN 301
Query: 1167 LCYNCEEFYRPGHMC---RTQQLFMLVAEGENSDNGKVLSDEVQRDSPSGSDSPV----- 1322
LC+ C E Y PGH C + Q+F + +G S+ L + V+++S + P
Sbjct: 302 LCFFCHEKYTPGHDCPQRKKSQVFFMAVDGLESEE---LLEGVEQESRPEVNVPKVSLNA 358
Query: 1323 ----DISLHALTGNLSHETIRISGHIHKHPILVLIDTGSTHSFIDSQLSDKLNLHVSPRG 1490
ISL AL G+ + +R++G + K I VLIDTGSTH+FI+ +L + +
Sbjct: 359 LHGDSISLDALDGDSEYPMMRLTGWLGKKRIFVLIDTGSTHNFINQKLCHEGLSKI---- 414
Query: 1491 RCLL*WPMEIPPSIKAFVSTSLGRC-------RGYHFAHDLRALPLGGCDMVLGADWLRQ 1649
+CL P++I + + + G C +GY F + A+PL CD++LG WLRQ
Sbjct: 415 KCLQ--PVKITVADGGIIQGT-GWCEGISWKMQGYTFTDNAIAIPLSSCDLILGMQWLRQ 471
Query: 1650 LGDVQFNFAKLRISF 1694
G + ++F L + F
Sbjct: 472 RGKISWDFTNLIMEF 486
>emb|CAJ00274.1| hypothetical protein [Lotus japonicus]
Length = 1508
Score = 400 bits (1027), Expect(4) = 0.0
Identities = 198/356 (55%), Positives = 254/356 (71%), Gaps = 1/356 (0%)
Frame = +1
Query: 1876 VLDSFADVFEEPTALPPSRSL-DHRIPLKPDVVPTSQKPYRCPYIQKSIVEELVK*ILTA 2052
+L ++DVFEEP LPP R + DH+I LK P S +PYR P QK +++++VK +L +
Sbjct: 564 ILQDYSDVFEEPAQLPPFRGIHDHKIILKDGSNPVSLRPYRYPPAQKDVIDKMVKELLES 623
Query: 2053 GFIQNSHSLFASPILLVKKKDGTLRFCVDYRKLNDQTIKDKYPILLIEELLDEFYGATIF 2232
G IQ S S FASPI+LVKKKDG+ R CVDYRKLND T+K K+PI L+E+LLDE GA IF
Sbjct: 624 GVIQPSSSPFASPIVLVKKKDGSWRMCVDYRKLNDMTVKAKFPIPLVEDLLDELGGAKIF 683
Query: 2233 SKIDLRSGYH*ILVHAPDIPKTAFHTHHGHFEFLFMPFGLTNAPATFQALMNEIFQPFLH 2412
SK+DLR+GYH + + D+ KTAF TH G +E++ MPFGLTNAP+TFQ MN IF PFL
Sbjct: 684 SKLDLRAGYHQLRMRPEDVEKTAFQTHSGQYEYVVMPFGLTNAPSTFQGAMNAIFAPFLR 743
Query: 2413 KFALVFFDDILVYSSSLADHIIHL*QVFALLRQQSLFSK*SKCSFAHTTLEYLGHLINAD 2592
K L+FFDDILVYS+++ H+ HL +VFA+LR+ S + K SKC+F +EYLGH I+A
Sbjct: 744 KSVLIFFDDILVYSATVEAHLQHLREVFAVLRKHSFYVKRSKCAFFTPVIEYLGHFISAS 803
Query: 2593 GVAADPDKISAMEC*PQPQTLKQLRGFLGLTGYYRRFIQGYGNICKTLKYMLKKDDFSWS 2772
GV+ D KI A++ P+P T+KQLRGFLGLTGYYRRFI+GY + L +L+KD F WS
Sbjct: 804 GVSTDSTKIKAIQDWPEPVTIKQLRGFLGLTGYYRRFIKGYSILASPLTDLLRKDGFHWS 863
Query: 2773 LDAHVAFSSLKTAMTSTPVFALQDFTKIFVLETDACSRGVGALLMPDDRPIAFFRK 2940
A AF LK A+ PV A+ D K F +ETDA S G+GA+L+ D P+AF K
Sbjct: 864 AAASAAFLQLKNALVQAPVLAIPDLQKPFTVETDASSTGIGAVLLQDKHPVAFISK 919
Score = 280 bits (716), Expect(4) = 0.0
Identities = 147/347 (42%), Positives = 209/347 (60%), Gaps = 1/347 (0%)
Frame = +3
Query: 2925 SFFQKALGPKALALSTDEKEFLAIVIVVQKWKHYLSSSQFTINTDHQSLKYLIEKRFSTT 3104
+F K L P+ LS ++E LA+V V KW YL+ QFTI TD QSLK+L+E+R ST
Sbjct: 915 AFISKVLSPRNRLLSVYDRELLALVHAVTKWHQYLAIQQFTILTDQQSLKFLLEQRLSTP 974
Query: 3105 LQQRWLLKLMGFDYVIRYKKGSDNIVADVLSRLPASDSSCHALTLTHPQWTEDLISSYES 3284
Q RW+ KLMG YVI+YK+G +N+VAD LSR + +++ + L +Y +
Sbjct: 975 AQYRWVTKLMGLSYVIQYKRGKENVVADALSRASHGELFQLSVSSISSELWGLLTQAYAA 1034
Query: 3285 DDLAQQYIAQLLINP-IHQYYSYQHNILRYKGRLYVGSDNEIKXXXXXXXXXXXXXXXXX 3461
D+ QQ I+Q+L P +H +YS L K RL + ++++++
Sbjct: 1035 DEALQQLISQVLAQPQLHAHYSVVDGFLFRKHRLMIPNNSQVRTLILEWLHSSHQGGHSG 1094
Query: 3462 IRGTYSRAKSHFFLPRMKHDIIEFVSACDTCQFNKGDHSFPSGLLQPLPIPEFAWQHISL 3641
IR T R KS FF + D+ +F+ C+TC K + GLLQPLPIP WQ I++
Sbjct: 1095 IRATVVRIKSLFFWKGLSKDVADFIQKCETCLRCKYERVASPGLLQPLPIPAGVWQSIAM 1154
Query: 3642 DFIEGLPLSNIKNVILVVVDRLTKYSHFYYLCHPFTAMKIAKEFLAHVFKLHGLPSSIVS 3821
DFI+ LP S+ K+ I VV+DRL+KY+HF L HP+TA +A+ F+ V++LHG PS+IVS
Sbjct: 1155 DFIDKLPKSHGKDAIWVVIDRLSKYAHFIPLTHPYTASTLAEIFIKEVYRLHGAPSNIVS 1214
Query: 3822 DRDKICVIQFWQALFKTLGTTVKLSTSYHPQTYGQTE*TNACVEQYL 3962
DRD + FW A + LG + L+T+YHPQ+ GQ+E N C+E YL
Sbjct: 1215 DRDPLFTSTFWTAFLQQLGISQSLTTAYHPQSDGQSEVLNRCLEHYL 1261
Score = 119 bits (298), Expect(4) = 0.0
Identities = 65/156 (41%), Positives = 91/156 (58%), Gaps = 1/156 (0%)
Frame = +1
Query: 3970 MTSSYPKKWANWFPLAEWWFNTNFHSSLKMSPF*SLDGYQPRHLVFLHYLIFYFNSNS*D 4149
MT PK+W W PLAEWW+NT +HS+++ +P+ + G P + L Y + D
Sbjct: 1264 MTWQRPKEWVTWLPLAEWWYNTTYHSAIQTTPYEVVYGQPPA--IHLPYCPQSTIVEAVD 1321
Query: 4150 L-FARQRHYASTAPR*TVQSSDRMKMFADRKRSDRVFAVGYMVFLKLQPYRKSYVDIRRN 4326
F + +++ RMK+ AD+ R+DR F+VG V LKLQPYR+S R +
Sbjct: 1322 RSFTAREQMIQKLHANLMRAQARMKIQADKHRTDREFSVGDWVLLKLQPYRQSSTQHRAS 1381
Query: 4327 FKLSSKYFGPFEVLQRIGVVAYRLKLPIGSCIHPVF 4434
KLS ++FGP++VL R+G VAY L LP S IHP F
Sbjct: 1382 EKLSPRFFGPYQVLHRVGKVAYTLALPPESKIHPTF 1417
Score = 37.7 bits (86), Expect(4) = 0.0
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = +3
Query: 4431 FYVSQLKMKIGSTAATLPQLPLVDHNSQFVLEPVSMLQTRFTIMAGLPIQQLLIQWSNSP 4610
F+VS LK +P LPL N P +L+ R + ++L+QW
Sbjct: 1417 FHVSLLKPCPSPAMPHVP-LPLEWGNLDQPTAPFKILKRRMVQRRHKAVTEVLVQWLGEM 1475
Query: 4611 PEDATWEDMAHIQAKFP 4661
E+ATWE + +++ K+P
Sbjct: 1476 EEEATWEVLYNLKLKYP 1492
Score = 163 bits (412), Expect = 8e-37
Identities = 126/435 (28%), Positives = 200/435 (45%), Gaps = 20/435 (4%)
Frame = +3
Query: 450 SRHPKVDFPHFDGTNPRGWVLKCERYFYLHQLPESERVDMATIHFTSKVDP*FLAYQQGK 629
+R ++DFP F + W+ KCER+F L PE ERV +A+I F +QG
Sbjct: 76 TRLTRLDFPKFSKDDVDSWIAKCERFFALDGTPEGERVAVASIAMDESSFRWFQGLEQGT 135
Query: 630 KC-IPWDIFVQDLYARFEDVAHDNYVGSFNKLSQTTSVEEYYDQFEHFKSFMVANNPHLP 806
+ W F L RF V ++ + +L Q ++EEY++ F++ +A L
Sbjct: 136 VGRVTWPEFAAALRTRF-GVEFESPMEELKRLVQQGNLEEYHEAFDN-----LACRTELS 189
Query: 807 ESFYTLSFISGLKEEIRPIVQMFNPETTSRSFYLARIQQADVQHNPKPLKPHTKPFYPTP 986
ES ++ GL E+ V+MF P T + +A++Q+ ++ K TK +
Sbjct: 190 ESLKLQCYLGGLNPELCTGVKMFGPRTLLEAMRIAKLQERSLELLHKKSNSVTKTYSNWS 249
Query: 987 LSVSHPPSTVKPIFSNSSTYHKQPSXXXXXXXXXXXXXXKSDPPIKRLTPIQMKARRDQG 1166
P TV+ T + K+LTP +M R Q
Sbjct: 250 ERKGVAPVTVEKKAIERKTVRENNQEGILGKPNYTFQ--------KKLTPKEMDEHRTQN 301
Query: 1167 LCYNCEEFYRPGHMC---RTQQLFMLVAEGENSDNGKVLSDEVQRDSPSGSDSPV----- 1322
LC+ C E Y PGH C + Q+F + +G S+ L +EV+++S + P
Sbjct: 302 LCFFCHEKYTPGHDCPQRKKSQVFFMAVDGLESEE---LLEEVEQESRPEVNVPKVSLNA 358
Query: 1323 ----DISLHALTGNLSHETIRISGHIHKHPILVLIDTGSTHSFIDSQLSDKLNLHVSPRG 1490
ISL AL G+ + +R++G + K I VLIDTGSTH+FI+ +L + +
Sbjct: 359 LHGDSISLDALDGDSEYPMMRLTGWLGKKRIFVLIDTGSTHNFINQKLCHEGLSKI---- 414
Query: 1491 RCLL*WPMEIPPSIKAFVSTSLGRC-------RGYHFAHDLRALPLGGCDMVLGADWLRQ 1649
+CL P++I + + + G C +GY F + A+PL CD++LG WLRQ
Sbjct: 415 KCLQ--PVKITVADGGIIQGT-GWCEGISWKMQGYTFTDNAIAIPLSSCDLILGMQWLRQ 471
Query: 1650 LGDVQFNFAKLRISF 1694
G + ++F L + F
Sbjct: 472 RGKISWDFTNLIMEF 486
>ref|XP_007216306.1| hypothetical protein PRUPE_ppa019597mg, partial [Prunus persica]
gi|462412456|gb|EMJ17505.1| hypothetical protein
PRUPE_ppa019597mg, partial [Prunus persica]
Length = 1392
Score = 411 bits (1056), Expect(4) = 0.0
Identities = 204/355 (57%), Positives = 263/355 (74%)
Frame = +1
Query: 1876 VLDSFADVFEEPTALPPSRSLDHRIPLKPDVVPTSQKPYRCPYIQKSIVEELVK*ILTAG 2055
+L F+D+FEE LPPSR++DHRIPL P P + +PYR P+ QK+ +E VK +L AG
Sbjct: 481 LLTPFSDLFEESLGLPPSRAIDHRIPLLPGTGPINVRPYRYPHWQKAEIESQVKAMLQAG 540
Query: 2056 FIQNSHSLFASPILLVKKKDGTLRFCVDYRKLNDQTIKDKYPILLIEELLDEFYGATIFS 2235
I+ S S F+SP+LLV KK+GT RFCVDYR LN T+KDK+PI +I+E+LDE GA FS
Sbjct: 541 IIRRSSSPFSSPVLLVSKKEGTWRFCVDYRALNQVTVKDKFPIPVIDEMLDELNGAAWFS 600
Query: 2236 KIDLRSGYH*ILVHAPDIPKTAFHTHHGHFEFLFMPFGLTNAPATFQALMNEIFQPFLHK 2415
K+DLRSGYH I + DI KTAF TH GH+EFL MPFGL+NAP+TFQALMN+IF+P+L K
Sbjct: 601 KLDLRSGYHQIRMRDADILKTAFRTHEGHYEFLVMPFGLSNAPSTFQALMNDIFRPYLRK 660
Query: 2416 FALVFFDDILVYSSSLADHIIHL*QVFALLRQQSLFSK*SKCSFAHTTLEYLGHLINADG 2595
F LVFFDDILVYS +L +H+ HL VF +LR L K SKC+FA +T++YLGH I+ G
Sbjct: 661 FVLVFFDDILVYSRTLNEHVHHLTTVFEVLRVAQLKMKASKCTFAQSTVDYLGHTISEAG 720
Query: 2596 VAADPDKISAMEC*PQPQTLKQLRGFLGLTGYYRRFIQGYGNICKTLKYMLKKDDFSWSL 2775
V+ D KI ++ P+P+T+K LRGFLGL GYYR+F+ +G I K L +L+KD+F WS
Sbjct: 721 VSVDKKKIQCIDNWPRPETVKGLRGFLGLAGYYRKFVHHFGTISKPLTDLLRKDNFHWSP 780
Query: 2776 DAHVAFSSLKTAMTSTPVFALQDFTKIFVLETDACSRGVGALLMPDDRPIAFFRK 2940
A AF +LKTA+T+TPV L DF+K FV+E+DA + GVGA+L + RPIA+ K
Sbjct: 781 AADSAFQALKTALTTTPVLRLPDFSKQFVVESDASNNGVGAILSQEQRPIAYLSK 835
Score = 253 bits (647), Expect(4) = 0.0
Identities = 137/322 (42%), Positives = 193/322 (59%), Gaps = 3/322 (0%)
Frame = +3
Query: 2925 SFFQKALGPKALALSTDEKEFLAIVIVVQKWKHYLSSSQFTINTDHQSLKYLIEKRFSTT 3104
++ K+L + +LS +KE LA+V+ VQ+W+ YL QF I TDHQ++K+ +E+R +T
Sbjct: 831 AYLSKSLSERHRSLSVYDKEMLAVVLAVQQWRPYLLGRQFKIVTDHQTIKHFLEQRITTP 890
Query: 3105 LQQRWLLKLMGFDYVIRYKKGSDNIVADVLSRLPASDSSCHALTLTHPQW--TEDLISSY 3278
Q++WLLKL+G++Y I Y+ GS N D LSR + L+ P + + +Y
Sbjct: 891 TQEKWLLKLLGYNYEIEYRAGSKNAGPDALSR---KSELLAIMGLSTPIFYCIPQIQQAY 947
Query: 3279 ESDDLAQQYIAQLLINPIHQ-YYSYQHNILRYKGRLYVGSDNEIKXXXXXXXXXXXXXXX 3455
SD AQQ I+ L +P + +YS+Q+N L YK R++V ++ +
Sbjct: 948 TSDSEAQQLISLLQADPTAKPHYSWQNNCLYYKERVFVPVSSQWRTMILEEFHSTPMGGH 1007
Query: 3456 XXIRGTYSRAKSHFFLPRMKHDIIEFVSACDTCQFNKGDHSFPSGLLQPLPIPEFAWQHI 3635
TY R +F PR+K D+ FV+ACDTCQ + P GLLQPLPIP+ WQ I
Sbjct: 1008 SGQLRTYKRILRNFRWPRLKKDVQAFVAACDTCQRQNYEALHPPGLLQPLPIPDSIWQDI 1067
Query: 3636 SLDFIEGLPLSNIKNVILVVVDRLTKYSHFYYLCHPFTAMKIAKEFLAHVFKLHGLPSSI 3815
++DF+EGLP N KN ILVVVDRL+KY HF + HP+TA ++A F+ VFKLHG+P +I
Sbjct: 1068 AMDFVEGLPSVNGKNAILVVVDRLSKYGHFIPIKHPYTASQVADFFICEVFKLHGMPRTI 1127
Query: 3816 VSDRDKICVIQFWQALFKTLGT 3881
VSDRD QFW + F GT
Sbjct: 1128 VSDRDPTFTSQFWTSFFTHQGT 1149
Score = 118 bits (295), Expect(4) = 0.0
Identities = 64/157 (40%), Positives = 91/157 (57%), Gaps = 1/157 (0%)
Frame = +1
Query: 3967 CMTSSYPKKWANWFPLAEWWFNTNFHSSLKMSPF*SLDGYQPRHLVFLHYLIFYFNSNS* 4146
C P W +W P AEWW+NT +HS++KM+P+ ++ G P + F Y +
Sbjct: 1165 CFVGDKPTSWVSWLPWAEWWYNTTYHSAIKMTPYQAVYGQPPPSVEF--YTSGSSAVQAV 1222
Query: 4147 DLFARQRHYASTAPR*TVQ-SSDRMKMFADRKRSDRVFAVGYMVFLKLQPYRKSYVDIRR 4323
DL R R R +Q + +RM FA+ KRS+R F V VFL+LQPYR+S +
Sbjct: 1223 DLALRDRDTLLRRLRQNMQIAQERMTFFANHKRSERHFDVDDWVFLRLQPYRQSTMGTSN 1282
Query: 4324 NFKLSSKYFGPFEVLQRIGVVAYRLKLPIGSCIHPVF 4434
KLS +++GP+++L +IG AY+L LP GS IH VF
Sbjct: 1283 CPKLSPRFYGPYKILAKIGERAYKLALPSGSKIHNVF 1319
Score = 53.9 bits (128), Expect(4) = 0.0
Identities = 29/73 (39%), Positives = 38/73 (52%)
Frame = +3
Query: 4431 FYVSQLKMKIGSTAATLPQLPLVDHNSQFVLEPVSMLQTRFTIMAGLPIQQLLIQWSNSP 4610
F+VS LK KIG+ + P LP + +S P +L P+ + LIQWS P
Sbjct: 1319 FHVSLLKKKIGAHLTSSPTLPPLRPDSSVHWTPAKILNRGLFKRRNQPVVRWLIQWSGLP 1378
Query: 4611 PEDATWEDMAHIQ 4649
EDATWED I+
Sbjct: 1379 EEDATWEDATDIE 1391
Score = 64.7 bits (156), Expect = 4e-07
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 7/173 (4%)
Frame = +3
Query: 1176 NCEEFYRPGHMCRTQQLFMLVAEGENSDNGKVLSD-EVQRDSPSGSDSPV----DISLHA 1340
+C+E Y PGH C+ + M+ E E+ +G + ++ + PV I LHA
Sbjct: 248 SCDEAYSPGHRCKQPHILMI--ESESLLDGMIEPTIDISEPTADEEHQPVIEDTTIHLHA 305
Query: 1341 LTGN--LSHETIRISGHIHKHPILVLIDTGSTHSFIDSQLSDKLNLHVSPRGRCLL*WPM 1514
L +R+ G I PI V ID+G+ +F++ ++ +L + + +
Sbjct: 306 LADRKRTRGRAMRLQGSIEGIPIRVFIDSGADRNFLNPNIATQLKTPIDTQKIKKIVVAT 365
Query: 1515 EIPPSIKAFVSTSLGRCRGYHFAHDLRALPLGGCDMVLGADWLRQLGDVQFNF 1673
K V + + + F D L + GCD+VLG +WL LG + ++F
Sbjct: 366 GQSYGTKGMVYAVPVKLQAFEFQGDFCLLSVSGCDLVLGVEWLETLGLIGWHF 418
>gb|ABF94845.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 937
Score = 359 bits (922), Expect(4) = 0.0
Identities = 179/319 (56%), Positives = 229/319 (71%)
Frame = +1
Query: 1984 KPYRCPYIQKSIVEELVK*ILTAGFIQNSHSLFASPILLVKKKDGTLRFCVDYRKLNDQT 2163
+PYR +QK +E+ VK ++ AG I S S +ASP+LLVKKKDG+ RFCVDYR+LN T
Sbjct: 19 RPYRYSPLQKDEIEKQVKEMIDAGLITPSMSPYASPVLLVKKKDGSWRFCVDYRRLNALT 78
Query: 2164 IKDKYPILLIEELLDEFYGATIFSKIDLRSGYH*ILVHAPDIPKTAFHTHHGHFEFLFMP 2343
IK K+P+ +++ELLDE G FSK+DL++GYH I + D KTAF THHG F+F MP
Sbjct: 79 IKSKFPMPVVDELLDELSGTKFFSKLDLKAGYHQIRMVETDEAKTAFKTHHGQFQFRVMP 138
Query: 2344 FGLTNAPATFQALMNEIFQPFLHKFALVFFDDILVYSSSLADHIIHL*QVFALLRQQSLF 2523
FGLTNAP+TFQ LMN + PF+ KF LVF DDILVYS L H+ HL QVF +LRQ LF
Sbjct: 139 FGLTNAPSTFQCLMNSVLAPFIRKFVLVFMDDILVYSPDLDSHLHHLQQVFVILRQHQLF 198
Query: 2524 SK*SKCSFAHTTLEYLGHLINADGVAADPDKISAMEC*PQPQTLKQLRGFLGLTGYYRRF 2703
++ SKCSFA T LEYLGH+I+ GV+ DP+K +AM P P ++ +LRGFLGLTGYYR+F
Sbjct: 199 ARRSKCSFACTQLEYLGHIISDKGVSTDPEKTAAMLAWPVPTSVTELRGFLGLTGYYRKF 258
Query: 2704 IQGYGNICKTLKYMLKKDDFSWSLDAHVAFSSLKTAMTSTPVFALQDFTKIFVLETDACS 2883
+QGY I + L +LKK F W+ A +AF LKTAM++TP+ AL +F F LETDAC+
Sbjct: 259 VQGYSIIARPLTLLLKKKAFLWTDAAQLAFDQLKTAMSNTPMLALPNFQLPFTLETDACA 318
Query: 2884 RGVGALLMPDDRPIAFFRK 2940
G+GA+L PIA++ K
Sbjct: 319 YGLGAVLSQQGHPIAYYSK 337
Score = 293 bits (751), Expect(4) = 0.0
Identities = 159/355 (44%), Positives = 214/355 (60%), Gaps = 1/355 (0%)
Frame = +3
Query: 2925 SFFQKALGPKALALSTDEKEFLAIVIVVQKWKHYLSSSQFTINTDHQSLKYLIEKRFSTT 3104
+++ K LGP LS EKEFLAI++ V KW+ YL F I T H+ L +L ++ T
Sbjct: 333 AYYSKTLGPVNQKLSIYEKEFLAIMMAVDKWRCYLQRGPFIIKTYHKILCHLDDQILGTE 392
Query: 3105 LQQRWLLKLMGFDYVIRYKKGSDNIVADVLSRLPASDSSCHALTLTHPQWTEDLISSYES 3284
LQQ+ + KLMG Y +YK+G +NIVAD LSR+P+S C A ++ P W +++I+SY
Sbjct: 393 LQQKAMTKLMGLQYSFQYKRGVNNIVADALSRMPSSSQFC-AFSVVQPIWIQEMINSYTV 451
Query: 3285 DDLAQQYIAQLLIN-PIHQYYSYQHNILRYKGRLYVGSDNEIKXXXXXXXXXXXXXXXXX 3461
D AQQ +A+L ++ P Q YS I+R++ ++++GS+ +
Sbjct: 452 DPQAQQLLAELAVHSPNSQGYSLTQGIIRFQNKIWIGSNAGLHTKLIQAFHASALGGHSG 511
Query: 3462 IRGTYSRAKSHFFLPRMKHDIIEFVSACDTCQFNKGDHSFPSGLLQPLPIPEFAWQHISL 3641
I TY R K F P +K D+ FV C CQ K +H GLL PLPIP+ AWQ IS+
Sbjct: 512 IAATYHRIKKLFAWPGLKLDVENFVKQCQVCQQAKHEHCRLPGLLAPLPIPKEAWQDISM 571
Query: 3642 DFIEGLPLSNIKNVILVVVDRLTKYSHFYYLCHPFTAMKIAKEFLAHVFKLHGLPSSIVS 3821
DFIEGLP S+ N ILVVVDR TKY++F L HPFTA ++A VFK HG+P SIVS
Sbjct: 572 DFIEGLPRSDGYNAILVVVDRFTKYANFIPLRHPFTASQVAHLVDKTVFKTHGIPRSIVS 631
Query: 3822 DRDKICVIQFWQALFKTLGTTVKLSTSYHPQTYGQTE*TNACVEQYLPLHDQFIP 3986
DRD++ +FW LF T T +++ST+YHPQT GQ E N C+E YL Q P
Sbjct: 632 DRDRLFTSKFWTTLFATWDTQLQMSTAYHPQTDGQIERVNQCLEMYLRCMTQANP 686
Score = 134 bits (337), Expect(4) = 0.0
Identities = 74/156 (47%), Positives = 97/156 (62%)
Frame = +1
Query: 3967 CMTSSYPKKWANWFPLAEWWFNTNFHSSLKMSPF*SLDGYQPRHLVFLHYLIFYFNSNS* 4146
CMT + PKKW++W LAE+W+NTN+H+ L SP +L G P H + L +
Sbjct: 680 CMTQANPKKWSHWIHLAEFWYNTNYHTYLGCSPHKALFGVDP-HYSQVPDLTLATLPDVV 738
Query: 4147 DLFARQRHYASTAPR*TVQSSDRMKMFADRKRSDRVFAVGYMVFLKLQPYRKSYVDIRRN 4326
D+ ++H + + ++ RMK D+ RSDRVFAVG VFLKLQPY +S V R
Sbjct: 739 DVQTERQHLSEFLQQQLTRAQLRMKNKVDKGRSDRVFAVGDAVFLKLQPYAQSSVVNRPY 798
Query: 4327 FKLSSKYFGPFEVLQRIGVVAYRLKLPIGSCIHPVF 4434
KL+ K+FGPF VL+RIGV AYRL LP S +HPVF
Sbjct: 799 PKLAYKFFGPFTVLERIGVAAYRLDLPASSTVHPVF 834
Score = 48.5 bits (114), Expect(4) = 0.0
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Frame = +3
Query: 4431 FYVSQLKMKIGSTAATLPQLPLVDHNSQFVLE-----PVSMLQTRFTIMAGLPIQQLLIQ 4595
F+VSQLK ++ LP SQ VL+ P ++L+ R + Q+L++
Sbjct: 834 FHVSQLKAQVPDHTPVYTSLP-----SQVVLDAADVVPEAILERRLVKRSNAAHVQVLLK 888
Query: 4596 WSNSPPEDATWEDMAHIQAKFPD 4664
WS+ P + ATWED ++ +FPD
Sbjct: 889 WSSLPADHATWEDYHVVKTRFPD 911
>emb|CAJ00277.1| hypothetical protein [Lotus japonicus]
Length = 1508
Score = 398 bits (1023), Expect(4) = 0.0
Identities = 198/356 (55%), Positives = 253/356 (71%), Gaps = 1/356 (0%)
Frame = +1
Query: 1876 VLDSFADVFEEPTALPPSRSL-DHRIPLKPDVVPTSQKPYRCPYIQKSIVEELVK*ILTA 2052
+L ++DVFEEP LPP R + DH+I LK P S +PYR P QK +++++VK +L +
Sbjct: 564 ILQDYSDVFEEPAQLPPFRGIHDHKIILKEGSNPVSLRPYRYPPAQKDVIDKMVKELLES 623
Query: 2053 GFIQNSHSLFASPILLVKKKDGTLRFCVDYRKLNDQTIKDKYPILLIEELLDEFYGATIF 2232
G IQ S S FASPI+LVKKKDG+ R CVDYRKLND T+K K+PI L+E LLDE GA IF
Sbjct: 624 GVIQPSSSPFASPIVLVKKKDGSWRMCVDYRKLNDMTVKAKFPIPLVEYLLDELGGAKIF 683
Query: 2233 SKIDLRSGYH*ILVHAPDIPKTAFHTHHGHFEFLFMPFGLTNAPATFQALMNEIFQPFLH 2412
SK+DLR+GYH + + D+ KTAF TH G +E++ MPFGLTNAP+TFQ MN IF PFL
Sbjct: 684 SKLDLRAGYHQLRMRPEDVEKTAFQTHSGQYEYVVMPFGLTNAPSTFQGAMNAIFAPFLR 743
Query: 2413 KFALVFFDDILVYSSSLADHIIHL*QVFALLRQQSLFSK*SKCSFAHTTLEYLGHLINAD 2592
K L+FFDDILVYS+++ H+ HL +VFA+LR+ S + K SKC+F +EYLGH I+A
Sbjct: 744 KSVLIFFDDILVYSATVEAHLQHLREVFAVLRKHSFYVKRSKCAFFTPVIEYLGHFISAS 803
Query: 2593 GVAADPDKISAMEC*PQPQTLKQLRGFLGLTGYYRRFIQGYGNICKTLKYMLKKDDFSWS 2772
GV+ D KI A++ P+P T+KQLRGFLGLTGYYRRFI+GY + L +L+KD F WS
Sbjct: 804 GVSTDSTKIKAIQDWPEPVTIKQLRGFLGLTGYYRRFIKGYSILASPLTDLLRKDGFHWS 863
Query: 2773 LDAHVAFSSLKTAMTSTPVFALQDFTKIFVLETDACSRGVGALLMPDDRPIAFFRK 2940
A AF LK A+ PV A+ D K F +ETDA S G+GA+L+ D P+AF K
Sbjct: 864 AAASAAFLQLKNALVQAPVLAIPDLQKPFTVETDASSTGIGAVLLQDKHPVAFISK 919
Score = 280 bits (716), Expect(4) = 0.0
Identities = 147/347 (42%), Positives = 209/347 (60%), Gaps = 1/347 (0%)
Frame = +3
Query: 2925 SFFQKALGPKALALSTDEKEFLAIVIVVQKWKHYLSSSQFTINTDHQSLKYLIEKRFSTT 3104
+F K L P+ LS ++E LA+V V KW YL+ QFTI TD QSLK+L+E+R ST
Sbjct: 915 AFISKVLSPRNRLLSVYDRELLALVHAVTKWHQYLAIQQFTILTDQQSLKFLLEQRLSTP 974
Query: 3105 LQQRWLLKLMGFDYVIRYKKGSDNIVADVLSRLPASDSSCHALTLTHPQWTEDLISSYES 3284
Q RW+ KLMG YVI+YK+G +N+VAD LSR + +++ + L +Y +
Sbjct: 975 AQYRWVTKLMGLSYVIQYKRGKENVVADALSRASHGELFQLSVSSISSELGGLLTQAYAA 1034
Query: 3285 DDLAQQYIAQLLINP-IHQYYSYQHNILRYKGRLYVGSDNEIKXXXXXXXXXXXXXXXXX 3461
D+ QQ I+Q+L P +H +YS L K RL + ++++++
Sbjct: 1035 DEALQQLISQVLAQPQLHAHYSVVDGFLFRKHRLMIPNNSQVRTLILEWLHSSHQGGHSG 1094
Query: 3462 IRGTYSRAKSHFFLPRMKHDIIEFVSACDTCQFNKGDHSFPSGLLQPLPIPEFAWQHISL 3641
IR T R KS FF + D+ +F+ C+TC K + GLLQPLPIP WQ I++
Sbjct: 1095 IRATVVRIKSLFFWKGLSKDVADFIQKCETCLRCKYERVASPGLLQPLPIPAGVWQSIAM 1154
Query: 3642 DFIEGLPLSNIKNVILVVVDRLTKYSHFYYLCHPFTAMKIAKEFLAHVFKLHGLPSSIVS 3821
DFI+ LP S+ K+ I VV+DRL+KY+HF L HP+TA +A+ F+ V++LHG PS+IVS
Sbjct: 1155 DFIDKLPKSHGKDAIWVVIDRLSKYAHFIPLTHPYTASTLAEIFIKEVYRLHGAPSNIVS 1214
Query: 3822 DRDKICVIQFWQALFKTLGTTVKLSTSYHPQTYGQTE*TNACVEQYL 3962
DRD + FW A + LG + L+T+YHPQ+ GQ+E N C+E YL
Sbjct: 1215 DRDPLFTSTFWTAFLQQLGISQSLTTAYHPQSDGQSEVLNRCLEHYL 1261
Score = 119 bits (298), Expect(4) = 0.0
Identities = 65/156 (41%), Positives = 91/156 (58%), Gaps = 1/156 (0%)
Frame = +1
Query: 3970 MTSSYPKKWANWFPLAEWWFNTNFHSSLKMSPF*SLDGYQPRHLVFLHYLIFYFNSNS*D 4149
MT PK+W W PLAEWW+NT +HS+++ +P+ + G P + L Y + D
Sbjct: 1264 MTWQRPKEWVTWLPLAEWWYNTTYHSAIQTTPYEVVYGQPPA--IHLPYCPQSTIVEAVD 1321
Query: 4150 L-FARQRHYASTAPR*TVQSSDRMKMFADRKRSDRVFAVGYMVFLKLQPYRKSYVDIRRN 4326
F + +++ RMK+ AD+ R+DR F+VG V LKLQPYR+S R +
Sbjct: 1322 RSFTAREQMIQKLHANLMRAQARMKIQADKHRTDREFSVGDWVLLKLQPYRQSSTQHRAS 1381
Query: 4327 FKLSSKYFGPFEVLQRIGVVAYRLKLPIGSCIHPVF 4434
KLS ++FGP++VL R+G VAY L LP S IHP F
Sbjct: 1382 EKLSPRFFGPYQVLHRVGKVAYTLALPPESKIHPTF 1417
Score = 37.4 bits (85), Expect(4) = 0.0
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = +3
Query: 4431 FYVSQLKMKIGSTAATLPQLPLVDHNSQFVLEPVSMLQTRFTIMAGLPIQQLLIQWSNSP 4610
F+VS LK +P LPL N P +L+ R + ++L+QW
Sbjct: 1417 FHVSLLKPCPSPAMPHVP-LPLEWGNLDQPKAPFKILKRRMVQRRHKAVTEVLVQWLGEM 1475
Query: 4611 PEDATWEDMAHIQAKFP 4661
E+ATWE + +++ K+P
Sbjct: 1476 EEEATWEVLYNLKLKYP 1492
Score = 163 bits (412), Expect = 8e-37
Identities = 126/435 (28%), Positives = 200/435 (45%), Gaps = 20/435 (4%)
Frame = +3
Query: 450 SRHPKVDFPHFDGTNPRGWVLKCERYFYLHQLPESERVDMATIHFTSKVDP*FLAYQQGK 629
+R ++DFP F + W+ KCER+F L PE ERV +A+I F +QG
Sbjct: 76 TRLTRLDFPKFSKDDVDSWIAKCERFFALDGTPEGERVAVASIAMDESSFRWFQGLEQGT 135
Query: 630 KC-IPWDIFVQDLYARFEDVAHDNYVGSFNKLSQTTSVEEYYDQFEHFKSFMVANNPHLP 806
+ W F L RF V ++ + +L Q ++EEY++ F++ +A L
Sbjct: 136 VGRVTWPEFAAALRTRF-GVEFESPMEELKRLVQQGNLEEYHEAFDN-----LACRTELS 189
Query: 807 ESFYTLSFISGLKEEIRPIVQMFNPETTSRSFYLARIQQADVQHNPKPLKPHTKPFYPTP 986
ES ++ GL E+ V+MF P T + +A++Q+ ++ K TK +
Sbjct: 190 ESLKLQCYLGGLNPELCTGVKMFGPRTLLEAMRIAKLQERSLELLHKKSNSVTKTYSNWS 249
Query: 987 LSVSHPPSTVKPIFSNSSTYHKQPSXXXXXXXXXXXXXXKSDPPIKRLTPIQMKARRDQG 1166
P TV+ T + K+LTP +M R Q
Sbjct: 250 ERKGVAPVTVEKKAIERKTVRENNQEGILGKPNYTFQ--------KKLTPKEMDEHRTQN 301
Query: 1167 LCYNCEEFYRPGHMC---RTQQLFMLVAEGENSDNGKVLSDEVQRDSPSGSDSPV----- 1322
LC+ C E Y PGH C + Q+F + +G S+ L +EV+++S + P
Sbjct: 302 LCFFCHEKYTPGHDCPQRKKSQVFFMAVDGLESEE---LLEEVEQESRPEVNVPKVSLNA 358
Query: 1323 ----DISLHALTGNLSHETIRISGHIHKHPILVLIDTGSTHSFIDSQLSDKLNLHVSPRG 1490
ISL AL G+ + +R++G + K I VLIDTGSTH+FI+ +L + +
Sbjct: 359 LHGDSISLDALDGDSEYPMMRLTGWLGKKRIFVLIDTGSTHNFINQKLCHEGLSKI---- 414
Query: 1491 RCLL*WPMEIPPSIKAFVSTSLGRC-------RGYHFAHDLRALPLGGCDMVLGADWLRQ 1649
+CL P++I + + + G C +GY F + A+PL CD++LG WLRQ
Sbjct: 415 KCLQ--PVKITVADGGIIQGT-GWCEGISWKMQGYTFTDNAIAIPLSSCDLILGMQWLRQ 471
Query: 1650 LGDVQFNFAKLRISF 1694
G + ++F L + F
Sbjct: 472 RGKISWDFTNLIMEF 486
>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
Length = 1583
Score = 396 bits (1018), Expect(4) = 0.0
Identities = 198/355 (55%), Positives = 246/355 (69%)
Frame = +1
Query: 1876 VLDSFADVFEEPTALPPSRSLDHRIPLKPDVVPTSQKPYRCPYIQKSIVEELVK*ILTAG 2055
+L S+ VF P LPP R H I L+ P S +PYR P QK +E+L+ +L AG
Sbjct: 591 LLSSYQQVFNMPLGLPPDRGHVHAINLQHGTNPVSVRPYRYPQSQKDEIEQLIHDMLAAG 650
Query: 2056 FIQNSHSLFASPILLVKKKDGTLRFCVDYRKLNDQTIKDKYPILLIEELLDEFYGATIFS 2235
IQ SHS F+SP+LLVKKKDG+ RFCVDYR LN+ T+ DKYPI +I+ELLDE +GA +FS
Sbjct: 651 IIQQSHSAFSSPVLLVKKKDGSWRFCVDYRALNNVTVPDKYPIPIIDELLDELHGACVFS 710
Query: 2236 KIDLRSGYH*ILVHAPDIPKTAFHTHHGHFEFLFMPFGLTNAPATFQALMNEIFQPFLHK 2415
K+DL+SGYH I + D+ KTAF TH GH+EFL MPFGLTNAPATFQALMNE+F+P+L K
Sbjct: 711 KLDLKSGYHQIKMKPSDVHKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNEVFKPYLRK 770
Query: 2416 FALVFFDDILVYSSSLADHIIHL*QVFALLRQQSLFSK*SKCSFAHTTLEYLGHLINADG 2595
F LVFFDDILVYS+SL H+ HL V LL LF+ KC F + YLGH+I++ G
Sbjct: 771 FVLVFFDDILVYSTSLEQHMHHLNVVLGLLATNHLFANLKKCEFGKEEVAYLGHIISSKG 830
Query: 2596 VAADPDKISAMEC*PQPQTLKQLRGFLGLTGYYRRFIQGYGNICKTLKYMLKKDDFSWSL 2775
VA DP K+ AM P TL++LRGFLGLTGYYRRF++GY +I L LKKD F WS
Sbjct: 831 VAMDPSKVQAMMDWSIPSTLRELRGFLGLTGYYRRFVKGYASIAHPLTNQLKKDSFGWSP 890
Query: 2776 DAHVAFSSLKTAMTSTPVFALQDFTKIFVLETDACSRGVGALLMPDDRPIAFFRK 2940
A AF +LK A+T PV + +F+ FV+E DA G+GA+L+ PIA+F K
Sbjct: 891 AATRAFETLKRALTEAPVLQMPNFSLPFVIEADASGYGLGAVLLQQGHPIAYFSK 945
Score = 271 bits (694), Expect(4) = 0.0
Identities = 147/348 (42%), Positives = 204/348 (58%), Gaps = 2/348 (0%)
Frame = +3
Query: 2925 SFFQKALGPKALALSTDEKEFLAIVIVVQKWKHYLSSSQFTINTDHQSLKYLIEKRFSTT 3104
++F K LG +A A S EKE +A+V+ VQKWKH+L F I++D QSL++L+ +R
Sbjct: 941 AYFSKTLGERARAKSIYEKELMAVVMAVQKWKHFLLGRHFVIHSDQQSLRHLLNQREIGP 1000
Query: 3105 LQQRWLLKLMGFDYVIRYKKGSDNIVADVLSRLPASDSSCHALTLTHPQWTEDLISSYES 3284
Q+W+ KL+GFD+ I+YK G N VAD LSR ++ + LT +H E + +
Sbjct: 1001 AYQKWVGKLLGFDFEIKYKPGGHNKVADALSRKHPPEAEYNLLTSSHSPHQELIAQAIRQ 1060
Query: 3285 DDLAQQYIAQLLIN--PIHQYYSYQHNILRYKGRLYVGSDNEIKXXXXXXXXXXXXXXXX 3458
D Q +A++ P+ Q ++ +H +L+Y GRL + + +
Sbjct: 1061 DADLQHLMAEVTAGRTPL-QGFTVEHGLLKYNGRLVIPKNVPLTTTLLEEYHSSPMGGHS 1119
Query: 3459 XIRGTYSRAKSHFFLPRMKHDIIEFVSACDTCQFNKGDHSFPSGLLQPLPIPEFAWQHIS 3638
I TY R ++ MK D+ FV C CQ K P+GLLQPLPIP W+ IS
Sbjct: 1120 GIFKTYKRLAGEWYWKGMKKDVTTFVQNCQICQQFKTSTLSPAGLLQPLPIPLAIWEDIS 1179
Query: 3639 LDFIEGLPLSNIKNVILVVVDRLTKYSHFYYLCHPFTAMKIAKEFLAHVFKLHGLPSSIV 3818
+DF+EGLP S + ILVVVDRL+KY+HF L HPFTA +A F+ + KLHG PS+IV
Sbjct: 1180 MDFVEGLPKSQGWDTILVVVDRLSKYAHFITLKHPFTAPTVAAVFIKEIVKLHGFPSTIV 1239
Query: 3819 SDRDKICVIQFWQALFKTLGTTVKLSTSYHPQTYGQTE*TNACVEQYL 3962
SDRDK+ + FW+ LFK GT + ST+YHPQ+ GQTE N +E YL
Sbjct: 1240 SDRDKVFMSLFWKELFKLQGTLLHRSTAYHPQSDGQTEVVNKSLEAYL 1287
Score = 105 bits (262), Expect(4) = 0.0
Identities = 59/162 (36%), Positives = 88/162 (54%), Gaps = 6/162 (3%)
Frame = +1
Query: 3967 CMTSSYPKKWANWFPLAEWWFNTNFHSSLKMSPF*SLDGYQPRHLVFLHYLIFYFNSNS* 4146
C + PK WA W AE+W+NT+ HSS +PF + G L F F S
Sbjct: 1289 CFCNGRPKAWAQWISWAEYWYNTSTHSSSHFTPFKIVYGRDSPPL-------FRFEKGST 1341
Query: 4147 DLFARQRHYASTAPR*T------VQSSDRMKMFADRKRSDRVFAVGYMVFLKLQPYRKSY 4308
+F+ + +++ + MK+ D+ R F G MV+LK+QPYR
Sbjct: 1342 AIFSLEEQLLDRDATLDELKFHLLEAQNSMKIQEDKHRRAVHFEPGAMVYLKIQPYRHQS 1401
Query: 4309 VDIRRNFKLSSKYFGPFEVLQRIGVVAYRLKLPIGSCIHPVF 4434
+ +RN KL+ +++GPF VL+RIG VAY+L+LP+G+ +HPVF
Sbjct: 1402 LAKKRNEKLAPRFYGPFSVLKRIGQVAYQLQLPLGAKLHPVF 1443
Score = 59.7 bits (143), Expect(4) = 0.0
Identities = 31/84 (36%), Positives = 47/84 (55%)
Frame = +3
Query: 4431 FYVSQLKMKIGSTAATLPQLPLVDHNSQFVLEPVSMLQTRFTIMAGLPIQQLLIQWSNSP 4610
F++SQLK +GS ++ P + ++ +P S+L R + ++LI+W N P
Sbjct: 1443 FHISQLKKAVGSLQSSPTIPPQLTNDLVLDAQPESLLNIRSHPQKPAEVTEVLIKWLNLP 1502
Query: 4611 PEDATWEDMAHIQAKFPDLILEDK 4682
+ATWED A A+FPD LEDK
Sbjct: 1503 AFEATWEDAALFNARFPDFHLEDK 1526
Score = 146 bits (368), Expect = 1e-31
Identities = 113/446 (25%), Positives = 194/446 (43%), Gaps = 31/446 (6%)
Frame = +3
Query: 453 RHPKVDFPHFDGTNPRGWVLKCERYFYLHQLPESERVDMATIHFTSKVDP*FLAYQQGKK 632
R K+D P F G NP GW+++ ER+F ++L E E+V+ A + + L YQ +
Sbjct: 98 RAKKLDLPVFSGNNPDGWIIRAERFFQFYRLTEDEKVEAAVVSLDGEA---LLWYQWENR 154
Query: 633 CIP---WDIFVQDLYARFEDVAHDNYVGSFNKLSQTTSVEEYYDQFEHFKSFMVANNPHL 803
P W L RF + A + + Q V EY +F ++A +
Sbjct: 155 RRPIHRWSEMRWMLLRRFRETALGSLQEQWLSHEQEEGVVEYRRKFIE----LLAPLEGI 210
Query: 804 PESFYTLSFISGLKEEIRPIVQMFNPETTSRSFYLARIQQADVQHNPKPLKPHTKPFYP- 980
PES F+S LKEEI+ V++ P + + LA + + H PK Y
Sbjct: 211 PESIAQAQFVSKLKEEIKNEVRIMGPSSLDHAMELAVQVEEKLNHRPKKKWESKASSYSA 270
Query: 981 -TPLS-VSHPPSTVKPIFS---------------NSSTYHKQPSXXXXXXXXXXXXXXKS 1109
P S + P + KP +S + ++H S K
Sbjct: 271 HNPNSYIPKPTLSAKPTYSFNYPTQTHNTPYNQFPAPSHHSSTSINSPNKPKTTLPIAKP 330
Query: 1110 DPPIKRLTPIQMKARRDQGLCYNCEEFYRPGHMCRTQQLFMLVAEGENSDNGKVLSDEVQ 1289
I+RL+ +++ +R+ GLC+ C+E + GH C+ ++L +L+ E + L + +Q
Sbjct: 331 FGEIRRLSEKELQYKREHGLCFRCDEKWAIGHRCKKKELSILLGHEEEEEEYGSLMENIQ 390
Query: 1290 RDSPSGSDSPV---DISLHALTGNLSHETIRISGHIHKHPILVLIDTGSTHSFIDSQLSD 1460
P S + +ISL+++ G S +T+++ G I+ ++V++D G+TH+FI
Sbjct: 391 PAHPDDSQLEIHSPEISLNSVMGISSPKTLKMEGTIYGQKVIVMVDPGATHNFISLDTVR 450
Query: 1461 KLNLHVSPRGRCLL*WPMEIPPSIKAFVSTSLGRCR-------GYHFAHDLRALPLGGCD 1619
+L + +S P + A + G C+ G D L LG D
Sbjct: 451 RLQIPISSSR------PFGVSLGTGA-EAHGQGECKAVPLHLQGVCVMEDYLPLTLGNSD 503
Query: 1620 MVLGADWLRQLGDVQFNFAKLRISFQ 1697
++LG WL +LG + N+ + ++
Sbjct: 504 LILGVQWLEKLGTMVTNWKTQTLQYK 529
>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
Length = 2396
Score = 334 bits (857), Expect(4) = 0.0
Identities = 178/356 (50%), Positives = 229/356 (64%), Gaps = 1/356 (0%)
Frame = +1
Query: 1876 VLDSFADVFEEPTALPPSRSLDHRIPLKPDVVPTSQKPYRCPYIQKSIVEELVK*ILTAG 2055
+L F+ VF EP LPPSR DH IPL P S +PYR P K +E+ V+ +L G
Sbjct: 609 LLQQFSSVFAEPQGLPPSRDCDHAIPLVEGAQPVSVRPYRYPPALKDKIEKQVQEMLHQG 668
Query: 2056 FIQNSHSLFASPILLVKKKDGTLRFCVDYRKLNDQTIKDKYPILLIEELLDEFYGATIFS 2235
IQ S+S FASP+LLVKKKD T RFCVDYR LN T+K KYP+ + ++L+DE + FS
Sbjct: 669 VIQKSNSSFASPVLLVKKKDMTWRFCVDYRYLNALTLKSKYPVPVFDQLIDELAHSKWFS 728
Query: 2236 KIDLRSGYH*ILVHAPDIPKTAFHTHHGHFEFLFMPFGLTNAPATFQALMNEIFQPFLHK 2415
K+DLR+GYH IL+ + KTAF TH GH+EF M FGLT AP TF + MNE +P L K
Sbjct: 729 KLDLRAGYHQILLKPGEEYKTAFQTHVGHYEFRVMAFGLTGAPNTFLSAMNETLKPVLRK 788
Query: 2416 FALVFFDDILVYSSSLADHIIHL*QVFALLRQQSLFSK*SKCSFAHTTLEYLGHLINADG 2595
ALVFFDDIL+YS S +H++HL +V LL + K SKC FA T YLGH+I+ G
Sbjct: 789 CALVFFDDILIYSKSFEEHLLHLQKVLQLLLSDNWKVKLSKCEFAKTNTAYLGHIISEQG 848
Query: 2596 VAADPDKISAMEC*PQPQTLKQLRGFLGLTGYYRRFIQGYGNICKTLKYMLKKDD-FSWS 2772
V+ P KI A+ P + K+LR FLGL G+YR+F++ +G I + L +LKK F W+
Sbjct: 849 VSTYPSKIQAISSWAVPTSAKELRCFLGLAGFYRKFVKHFGIISRPLFDLLKKHTLFVWT 908
Query: 2773 LDAHVAFSSLKTAMTSTPVFALQDFTKIFVLETDACSRGVGALLMPDDRPIAFFRK 2940
+D AF LK A+ + PV AL DF++ F + TDA GVGA+LM P+AF K
Sbjct: 909 VDHSKAFEVLKQALVTAPVLALPDFSQPFCIHTDASYYGVGAVLMQSGHPLAFLSK 964
Score = 306 bits (784), Expect(4) = 0.0
Identities = 153/347 (44%), Positives = 218/347 (62%), Gaps = 1/347 (0%)
Frame = +3
Query: 2925 SFFQKALGPKALALSTDEKEFLAIVIVVQKWKHYLSSSQFTINTDHQSLKYLIEKRFSTT 3104
+F KALGPK LST EKE++AI++ + +W+ YL ++F I TDH+SL L E+R T
Sbjct: 960 AFLSKALGPKNQGLSTYEKEYMAIILAIAQWRSYLQLAEFIIYTDHRSLAQLNEQRLHTI 1019
Query: 3105 LQQRWLLKLMGFDYVIRYKKGSDNIVADVLSRLPASDSSCHALTLTHPQWTEDLISSYES 3284
QQ+ KL G Y I Y+KG DN AD LSR DS C A++ + P W ++++ Y+
Sbjct: 1020 WQQKMYTKLAGLQYKIVYRKGVDNGAADALSRKVQEDSHCCAISHSVPTWLQEVVEGYDK 1079
Query: 3285 DDLAQQYIAQLLINPIHQY-YSYQHNILRYKGRLYVGSDNEIKXXXXXXXXXXXXXXXXX 3461
D ++Q +AQL++N + +S I+R+K R+++G + +++
Sbjct: 1080 DPTSKQLLAQLILNSADKAPFSLHQGIIRHKNRIWLGGNLQLQQKVLQAMHDTAVGGHSG 1139
Query: 3462 IRGTYSRAKSHFFLPRMKHDIIEFVSACDTCQFNKGDHSFPSGLLQPLPIPEFAWQHISL 3641
TY + K F+ P M+ D++++V +C CQ +K D + GLLQPL +P AW ISL
Sbjct: 1140 APATYHKVKQMFYWPGMRADVLQYVQSCTVCQQSKPDRAKYPGLLQPLEVPPQAWHTISL 1199
Query: 3642 DFIEGLPLSNIKNVILVVVDRLTKYSHFYYLCHPFTAMKIAKEFLAHVFKLHGLPSSIVS 3821
DFIEGLP S N ILVVVD+ +KY HF L HPFTA K+A+ FL +V+KLHGLP +I+S
Sbjct: 1200 DFIEGLPRSAHYNCILVVVDKFSKYGHFLPLLHPFTAAKVARVFLDNVYKLHGLPVNIIS 1259
Query: 3822 DRDKICVIQFWQALFKTLGTTVKLSTSYHPQTYGQTE*TNACVEQYL 3962
DRD+I FWQ LF+ GT + +S+SYHPQ+ GQTE N C+E +L
Sbjct: 1260 DRDRIFTSSFWQQLFQITGTNLSMSSSYHPQSDGQTERLNQCLETFL 1306
Score = 129 bits (323), Expect(4) = 0.0
Identities = 67/157 (42%), Positives = 97/157 (61%), Gaps = 1/157 (0%)
Frame = +1
Query: 3967 CMTSSYPKKWANWFPLAEWWFNTNFHSSLKMSPF*SLDGYQPRHLVFLHYLIFYFNSNS* 4146
C + P +W+ W +AE+W+NT HS+L +PF L G+ PRH L +
Sbjct: 1308 CYVHTCPSRWSAWLSVAEYWYNTTVHSTLGRTPFEVLYGHTPRHFGILVDTVV--PQPEL 1365
Query: 4147 DLFARQRHYASTAPR*TV-QSSDRMKMFADRKRSDRVFAVGYMVFLKLQPYRKSYVDIRR 4323
+ + ++R + + + ++ DRMK AD++RS+RVF+VG V+LKLQPY +S V R
Sbjct: 1366 ETWLKERELMTKVIKLHLHRAQDRMKRQADKQRSERVFSVGDWVYLKLQPYIQSSVATRS 1425
Query: 4324 NFKLSSKYFGPFEVLQRIGVVAYRLKLPIGSCIHPVF 4434
N KLS K+FGPF++ R+G VAYRL LP S IHP+F
Sbjct: 1426 NHKLSFKFFGPFQITDRLGSVAYRLALPASSSIHPIF 1462
Score = 53.9 bits (128), Expect(4) = 0.0
Identities = 31/84 (36%), Positives = 45/84 (53%)
Frame = +3
Query: 4431 FYVSQLKMKIGSTAATLPQLPLVDHNSQFVLEPVSMLQTRFTIMAGLPIQQLLIQWSNSP 4610
F+VSQLK IG PQLP + + P +LQ RF G I Q+ + WS
Sbjct: 1462 FHVSQLKRVIGRDQRASPQLP---QDVGPIQVPTRILQRRFIDRGGELIAQVKVVWSGMT 1518
Query: 4611 PEDATWEDMAHIQAKFPDLILEDK 4682
+ ATWED+ ++A+FP ++ D+
Sbjct: 1519 EDLATWEDVEALRARFPKALIWDQ 1542
Score = 149 bits (376), Expect = 1e-32
Identities = 107/418 (25%), Positives = 186/418 (44%), Gaps = 11/418 (2%)
Frame = +3
Query: 459 PKVDFPHFDGTNPRGWVLKCERYFYLHQLPESERVDMATIHFTSKVDP*FLAYQQGKKCI 638
P+V+FP FDG NP+ W CE YF ++ + + +AT+HF + + + +
Sbjct: 173 PRVNFPQFDGDNPQLWKTLCENYFDMYDVEPYMWIRVATMHFIGRAASWLQSVGRRVCML 232
Query: 639 PWDIFVQDLYARFEDVAHDNYVGSFNKLSQTTSVEEYYDQFEHFKSFMVANNPHLPESFY 818
W F + L RF H++ + + Q+ +V EY +QF + A + +Y
Sbjct: 233 SWSEFCRQLQDRFGREQHESLIRQLFHIHQSGTVAEYVEQFSILVDHLSAYEANADPLYY 292
Query: 819 TLSFISGLKEEIRPIVQMFNPETTSRSFYLARIQQ----ADVQHNPKPLKPHTKPFYPTP 986
T+ FI GL+++I+ ++ + P + LA +Q+ A +P H P
Sbjct: 293 TMRFIDGLRDDIKAVIMVQRPSNLDTACSLALVQEEATTARRWRRSEPSSSHAGPKTGVQ 352
Query: 987 LSVSHPPSTVKPIFSNSSTYHKQPSXXXXXXXXXXXXXXKSDPPIKRLTPIQMKARRDQG 1166
LS S ++ K ++S K S + RR +G
Sbjct: 353 LSASTKWTSNKDSTQSASHSDKLESL--------------------------RRFRRAKG 386
Query: 1167 LCYNCEEFYRPGHMC-RTQQLFMLVAEGENSDNGKVLSDEVQRDSPSGSDSPVDISLHAL 1343
LC C E + PGH C T QL + + +V ++ P+ V IS A
Sbjct: 387 LCDKCAEKWNPGHKCAATAQLHAMEEVWSLLVDEEVPESDLSPPEPAPEQLFVTISKSAW 446
Query: 1344 TGNLSHETIRISGHIHKHPILVLIDTGSTHSFIDSQLSDKLNLHVSPRGRCLL*WPMEIP 1523
TG+ +T++++G I HP+L+LID+GS+H+F++ QL L +G + +++
Sbjct: 447 TGSTGRQTLKLNGSIQNHPLLILIDSGSSHTFLNDQLRPHL------QGVTSMASTLQVQ 500
Query: 1524 PSIKAFVS------TSLGRCRGYHFAHDLRALPLGGCDMVLGADWLRQLGDVQFNFAK 1679
+ A V+ + + + F D+ LPL DMV+G DWL ++ ++A+
Sbjct: 501 VANGAMVTCHYKLLQAQWQIQNCSFTSDVSFLPLPYYDMVVGMDWLESFSPMRVDWAQ 558
>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
Length = 1631
Score = 395 bits (1016), Expect(4) = 0.0
Identities = 196/351 (55%), Positives = 246/351 (70%)
Frame = +1
Query: 1888 FADVFEEPTALPPSRSLDHRIPLKPDVVPTSQKPYRCPYIQKSIVEELVK*ILTAGFIQN 2067
F VFE P LPP R +H I LK P +PYR P QK +E L+K +L AG IQ
Sbjct: 663 FEGVFETPVGLPPRRGHEHAIVLKEGSNPVGVRPYRYPQFQKDEIERLIKEMLAAGIIQP 722
Query: 2068 SHSLFASPILLVKKKDGTLRFCVDYRKLNDQTIKDKYPILLIEELLDEFYGATIFSKIDL 2247
S S F+SP++LVKKKDG+ RFCVDYR LN +T+ DKYPI +I+ELLDE +GAT+FSK+DL
Sbjct: 723 STSPFSSPVILVKKKDGSWRFCVDYRALNKETVPDKYPIPVIDELLDELHGATVFSKLDL 782
Query: 2248 RSGYH*ILVHAPDIPKTAFHTHHGHFEFLFMPFGLTNAPATFQALMNEIFQPFLHKFALV 2427
R+GYH ILV D KTAF TH GH+EFL MPFGLTNAPATFQ+LMNE+F+PFL +F LV
Sbjct: 783 RAGYHQILVRPEDTHKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNEVFRPFLRRFVLV 842
Query: 2428 FFDDILVYSSSLADHIIHL*QVFALLRQQSLFSK*SKCSFAHTTLEYLGHLINADGVAAD 2607
F DDIL+YS S +H+ HL V +L Q +LF KC F + YLGH+I+ GVA D
Sbjct: 843 FLDDILIYSRSDEEHVGHLEMVLGMLAQHALFVNKKKCEFGKREVAYLGHVISEGGVAMD 902
Query: 2608 PDKISAMEC*PQPQTLKQLRGFLGLTGYYRRFIQGYGNICKTLKYMLKKDDFSWSLDAHV 2787
+K+ A+ P+ L++LRGFLGLTGYYR+F+ Y +I + L LKKD+F WS A
Sbjct: 903 TEKVKAVLEWEVPKNLRELRGFLGLTGYYRKFVANYAHIARPLTEQLKKDNFKWSATATE 962
Query: 2788 AFSSLKTAMTSTPVFALQDFTKIFVLETDACSRGVGALLMPDDRPIAFFRK 2940
AF LK+AM S PV A+ +F FV+ETDA G+GA+LM D+RPIA++ K
Sbjct: 963 AFKQLKSAMVSAPVLAMPNFQLTFVVETDASGYGMGAVLMQDNRPIAYYSK 1013
Score = 256 bits (653), Expect(4) = 0.0
Identities = 139/346 (40%), Positives = 190/346 (54%)
Frame = +3
Query: 2925 SFFQKALGPKALALSTDEKEFLAIVIVVQKWKHYLSSSQFTINTDHQSLKYLIEKRFSTT 3104
+++ K LG +A S EKE +AI VQKWK+YL F + TD QSL+Y+ ++R
Sbjct: 1009 AYYSKLLGTRAQLKSVYEKELMAICFAVQKWKYYLLGRHFVVRTDQQSLRYITQQREIGA 1068
Query: 3105 LQQRWLLKLMGFDYVIRYKKGSDNIVADVLSRLPASDSSCHALTLTHPQWTEDLISSYES 3284
Q+W+ KLMG+D+ I YK G N VAD LSR + A+ +L
Sbjct: 1069 EFQKWVSKLMGYDFEIHYKPGLSNRVADALSRKTVGEVELGAIVAVQGVEWAELRREITG 1128
Query: 3285 DDLAQQYIAQLLINPIHQYYSYQHNILRYKGRLYVGSDNEIKXXXXXXXXXXXXXXXXXI 3464
D Q +L +++ L +KGR + S + I
Sbjct: 1129 DSFLTQVRKELQEGRTPSHFTLVDGNLLFKGRYVIPSSSTIIPKLLYEYHDAPMGGHAGE 1188
Query: 3465 RGTYSRAKSHFFLPRMKHDIIEFVSACDTCQFNKGDHSFPSGLLQPLPIPEFAWQHISLD 3644
TY R + ++ M+ ++ +V C CQ K P GLLQPLPIP W+ IS+D
Sbjct: 1189 LKTYLRLAAEWYWRGMRQEVARYVHQCLICQQQKVSQQHPRGLLQPLPIPSLVWEDISMD 1248
Query: 3645 FIEGLPLSNIKNVILVVVDRLTKYSHFYYLCHPFTAMKIAKEFLAHVFKLHGLPSSIVSD 3824
FIEGLP+S + ILV+VDRL+KY+HF L HPFTA+ +A F+ V +LHG PSSIVSD
Sbjct: 1249 FIEGLPVSKGVDTILVIVDRLSKYAHFLTLRHPFTALMVADLFVKEVVRLHGFPSSIVSD 1308
Query: 3825 RDKICVIQFWQALFKTLGTTVKLSTSYHPQTYGQTE*TNACVEQYL 3962
RD+I + FW+ LF+ GTT+K S++YHPQT GQTE N +E YL
Sbjct: 1309 RDRIFLSLFWKELFRLHGTTLKRSSAYHPQTDGQTEIVNRALETYL 1354
Score = 112 bits (281), Expect(4) = 0.0
Identities = 69/160 (43%), Positives = 90/160 (56%), Gaps = 1/160 (0%)
Frame = +1
Query: 3958 TYL-CMTSSYPKKWANWFPLAEWWFNTNFHSSLKMSPF*SLDGYQPRHLVFLHYLIFYFN 4134
TYL C +P+ WA W P AE+ +NT+ H+S KMSPF L G P H+V
Sbjct: 1352 TYLRCFVGGHPRSWAKWLPWAEFSYNTSPHTSTKMSPFKVLYGRDPPHVVRAPKGQTSVE 1411
Query: 4135 SNS*DLFARQRHYASTAPR*TVQSSDRMKMFADRKRSDRVFAVGYMVFLKLQPYRKSYVD 4314
S L R V++ RMK +AD R++ F VG VFL+LQPYR+ +
Sbjct: 1412 SLEAMLQDRDAIIDDLQVN-LVRAQQRMKHYADGSRTEVEFQVGDAVFLRLQPYRQRSLA 1470
Query: 4315 IRRNFKLSSKYFGPFEVLQRIGVVAYRLKLPIGSCIHPVF 4434
R KL+ +++GPF VLQRIG AY+L+LP S IHPVF
Sbjct: 1471 KRPFEKLAPRFYGPFTVLQRIGATAYKLQLPPSSKIHPVF 1510
Score = 59.3 bits (142), Expect(4) = 0.0
Identities = 31/84 (36%), Positives = 44/84 (52%)
Frame = +3
Query: 4431 FYVSQLKMKIGSTAATLPQLPLVDHNSQFVLEPVSMLQTRFTIMAGLPIQQLLIQWSNSP 4610
F+VS LK +G+T P +D + + V+EP +L R + LI+W P
Sbjct: 1510 FHVSLLKKVVGNTPVLPTIPPHIDVDMELVVEPEELLDVRQIRQGKQTFTECLIKWKGLP 1569
Query: 4611 PEDATWEDMAHIQAKFPDLILEDK 4682
+ATWEDM+ I +FP LEDK
Sbjct: 1570 AFEATWEDMSPIHLRFPSFHLEDK 1593
Score = 144 bits (362), Expect = 5e-31
Identities = 116/445 (26%), Positives = 195/445 (43%), Gaps = 22/445 (4%)
Frame = +3
Query: 429 HREQGKFSRHPKVDFPHFDGTNPRGWVLKCERYFYLHQLPESERVDMATIHFTSKVDP*F 608
H G RH K+D P FD T+P GW+L+ ER+F + L ++E+++ A +
Sbjct: 165 HSGPGGNWRHKKLDMPAFDDTDPDGWILRGERFFAFYGLTDAEKMEAAVVAMEGDA---L 221
Query: 609 LAYQQGKKCIP---WDIFVQDLYARFEDVAHDNYVGSFNKLSQTTSVEEYYDQFEHFKSF 779
YQ K P W+ + +F + + + +QT SV EY +F
Sbjct: 222 RWYQWENKRRPFRNWESMKSFVLTQFRPLNVGSLHEQWLSTTQTASVWEYRRKFVE---- 277
Query: 780 MVANNPHLPESFYTLSFISGLKEEIRPIVQMFNPETTSRSFYLA-RIQQADVQHNPKPLK 956
A +PE FI GL E++ +++ NP ++ LA ++++ + + +
Sbjct: 278 TAAPLDGIPEEILMGKFIHGLNPELQSEIRVLNPYNLDQAMELALKLEERNRVNGARRTG 337
Query: 957 PHTKPFYPTPLSVSHPPSTVKPIFSNSSTYHKQPSXXXXXXXXXXXXXXKSDPPI----- 1121
P + F + PS S + S PP+
Sbjct: 338 PRSGSFSIYNRGPNSNPSLPSVYGSQGGSNASTKSWAINSNASQTSVNNAKPPPLSSRGF 397
Query: 1122 ---KRLTPIQMKARRDQGLCYNCEEFYRPGHMCRTQQLFMLVAEGENSDNGK-VLSDEVQ 1289
+RLT +++ +R +GLC+ C+E + GH CR ++L +L E D + LS
Sbjct: 398 GEMRRLTEKELQEKRAKGLCFKCDEKWGVGHQCRRKELSVLFMEDNEEDELEGALSGSEA 457
Query: 1290 RDSPSGSDSPVDISLHALTGNLSHETIRISGHIHKHPILVLIDTGSTHSFIDSQLSDKLN 1469
SP+ + P ++SL+++ G + +T+++SG I H ++V+ID G+TH+F+ + DKL
Sbjct: 458 PPSPT-EEIPPEVSLNSVIGLSNPKTMKLSGLIDNHEVVVMIDPGATHNFLSLKAIDKLG 516
Query: 1470 LHVSPRGRCLL*WPMEIPPSI-KAFVSTSLGRCR--------GYHFAHDLRALPLGGCDM 1622
+ V+ E S+ G CR G D L LG D+
Sbjct: 517 IPVTE--------SEEFGVSLGDGQAVRGTGICRAVALYLDGGLVVVEDFLPLGLGNSDV 568
Query: 1623 VLGADWLRQLGDVQFNFAKLRISFQ 1697
+LG WL LG V N+ ++SFQ
Sbjct: 569 ILGVQWLETLGTVVSNWKTQKMSFQ 593
>gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1608
Score = 354 bits (909), Expect(4) = 0.0
Identities = 184/356 (51%), Positives = 233/356 (65%), Gaps = 1/356 (0%)
Frame = +1
Query: 1876 VLDSFADVFEEPTALPPSRSLDHRIPLKPDVVPTSQKPYRCPYIQKSIVEELVK*ILTAG 2055
+L+ F ++F EPT LPP R+ DH IPL P + +PYR K +E V +L +G
Sbjct: 607 ILNEFQEIFSEPTELPPKRNCDHHIPLVEGAKPVNLRPYRYKPALKDEIERQVAEMLRSG 666
Query: 2056 FIQNSHSLFASPILLVKKKDGTLRFCVDYRKLNDQTIKDKYPILLIEELLDEFYGATIFS 2235
IQ S S F+SP LLVKKKDGT R C+DYR+LND T+K KYP+ +I+ELLDE G+ FS
Sbjct: 667 VIQPSSSPFSSPALLVKKKDGTWRLCIDYRQLNDVTVKSKYPVPVIDELLDELAGSKWFS 726
Query: 2236 KIDLRSGYH*ILVHAPDIPKTAFHTHHGHFEFLFMPFGLTNAPATFQALMNEIFQPFLHK 2415
K+DLR+GYH I + D KTAF TH GH+E+ M FGLT APATF + MNE P L K
Sbjct: 727 KLDLRAGYHQIRMAEGDEYKTAFQTHSGHYEYKVMSFGLTGAPATFLSAMNETLSPVLRK 786
Query: 2416 FALVFFDDILVYSSSLADHIIHL*QVFALLRQQSLFSK*SKCSFAHTTLEYLGHLINADG 2595
FALVFFDDIL+YS +L H+ H+ V LL K SKCSFA + YLGH+I A G
Sbjct: 787 FALVFFDDILIYSPTLELHLQHVRTVLQLLSAHQWKVKLSKCSFAQQEISYLGHVIGAAG 846
Query: 2596 VAADPDKISAMEC*PQPQTLKQLRGFLGLTGYYRRFIQGYGNICKTLKYMLKKD-DFSWS 2772
VA DP KI + PQP T+K+LRGFLGL GYYR+F++ +G I K L +LKK F W+
Sbjct: 847 VATDPAKIQDVVSWPQPTTIKKLRGFLGLAGYYRKFVRHFGLISKPLTQLLKKGIPFKWT 906
Query: 2773 LDAHVAFSSLKTAMTSTPVFALQDFTKIFVLETDACSRGVGALLMPDDRPIAFFRK 2940
+ AF LK A+ + PV AL DF+K F +ETDA G+GA+L + PIA+ +
Sbjct: 907 PEIESAFQQLKQALVAAPVLALPDFSKHFTIETDASDVGIGAVLSQEKHPIAYLSR 962
Score = 295 bits (755), Expect(4) = 0.0
Identities = 154/347 (44%), Positives = 212/347 (61%), Gaps = 1/347 (0%)
Frame = +3
Query: 2925 SFFQKALGPKALALSTDEKEFLAIVIVVQKWKHYLSSSQFTINTDHQSLKYLIEKRFSTT 3104
++ +ALGPK LST EKE++AI++ V+ W+ YL +F I TDH SL +L E+R T
Sbjct: 958 AYLSRALGPKTRGLSTYEKEYMAIILAVEHWRPYLQQGEFIILTDHHSLMHLTEQRLHTP 1017
Query: 3105 LQQRWLLKLMGFDYVIRYKKGSDNIVADVLSRLPASDSSCHALTLTHPQWTEDLISSYES 3284
QQ+ KL+G Y I Y+KG N AD LSR + S A++ P W ++L+ Y+
Sbjct: 1018 WQQKAFTKLLGLQYKICYRKGVSNAAADALSRRESPISEVAAISECIPSWMQELMQGYQL 1077
Query: 3285 DDLAQQYIAQLLINP-IHQYYSYQHNILRYKGRLYVGSDNEIKXXXXXXXXXXXXXXXXX 3461
D ++Q +A+L I+P + Y IL+YKG+++VG++ ++
Sbjct: 1078 DGQSKQLLAELAISPNSRKDYQLCQGILKYKGKIWVGNNTALQHKLVNELHATPLGGHSG 1137
Query: 3462 IRGTYSRAKSHFFLPRMKHDIIEFVSACDTCQFNKGDHSFPSGLLQPLPIPEFAWQHISL 3641
TY + KS F P MK I E + +C C K D + GLLQPLP+P AWQ ISL
Sbjct: 1138 FPVTYRKVKSLFAWPGMKKLIKEQLQSCQVCLQAKPDRARYPGLLQPLPVPAGAWQTISL 1197
Query: 3642 DFIEGLPLSNIKNVILVVVDRLTKYSHFYYLCHPFTAMKIAKEFLAHVFKLHGLPSSIVS 3821
DFIEGLP S+ N ILVVVD+ +KYSHF L HPF A +A+EF+ +++KLHGLP +I+S
Sbjct: 1198 DFIEGLPRSSHYNCILVVVDKFSKYSHFIPLSHPFNAGGVAQEFMKNIYKLHGLPRAIIS 1257
Query: 3822 DRDKICVIQFWQALFKTLGTTVKLSTSYHPQTYGQTE*TNACVEQYL 3962
DRDKI QFW LF GT + +S++YHPQ+ GQTE N C+E YL
Sbjct: 1258 DRDKIFTSQFWDQLFSKFGTDLHMSSAYHPQSDGQTERVNQCLEIYL 1304
Score = 121 bits (304), Expect(4) = 0.0
Identities = 68/164 (41%), Positives = 92/164 (56%), Gaps = 8/164 (4%)
Frame = +1
Query: 3967 CMTSSYPKKWANWFPLAEWWFNTNFHSSLKMSPF*SLDGYQPRHLVFLHYLIFYFNSNS* 4146
C + P KW++W LAE+W+NT+FHS+L +PF L GY P H F
Sbjct: 1306 CFVHAAPHKWSSWLYLAEFWYNTSFHSTLNKTPFEVLYGYTPSH----------FGIGLD 1355
Query: 4147 DLFARQRHYASTAPR*TVQ--------SSDRMKMFADRKRSDRVFAVGYMVFLKLQPYRK 4302
D H T + Q + +MK AD+KRS R FAVG V+LKLQPY +
Sbjct: 1356 DCQIADLHEWHTERKFMQQLLQQHLNRAQQQMKHQADKKRSFRQFAVGDWVYLKLQPYVQ 1415
Query: 4303 SYVDIRRNFKLSSKYFGPFEVLQRIGVVAYRLKLPIGSCIHPVF 4434
++V R KL+ +Y+GPF+V+ R+G VAY ++LP S IHPVF
Sbjct: 1416 TFVAQRACHKLAFRYYGPFQVMSRVGTVAYHIQLPATSSIHPVF 1459
Score = 48.1 bits (113), Expect(4) = 0.0
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 4431 FYVSQLKMKIGSTAATLPQLPLVDHNSQFVLE-PVSMLQTRFTIMAGLPIQQLLIQWSNS 4607
F+VSQLK +G + +LP S L+ P L R + QLL W +S
Sbjct: 1459 FHVSQLKAAVGFSKKVQDELP----TSLGALQVPFQFLDKRLVKKGNRSVLQLLTHWYHS 1514
Query: 4608 PPEDATWEDMAHIQAKFP 4661
P ++TWEDM + A+FP
Sbjct: 1515 SPSESTWEDMEDLFARFP 1532
Score = 137 bits (344), Expect = 6e-29
Identities = 111/427 (25%), Positives = 186/427 (43%), Gaps = 13/427 (3%)
Frame = +3
Query: 459 PKVDFPHFDGTNPRGWVLKCERYFYLHQLPESERVDMATIHFTSKVDP*FLAYQQGKKCI 638
P + P F+G NP+ W CE YF ++ + V +AT++F + +
Sbjct: 146 PPMSCPQFNGDNPQLWKSNCEVYFDIYGIHPQNWVKIATLNFCGNAAFWLQSVRSQLAGA 205
Query: 639 PWDIFVQDLYARFEDVAHDNYVGSFNKLSQTTSVEEYYDQFEHFKSFMVANNPHLPESFY 818
W + RF + + ++QT+SV +Y D+F+ ++A +++
Sbjct: 206 TWFELCDRVCGRFARDRKQALIRQWIHITQTSSVADYVDRFDSIMHQLMAYGGSNDPAYF 265
Query: 819 TLSFISGLKEEIRPIVQMFNPETTSRSFYLARIQQADVQ--HNPKPLKPHTKPFYPTPLS 992
F+ GLK+ IR +V + P+ + +A +Q+ ++ + K T F T
Sbjct: 266 VTKFVDGLKDHIRVVVMVQRPQDLDSACTVALLQEEALEGVQSVSNKKNETTTFLKT--K 323
Query: 993 VSHPPSTVKPIFSNSSTYHKQPSXXXXXXXXXXXXXXKSDPPIKRLTPIQMKARRDQGLC 1172
SH + P F S P + D +++ ++ RR +GLC
Sbjct: 324 PSH--NLTSPTFQARSI----PFTNIEDKRGVEFSKGRDD----KVSALR-SYRRSKGLC 372
Query: 1173 YNCEEFYRPGHMCRTQQLFMLVAEGENSDNGKVLSDEVQRDSP-SGSDSPVDISLHALTG 1349
+ C E + H C T +V E N+ + +P S DS + IS AL G
Sbjct: 373 FVCGEKWGRDHKCATTVQLHVVEELINALKTDPEENCNSEGAPESEEDSLMAISFQALNG 432
Query: 1350 NLSHETIRISGHIHKHPILVLIDTGSTHSFIDSQLS------DKLNLHVSPRGRCLL*WP 1511
S ++IR+ G + +L+L+D+GSTHSFID++L KLN +
Sbjct: 433 TDSSKSIRLRGWVQNTELLMLVDSGSTHSFIDAKLGAQLCGLQKLNQAIK---------- 482
Query: 1512 MEIPPSIKAFVSTSLGRC----RGYHFAHDLRALPLGGCDMVLGADWLRQLGDVQFNFAK 1679
+++ + F + L C +G+ F D R LPLG D +LG DWL Q +Q ++
Sbjct: 483 VQVADGSQLFCDSFLPNCSWWSQGHSFTSDFRLLPLGSYDAILGMDWLEQFSPMQVDWVH 542
Query: 1680 LRISFQH 1700
I+FQH
Sbjct: 543 KWIAFQH 549